Rorug01G0277600

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000095
Physical Location & Seq
Reverse (-)
39074608 .. 39076062
1455 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0277600.1

Sequence Viewer

Length: 1455 bp
ATGGATACTGCTTTTCCAGTGTGGCTCAGAAGTCAAAAATTCCTCAATTACTTAATTCTTCAGAGCGTCAGAATTTCAGATACAATACCCGATTGGTTTTGGAGATTTTCACCATTTCTTCAGGGTGTGAGTTTATCTCATAACCAGTTAAGAGGAAACCTTCCCAAGTCTGTGAGTTCTCCTCTTCGATTCGTTTTTTTGAATAATAACAGTTTGGTAGGTTCCCTTCCACTTTGGCCAAATGTAACACAACTAAACTTGGCAAGCAATAGATTTTCAGGGCCTATTCCTCTGAACATTGGCCACGAGATGTCAAAGTGCGCGTTTCTTGATCTCTCAAGGAATTATTTCTCTGGAAATATTCCTAGGGATTGGACGGGTTTGCAAGATTTGAAGGTCATAGACTTTTCAAATAACAATCTATCTGGCGAAATCCCAAGCTCCATGTGCTCCCAACTACCATCACTCAAATGGTTGAGATTAAGCAACAACAACCTTTCTGGGAATCTTGAGTCGTCTTTGCAAACTTGCAGAAATCTCTCTGCACTTGATCTGACAGGAAACAACTTTTCCGGCACCATACCAGATTGTATTGGAGAAAACCTTCATACATTGTCTTATTTACTTCTAAAAGCCAACAAGTTCACAGGAAATATTCCTCATCAATTATGCCATCTCTCCTCTCTTCAGGTTTTAGACCTTTCCCAAAATAATATATCTGGCTCCATTCCTGCATGTCTTGGTGGTTTGAAACAAATGACAACAGGAGATGGCTTGCCTGGGAACTGGCTCATGAACTTGACGGTCTATAAGCATCGTTTTGATCCTATGCATATCGACTTAAATGTGAAAGGAGTAGAATATGAATATATTGATGATATCATAGGACTCATTAAAAAGTTTGACCTGTCAAGTAATAATCTATCGGGAGAAATACCAGAAGAGGTGAAAAATCTCATGGCTTTGGGTAGCTTGAACTTATCCCATAACCATTTGACAGGAAAGATACCAGAGGGTATCGGAAGCTTACATAAGTTAGAAGCACTTGACCTCTCTAGTAACCATCTTTGGGGTTTAATTCCTTCAAGCATGACCTCTATGACTTCACTAAGCAAATTGAATTTGTCATTCAACAACTTCTCTGGGCCAATCCCATCAGCCAACCAATTCCCCACCTTCGATCCAACCTCATTTGAAGGAAACTCCGGGCTTTGTGGACCTCCATTGCCAACCCAATGCAGCTCAGTGTCCCATAATGATCCGGCTGCAAAGGTTGACGAAGATGAAGAAGATAAGTATGGAAAATTATGGTTCTATGCAAGCACAGCATTGGGGTTCATTGTAGGATTTTGGGTTGTTTTTGGAAGTTTGGTGATAAAGAGGTCATGGAGACATGCTTACTTCCAGTTTCTTGACAATATGAAAGACAAGCTTTGCTTCTGTTTTTGGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

484

Amino Acids

53.9

Weight (kDa)

6.49

Isoelectric Point (pI)

40.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 110 - 166 4.5e-08 Leucine rich repeat
LRR_14 PF23598 172 - 254 1.1e-06 Leucine-rich repeat region
LRR_8 PF13855 178 - 239 7.6e-07 Leucine rich repeat
LRR_14 PF23598 309 - 375 6.6e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 575
AccII CGCG 1 cut(s) 323
AclWI GGATC 3 cut(s) 818, 1175, 1253
AcoI YGGCCR 2 cut(s) 236, 301
AcsI RAATTY 3 cut(s) 38, 72, 1120
AcuI CTGAAG 3 cut(s) 44, 104, 671
AfiI CCNNNNNNNGG 1 cut(s) 1069
AgsI TTSAA 9 cut(s) 202, 394, 411, 751, 976, 1086, 1120, 1132, 1196
AjnI CCWGG 1 cut(s) 778
AluBI AGCT 5 cut(s) 441, 972, 1026, 1242, 1432
AluI AGCT 5 cut(s) 441, 972, 1026, 1242, 1432
Alw21I GWGCWC 1 cut(s) 452
Alw26I GTCTC 1 cut(s) 1384
AlwI GGATC 3 cut(s) 818, 1175, 1253
AoxI GGCC 4 cut(s) 236, 281, 301, 1145
ApeKI GCWGC 2 cut(s) 1239, 1265
ApoI RAATTY 3 cut(s) 38, 72, 1120
Asp700I GAANNNNTTC 2 cut(s) 347, 603
AspA2I CCTAGG 1 cut(s) 365
AspLEI GCGC 1 cut(s) 323
AspS9I GGNCC 3 cut(s) 281, 1145, 1217
AsuC2I CCSGG 1 cut(s) 1207
AsuHPI GGTGA 3 cut(s) 102, 958, 1384
AvaII GGWCC 1 cut(s) 1217
AvrII CCTAGG 1 cut(s) 365
BalI TGGCCA 2 cut(s) 238, 303
BanI GGYRCC 1 cut(s) 575
BarI GAAGNNNNNNTAC 2 cut(s) 210, 242
BauI CACGAG 1 cut(s) 305
Bbv12I GWGCWC 1 cut(s) 452
BbvI GCAGC 2 cut(s) 1251, 1252
BccI CCATC 5 cut(s) 469, 681, 764, 1071, 1162
BciT130I CCWGG 1 cut(s) 780
BcnI CCSGG 1 cut(s) 1207
BcoDI GTCTC 1 cut(s) 1384
BfaI CTAG 2 cut(s) 366, 1056
BisI GCNGC 2 cut(s) 1240, 1266
BlnI CCTAGG 1 cut(s) 365
BlsI GCNGC 2 cut(s) 1241, 1267
Bme1390I CCNGG 2 cut(s) 780, 1207
Bme18I GGWCC 1 cut(s) 1217
BmgT120I GGNCC 3 cut(s) 281, 1145, 1217
BmiI GGNNCC 3 cut(s) 223, 577, 724
BmrFI CCNGG 2 cut(s) 780, 1207
BmsI GCATC 1 cut(s) 823
BplI GAGNNNNNCTC 4 cut(s) 121, 153, 166, 198
BpuEI CTTGAG 2 cut(s) 322, 530
BpuMI CCSGG 1 cut(s) 1207
BsaJI CCNNGG 2 cut(s) 365, 779
Bsc4I CCNNNNNNNGG 1 cut(s) 1069
Bse1I ACTGG 4 cut(s) 17, 145, 791, 1405
Bse3DI GCAATG 1 cut(s) 1223
BseBI CCWGG 1 cut(s) 780
BseDI CCNNGG 2 cut(s) 365, 779
BseLI CCNNNNNNNGG 1 cut(s) 1069
BseMI GCAATG 1 cut(s) 1223
BseMII CTCAG 2 cut(s) 40, 1257
BseNI ACTGG 4 cut(s) 17, 145, 791, 1405
BseRI GAGGAG 2 cut(s) 171, 670
BseXI GCAGC 2 cut(s) 1251, 1252
BsgI GTGCAG 1 cut(s) 528
Bsh1236I CGCG 1 cut(s) 323
BshFI GGCC 4 cut(s) 238, 283, 303, 1147
BshNI GGYRCC 1 cut(s) 575
BsiHKAI GWGCWC 1 cut(s) 452
BsiSI CCGG 3 cut(s) 573, 1206, 1262
BslFI GGGAC 1 cut(s) 1234
BslI CCNNNNNNNGG 1 cut(s) 1069
BsmAI GTCTC 1 cut(s) 1384
BsmFI GGGAC 1 cut(s) 1234
BsnI GGCC 4 cut(s) 238, 283, 303, 1147
Bsp1286I GDGCHC 1 cut(s) 452
Bsp143I GATC 5 cut(s) 331, 550, 823, 1180, 1258
BspANI GGCC 4 cut(s) 238, 283, 303, 1147
BspCNI CTCAG 2 cut(s) 39, 1256
BspFNI CGCG 1 cut(s) 323
BspHI TCATGA 1 cut(s) 792
BspLI GGNNCC 3 cut(s) 223, 577, 724
BspPI GGATC 3 cut(s) 818, 1175, 1253
BspT107I GGYRCC 1 cut(s) 575
BsrDI GCAATG 1 cut(s) 1223
BsrI ACTGG 4 cut(s) 17, 145, 791, 1405
BssECI CCNNGG 2 cut(s) 365, 779
BssMI GATC 5 cut(s) 331, 550, 823, 1180, 1258
BssSI CACGAG 1 cut(s) 305
BssT1I CCWWGG 1 cut(s) 365
Bst2BI CACGAG 1 cut(s) 305
Bst2UI CCWGG 1 cut(s) 780
Bst4CI ACNGT 2 cut(s) 212, 805
Bst6I CTCTTC 3 cut(s) 189, 690, 936
BstC8I GCNNGC 3 cut(s) 265, 776, 1321
BstDEI CTNAG 3 cut(s) 26, 1109, 1243
BstFNI CGCG 1 cut(s) 323
BstHHI GCGC 1 cut(s) 323
BstKTI GATC 5 cut(s) 334, 553, 826, 1183, 1261
BstMAI GTCTC 1 cut(s) 1384
BstMBI GATC 5 cut(s) 331, 550, 823, 1180, 1258
BstMWI GCNNNNNNNGC 2 cut(s) 447, 1325
BstNI CCWGG 1 cut(s) 780
BstNSI RCATGY 2 cut(s) 738, 1397
BstSCI CCNGG 2 cut(s) 778, 1205
BstUI CGCG 1 cut(s) 323
BstV1I GCAGC 2 cut(s) 1251, 1252
BsuRI GGCC 4 cut(s) 238, 283, 303, 1147
BtsIMutI CAGTG 2 cut(s) 24, 1251
Cac8I GCNNGC 3 cut(s) 265, 776, 1321
CciI TCATGA 1 cut(s) 792
CfoI GCGC 1 cut(s) 323
Cfr13I GGNCC 3 cut(s) 281, 1145, 1217
CseI GACGC 1 cut(s) 55
CviAII CATG 7 cut(s) 445, 735, 793, 958, 1090, 1386, 1394
DdeI CTNAG 3 cut(s) 26, 1109, 1243
DpnI GATC 5 cut(s) 333, 552, 825, 1182, 1260
DpnII GATC 5 cut(s) 331, 550, 823, 1180, 1258
EaeI YGGCCR 2 cut(s) 236, 301
Eam1104I CTCTTC 3 cut(s) 189, 690, 936
EarI CTCTTC 3 cut(s) 189, 690, 936
Eco130I CCWWGG 1 cut(s) 365
Eco32I GATATC 1 cut(s) 880
Eco47I GGWCC 1 cut(s) 1217
Eco57I CTGAAG 3 cut(s) 44, 104, 671
EcoO109I RGGNCCY 1 cut(s) 281
EcoRII CCWGG 1 cut(s) 778
EcoRV GATATC 1 cut(s) 880
EcoT14I CCWWGG 1 cut(s) 365
EcoT22I ATGCAT 1 cut(s) 834
ErhI CCWWGG 1 cut(s) 365
FaeI CATG 7 cut(s) 448, 738, 796, 961, 1093, 1389, 1397
FalI AAGNNNNNCTT 4 cut(s) 1416, 1448, 1421, 1453
FaqI GGGAC 1 cut(s) 1234
FatI CATG 7 cut(s) 444, 734, 792, 957, 1089, 1385, 1393
Fnu4HI GCNGC 2 cut(s) 1240, 1266
Fsp4HI GCNGC 2 cut(s) 1240, 1266
FspBI CTAG 2 cut(s) 366, 1056
GlaI GCGC 1 cut(s) 322
GluI GCNGC 2 cut(s) 1240, 1266
HaeIII GGCC 4 cut(s) 238, 283, 303, 1147
HapII CCGG 3 cut(s) 573, 1206, 1262
HgaI GACGC 1 cut(s) 55
HhaI GCGC 1 cut(s) 323
Hin1II CATG 7 cut(s) 448, 738, 796, 961, 1093, 1389, 1397
Hin6I GCGC 1 cut(s) 321
HinP1I GCGC 1 cut(s) 321
HincII GTYRAC 1 cut(s) 1276
HindII GTYRAC 1 cut(s) 1276
HindIII AAGCTT 2 cut(s) 1024, 1430
HinfI GANTC 4 cut(s) 189, 505, 512, 888
HpaII CCGG 3 cut(s) 573, 1206, 1262
HphI GGTGA 3 cut(s) 102, 958, 1384
Hpy166II GTNNAC 3 cut(s) 645, 1217, 1276
Hpy188I TCNGA 7 cut(s) 29, 63, 71, 79, 294, 555, 1022
Hpy188III TCNNGA 6 cut(s) 329, 354, 509, 793, 927, 1412
Hpy8I GTNNAC 3 cut(s) 645, 1217, 1276
HpyAV CCTTC 7 cut(s) 170, 236, 388, 614, 1092, 1186, 1190
HpyCH4III ACNGT 2 cut(s) 212, 805
HpyCH4V TGCA 9 cut(s) 385, 523, 531, 545, 734, 832, 1239, 1268, 1319
HpyF10VI GCNNNNNNNGC 2 cut(s) 447, 1325
HpyF3I CTNAG 3 cut(s) 26, 1109, 1243
Hsp92II CATG 7 cut(s) 448, 738, 796, 961, 1093, 1389, 1397
HspAI GCGC 1 cut(s) 321
Kzo9I GATC 5 cut(s) 331, 550, 823, 1180, 1258
LmnI GCTCC 3 cut(s) 446, 455, 728
Lsp1109I GCAGC 2 cut(s) 1251, 1252
LweI GCATC 1 cut(s) 823
MaeI CTAG 2 cut(s) 366, 1056
MaeIII GTNAC 2 cut(s) 244, 1058
MalI GATC 5 cut(s) 333, 552, 825, 1182, 1260
MboI GATC 5 cut(s) 331, 550, 823, 1180, 1258
MboII GAAGA 8 cut(s) 50, 110, 176, 677, 953, 1292, 1298, 1301
MhlI GDGCHC 1 cut(s) 452
MlsI TGGCCA 2 cut(s) 238, 303
MluNI TGGCCA 2 cut(s) 238, 303
MlyI GAGTC 2 cut(s) 521, 882
MmeI TCCRAC 1 cut(s) 1208
Mox20I TGGCCA 2 cut(s) 238, 303
Mph1103I ATGCAT 1 cut(s) 834
MroXI GAANNNNTTC 2 cut(s) 347, 603
MscI TGGCCA 2 cut(s) 238, 303
MseI TTAA 6 cut(s) 53, 149, 482, 842, 894, 1076
MslI CAYNNNNRTG 1 cut(s) 469
Msp20I TGGCCA 2 cut(s) 238, 303
MspI CCGG 3 cut(s) 573, 1206, 1262
MspR9I CCNGG 2 cut(s) 780, 1207
MvaI CCWGG 1 cut(s) 780
MvnI CGCG 1 cut(s) 323
MwoI GCNNNNNNNGC 2 cut(s) 447, 1325
NciI CCSGG 1 cut(s) 1207
NdeII GATC 5 cut(s) 331, 550, 823, 1180, 1258
NlaIII CATG 7 cut(s) 448, 738, 796, 961, 1093, 1389, 1397
NlaIV GGNNCC 3 cut(s) 223, 577, 724
NsiI ATGCAT 1 cut(s) 834
NspI RCATGY 2 cut(s) 738, 1397
PagI TCATGA 1 cut(s) 792
PdmI GAANNNNTTC 2 cut(s) 347, 603
PfeI GAWTC 2 cut(s) 189, 505
PkrI GCNGC 2 cut(s) 1241, 1267
PleI GAGTC 2 cut(s) 520, 882
PpsI GAGTC 2 cut(s) 520, 882
Psp6I CCWGG 1 cut(s) 778
PspGI CCWGG 1 cut(s) 778
PspN4I GGNNCC 3 cut(s) 223, 577, 724
PspPI GGNCC 3 cut(s) 281, 1145, 1217
RseI CAYNNNNRTG 1 cut(s) 469
SaqAI TTAA 6 cut(s) 53, 149, 482, 842, 894, 1076
SatI GCNGC 2 cut(s) 1240, 1266
Sau3AI GATC 5 cut(s) 331, 550, 823, 1180, 1258
Sau96I GGNCC 3 cut(s) 281, 1145, 1217
SchI GAGTC 2 cut(s) 521, 882
ScrFI CCNGG 2 cut(s) 780, 1207
SduI GDGCHC 1 cut(s) 452
SfaNI GCATC 1 cut(s) 823
SinI GGWCC 1 cut(s) 1217
SmiMI CAYNNNNRTG 1 cut(s) 469
SmlI CTYRAG 2 cut(s) 337, 509
SmoI CTYRAG 2 cut(s) 337, 509
SspI AATATT 2 cut(s) 361, 655
SspMI CTAG 2 cut(s) 366, 1056
StyD4I CCNGG 2 cut(s) 778, 1205
StyI CCWWGG 1 cut(s) 365
TaaI ACNGT 2 cut(s) 212, 805
TaqI TCGA 3 cut(s) 187, 837, 1179
TfiI GAWTC 2 cut(s) 189, 505
Tru1I TTAA 6 cut(s) 53, 149, 482, 842, 894, 1076
Tru9I TTAA 6 cut(s) 53, 149, 482, 842, 894, 1076
TscAI CASTG 2 cut(s) 24, 1251
TseI GCWGC 2 cut(s) 1239, 1265
TspDTI ATGAA 6 cut(s) 596, 809, 879, 1299, 1327, 1436
TspRI CASTG 2 cut(s) 24, 1251
VpaK11BI GGWCC 1 cut(s) 1217
XapI RAATTY 3 cut(s) 38, 72, 1120
XceI RCATGY 2 cut(s) 738, 1397
XcmI CCANNNNNNNNNTGG 1 cut(s) 468
XmaJI CCTAGG 1 cut(s) 365
XmnI GAANNNNTTC 2 cut(s) 347, 603
XspI CTAG 2 cut(s) 366, 1056
Zsp2I ATGCAT 1 cut(s) 834
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.