Prupe.7G069300_v2.0.a1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000095
Physical Location & Seq
Forward (+)
10740948 .. 10745324
4377 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G069300.1

Sequence Viewer

Length: 1437 bp
ATGCAGGGTGATTACATCTTGAGAAAGAGTAACAAAAGTAAGTATGATTACCACCTGGCAGACCGAATCAGTGAGTTGGCAGATGAAATTCTTGTTAGTATACTGACTCTCCTGCCGCTAAATGAAGCAGCAACTACTAGTATCCTTTCTAAGCGATGGCGGTATCTGTGTCAGTATGTATTGGCATCTACTATGACTCTCAAATTTGATGCTGAGAAAACTTCATGCAGTTTGATTGACCTCAATCGAGAAGAACGAGAACAGAAAATCCGTAGGTATGTTGCTTGGGTGAATAGTGTGGTGGAGCAGCATACATGGCCAAATATTGAACAATTCAGGATTGCTTTTGATTTGGATAATAGCTTTTCAAGTTCCATTAATAAATGGATTCAATTTGCACTGAAAAAAAGAGTTCAAATTCTTGAGTTGGACTTCTCAGAAAATGGCATTCATCATAGACAGAAATCCTGCTATAATTTTCCCCATGAACTTTTAGGTCTCAACAGAGGGTCTACTTCTACAGCTGTGTGTTGTGAAATTCCAAGTCTAAACCCTTGTGTATACCTTGGCTTAAAGTCAATCAGAGTTCTTCATTTCAATTTTGTTGATGTGGCTGAAGAAGTTCTTGAGTGCTTCTTGTCTAATTGCCCAGTTCTTGAACGGTTATCAGTGTTTCACTCCCCAAATTTGGTAAATTTAAGGGTTGTTGGTCCATCGATTGCATTGAAGTACCTAGTAATTCGACAATGTAACAGCCTTGAAAGCATTGAGATTTGTGATGCAAACCTGGTTTCACTCAGTTATGTTGGAAATGAGATAAGCTTGCTTCTTAGGAATGTGCCGCTGCTTGTTGAGGTATCCATTTCTGAGGACTGTATCTGCAATAATTTCATAGAGGTTGCCTTCACTCAACTTTCGTGCTGTCTTTCTCAGCTAGAGATTCTCAAACTGACTGATCAAATAGTGCCCTACAAGAGGGATCATATATTTCCTATATTAGCAAATCTAAAGCATTTGGAAATGATATTTGAAGAAGACAATGTTTGTGGCCTTCTTCAGTTAACTTCCTTCTTTAGGGCATCTCCGTGCCTGCACAGACTTGTGTTGTACTTGCAGAAAATCAGTCTCAATGAGGTAGATATTTGTGTCAGGAATGAATATTCAGAGATGGACTACACAAAATCCATGAGAAGGAAAATAAAATATAAGAAGGCCAAATGCTCCCATAATTACCTGAAGATAGTGGAATTGGTAGGGTATGATGGTCACACAAGTGATTTTGAACTTGTCAAGTACTTGGCAAAGACTGCTGTGAAACTGGAGAAAATTGTGATAAAAGGAGAAGAGGAGGGCCCATGGAGAAAAATGGCAAGAGATGTTGCTATGCACCGGCTTAAAGAAAAGGTTCCTTCAACTATAGAATTTGTATACCGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

479

Amino Acids

55.27

Weight (kDa)

7.48

Isoelectric Point (pI)

42.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 4 cut(s) 100, 512, 561, 1428
AciI CCGC 3 cut(s) 116, 160, 842
AclWI GGATC 1 cut(s) 987
AcoI YGGCCR 1 cut(s) 317
AcsI RAATTY 7 cut(s) 87, 203, 417, 537, 685, 694, 1421
AcuI CTGAAG 3 cut(s) 636, 1040, 1256
AfaI GTAC 3 cut(s) 731, 1109, 1295
AfiI CCNNNNNNNGG 4 cut(s) 688, 975, 1074, 1191
AgeI ACCGGT 1 cut(s) 1431
AhlI ACTAGT 1 cut(s) 137
AjnI CCWGG 2 cut(s) 54, 786
AleI CACNNNNGTG 1 cut(s) 1272
AloI GAACNNNNNNTCC 2 cut(s) 252, 284
AluBI AGCT 4 cut(s) 363, 524, 822, 934
AluI AGCT 4 cut(s) 363, 524, 822, 934
Alw26I GTCTC 2 cut(s) 503, 1130
AlwI GGATC 1 cut(s) 987
AoxI GGCC 4 cut(s) 317, 1048, 1212, 1351
ApaI GGGCCC 1 cut(s) 1355
ApeKI GCWGC 3 cut(s) 128, 307, 844
ApoI RAATTY 7 cut(s) 87, 203, 417, 537, 685, 694, 1421
AseI ATTAAT 1 cut(s) 378
AsiGI ACCGGT 1 cut(s) 1431
Asp700I GAANNNNTTC 2 cut(s) 621, 1404
AspS9I GGNCC 3 cut(s) 710, 1351, 1352
AsuHPI GGTGA 2 cut(s) 20, 301
AvaII GGWCC 1 cut(s) 710
BaeGI GKGCMC 2 cut(s) 969, 1355
BalI TGGCCA 1 cut(s) 319
BanII GRGCYC 1 cut(s) 1355
BbsI GAAGAC 1 cut(s) 1041
BbvI GCAGC 3 cut(s) 140, 319, 831
BccI CCATC 4 cut(s) 150, 721, 1162, 1256
BciT130I CCWGG 2 cut(s) 56, 788
BciVI GTATCC 2 cut(s) 152, 868
BclI TGATCA 1 cut(s) 955
BcoDI GTCTC 2 cut(s) 503, 1130
BcuI ACTAGT 1 cut(s) 137
BfaI CTAG 3 cut(s) 138, 734, 935
BfmI CTRYAG 2 cut(s) 519, 1416
BfuI GTATCC 2 cut(s) 152, 868
BisI GCNGC 5 cut(s) 116, 129, 308, 842, 845
BlsI GCNGC 5 cut(s) 117, 130, 309, 843, 846
BmcAI AGTACT 1 cut(s) 1295
Bme1390I CCNGG 2 cut(s) 56, 788
Bme18I GGWCC 1 cut(s) 710
BmgT120I GGNCC 3 cut(s) 710, 1351, 1352
BmiI GGNNCC 2 cut(s) 1353, 1407
BmrFI CCNGG 2 cut(s) 56, 788
BmrI ACTGGG 1 cut(s) 644
BmsI GCATC 4 cut(s) 194, 199, 769, 1088
BmuI ACTGGG 1 cut(s) 644
BpiI GAAGAC 1 cut(s) 1041
BpmI CTGGAG 1 cut(s) 1340
BpuEI CTTGAG 3 cut(s) 40, 443, 647
Bsa29I ATCGAT 1 cut(s) 716
BsaI GGTCTC 1 cut(s) 503
BsaJI CCNNGG 2 cut(s) 565, 1355
BsaWI WCCGGW 1 cut(s) 1431
BsaXI ACNNNNNCTCC 2 cut(s) 93, 123
Bsc4I CCNNNNNNNGG 4 cut(s) 688, 975, 1074, 1191
Bse118I RCCGGY 2 cut(s) 1389, 1431
Bse1I ACTGG 2 cut(s) 650, 1323
BseBI CCWGG 2 cut(s) 56, 788
BseCI ATCGAT 1 cut(s) 716
BseDI CCNNGG 2 cut(s) 565, 1355
BseLI CCNNNNNNNGG 4 cut(s) 688, 975, 1074, 1191
BseMII CTCAG 5 cut(s) 204, 450, 811, 858, 944
BseNI ACTGG 2 cut(s) 650, 1323
BseRI GAGGAG 1 cut(s) 1361
BseSI GKGCMC 2 cut(s) 969, 1355
BseXI GCAGC 3 cut(s) 140, 319, 831
BsgI GTGCAG 1 cut(s) 1076
BshFI GGCC 4 cut(s) 319, 1050, 1214, 1353
BshTI ACCGGT 1 cut(s) 1431
BshVI ATCGAT 1 cut(s) 716
BsiSI CCGG 2 cut(s) 1390, 1432
BslI CCNNNNNNNGG 4 cut(s) 688, 975, 1074, 1191
BsmAI GTCTC 2 cut(s) 503, 1130
BsmI GAATGC 1 cut(s) 447
BsnI GGCC 4 cut(s) 319, 1050, 1214, 1353
Bso31I GGTCTC 1 cut(s) 503
Bsp120I GGGCCC 1 cut(s) 1351
Bsp1286I GDGCHC 2 cut(s) 969, 1355
Bsp143I GATC 2 cut(s) 955, 979
Bsp19I CCATGG 1 cut(s) 1355
BspACI CCGC 3 cut(s) 116, 160, 842
BspANI GGCC 4 cut(s) 319, 1050, 1214, 1353
BspCNI CTCAG 5 cut(s) 205, 449, 810, 859, 943
BspDI ATCGAT 1 cut(s) 716
BspLI GGNNCC 2 cut(s) 1353, 1407
BspPI GGATC 1 cut(s) 987
BspTNI GGTCTC 1 cut(s) 503
BsrFI RCCGGY 2 cut(s) 1389, 1431
BsrI ACTGG 2 cut(s) 650, 1323
BssAI RCCGGY 2 cut(s) 1389, 1431
BssECI CCNNGG 2 cut(s) 565, 1355
BssMI GATC 2 cut(s) 955, 979
BssNAI GTATAC 3 cut(s) 101, 562, 1429
BssT1I CCWWGG 2 cut(s) 565, 1355
Bst1107I GTATAC 3 cut(s) 101, 562, 1429
Bst2UI CCWGG 2 cut(s) 56, 788
Bst4CI ACNGT 2 cut(s) 663, 875
Bst6I CTCTTC 1 cut(s) 1338
BstAPI GCANNNNNTGC 1 cut(s) 1307
BstC8I GCNNGC 2 cut(s) 824, 1091
BstDEI CTNAG 7 cut(s) 150, 213, 436, 797, 830, 867, 930
BstDSI CCRYGG 1 cut(s) 1355
BstENI CCTNNNNNAGG 2 cut(s) 973, 1072
BstKTI GATC 2 cut(s) 958, 982
BstMAI GTCTC 2 cut(s) 503, 1130
BstMBI GATC 2 cut(s) 955, 979
BstMWI GCNNNNNNNGC 3 cut(s) 316, 762, 1307
BstNI CCWGG 2 cut(s) 56, 788
BstSCI CCNGG 2 cut(s) 54, 786
BstSFI CTRYAG 2 cut(s) 519, 1416
BstSLI GKGCMC 2 cut(s) 969, 1355
BstV1I GCAGC 3 cut(s) 140, 319, 831
BstV2I GAAGAC 1 cut(s) 1041
BstZ17I GTATAC 3 cut(s) 101, 562, 1429
Bsu15I ATCGAT 1 cut(s) 716
BsuI GTATCC 2 cut(s) 152, 868
BsuRI GGCC 4 cut(s) 319, 1050, 1214, 1353
BsuTUI ATCGAT 1 cut(s) 716
BtgI CCRYGG 1 cut(s) 1355
BtgZI GCGATG 1 cut(s) 169
BtsIMutI CAGTG 3 cut(s) 76, 398, 675
Cac8I GCNNGC 2 cut(s) 824, 1091
Cfr10I RCCGGY 2 cut(s) 1389, 1431
Cfr13I GGNCC 3 cut(s) 710, 1351, 1352
ClaI ATCGAT 1 cut(s) 716
CsiI ACCWGGT 1 cut(s) 786
Csp6I GTAC 3 cut(s) 730, 1108, 1294
CspAI ACCGGT 1 cut(s) 1431
CspCI CAANNNNNGTGG 2 cut(s) 1027, 1062
CviAII CATG 5 cut(s) 225, 315, 485, 1186, 1356
CviQI GTAC 3 cut(s) 730, 1108, 1294
DdeI CTNAG 7 cut(s) 150, 213, 436, 797, 830, 867, 930
DpnI GATC 2 cut(s) 957, 981
DpnII GATC 2 cut(s) 955, 979
EaeI YGGCCR 1 cut(s) 317
Eam1104I CTCTTC 1 cut(s) 1338
EarI CTCTTC 1 cut(s) 1338
Eco130I CCWWGG 2 cut(s) 565, 1355
Eco24I GRGCYC 1 cut(s) 1355
Eco31I GGTCTC 1 cut(s) 503
Eco47I GGWCC 1 cut(s) 710
Eco57I CTGAAG 3 cut(s) 636, 1040, 1256
EcoNI CCTNNNNNAGG 2 cut(s) 973, 1072
EcoO109I RGGNCCY 1 cut(s) 1351
EcoRII CCWGG 2 cut(s) 54, 786
EcoT14I CCWWGG 2 cut(s) 565, 1355
EcoT38I GRGCYC 1 cut(s) 1355
ErhI CCWWGG 2 cut(s) 565, 1355
FaeI CATG 5 cut(s) 228, 318, 488, 1189, 1359
FalI AAGNNNNNCTT 2 cut(s) 609, 641
FatI CATG 5 cut(s) 224, 314, 484, 1185, 1355
FbaI TGATCA 1 cut(s) 955
FblI GTMKAC 4 cut(s) 100, 512, 561, 1428
Fnu4HI GCNGC 5 cut(s) 116, 129, 308, 842, 845
FriOI GRGCYC 1 cut(s) 1355
Fsp4HI GCNGC 5 cut(s) 116, 129, 308, 842, 845
FspBI CTAG 3 cut(s) 138, 734, 935
GluI GCNGC 5 cut(s) 116, 129, 308, 842, 845
GsuI CTGGAG 1 cut(s) 1340
HaeIII GGCC 4 cut(s) 319, 1050, 1214, 1353
HapII CCGG 2 cut(s) 1390, 1432
Hin1II CATG 5 cut(s) 228, 318, 488, 1189, 1359
HincII GTYRAC 1 cut(s) 1062
HindII GTYRAC 1 cut(s) 1062
HindIII AAGCTT 1 cut(s) 820
HinfI GANTC 5 cut(s) 66, 106, 196, 388, 940
HpaI GTTAAC 1 cut(s) 1062
HpaII CCGG 2 cut(s) 1390, 1432
HphI GGTGA 2 cut(s) 20, 301
Hpy166II GTNNAC 5 cut(s) 101, 513, 562, 1062, 1429
Hpy188I TCNGA 4 cut(s) 439, 584, 868, 1165
Hpy188III TCNNGA 7 cut(s) 19, 248, 337, 422, 626, 656, 1150
Hpy8I GTNNAC 5 cut(s) 101, 513, 562, 1062, 1429
HpyAV CCTTC 6 cut(s) 913, 1061, 1078, 1185, 1204, 1419
HpyCH4III ACNGT 2 cut(s) 663, 875
HpyCH4V TGCA 9 cut(s) 4, 228, 398, 722, 782, 882, 1093, 1114, 1387
HpyF10VI GCNNNNNNNGC 3 cut(s) 316, 762, 1307
HpyF3I CTNAG 7 cut(s) 150, 213, 436, 797, 830, 867, 930
Hsp92II CATG 5 cut(s) 228, 318, 488, 1189, 1359
Ksp22I TGATCA 1 cut(s) 955
KspAI GTTAAC 1 cut(s) 1062
Kzo9I GATC 2 cut(s) 955, 979
LmnI GCTCC 2 cut(s) 304, 1226
Lsp1109I GCAGC 3 cut(s) 140, 319, 831
LweI GCATC 4 cut(s) 194, 199, 769, 1088
MabI ACCWGGT 1 cut(s) 786
MaeI CTAG 3 cut(s) 138, 734, 935
MaeIII GTNAC 3 cut(s) 29, 749, 1265
MalI GATC 2 cut(s) 957, 981
MboI GATC 2 cut(s) 955, 979
MboII GAAGA 8 cut(s) 263, 581, 629, 1043, 1046, 1046, 1249, 1355
MhlI GDGCHC 2 cut(s) 969, 1355
MlsI TGGCCA 1 cut(s) 319
MluNI TGGCCA 1 cut(s) 319
MlyI GAGTC 2 cut(s) 100, 190
MmeI TCCRAC 2 cut(s) 408, 787
MnlI CCTC 9 cut(s) 251, 500, 847, 862, 889, 969, 1126, 1339, 1342
Mox20I TGGCCA 1 cut(s) 319
MroXI GAANNNNTTC 2 cut(s) 621, 1404
MscI TGGCCA 1 cut(s) 319
MseI TTAA 5 cut(s) 378, 572, 698, 1061, 1395
MslI CAYNNNNRTG 2 cut(s) 1084, 1272
Msp20I TGGCCA 1 cut(s) 319
MspA1I CMGCKG 2 cut(s) 524, 844
MspI CCGG 2 cut(s) 1390, 1432
MspR9I CCNGG 2 cut(s) 56, 788
Mva1269I GAATGC 1 cut(s) 447
MvaI CCWGG 2 cut(s) 56, 788
MwoI GCNNNNNNNGC 3 cut(s) 316, 762, 1307
NcoI CCATGG 1 cut(s) 1355
NdeII GATC 2 cut(s) 955, 979
NlaIII CATG 5 cut(s) 228, 318, 488, 1189, 1359
NlaIV GGNNCC 2 cut(s) 1353, 1407
NmuCI GTSAC 1 cut(s) 1265
OliI CACNNNNGTG 1 cut(s) 1272
PcsI WCGNNNNNNNCGW 1 cut(s) 253
PctI GAATGC 1 cut(s) 447
PdmI GAANNNNTTC 2 cut(s) 621, 1404
PfeI GAWTC 3 cut(s) 66, 388, 940
PinAI ACCGGT 1 cut(s) 1431
PkrI GCNGC 5 cut(s) 117, 130, 309, 843, 846
PleI GAGTC 2 cut(s) 100, 190
PpsI GAGTC 2 cut(s) 100, 190
PshBI ATTAAT 1 cut(s) 378
Psp6I CCWGG 2 cut(s) 54, 786
PspGI CCWGG 2 cut(s) 54, 786
PspN4I GGNNCC 2 cut(s) 1353, 1407
PspOMI GGGCCC 1 cut(s) 1351
PspPI GGNCC 3 cut(s) 710, 1351, 1352
PvuII CAGCTG 1 cut(s) 524
RsaI GTAC 3 cut(s) 731, 1109, 1295
RsaNI GTAC 3 cut(s) 730, 1108, 1294
RseI CAYNNNNRTG 2 cut(s) 1084, 1272
SaqAI TTAA 5 cut(s) 378, 572, 698, 1061, 1395
SatI GCNGC 5 cut(s) 116, 129, 308, 842, 845
Sau3AI GATC 2 cut(s) 955, 979
Sau96I GGNCC 3 cut(s) 710, 1351, 1352
ScaI AGTACT 1 cut(s) 1295
SchI GAGTC 2 cut(s) 100, 190
ScrFI CCNGG 2 cut(s) 56, 788
SduI GDGCHC 2 cut(s) 969, 1355
SexAI ACCWGGT 1 cut(s) 786
SfaNI GCATC 4 cut(s) 194, 199, 769, 1088
SfcI CTRYAG 2 cut(s) 519, 1416
SinI GGWCC 1 cut(s) 710
SmiMI CAYNNNNRTG 2 cut(s) 1084, 1272
SmlI CTYRAG 3 cut(s) 19, 422, 626
SmoI CTYRAG 3 cut(s) 19, 422, 626
SpeI ACTAGT 1 cut(s) 137
SsiI CCGC 3 cut(s) 116, 160, 842
SspI AATATT 2 cut(s) 325, 1160
SspMI CTAG 3 cut(s) 138, 734, 935
StyD4I CCNGG 2 cut(s) 54, 786
StyI CCWWGG 2 cut(s) 565, 1355
TaaI ACNGT 2 cut(s) 663, 875
TaqI TCGA 3 cut(s) 247, 716, 742
TaqII GACCGA 1 cut(s) 78
TatI WGTACW 2 cut(s) 1107, 1293
TauI GCSGC 2 cut(s) 118, 844
TfiI GAWTC 3 cut(s) 66, 388, 940
Tru1I TTAA 5 cut(s) 378, 572, 698, 1061, 1395
Tru9I TTAA 5 cut(s) 378, 572, 698, 1061, 1395
TscAI CASTG 3 cut(s) 76, 405, 675
TseFI GTSAC 1 cut(s) 1265
TseI GCWGC 3 cut(s) 128, 307, 844
Tsp45I GTSAC 1 cut(s) 1265
TspDTI ATGAA 8 cut(s) 99, 138, 213, 440, 501, 581, 880, 1170
TspGWI ACGGA 2 cut(s) 260, 1074
TspRI CASTG 3 cut(s) 76, 405, 675
VpaK11BI GGWCC 1 cut(s) 710
VspI ATTAAT 1 cut(s) 378
XagI CCTNNNNNAGG 2 cut(s) 973, 1072
XapI RAATTY 7 cut(s) 87, 203, 417, 537, 685, 694, 1421
XmiI GTMKAC 4 cut(s) 100, 512, 561, 1428
XmnI GAANNNNTTC 2 cut(s) 621, 1404
XspI CTAG 3 cut(s) 138, 734, 935
ZrmI AGTACT 1 cut(s) 1295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.