Rh1AG174800

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000095
Physical Location & Seq
Reverse (-)
33502366 .. 33504132
1767 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG174800.1

Sequence Viewer

Length: 1407 bp
ATGAATAAGTATCTGGGTGACCGAATCAGTGAGTTGCCATGTGAAATTCTTGTTAATGTATTATCTCTATTGCCGCTAAAGGAAGCAGCAGCCACGAGTGTTCTTTCTAGGCAATGGCGTTATGTGTGGGAGTCTACTACGAAACTCAACTTTGATGCTAGTAACTATGTAGCCGGTAGTAATGATCAGGGTTTTGTTCTGAATTTCATGCTGTTGGGAGAAAAATTAAAAGATGACAGCATAGATAGTTATGTCAATTGGGTGAATCGTGTTGTGGAACGTCACAGGGGCTCAAAGATTAAACAGTTCAGGGCTTGCTTTTTTCTTGGTTTGCGCTTTTCGACTACCATTGATGAGTGGATTCGATTTGCAGTGGAAAAGAGTGTTGAAATACTTGAACTGGACTTTTCTCCAGGGACTTCGTTCCCTCTGGACTCCAAAAATGCAGTCCCCTGCTATCAAAAAGATGGATTTTCTCAATATTTGTTGTGTCTTGAGAAACTATCTGCTTTGGGACAACAGTGTTCTGACATTCCAAATCGGAGTTCTCGTGTACTCGACATTGGTTTCAAGTCCCTTAAAGTCCTTCACTTGAGAAATGTTGGTGTTACGGGAGAAGCTCTGGAGTATTTCTTGTCTAACTCTCCTGTTCTTGAACGATTATCGGTGACTGTGTCCAAAGATTTGGTTAGTTTGAGAGTCGTTGGTCCGTCAATTGCATTGAAGTATTTGATGATAGAAAATTGTCCTCGCATCAAAAGCGTTGAGATTCGTGACGTGAACATTGTTTTATTTAGTTATATTGGACGTGGTGTGATAGAGTTGCTGCTCAGTAATTTACCGATGCTTGTTGATGTATCTCTTGTTAAGTTGATGTTTATACCTGATTGTATAAATCTTGCTTTCACCCAGCTTTCATGTTATGTTTCTCAGATCCAATTCCTGACCCTGATGTTTCGGGATCTTACATTTCCTAAGTCAGCAAATCTCAAGTATCTGGAACTAATAGTTTGTGCACAGTATGATCGGTCTCTTCATCAGTTATCTTCTTTCTTGAAGGCGTCTCCTTACTTGCCAAGACTTGTATTGAAGTTGGTTTACATGAGACATACAGAGCCCGGAAAAATAAAAGAAGTTATTGGATGCTATCATCATAACCTCAAGGATGTTGAAATAATAGGATATCGTGGTATTACGTGTGCCATTCAGCATGTCAATTACCTTGTAGAAAATGCTGTTGCACTCGAGAAAATTGTTATCAACCCTGCGCAGCTTCGGCGTTTGCCTCCTAGTCTGGATAGGGAAATTGAACAATCTAAAGTGGAAGAAAACGCCAGAGATCATGCAAAGCAGCACCTTATACCAAAACGAAATGTACCTTCAACTGTAGAATTTGTATGCCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

468

Amino Acids

53.26

Weight (kDa)

8.59

Isoelectric Point (pI)

34.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 9 - 45 6.5e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 92 - 465 9.4e-32 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 118 - 243 9.7e-09 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 378 - 420 5.5e-06 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1269
AccI GTMKAC 1 cut(s) 134
AciI CCGC 1 cut(s) 74
AclWI GGATC 2 cut(s) 928, 969
AcsI RAATTY 3 cut(s) 45, 202, 1391
AcyI GRCGYC 1 cut(s) 1061
AfaI GTAC 2 cut(s) 555, 1377
AflIII ACRYGT 1 cut(s) 1196
AjiI CACGTC 2 cut(s) 778, 809
AjnI CCWGG 1 cut(s) 412
AjuI GAANNNNNNNTTGG 2 cut(s) 529, 561
AluBI AGCT 3 cut(s) 620, 913, 1273
AluI AGCT 3 cut(s) 620, 913, 1273
Alw21I GWGCWC 1 cut(s) 1018
Alw26I GTCTC 3 cut(s) 1035, 1068, 1099
Alw44I GTGCAC 1 cut(s) 1014
AlwI GGATC 2 cut(s) 928, 969
Ama87I CYCGRG 1 cut(s) 1244
ApaLI GTGCAC 1 cut(s) 1014
ApeKI GCWGC 5 cut(s) 86, 89, 826, 1270, 1351
ApoI RAATTY 3 cut(s) 45, 202, 1391
ArsI GACNNNNNNTTYG 2 cut(s) 432, 464
AspLEI GCGC 2 cut(s) 336, 1270
AspS9I GGNCC 1 cut(s) 707
AsuC2I CCSGG 1 cut(s) 1119
AsuHPI GGTGA 4 cut(s) 29, 274, 679, 898
AvaI CYCGRG 1 cut(s) 1244
AvaII GGWCC 1 cut(s) 707
BaeGI GKGCMC 1 cut(s) 1018
BanII GRGCYC 2 cut(s) 293, 1119
BarI GAAGNNNNNNTAC 2 cut(s) 1082, 1114
BauI CACGAG 2 cut(s) 94, 549
Bbv12I GWGCWC 1 cut(s) 1018
BbvI GCAGC 5 cut(s) 98, 101, 813, 1282, 1363
BccI CCATC 1 cut(s) 461
BciT130I CCWGG 1 cut(s) 414
BclI TGATCA 1 cut(s) 184
BcnI CCSGG 1 cut(s) 1119
BcoDI GTCTC 3 cut(s) 1035, 1068, 1099
BfaI CTAG 3 cut(s) 108, 159, 1290
BfmI CTRYAG 1 cut(s) 1386
BisI GCNGC 6 cut(s) 74, 87, 90, 827, 1271, 1352
BlsI GCNGC 6 cut(s) 75, 88, 91, 828, 1272, 1353
Bme1390I CCNGG 2 cut(s) 414, 1119
Bme18I GGWCC 1 cut(s) 707
BmeT110I CYCGRG 1 cut(s) 1244
BmgBI CACGTC 2 cut(s) 778, 809
BmgT120I GGNCC 1 cut(s) 707
BmrFI CCNGG 2 cut(s) 414, 1119
BmsI GCATC 4 cut(s) 145, 762, 834, 1133
BpmI CTGGAG 2 cut(s) 396, 644
BpuEI CTTGAG 4 cut(s) 515, 613, 974, 1145
BpuMI CCSGG 1 cut(s) 1119
BsaAI YACGTR 1 cut(s) 1197
BsaHI GRCGYC 1 cut(s) 1061
BsaI GGTCTC 1 cut(s) 1035
BsaJI CCNNGG 1 cut(s) 413
BsaXI ACNNNNNCTCC 2 cut(s) 535, 565
Bse118I RCCGGY 1 cut(s) 173
Bse1I ACTGG 1 cut(s) 405
Bse3DI GCAATG 1 cut(s) 119
BseBI CCWGG 1 cut(s) 414
BseDI CCNNGG 1 cut(s) 413
BseGI GGATG 2 cut(s) 1148, 1171
BseMI GCAATG 1 cut(s) 119
BseMII CTCAG 2 cut(s) 844, 944
BseNI ACTGG 1 cut(s) 405
BseSI GKGCMC 1 cut(s) 1018
BseXI GCAGC 5 cut(s) 98, 101, 813, 1282, 1363
BseYI CCCAGC 1 cut(s) 909
BsiHKAI GWGCWC 1 cut(s) 1018
BsiHKCI CYCGRG 1 cut(s) 1244
BsiSI CCGG 2 cut(s) 174, 1119
BslFI GGGAC 4 cut(s) 430, 434, 528, 559
BsmAI GTCTC 3 cut(s) 1035, 1068, 1099
BsmBI CGTCTC 1 cut(s) 1068
BsmFI GGGAC 4 cut(s) 430, 434, 528, 559
Bso31I GGTCTC 1 cut(s) 1035
BsoBI CYCGRG 1 cut(s) 1244
Bsp1286I GDGCHC 3 cut(s) 293, 1018, 1119
Bsp143I GATC 5 cut(s) 184, 933, 961, 1024, 1339
BspACI CCGC 1 cut(s) 74
BspCNI CTCAG 2 cut(s) 843, 943
BspPI GGATC 2 cut(s) 928, 969
BspTNI GGTCTC 1 cut(s) 1035
BsrDI GCAATG 1 cut(s) 119
BsrFI RCCGGY 1 cut(s) 173
BsrI ACTGG 1 cut(s) 405
BssAI RCCGGY 1 cut(s) 173
BssECI CCNNGG 1 cut(s) 413
BssMI GATC 5 cut(s) 184, 933, 961, 1024, 1339
BssNI GRCGYC 1 cut(s) 1061
BssSI CACGAG 2 cut(s) 94, 549
Bst2BI CACGAG 2 cut(s) 94, 549
Bst2UI CCWGG 1 cut(s) 414
Bst4CI ACNGT 5 cut(s) 306, 522, 673, 1020, 1387
Bst6I CTCTTC 1 cut(s) 1038
BstACI GRCGYC 1 cut(s) 1061
BstBAI YACGTR 1 cut(s) 1197
BstC8I GCNNGC 1 cut(s) 316
BstDEI CTNAG 3 cut(s) 830, 930, 975
BstEII GGTNACC 1 cut(s) 17
BstF5I GGATG 2 cut(s) 1148, 1171
BstHHI GCGC 2 cut(s) 336, 1270
BstKTI GATC 5 cut(s) 187, 936, 964, 1027, 1342
BstMAI GTCTC 3 cut(s) 1035, 1068, 1099
BstMBI GATC 5 cut(s) 184, 933, 961, 1024, 1339
BstMWI GCNNNNNNNGC 2 cut(s) 759, 1276
BstNI CCWGG 1 cut(s) 414
BstNSI RCATGY 1 cut(s) 1214
BstPI GGTNACC 1 cut(s) 17
BstSCI CCNGG 2 cut(s) 412, 1117
BstSFI CTRYAG 1 cut(s) 1386
BstSLI GKGCMC 1 cut(s) 1018
BstV1I GCAGC 5 cut(s) 98, 101, 813, 1282, 1363
BstX2I RGATCY 2 cut(s) 933, 961
BstXI CCANNNNNNTGG 1 cut(s) 685
BstYI RGATCY 2 cut(s) 933, 961
BtrI CACGTC 2 cut(s) 778, 809
BtsCI GGATG 2 cut(s) 1148, 1171
BtsI GCAGTG 1 cut(s) 378
BtsIMutI CAGTG 3 cut(s) 34, 378, 527
Cac8I GCNNGC 1 cut(s) 316
CfoI GCGC 2 cut(s) 336, 1270
Cfr10I RCCGGY 1 cut(s) 173
Cfr13I GGNCC 1 cut(s) 707
CseI GACGC 1 cut(s) 1050
Csp6I GTAC 2 cut(s) 554, 1376
CviAII CATG 6 cut(s) 39, 208, 918, 1102, 1211, 1343
CviJI RGCY 8 cut(s) 92, 173, 291, 314, 620, 913, 1117, 1273
CviKI_1 RGCY 8 cut(s) 92, 173, 291, 314, 620, 913, 1117, 1273
CviQI GTAC 2 cut(s) 554, 1376
DdeI CTNAG 3 cut(s) 830, 930, 975
DpnI GATC 5 cut(s) 186, 935, 963, 1026, 1341
DpnII GATC 5 cut(s) 184, 933, 961, 1024, 1339
Eam1104I CTCTTC 1 cut(s) 1038
EarI CTCTTC 1 cut(s) 1038
Eco24I GRGCYC 2 cut(s) 293, 1119
Eco31I GGTCTC 1 cut(s) 1035
Eco32I GATATC 1 cut(s) 1184
Eco47I GGWCC 1 cut(s) 707
Eco88I CYCGRG 1 cut(s) 1244
Eco91I GGTNACC 1 cut(s) 17
EcoO65I GGTNACC 1 cut(s) 17
EcoRII CCWGG 1 cut(s) 412
EcoRV GATATC 1 cut(s) 1184
EcoT38I GRGCYC 2 cut(s) 293, 1119
Esp3I CGTCTC 1 cut(s) 1068
FaeI CATG 6 cut(s) 42, 211, 921, 1105, 1214, 1346
FaqI GGGAC 4 cut(s) 430, 434, 528, 559
FatI CATG 6 cut(s) 38, 207, 917, 1101, 1210, 1342
FbaI TGATCA 1 cut(s) 184
FblI GTMKAC 1 cut(s) 134
Fnu4HI GCNGC 6 cut(s) 74, 87, 90, 827, 1271, 1352
FokI GGATG 2 cut(s) 1155, 1178
FriOI GRGCYC 2 cut(s) 293, 1119
Fsp4HI GCNGC 6 cut(s) 74, 87, 90, 827, 1271, 1352
FspBI CTAG 3 cut(s) 108, 159, 1290
FspI TGCGCA 1 cut(s) 1269
GlaI GCGC 2 cut(s) 335, 1269
GluI GCNGC 6 cut(s) 74, 87, 90, 827, 1271, 1352
GsaI CCCAGC 1 cut(s) 913
GsuI CTGGAG 2 cut(s) 396, 644
HapII CCGG 2 cut(s) 174, 1119
HgaI GACGC 1 cut(s) 1050
HhaI GCGC 2 cut(s) 336, 1270
Hin1I GRCGYC 1 cut(s) 1061
Hin1II CATG 6 cut(s) 42, 211, 921, 1105, 1214, 1346
Hin6I GCGC 2 cut(s) 334, 1268
HinP1I GCGC 2 cut(s) 334, 1268
HinfI GANTC 7 cut(s) 24, 131, 265, 361, 434, 699, 769
HpaII CCGG 2 cut(s) 174, 1119
HphI GGTGA 4 cut(s) 29, 274, 679, 898
Hpy166II GTNNAC 5 cut(s) 135, 554, 781, 1016, 1099
Hpy188I TCNGA 4 cut(s) 201, 529, 543, 933
Hpy8I GTNNAC 5 cut(s) 135, 554, 781, 1016, 1099
HpyAV CCTTC 3 cut(s) 596, 1051, 1389
HpyCH4III ACNGT 5 cut(s) 306, 522, 673, 1020, 1387
HpyCH4IV ACGT 4 cut(s) 280, 777, 808, 1196
HpyCH4V TGCA 6 cut(s) 371, 446, 719, 1016, 1241, 1346
HpyF10VI GCNNNNNNNGC 2 cut(s) 759, 1276
HpyF3I CTNAG 3 cut(s) 830, 930, 975
HpySE526I ACGT 4 cut(s) 280, 777, 808, 1196
Hsp92I GRCGYC 1 cut(s) 1061
Hsp92II CATG 6 cut(s) 42, 211, 921, 1105, 1214, 1346
HspAI GCGC 2 cut(s) 334, 1268
Ksp22I TGATCA 1 cut(s) 184
Kzo9I GATC 5 cut(s) 184, 933, 961, 1024, 1339
Lsp1109I GCAGC 5 cut(s) 98, 101, 813, 1282, 1363
LweI GCATC 4 cut(s) 145, 762, 834, 1133
MaeI CTAG 3 cut(s) 108, 159, 1290
MaeII ACGT 4 cut(s) 280, 777, 808, 1196
MaeIII GTNAC 6 cut(s) 17, 161, 281, 607, 667, 773
MalI GATC 5 cut(s) 186, 935, 963, 1026, 1341
MboI GATC 5 cut(s) 184, 933, 961, 1024, 1339
MboII GAAGA 3 cut(s) 1025, 1038, 1337
MfeI CAATTG 2 cut(s) 256, 714
MflI RGATCY 2 cut(s) 933, 961
MhlI GDGCHC 3 cut(s) 293, 1018, 1119
MlyI GAGTC 3 cut(s) 140, 428, 708
MnlI CCTC 4 cut(s) 438, 759, 1169, 1296
MseI TTAA 5 cut(s) 54, 227, 300, 579, 867
MspI CCGG 2 cut(s) 174, 1119
MspR9I CCNGG 2 cut(s) 414, 1119
MunI CAATTG 2 cut(s) 256, 714
MvaI CCWGG 1 cut(s) 414
MwoI GCNNNNNNNGC 2 cut(s) 759, 1276
NciI CCSGG 1 cut(s) 1119
NdeII GATC 5 cut(s) 184, 933, 961, 1024, 1339
NlaIII CATG 6 cut(s) 42, 211, 921, 1105, 1214, 1346
NmuCI GTSAC 4 cut(s) 17, 281, 667, 773
NsbI TGCGCA 1 cut(s) 1269
NspI RCATGY 1 cut(s) 1214
PaeR7I CTCGAG 1 cut(s) 1244
PcsI WCGNNNNNNNCGW 1 cut(s) 547
PfeI GAWTC 4 cut(s) 24, 265, 361, 769
PflFI GACNNNGTC 1 cut(s) 673
PkrI GCNGC 6 cut(s) 75, 88, 91, 828, 1272, 1353
PleI GAGTC 3 cut(s) 139, 428, 707
PpsI GAGTC 3 cut(s) 139, 428, 707
Ppu21I YACGTR 1 cut(s) 1197
Psp6I CCWGG 1 cut(s) 412
PspEI GGTNACC 1 cut(s) 17
PspFI CCCAGC 1 cut(s) 909
PspGI CCWGG 1 cut(s) 412
PspPI GGNCC 1 cut(s) 707
PsuI RGATCY 2 cut(s) 933, 961
PsyI GACNNNGTC 1 cut(s) 673
RsaI GTAC 2 cut(s) 555, 1377
RsaNI GTAC 2 cut(s) 554, 1376
SaqAI TTAA 5 cut(s) 54, 227, 300, 579, 867
SatI GCNGC 6 cut(s) 74, 87, 90, 827, 1271, 1352
Sau3AI GATC 5 cut(s) 184, 933, 961, 1024, 1339
Sau96I GGNCC 1 cut(s) 707
SchI GAGTC 3 cut(s) 140, 428, 708
ScrFI CCNGG 2 cut(s) 414, 1119
SduI GDGCHC 3 cut(s) 293, 1018, 1119
SfaNI GCATC 4 cut(s) 145, 762, 834, 1133
SfcI CTRYAG 1 cut(s) 1386
Sfr274I CTCGAG 1 cut(s) 1244
SinI GGWCC 1 cut(s) 707
SlaI CTCGAG 1 cut(s) 1244
SmlI CTYRAG 5 cut(s) 494, 592, 989, 1160, 1244
SmoI CTYRAG 5 cut(s) 494, 592, 989, 1160, 1244
SsiI CCGC 1 cut(s) 74
SspI AATATT 1 cut(s) 482
SspMI CTAG 3 cut(s) 108, 159, 1290
StyD4I CCNGG 2 cut(s) 412, 1117
TaaI ACNGT 5 cut(s) 306, 522, 673, 1020, 1387
TaiI ACGT 4 cut(s) 283, 780, 811, 1199
TaqI TCGA 4 cut(s) 341, 364, 558, 1245
TaqII GACCGA 2 cut(s) 36, 1017
TatI WGTACW 1 cut(s) 553
TauI GCSGC 1 cut(s) 76
TfiI GAWTC 4 cut(s) 24, 265, 361, 769
Tru1I TTAA 5 cut(s) 54, 227, 300, 579, 867
Tru9I TTAA 5 cut(s) 54, 227, 300, 579, 867
TscAI CASTG 3 cut(s) 34, 378, 527
TseFI GTSAC 4 cut(s) 17, 281, 667, 773
TseI GCWGC 5 cut(s) 86, 89, 826, 1270, 1351
Tsp45I GTSAC 4 cut(s) 17, 281, 667, 773
TspDTI ATGAA 4 cut(s) 17, 196, 906, 1025
TspGWI ACGGA 1 cut(s) 699
TspRI CASTG 3 cut(s) 34, 378, 527
Tth111I GACNNNGTC 1 cut(s) 673
VneI GTGCAC 1 cut(s) 1014
VpaK11BI GGWCC 1 cut(s) 707
XapI RAATTY 3 cut(s) 45, 202, 1391
XceI RCATGY 1 cut(s) 1214
XhoI CTCGAG 1 cut(s) 1244
XmiI GTMKAC 1 cut(s) 134
XspI CTAG 3 cut(s) 108, 159, 1290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.