Rh3BG022500

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000095
Physical Location & Seq
Reverse (-)
1459214 .. 1463429
4216 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG022500.1

Sequence Viewer

Length: 1551 bp
ATGAAGAACAGGGGATGCCGAACCTCTCAATTCCTCCCTAACAAGAAGCATGAGAAAAGAAGCAAGACAAAGAAAAAAGAAAACTTGGGAAAGAAACAGAAAGATAAGGGTGAGTTCAGCTCTGGGGATCGAAATGGTGGGGTCAGCTATGTGGATAGAATCAGTGACTTGCCGGATGGCATTCTTGTTAGTATCTTGTCTTGCTTGCTTTTCAAGGAAGCAGCAGCTACTAGTGTCCTTTCAACGCGGTGGCGGGATCTGTGGGCATCTACTATGAATCTCAACTTTGAAGATGAGAAAAATTCGAGGGATTTCATGGAAGTGAAGCCAAATATACAACACAGGAAGCGCCGTAGTTTTGTCAGTTTGGTGGATCGCGCGGTGCAACAGCATATGGGTCCATTGATTGAACGGTTCAGGGCTTGCTTTTTTCTAGATCGTCGCTTTGCACGATCCATTGATGGATGGATTGAGTTTGCAATGAAAAAGAGGGTTCAAATACTTGAGCTGGAGTTTTCAGCAGCTAATGTTAAGGATAACTATATATTTCCCCATGAACTACTAGGTCTTGAAACAGGGTCTACTCGAAAGGACTTACATTCTAGCATCCCAAGTCGACACTTTTCTGAATGCAGTATGGGTTTCAAGTCACTAAAAATTCTTAATTTGCGACATGTTAATGTGGATGGAGAAGTTCTTGAGTACTTATTAATGAACTGTCCAGTCGAAAGAATATCAGTGGTGGCAGCCAAAAATCTGGTTGATTTAAGAGTTGTTAGTCCATCCATTGGATGGAAGTATTTGGCAATAGAAAATTGTCCTGACCTCAAAACCATTGAGATCTGTAATGCAGACATTGTTTCATTTACTTACATTGGAGTTGCTATAAACCTGCTTCTGAGTAATGTACCTTTGCTTTCTGAGGTATCCATTACTGAGCTCGAGATTGAGAGCAACAACTTTTTCGATTCTATAACTATATCCGTAGAGCTTCCCTTCACCCAACTCTCATGCTATCTTTCTCAGCTGAAGTATCTCACGATGGATATCAGTGAAGCGGTCTACAATCAGGATTATGTGTTTCCTATATTAGCAAATCTCAAGTATTTGGAATTAATATGTGAACCACATTATGCGTCCTCTCTTCGTTATTTGACTTCTTTCATGAAGGCATCTCCTTACTTGCAGAGACTTGTGTTGAAGATGAATATCATCACATCATGGTTGGAGGAGATGGGAATAGGAAAAACAGACATGGAGGAGATTGTGACAACAGCGCAAATGGAGACTCTTGCCAAATGCCCTCATCATGAGCTCAGAGTAATAGAAATAGTTGGGTATCGTGCTCGTAGATTTGCTGCTAAACATGTCATGCTTTTATTAAAGAATGCTGTTGCACTGGAGAAACTTGTTATTGATCCTGTCCGGTATCGGTCTCGTGGGCCGAGTATGGTGAAGGAAGATATTGATGAGGAAATGAAGGCGAGAAATCATGCTATGAAACACCTTAAGAAAATTGTTCCTTCAACTGTAAACTTTGTATGCCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

516

Amino Acids

59.21

Weight (kDa)

8.91

Isoelectric Point (pI)

47.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 54 - 90 8.1e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 146 - 513 2.7e-31 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 153 - 264 5.5e-08 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 900
AccB7I CCANNNNNTGG 2 cut(s) 788, 792
AccI GTMKAC 3 cut(s) 581, 616, 1062
AccII CGCG 3 cut(s) 247, 378, 380
AciI CCGC 4 cut(s) 247, 253, 380, 1058
AclWI GGATC 5 cut(s) 135, 264, 381, 447, 1412
AcsI RAATTY 2 cut(s) 301, 657
AcuI CTGAAG 1 cut(s) 1049
AfaI GTAC 2 cut(s) 704, 909
AfiI CCNNNNNNNGG 2 cut(s) 788, 792
AflII CTTAAG 1 cut(s) 1508
AflIII ACRYGT 2 cut(s) 673, 1366
AgsI TTSAA 9 cut(s) 214, 243, 290, 410, 497, 572, 646, 1201, 1527
AhlI ACTAGT 1 cut(s) 230
AluBI AGCT 9 cut(s) 120, 147, 227, 508, 524, 940, 991, 1027, 1315
AluI AGCT 9 cut(s) 120, 147, 227, 508, 524, 940, 991, 1027, 1315
Alw21I GWGCWC 3 cut(s) 942, 1317, 1348
Alw26I GTCTC 3 cut(s) 1183, 1280, 1440
AlwI GGATC 5 cut(s) 135, 264, 381, 447, 1412
Ama87I CYCGRG 1 cut(s) 941
AoxI GGCC 1 cut(s) 1442
ApeKI GCWGC 5 cut(s) 221, 224, 521, 746, 1358
ApoI RAATTY 2 cut(s) 301, 657
AseI ATTAAT 2 cut(s) 710, 1115
AspLEI GCGC 3 cut(s) 351, 380, 1279
AspS9I GGNCC 2 cut(s) 398, 1442
AsuHPI GGTGA 3 cut(s) 122, 991, 1465
AvaI CYCGRG 1 cut(s) 941
AvaII GGWCC 1 cut(s) 398
BanII GRGCYC 2 cut(s) 942, 1317
BauI CACGAG 1 cut(s) 1437
Bbv12I GWGCWC 3 cut(s) 942, 1317, 1348
BbvI GCAGC 5 cut(s) 233, 236, 533, 758, 1345
BccI CCATC 8 cut(s) 170, 455, 459, 680, 786, 790, 1036, 1228
BceAI ACGGC 1 cut(s) 336
BciVI GTATCC 1 cut(s) 937
BcoDI GTCTC 3 cut(s) 1183, 1280, 1440
BcuI ACTAGT 1 cut(s) 230
BfaI CTAG 4 cut(s) 231, 434, 563, 603
BfmI CTRYAG 1 cut(s) 1547
BfoI RGCGCY 1 cut(s) 352
BfrI CTTAAG 1 cut(s) 1508
BfuAI ACCTGC 1 cut(s) 900
BfuI GTATCC 1 cut(s) 937
BglII AGATCT 1 cut(s) 840
BisI GCNGC 5 cut(s) 222, 225, 522, 747, 1359
BlsI GCNGC 5 cut(s) 223, 226, 523, 748, 1360
BmcAI AGTACT 1 cut(s) 704
Bme18I GGWCC 1 cut(s) 398
BmeT110I CYCGRG 1 cut(s) 941
BmgT120I GGNCC 2 cut(s) 398, 1442
BmiI GGNNCC 1 cut(s) 399
BmsI GCATC 4 cut(s) 5, 275, 615, 1181
BplI GAGNNNNNCTC 2 cut(s) 104, 136
BpmI CTGGAG 2 cut(s) 530, 1421
BpuEI CTTGAG 3 cut(s) 524, 719, 1085
BsaBI GATNNNNATC 2 cut(s) 1046, 1208
BsaI GGTCTC 1 cut(s) 1440
BsaWI WCCGGW 1 cut(s) 1425
Bsc4I CCNNNNNNNGG 2 cut(s) 788, 792
Bse1I ACTGG 2 cut(s) 722, 1404
Bse3DI GCAATG 1 cut(s) 486
Bse8I GATNNNNATC 2 cut(s) 1046, 1208
BseGI GGATG 7 cut(s) 20, 181, 470, 606, 691, 782, 797
BseJI GATNNNNATC 2 cut(s) 1046, 1208
BseLI CCNNNNNNNGG 2 cut(s) 788, 792
BseMI GCAATG 1 cut(s) 486
BseMII CTCAG 5 cut(s) 890, 912, 927, 1037, 1330
BseNI ACTGG 2 cut(s) 722, 1404
BseRI GAGGAG 2 cut(s) 1244, 1274
BseXI GCAGC 5 cut(s) 233, 236, 533, 758, 1345
Bsh1236I CGCG 3 cut(s) 247, 378, 380
BshFI GGCC 1 cut(s) 1444
BsiHKAI GWGCWC 3 cut(s) 942, 1317, 1348
BsiHKCI CYCGRG 1 cut(s) 941
BsiSI CCGG 2 cut(s) 173, 1426
BslI CCNNNNNNNGG 2 cut(s) 788, 792
BsmAI GTCTC 3 cut(s) 1183, 1280, 1440
BsmI GAATGC 3 cut(s) 180, 635, 1393
BsnI GGCC 1 cut(s) 1444
Bso31I GGTCTC 1 cut(s) 1440
BsoBI CYCGRG 1 cut(s) 941
Bsp1286I GDGCHC 3 cut(s) 942, 1317, 1348
Bsp143I GATC 7 cut(s) 127, 256, 373, 436, 452, 840, 1417
BspACI CCGC 4 cut(s) 247, 253, 380, 1058
BspANI GGCC 1 cut(s) 1444
BspCNI CTCAG 5 cut(s) 891, 913, 928, 1036, 1329
BspFNI CGCG 3 cut(s) 247, 378, 380
BspHI TCATGA 2 cut(s) 1164, 1309
BspLI GGNNCC 1 cut(s) 399
BspMI ACCTGC 1 cut(s) 900
BspPI GGATC 5 cut(s) 135, 264, 381, 447, 1412
BspTI CTTAAG 1 cut(s) 1508
BspTNI GGTCTC 1 cut(s) 1440
BsrDI GCAATG 1 cut(s) 486
BsrI ACTGG 2 cut(s) 722, 1404
BssMI GATC 7 cut(s) 127, 256, 373, 436, 452, 840, 1417
BssSI CACGAG 1 cut(s) 1437
Bst2BI CACGAG 1 cut(s) 1437
Bst4CI ACNGT 3 cut(s) 414, 719, 1531
Bst6I CTCTTC 1 cut(s) 1149
BstAFI CTTAAG 1 cut(s) 1508
BstC8I GCNNGC 2 cut(s) 206, 424
BstDEI CTNAG 5 cut(s) 899, 921, 936, 1023, 1316
BstF5I GGATG 7 cut(s) 20, 181, 470, 606, 691, 782, 797
BstFNI CGCG 3 cut(s) 247, 378, 380
BstH2I RGCGCY 1 cut(s) 352
BstHHI GCGC 3 cut(s) 351, 380, 1279
BstKTI GATC 7 cut(s) 130, 259, 376, 439, 455, 843, 1420
BstMAI GTCTC 3 cut(s) 1183, 1280, 1440
BstMBI GATC 7 cut(s) 127, 256, 373, 436, 452, 840, 1417
BstNSI RCATGY 2 cut(s) 677, 1370
BstSFI CTRYAG 1 cut(s) 1547
BstUI CGCG 3 cut(s) 247, 378, 380
BstV1I GCAGC 5 cut(s) 233, 236, 533, 758, 1345
BstX2I RGATCY 2 cut(s) 256, 840
BstXI CCANNNNNNTGG 1 cut(s) 757
BstYI RGATCY 2 cut(s) 256, 840
BsuI GTATCC 1 cut(s) 937
BsuRI GGCC 1 cut(s) 1444
BtsCI GGATG 7 cut(s) 20, 181, 470, 606, 691, 782, 797
BtsIMutI CAGTG 4 cut(s) 169, 744, 1057, 1397
BveI ACCTGC 1 cut(s) 900
Cac8I GCNNGC 2 cut(s) 206, 424
CciI TCATGA 2 cut(s) 1164, 1309
CfoI GCGC 3 cut(s) 351, 380, 1279
Cfr13I GGNCC 2 cut(s) 398, 1442
CseI GACGC 1 cut(s) 1125
Csp6I GTAC 2 cut(s) 703, 908
CviQI GTAC 2 cut(s) 703, 908
DdeI CTNAG 5 cut(s) 899, 921, 936, 1023, 1316
DpnI GATC 7 cut(s) 129, 258, 375, 438, 454, 842, 1419
DpnII GATC 7 cut(s) 127, 256, 373, 436, 452, 840, 1417
Eam1104I CTCTTC 1 cut(s) 1149
EarI CTCTTC 1 cut(s) 1149
Ecl136II GAGCTC 2 cut(s) 940, 1315
Eco24I GRGCYC 2 cut(s) 942, 1317
Eco31I GGTCTC 1 cut(s) 1440
Eco32I GATATC 1 cut(s) 1048
Eco47I GGWCC 1 cut(s) 398
Eco53kI GAGCTC 2 cut(s) 940, 1315
Eco57I CTGAAG 1 cut(s) 1049
Eco88I CYCGRG 1 cut(s) 941
EcoICRI GAGCTC 2 cut(s) 940, 1315
EcoRV GATATC 1 cut(s) 1048
EcoT38I GRGCYC 2 cut(s) 942, 1317
FauI CCCGC 1 cut(s) 246
FauNDI CATATG 1 cut(s) 393
FblI GTMKAC 3 cut(s) 581, 616, 1062
Fnu4HI GCNGC 5 cut(s) 222, 225, 522, 747, 1359
FokI GGATG 7 cut(s) 27, 188, 477, 593, 698, 769, 804
FriOI GRGCYC 2 cut(s) 942, 1317
Fsp4HI GCNGC 5 cut(s) 222, 225, 522, 747, 1359
FspBI CTAG 4 cut(s) 231, 434, 563, 603
GlaI GCGC 3 cut(s) 350, 379, 1278
GluI GCNGC 5 cut(s) 222, 225, 522, 747, 1359
GsuI CTGGAG 2 cut(s) 530, 1421
HaeII RGCGCY 1 cut(s) 352
HaeIII GGCC 1 cut(s) 1444
HapII CCGG 2 cut(s) 173, 1426
HgaI GACGC 1 cut(s) 1125
HhaI GCGC 3 cut(s) 351, 380, 1279
Hin6I GCGC 3 cut(s) 349, 378, 1277
HinP1I GCGC 3 cut(s) 349, 378, 1277
HincII GTYRAC 1 cut(s) 617
HindII GTYRAC 1 cut(s) 617
HinfI GANTC 4 cut(s) 159, 277, 968, 1288
HpaII CCGG 2 cut(s) 173, 1426
HphI GGTGA 3 cut(s) 122, 991, 1465
Hpy166II GTNNAC 5 cut(s) 582, 617, 1063, 1124, 1534
Hpy188I TCNGA 4 cut(s) 628, 900, 922, 1319
Hpy188III TCNNGA 9 cut(s) 434, 569, 698, 821, 943, 1039, 1070, 1165, 1310
Hpy8I GTNNAC 5 cut(s) 582, 617, 1063, 1124, 1534
Hpy99I CGWCG 1 cut(s) 444
HpyAV CCTTC 5 cut(s) 1006, 1162, 1450, 1474, 1533
HpyCH4III ACNGT 3 cut(s) 414, 719, 1531
HpyCH4V TGCA 7 cut(s) 385, 449, 479, 633, 851, 1186, 1397
HpyF3I CTNAG 5 cut(s) 899, 921, 936, 1023, 1316
HspAI GCGC 3 cut(s) 349, 378, 1277
Kzo9I GATC 7 cut(s) 127, 256, 373, 436, 452, 840, 1417
Lsp1109I GCAGC 5 cut(s) 233, 236, 533, 758, 1345
LweI GCATC 4 cut(s) 5, 275, 615, 1181
MaeI CTAG 4 cut(s) 231, 434, 563, 603
MaeIII GTNAC 3 cut(s) 164, 648, 1267
MalI GATC 7 cut(s) 129, 258, 375, 438, 454, 842, 1419
MboI GATC 7 cut(s) 127, 256, 373, 436, 452, 840, 1417
MboII GAAGA 5 cut(s) 16, 302, 1136, 1213, 1472
MflI RGATCY 2 cut(s) 256, 840
MhlI GDGCHC 3 cut(s) 942, 1317, 1348
MluCI AATT 7 cut(s) 29, 301, 657, 664, 814, 1112, 1515
MlyI GAGTC 1 cut(s) 1282
MmeI TCCRAC 1 cut(s) 1206
MseI TTAA 8 cut(s) 531, 663, 678, 710, 767, 1115, 1382, 1509
MslI CAYNNNNRTG 2 cut(s) 320, 678
MspA1I CMGCKG 1 cut(s) 1027
MspCI CTTAAG 1 cut(s) 1508
MspI CCGG 2 cut(s) 173, 1426
Mva1269I GAATGC 3 cut(s) 180, 635, 1393
MvnI CGCG 3 cut(s) 247, 378, 380
NdeI CATATG 1 cut(s) 393
NdeII GATC 7 cut(s) 127, 256, 373, 436, 452, 840, 1417
NlaIV GGNNCC 1 cut(s) 399
NmeAIII GCCGAG 1 cut(s) 1470
NmuCI GTSAC 3 cut(s) 164, 648, 1267
NspI RCATGY 2 cut(s) 677, 1370
PaeR7I CTCGAG 1 cut(s) 941
PagI TCATGA 2 cut(s) 1164, 1309
PciI ACATGT 2 cut(s) 673, 1366
PcsI WCGNNNNNNNCGW 1 cut(s) 448
PctI GAATGC 3 cut(s) 180, 635, 1393
PfeI GAWTC 3 cut(s) 159, 277, 968
PflMI CCANNNNNTGG 2 cut(s) 788, 792
PkrI GCNGC 5 cut(s) 223, 226, 523, 748, 1360
PleI GAGTC 1 cut(s) 1282
PpsI GAGTC 1 cut(s) 1282
PscI ACATGT 2 cut(s) 673, 1366
PshBI ATTAAT 2 cut(s) 710, 1115
Psp124BI GAGCTC 2 cut(s) 942, 1317
PspN4I GGNNCC 1 cut(s) 399
PspPI GGNCC 2 cut(s) 398, 1442
PsuI RGATCY 2 cut(s) 256, 840
PvuII CAGCTG 1 cut(s) 1027
RsaI GTAC 2 cut(s) 704, 909
RsaNI GTAC 2 cut(s) 703, 908
RseI CAYNNNNRTG 2 cut(s) 320, 678
SacI GAGCTC 2 cut(s) 942, 1317
SalI GTCGAC 1 cut(s) 615
SaqAI TTAA 8 cut(s) 531, 663, 678, 710, 767, 1115, 1382, 1509
SatI GCNGC 5 cut(s) 222, 225, 522, 747, 1359
Sau3AI GATC 7 cut(s) 127, 256, 373, 436, 452, 840, 1417
Sau96I GGNCC 2 cut(s) 398, 1442
ScaI AGTACT 1 cut(s) 704
SchI GAGTC 1 cut(s) 1282
SduI GDGCHC 3 cut(s) 942, 1317, 1348
SfaNI GCATC 4 cut(s) 5, 275, 615, 1181
SfcI CTRYAG 1 cut(s) 1547
Sfr274I CTCGAG 1 cut(s) 941
SinI GGWCC 1 cut(s) 398
SlaI CTCGAG 1 cut(s) 941
SmiMI CAYNNNNRTG 2 cut(s) 320, 678
SmlI CTYRAG 5 cut(s) 503, 698, 941, 1100, 1508
SmoI CTYRAG 5 cut(s) 503, 698, 941, 1100, 1508
SpeI ACTAGT 1 cut(s) 230
Sse9I AATT 7 cut(s) 29, 301, 657, 664, 814, 1112, 1515
SsiI CCGC 4 cut(s) 247, 253, 380, 1058
SspMI CTAG 4 cut(s) 231, 434, 563, 603
SstI GAGCTC 2 cut(s) 942, 1317
TaaI ACNGT 3 cut(s) 414, 719, 1531
TaqI TCGA 7 cut(s) 130, 305, 586, 616, 726, 942, 966
TaqII GACCGA 1 cut(s) 1422
TasI AATT 7 cut(s) 29, 301, 657, 664, 814, 1112, 1515
TatI WGTACW 1 cut(s) 702
TfiI GAWTC 3 cut(s) 159, 277, 968
Tru1I TTAA 8 cut(s) 531, 663, 678, 710, 767, 1115, 1382, 1509
Tru9I TTAA 8 cut(s) 531, 663, 678, 710, 767, 1115, 1382, 1509
TscAI CASTG 4 cut(s) 169, 744, 1057, 1404
TseFI GTSAC 3 cut(s) 164, 648, 1267
TseI GCWGC 5 cut(s) 221, 224, 521, 746, 1358
Tsp45I GTSAC 3 cut(s) 164, 648, 1267
TspGWI ACGGA 1 cut(s) 973
TspRI CASTG 4 cut(s) 169, 744, 1057, 1404
Van91I CCANNNNNTGG 2 cut(s) 788, 792
Vha464I CTTAAG 1 cut(s) 1508
VpaK11BI GGWCC 1 cut(s) 398
VspI ATTAAT 2 cut(s) 710, 1115
XapI RAATTY 2 cut(s) 301, 657
XbaI TCTAGA 1 cut(s) 433
XceI RCATGY 2 cut(s) 677, 1370
XcmI CCANNNNNNNNNTGG 1 cut(s) 789
XhoI CTCGAG 1 cut(s) 941
XmiI GTMKAC 3 cut(s) 581, 616, 1062
XspI CTAG 4 cut(s) 231, 434, 563, 603
ZrmI AGTACT 1 cut(s) 704
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.