Rw2G013940

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000095
Physical Location & Seq
Forward (+)
15157274 .. 15160649
3376 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G013940.1

Sequence Viewer

Length: 1386 bp
ATGCCAGAGTCTCATCGGAAGTTGGCTGGAGTCCCGCAGGAAAAAAGAAAGAAGAAAGATGTTGCTGACGACATGGTCGACAGAATCAGTGGATTGCCGGATGAAATTCTTGTGAGTATACTGTCTCTGTTGCCCCTGAAGGAAGCACAAGCTACTAGCATCCTTTCTAGGAGGTGGCAGTATTTGTGGGCCTATAGTACCAATCTCAACTTTGATGCTGAGAAAAATTTAATGAGATTGAAGGAGCTCAAAGGAGAAGCGTGCGAATTGGAAATGTGTAGGTACGTCAATTGGGTGGATAGTGTGTTGAAACAGCATAGAGCCTTAAACATTGAGCGATTCAGGGTTTTTTTTAAACTTGGTCCTAGAATTTGTATTGATGAATGGATTCAATTTGCAATGAGGAAAGGAGTTCAAATGCTTGAGTTGGACTTCTCTGCATATATCCGTTATCTATTGATTGGGAAATACAGATTTAATAACAAACTGTTAGGTATCAGCGAAACCTCTGGTTTGAAGTCCTTGTGTTCTGAATACATTGGTTTCAAGTGCCTCAAAGTTTTTGATTTGAAATCAGTTGATGTAGACCAAGAAGTTCTTGAGTACTTCATTTCAAACTGTCCTGTTCTCGAACGACTGGTCGTGTATGGTTCCTCATCATTGGTTAATCTGAGAGTTGTTGGTCATTCAATTGCATTGAAGTACTTGGTGATACAAAGATGTGAAAATATCAAAACCATTCAAATTTGTGATGCAAACCTAGTTTCATTTTGTTATGATGGATATGTGAGAAACTTGGTTCTTAGTAATCTTCCACTACTTGTTGAGGTTTCCATTGTTGGATGGTTGCCACATGATTTCTTAGAGATTACCTTCTTTCACCTGTCATGCTGTCTTTCTCAACTGGAGATTCTCAATCTCAATTATACGAAAGCGTGTTGTGAAAGGGATCCCATAATTCCTTCATTACCTAATCTCAAGCGTTTGGAATTAGCAATTTATGAAACTGAAAATTTTGCTCTTCTTCATCTCGCATCTTTCATAAAGAAAGCTCCTTGCATGCATACACTTGTGTTGCGGTTATCACAATCATGGAGTAAAAAAAGTCCCTTTGCCAAGAAGACAGCTGCAAAATGCTCCCATGATCGTTTAAAGGTGGTGGAAATAGTAGGGTACAGTGGCCTCAGCCGTCAGATTGAACTTGTAATGTACTTGACAAAAACTGCAAGTAATCTGGAGAAAATTGTTTTTGATTCTGTTAATTCTTGGAGGCCAAGATTCAACAGACTACGAGATCTTGTAGTGGAGAAGGAAGAATTGTCAAGAGCTCAGGCCCAGCAGCTTAAAAGAAAATTGCCAGCAACTCTAGAAGTTGTGTGCCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

461

Amino Acids

53.16

Weight (kDa)

8.97

Isoelectric Point (pI)

37.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 29 - 64 6e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 102 - 424 1.7e-31 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 126 - 252 1.8e-09 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 74
AccI GTMKAC 3 cut(s) 78, 118, 585
AciI CCGC 2 cut(s) 35, 1078
AclWI GGATC 2 cut(s) 944, 957
AcsI RAATTY 5 cut(s) 105, 226, 369, 744, 1012
AcuI CTGAAG 1 cut(s) 158
AfaI GTAC 6 cut(s) 199, 284, 605, 704, 1175, 1211
AluBI AGCT 6 cut(s) 152, 247, 1052, 1127, 1328, 1342
AluI AGCT 6 cut(s) 152, 247, 1052, 1127, 1328, 1342
Alw21I GWGCWC 2 cut(s) 249, 1330
Alw26I GTCTC 2 cut(s) 15, 129
AlwI GGATC 2 cut(s) 944, 957
AoxI GGCC 4 cut(s) 189, 1180, 1271, 1332
ApeKI GCWGC 2 cut(s) 1127, 1339
ApoI RAATTY 5 cut(s) 105, 226, 369, 744, 1012
ArsI GACNNNNNNTTYG 2 cut(s) 624, 656
Asp700I GAANNNNTTC 1 cut(s) 387
AspS9I GGNCC 3 cut(s) 189, 362, 1333
AsuHPI GGTGA 2 cut(s) 721, 872
AvaII GGWCC 1 cut(s) 362
BamHI GGATCC 1 cut(s) 949
BanII GRGCYC 2 cut(s) 249, 1330
BbsI GAAGAC 1 cut(s) 1127
Bbv12I GWGCWC 2 cut(s) 249, 1330
BbvCI CCTCAGC 1 cut(s) 1184
BbvI GCAGC 2 cut(s) 1114, 1351
BccI CCATC 2 cut(s) 773, 837
BceAI ACGGC 1 cut(s) 1173
BcoDI GTCTC 2 cut(s) 15, 129
BfaI CTAG 5 cut(s) 156, 168, 366, 761, 1367
BfmI CTRYAG 2 cut(s) 193, 1382
BglII AGATCT 1 cut(s) 1294
BisI GCNGC 2 cut(s) 1128, 1340
BlsI GCNGC 2 cut(s) 1129, 1341
BmcAI AGTACT 2 cut(s) 605, 704
Bme18I GGWCC 1 cut(s) 362
BmgT120I GGNCC 3 cut(s) 189, 362, 1333
BmiI GGNNCC 2 cut(s) 652, 951
BmsI GCATC 4 cut(s) 168, 205, 742, 1043
BpiI GAAGAC 1 cut(s) 1127
BpmI CTGGAG 3 cut(s) 48, 926, 1256
Bpu10I CCTNAGC 2 cut(s) 1184, 1329
BpuEI CTTGAG 3 cut(s) 443, 620, 962
Bse1I ACTGG 2 cut(s) 642, 909
Bse3DI GCAATG 1 cut(s) 405
BseGI GGATG 3 cut(s) 106, 159, 848
BseMI GCAATG 1 cut(s) 405
BseMII CTCAG 4 cut(s) 210, 662, 1198, 1343
BseNI ACTGG 2 cut(s) 642, 909
BseXI GCAGC 2 cut(s) 1114, 1351
BseYI CCCAGC 1 cut(s) 1335
BshFI GGCC 4 cut(s) 191, 1182, 1273, 1334
BsiHKAI GWGCWC 2 cut(s) 249, 1330
BsiSI CCGG 1 cut(s) 98
BslFI GGGAC 2 cut(s) 17, 1092
BsmAI GTCTC 2 cut(s) 15, 129
BsmFI GGGAC 2 cut(s) 17, 1092
BsnI GGCC 4 cut(s) 191, 1182, 1273, 1334
Bsp1286I GDGCHC 2 cut(s) 249, 1330
Bsp143I GATC 3 cut(s) 949, 1144, 1294
BspACI CCGC 2 cut(s) 35, 1078
BspANI GGCC 4 cut(s) 191, 1182, 1273, 1334
BspCNI CTCAG 4 cut(s) 211, 663, 1197, 1342
BspLI GGNNCC 2 cut(s) 652, 951
BspPI GGATC 2 cut(s) 944, 957
BspQI GCTCTTC 1 cut(s) 1026
BsrDI GCAATG 1 cut(s) 405
BsrI ACTGG 2 cut(s) 642, 909
BssMI GATC 3 cut(s) 949, 1144, 1294
BssNAI GTATAC 1 cut(s) 119
Bst1107I GTATAC 1 cut(s) 119
Bst4CI ACNGT 4 cut(s) 123, 489, 620, 1178
Bst6I CTCTTC 1 cut(s) 1026
BstC8I GCNNGC 3 cut(s) 262, 1061, 1359
BstDEI CTNAG 6 cut(s) 219, 671, 803, 862, 1184, 1329
BstF5I GGATG 3 cut(s) 106, 159, 848
BstKTI GATC 3 cut(s) 952, 1147, 1297
BstMAI GTCTC 2 cut(s) 15, 129
BstMBI GATC 3 cut(s) 949, 1144, 1294
BstNSI RCATGY 1 cut(s) 1063
BstSFI CTRYAG 2 cut(s) 193, 1382
BstV1I GCAGC 2 cut(s) 1114, 1351
BstV2I GAAGAC 1 cut(s) 1127
BstX2I RGATCY 2 cut(s) 949, 1294
BstYI RGATCY 2 cut(s) 949, 1294
BstZ17I GTATAC 1 cut(s) 119
BsuRI GGCC 4 cut(s) 191, 1182, 1273, 1334
BtsCI GGATG 3 cut(s) 106, 159, 848
BtsIMutI CAGTG 2 cut(s) 94, 1183
Cac8I GCNNGC 3 cut(s) 262, 1061, 1359
Cfr13I GGNCC 3 cut(s) 189, 362, 1333
Csp6I GTAC 6 cut(s) 198, 283, 604, 703, 1174, 1210
CviAII CATG 6 cut(s) 73, 854, 888, 1060, 1092, 1142
CviQI GTAC 6 cut(s) 198, 283, 604, 703, 1174, 1210
DdeI CTNAG 6 cut(s) 219, 671, 803, 862, 1184, 1329
DpnI GATC 3 cut(s) 951, 1146, 1296
DpnII GATC 3 cut(s) 949, 1144, 1294
DraI TTTAAA 2 cut(s) 355, 1152
DrdI GACNNNNNNGTC 1 cut(s) 74
DseDI GACNNNNNNGTC 1 cut(s) 74
Eam1104I CTCTTC 1 cut(s) 1026
EarI CTCTTC 1 cut(s) 1026
Ecl136II GAGCTC 2 cut(s) 247, 1328
Eco24I GRGCYC 2 cut(s) 249, 1330
Eco47I GGWCC 1 cut(s) 362
Eco53kI GAGCTC 2 cut(s) 247, 1328
Eco57I CTGAAG 1 cut(s) 158
EcoICRI GAGCTC 2 cut(s) 247, 1328
EcoT22I ATGCAT 1 cut(s) 1065
EcoT38I GRGCYC 2 cut(s) 249, 1330
FaeI CATG 6 cut(s) 76, 857, 891, 1063, 1095, 1145
FalI AAGNNNNNCTT 2 cut(s) 582, 614
FaqI GGGAC 2 cut(s) 17, 1092
FatI CATG 6 cut(s) 72, 853, 887, 1059, 1091, 1141
FauI CCCGC 1 cut(s) 42
FblI GTMKAC 3 cut(s) 78, 118, 585
Fnu4HI GCNGC 2 cut(s) 1128, 1340
FokI GGATG 3 cut(s) 113, 146, 855
FriOI GRGCYC 2 cut(s) 249, 1330
Fsp4HI GCNGC 2 cut(s) 1128, 1340
FspBI CTAG 5 cut(s) 156, 168, 366, 761, 1367
GluI GCNGC 2 cut(s) 1128, 1340
GsaI CCCAGC 1 cut(s) 1339
GsuI CTGGAG 3 cut(s) 48, 926, 1256
HaeIII GGCC 4 cut(s) 191, 1182, 1273, 1334
HapII CCGG 1 cut(s) 98
Hin1II CATG 6 cut(s) 76, 857, 891, 1063, 1095, 1145
HincII GTYRAC 1 cut(s) 79
HindII GTYRAC 1 cut(s) 79
HinfI GANTC 8 cut(s) 8, 30, 84, 339, 388, 910, 1253, 1278
HpaII CCGG 1 cut(s) 98
HphI GGTGA 2 cut(s) 721, 872
Hpy166II GTNNAC 3 cut(s) 79, 119, 586
Hpy188I TCNGA 4 cut(s) 18, 532, 672, 1194
Hpy188III TCNNGA 5 cut(s) 599, 629, 1235, 1323, 1367
Hpy8I GTNNAC 3 cut(s) 79, 119, 586
HpyAV CCTTC 5 cut(s) 133, 235, 883, 972, 1303
HpyCH4III ACNGT 4 cut(s) 123, 489, 620, 1178
HpyCH4IV ACGT 1 cut(s) 285
HpyCH4V TGCA 8 cut(s) 398, 440, 695, 755, 1059, 1063, 1130, 1226
HpyF3I CTNAG 6 cut(s) 219, 671, 803, 862, 1184, 1329
HpySE526I ACGT 1 cut(s) 285
Hsp92II CATG 6 cut(s) 76, 857, 891, 1063, 1095, 1145
Kzo9I GATC 3 cut(s) 949, 1144, 1294
LguI GCTCTTC 1 cut(s) 1026
LmnI GCTCC 3 cut(s) 244, 1057, 1142
Lsp1109I GCAGC 2 cut(s) 1114, 1351
LweI GCATC 4 cut(s) 168, 205, 742, 1043
MaeI CTAG 5 cut(s) 156, 168, 366, 761, 1367
MaeII ACGT 1 cut(s) 285
MalI GATC 3 cut(s) 951, 1146, 1296
MboI GATC 3 cut(s) 949, 1144, 1294
MboII GAAGA 6 cut(s) 64, 803, 1013, 1016, 1132, 1325
MfeI CAATTG 2 cut(s) 289, 690
MflI RGATCY 2 cut(s) 949, 1294
MhlI GDGCHC 2 cut(s) 249, 1330
MlyI GAGTC 2 cut(s) 17, 39
MmeI TCCRAC 2 cut(s) 408, 820
MnlI CCTC 8 cut(s) 165, 396, 517, 563, 664, 820, 1193, 1263
Mph1103I ATGCAT 1 cut(s) 1065
MroXI GAANNNNTTC 1 cut(s) 387
MseI TTAA 8 cut(s) 230, 326, 354, 477, 666, 1151, 1260, 1344
MslI CAYNNNNRTG 1 cut(s) 1090
MspA1I CMGCKG 1 cut(s) 1127
MspI CCGG 1 cut(s) 98
MunI CAATTG 2 cut(s) 289, 690
NdeII GATC 3 cut(s) 949, 1144, 1294
NlaIII CATG 6 cut(s) 76, 857, 891, 1063, 1095, 1145
NlaIV GGNNCC 2 cut(s) 652, 951
NsiI ATGCAT 1 cut(s) 1065
NspI RCATGY 1 cut(s) 1063
PaeI GCATGC 1 cut(s) 1063
PciSI GCTCTTC 1 cut(s) 1026
PcsI WCGNNNNNNNCGW 1 cut(s) 75
PdmI GAANNNNTTC 1 cut(s) 387
PfeI GAWTC 6 cut(s) 84, 339, 388, 910, 1253, 1278
PflFI GACNNNGTC 1 cut(s) 74
PkrI GCNGC 2 cut(s) 1129, 1341
PleI GAGTC 2 cut(s) 16, 38
PpsI GAGTC 2 cut(s) 16, 38
Psp124BI GAGCTC 2 cut(s) 249, 1330
PspFI CCCAGC 1 cut(s) 1335
PspN4I GGNNCC 2 cut(s) 652, 951
PspPI GGNCC 3 cut(s) 189, 362, 1333
PsuI RGATCY 2 cut(s) 949, 1294
PsyI GACNNNGTC 1 cut(s) 74
PvuII CAGCTG 1 cut(s) 1127
RsaI GTAC 6 cut(s) 199, 284, 605, 704, 1175, 1211
RsaNI GTAC 6 cut(s) 198, 283, 604, 703, 1174, 1210
RseI CAYNNNNRTG 1 cut(s) 1090
SacI GAGCTC 2 cut(s) 249, 1330
SalI GTCGAC 1 cut(s) 77
SapI GCTCTTC 1 cut(s) 1026
SaqAI TTAA 8 cut(s) 230, 326, 354, 477, 666, 1151, 1260, 1344
SatI GCNGC 2 cut(s) 1128, 1340
Sau3AI GATC 3 cut(s) 949, 1144, 1294
Sau96I GGNCC 3 cut(s) 189, 362, 1333
ScaI AGTACT 2 cut(s) 605, 704
SchI GAGTC 2 cut(s) 17, 39
SduI GDGCHC 2 cut(s) 249, 1330
SfaNI GCATC 4 cut(s) 168, 205, 742, 1043
SfcI CTRYAG 2 cut(s) 193, 1382
SinI GGWCC 1 cut(s) 362
SmiMI CAYNNNNRTG 1 cut(s) 1090
SmlI CTYRAG 3 cut(s) 422, 599, 977
SmoI CTYRAG 3 cut(s) 422, 599, 977
SphI GCATGC 1 cut(s) 1063
SsiI CCGC 2 cut(s) 35, 1078
SspMI CTAG 5 cut(s) 156, 168, 366, 761, 1367
SstI GAGCTC 2 cut(s) 249, 1330
TaaI ACNGT 4 cut(s) 123, 489, 620, 1178
TaiI ACGT 1 cut(s) 288
TaqI TCGA 2 cut(s) 78, 630
TatI WGTACW 3 cut(s) 603, 702, 1209
TfiI GAWTC 6 cut(s) 84, 339, 388, 910, 1253, 1278
Tru1I TTAA 8 cut(s) 230, 326, 354, 477, 666, 1151, 1260, 1344
Tru9I TTAA 8 cut(s) 230, 326, 354, 477, 666, 1151, 1260, 1344
TscAI CASTG 2 cut(s) 94, 1183
TseI GCWGC 2 cut(s) 1127, 1339
TspDTI ATGAA 8 cut(s) 117, 396, 598, 756, 954, 1016, 1017, 1030
TspGWI ACGGA 1 cut(s) 437
TspRI CASTG 2 cut(s) 94, 1183
Tth111I GACNNNGTC 1 cut(s) 74
VpaK11BI GGWCC 1 cut(s) 362
XapI RAATTY 5 cut(s) 105, 226, 369, 744, 1012
XbaI TCTAGA 1 cut(s) 1366
XceI RCATGY 1 cut(s) 1063
XmiI GTMKAC 3 cut(s) 78, 118, 585
XmnI GAANNNNTTC 1 cut(s) 387
XspI CTAG 5 cut(s) 156, 168, 366, 761, 1367
ZrmI AGTACT 2 cut(s) 605, 704
Zsp2I ATGCAT 1 cut(s) 1065
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.