RchiOBHm_Chr7g0197551

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000095
Physical Location & Seq
Forward (+)
15495337 .. 15497911
2575 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17674

Sequence Viewer

Length: 1422 bp
ATGGCGGAACCAAGCAACAAGGGTGGTTACAATTTGAGAAAGAGAAGGAAAACATGTGCTGTGGTGGATAGAATCAGTGGAATGCCGGATGAAATTGTAGTGAGTATACTGTCTTTCTTGCCCCTGAAGGAAGCACAGGCTACTTGCATCTTGTCTAGGAGATGGCATTATGTGTGGGCGTCTCTCATGACTCTCAACTTTGACACCAAGAAAAGGTTGAGCACCTTGAAGGGTCTGAAGCCGAAAGAACGAGACCAGGGCCTTATCAAGAGGTATGCTAAGTGGGTCAACAGCGTGGTTGAACAGCATAGAGCCCCATGCATTGACCAGTTCCGTGTTTCGTTTTATCTAGACAAGAGTTTTTCGACTTCTATTGATAAGTGGGTTGAGTTTGCACTGAAAAAGGGTGTTCAAATGCTGGAGCTGAATTTGTTAGAATATGTCTATTATTGCAAGATCAAACCGGGATATCCTTTTCCCCAGCAACTTTTGGGTCTCAACAGAGAAGGTGCAGAGTCTGCTTGGAAGCACTTGTGTCGTGATGGTCCAAGTCATCAACCCTGCGTGTGCGTTGGCTTGAAGTCACTCAGGGTTCTTACCTTGGAATGTGTTGACATCTCTGGAGACGTTCTCGAGTACTTTTTGCGCACTTGTCCGGTTCTGGAAAGGGTTTCGGTGTATGGTTCCTCAACATTGGTTTATCTACGAGTTGTCGGTCCATCAATTGCATTGAAGCACTTAGTGATACAAAGATGTAGCAACGTCGTAGGCATTGAGATTGTTGATGCAGATGTCATTTCCTTTACTTATGATGGTGGAGAGGGAATACATTTGCGTCTTGAGAATGTGCCGCATCTTGTTGAGGTATCCATTTATGAGCACCGTGAATATTACTCTTTTTTAAGCATTGATGTTCTCTTTGCCAGCCTTTCCTCCTGTGTTTCTCAGCTGGAGATTCTGAAAATGAATAATACGATACTGTACTACAGGGAGAGTTATATGGTTCCCATGTTACCAAATCTCAAGCTTTTGGGATTATCCTTTAAAGATGATGAGGCACTAATGCAATTGGCTTCCTTCTTGAAATCATCTCCTTGTGTTGAAAGGCTTGTGATACATTTGCACTACTCAATATCAAATCGAAAAAAATGCCACTTTAAGAATAAGAAAGCTGCCAAATGCTCCCATGCAGATCTCAAGGCCGTGAAATTGGTAGGTTATGATGGCAGCACGCGCGAAGATGAAATTGTCAAGTACTTGACAAAAACTGCGATCAACTTGGAACAAATTGTTATCGATCCTGCCCGGAATTGGCTTTATAGAATACCAAAAAGGAAGGATGCAATGAGAAGAGAAGAACAAGTAAGGGCTCATTTTCGGCAGCTCAAAGTGCCTTCAAATATAGACTTTGTATGCTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

473

Amino Acids

54.31

Weight (kDa)

9.19

Isoelectric Point (pI)

37.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 25 - 62 1.6e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 108 - 439 7.3e-30 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 125 - 372 3e-14 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 647
AccI GTMKAC 1 cut(s) 106
AccII CGCG 2 cut(s) 1234, 1236
AciI CCGC 2 cut(s) 5, 851
AclWI GGATC 1 cut(s) 1292
AcsI RAATTY 1 cut(s) 427
AcuI CTGAAG 2 cut(s) 146, 257
AcyI GRCGYC 1 cut(s) 179
AdeI CACNNNGTG 1 cut(s) 742
AfaI GTAC 3 cut(s) 638, 983, 1256
AfiI CCNNNNNNNGG 2 cut(s) 213, 1311
AflIII ACRYGT 1 cut(s) 53
AgsI TTSAA 8 cut(s) 229, 302, 413, 580, 733, 1084, 1103, 1398
AjnI CCWGG 1 cut(s) 255
AluBI AGCT 5 cut(s) 424, 949, 1027, 1172, 1384
AluI AGCT 5 cut(s) 424, 949, 1027, 1172, 1384
Alw21I GWGCWC 2 cut(s) 224, 882
Alw26I GTCTC 4 cut(s) 186, 246, 500, 618
AlwI GGATC 1 cut(s) 1292
AlwNI CAGNNNCTG 1 cut(s) 518
Ama87I CYCGRG 1 cut(s) 632
AoxI GGCC 2 cut(s) 259, 1200
ApeKI GCWGC 3 cut(s) 1172, 1227, 1381
ApoI RAATTY 1 cut(s) 427
AspLEI GCGC 2 cut(s) 648, 1236
AspS9I GGNCC 3 cut(s) 259, 545, 716
AsuC2I CCSGG 2 cut(s) 465, 1306
AvaI CYCGRG 1 cut(s) 632
AvaII GGWCC 2 cut(s) 545, 716
BanII GRGCYC 2 cut(s) 316, 1372
Bbv12I GWGCWC 2 cut(s) 224, 882
BbvI GCAGC 3 cut(s) 1159, 1239, 1393
BccI CCATC 5 cut(s) 156, 536, 727, 806, 1217
BceAI ACGGC 1 cut(s) 1187
BcgI CGANNNNNNTGC 4 cut(s) 518, 552, 1131, 1165
BciT130I CCWGG 1 cut(s) 257
BciVI GTATCC 1 cut(s) 877
BcnI CCSGG 2 cut(s) 465, 1306
BcoDI GTCTC 4 cut(s) 186, 246, 500, 618
BfaI CTAG 2 cut(s) 156, 350
BfmI CTRYAG 1 cut(s) 985
BfuI GTATCC 1 cut(s) 877
BglII AGATCT 1 cut(s) 1192
BisI GCNGC 4 cut(s) 851, 1173, 1228, 1382
BlsI GCNGC 4 cut(s) 852, 1174, 1229, 1383
BmcAI AGTACT 2 cut(s) 638, 1256
Bme1390I CCNGG 3 cut(s) 257, 465, 1306
Bme18I GGWCC 2 cut(s) 545, 716
BmeT110I CYCGRG 1 cut(s) 632
BmgT120I GGNCC 3 cut(s) 259, 545, 716
BmiI GGNNCC 3 cut(s) 9, 685, 1005
BmrFI CCNGG 3 cut(s) 257, 465, 1306
BmsI GCATC 4 cut(s) 156, 775, 862, 1330
BplI GAGNNNNNCTC 2 cut(s) 615, 647
BpmI CTGGAG 3 cut(s) 440, 642, 971
BpuEI CTTGAG 3 cut(s) 860, 1007, 1181
BpuMI CCSGG 2 cut(s) 465, 1306
Bsa29I ATCGAT 1 cut(s) 1296
BsaHI GRCGYC 1 cut(s) 179
BsaI GGTCTC 2 cut(s) 246, 500
BsaJI CCNNGG 2 cut(s) 256, 600
BsaWI WCCGGW 1 cut(s) 655
Bsc4I CCNNNNNNNGG 2 cut(s) 213, 1311
Bse1I ACTGG 1 cut(s) 328
Bse3DI GCAATG 1 cut(s) 1350
BseBI CCWGG 1 cut(s) 257
BseCI ATCGAT 1 cut(s) 1296
BseDI CCNNGG 2 cut(s) 256, 600
BseGI GGATG 2 cut(s) 94, 1345
BseLI CCNNNNNNNGG 2 cut(s) 213, 1311
BseMI GCAATG 1 cut(s) 1350
BseMII CTCAG 2 cut(s) 601, 959
BseNI ACTGG 1 cut(s) 328
BseXI GCAGC 3 cut(s) 1159, 1239, 1393
BseYI CCCAGC 1 cut(s) 480
BsgI GTGCAG 1 cut(s) 531
Bsh1236I CGCG 2 cut(s) 1234, 1236
BshFI GGCC 2 cut(s) 261, 1202
BshVI ATCGAT 1 cut(s) 1296
BsiHKAI GWGCWC 2 cut(s) 224, 882
BsiHKCI CYCGRG 1 cut(s) 632
BsiSI CCGG 4 cut(s) 86, 464, 656, 1306
BslI CCNNNNNNNGG 2 cut(s) 213, 1311
BsmAI GTCTC 4 cut(s) 186, 246, 500, 618
BsmBI CGTCTC 2 cut(s) 186, 618
BsmI GAATGC 1 cut(s) 87
BsnI GGCC 2 cut(s) 261, 1202
Bso31I GGTCTC 2 cut(s) 246, 500
BsoBI CYCGRG 1 cut(s) 632
Bsp1286I GDGCHC 4 cut(s) 224, 316, 882, 1372
Bsp143I GATC 4 cut(s) 456, 1192, 1272, 1297
BspACI CCGC 2 cut(s) 5, 851
BspANI GGCC 2 cut(s) 261, 1202
BspCNI CTCAG 2 cut(s) 600, 958
BspDI ATCGAT 1 cut(s) 1296
BspFNI CGCG 2 cut(s) 1234, 1236
BspHI TCATGA 1 cut(s) 186
BspLI GGNNCC 3 cut(s) 9, 685, 1005
BspPI GGATC 1 cut(s) 1292
BspTNI GGTCTC 2 cut(s) 246, 500
BsrDI GCAATG 1 cut(s) 1350
BsrI ACTGG 1 cut(s) 328
BssECI CCNNGG 2 cut(s) 256, 600
BssMI GATC 4 cut(s) 456, 1192, 1272, 1297
BssNAI GTATAC 1 cut(s) 107
BssNI GRCGYC 1 cut(s) 179
BssT1I CCWWGG 1 cut(s) 600
Bst1107I GTATAC 1 cut(s) 107
Bst2UI CCWGG 1 cut(s) 257
Bst4CI ACNGT 3 cut(s) 111, 884, 981
Bst6I CTCTTC 1 cut(s) 1345
BstACI GRCGYC 1 cut(s) 179
BstAPI GCANNNNNTGC 1 cut(s) 518
BstC8I GCNNGC 2 cut(s) 925, 1232
BstDEI CTNAG 4 cut(s) 279, 587, 739, 945
BstF5I GGATG 2 cut(s) 94, 1345
BstFNI CGCG 2 cut(s) 1234, 1236
BstHHI GCGC 2 cut(s) 648, 1236
BstKTI GATC 4 cut(s) 459, 1195, 1275, 1300
BstMAI GTCTC 4 cut(s) 186, 246, 500, 618
BstMBI GATC 4 cut(s) 456, 1192, 1272, 1297
BstMWI GCNNNNNNNGC 3 cut(s) 518, 1233, 1390
BstNI CCWGG 1 cut(s) 257
BstNSI RCATGY 1 cut(s) 57
BstSCI CCNGG 3 cut(s) 255, 463, 1304
BstSFI CTRYAG 1 cut(s) 985
BstUI CGCG 2 cut(s) 1234, 1236
BstV1I GCAGC 3 cut(s) 1159, 1239, 1393
BstX2I RGATCY 1 cut(s) 1192
BstYI RGATCY 1 cut(s) 1192
BstZ17I GTATAC 1 cut(s) 107
Bsu15I ATCGAT 1 cut(s) 1296
BsuI GTATCC 1 cut(s) 877
BsuRI GGCC 2 cut(s) 261, 1202
BsuTUI ATCGAT 1 cut(s) 1296
BtsCI GGATG 2 cut(s) 94, 1345
BtsIMutI CAGTG 2 cut(s) 82, 395
Cac8I GCNNGC 2 cut(s) 925, 1232
CaiI CAGNNNCTG 1 cut(s) 518
CciI TCATGA 1 cut(s) 186
CfoI GCGC 2 cut(s) 648, 1236
Cfr13I GGNCC 3 cut(s) 259, 545, 716
ClaI ATCGAT 1 cut(s) 1296
CseI GACGC 2 cut(s) 168, 824
Csp6I GTAC 3 cut(s) 637, 982, 1255
CspCI CAANNNNNGTGG 2 cut(s) 4, 39
CviAII CATG 5 cut(s) 54, 187, 318, 1009, 1187
CviQI GTAC 3 cut(s) 637, 982, 1255
DdeI CTNAG 4 cut(s) 279, 587, 739, 945
DpnI GATC 4 cut(s) 458, 1194, 1274, 1299
DpnII GATC 4 cut(s) 456, 1192, 1272, 1297
DraI TTTAAA 1 cut(s) 1045
DraIII CACNNNGTG 1 cut(s) 742
Eam1104I CTCTTC 1 cut(s) 1345
EarI CTCTTC 1 cut(s) 1345
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 600
Eco24I GRGCYC 2 cut(s) 316, 1372
Eco31I GGTCTC 2 cut(s) 246, 500
Eco32I GATATC 1 cut(s) 470
Eco47I GGWCC 2 cut(s) 545, 716
Eco57I CTGAAG 2 cut(s) 146, 257
Eco88I CYCGRG 1 cut(s) 632
EcoO109I RGGNCCY 1 cut(s) 259
EcoRII CCWGG 1 cut(s) 255
EcoRV GATATC 1 cut(s) 470
EcoT14I CCWWGG 1 cut(s) 600
EcoT22I ATGCAT 1 cut(s) 323
EcoT38I GRGCYC 2 cut(s) 316, 1372
ErhI CCWWGG 1 cut(s) 600
Esp3I CGTCTC 2 cut(s) 186, 618
FaeI CATG 5 cut(s) 57, 190, 321, 1012, 1190
FatI CATG 5 cut(s) 53, 186, 317, 1008, 1186
FblI GTMKAC 1 cut(s) 106
Fnu4HI GCNGC 4 cut(s) 851, 1173, 1228, 1382
FokI GGATG 2 cut(s) 101, 1352
FriOI GRGCYC 2 cut(s) 316, 1372
Fsp4HI GCNGC 4 cut(s) 851, 1173, 1228, 1382
FspBI CTAG 2 cut(s) 156, 350
FspI TGCGCA 1 cut(s) 647
GlaI GCGC 2 cut(s) 647, 1235
GluI GCNGC 4 cut(s) 851, 1173, 1228, 1382
GsaI CCCAGC 1 cut(s) 484
GsuI CTGGAG 3 cut(s) 440, 642, 971
HaeIII GGCC 2 cut(s) 261, 1202
HapII CCGG 4 cut(s) 86, 464, 656, 1306
HgaI GACGC 2 cut(s) 168, 824
HhaI GCGC 2 cut(s) 648, 1236
Hin1I GRCGYC 1 cut(s) 179
Hin1II CATG 5 cut(s) 57, 190, 321, 1012, 1190
Hin6I GCGC 2 cut(s) 646, 1234
HinP1I GCGC 2 cut(s) 646, 1234
HincII GTYRAC 2 cut(s) 289, 613
HindII GTYRAC 2 cut(s) 289, 613
HindIII AAGCTT 1 cut(s) 1025
HinfI GANTC 4 cut(s) 72, 190, 515, 955
HpaII CCGG 4 cut(s) 86, 464, 656, 1306
Hpy166II GTNNAC 3 cut(s) 107, 289, 613
Hpy188I TCNGA 2 cut(s) 237, 960
Hpy188III TCNNGA 9 cut(s) 187, 268, 350, 539, 621, 632, 662, 839, 1081
Hpy8I GTNNAC 3 cut(s) 107, 289, 613
Hpy99I CGWCG 1 cut(s) 767
HpyAV CCTTC 7 cut(s) 39, 121, 223, 500, 1087, 1330, 1404
HpyCH4III ACNGT 3 cut(s) 111, 884, 981
HpyCH4IV ACGT 2 cut(s) 627, 762
HpyF10VI GCNNNNNNNGC 3 cut(s) 518, 1233, 1390
HpyF3I CTNAG 4 cut(s) 279, 587, 739, 945
HpySE526I ACGT 2 cut(s) 627, 762
Hsp92I GRCGYC 1 cut(s) 179
Hsp92II CATG 5 cut(s) 57, 190, 321, 1012, 1190
HspAI GCGC 2 cut(s) 646, 1234
Kzo9I GATC 4 cut(s) 456, 1192, 1272, 1297
LmnI GCTCC 2 cut(s) 421, 1187
Lsp1109I GCAGC 3 cut(s) 1159, 1239, 1393
LweI GCATC 4 cut(s) 156, 775, 862, 1330
MaeI CTAG 2 cut(s) 156, 350
MaeII ACGT 2 cut(s) 627, 762
MaeIII GTNAC 3 cut(s) 26, 582, 1011
MalI GATC 4 cut(s) 458, 1194, 1274, 1299
MboI GATC 4 cut(s) 456, 1192, 1272, 1297
MboII GAAGA 3 cut(s) 1250, 1362, 1367
MfeI CAATTG 2 cut(s) 723, 1067
MflI RGATCY 1 cut(s) 1192
MhlI GDGCHC 4 cut(s) 224, 316, 882, 1372
MluCI AATT 9 cut(s) 31, 93, 427, 723, 1067, 1208, 1245, 1287, 1309
MlyI GAGTC 2 cut(s) 184, 524
MnlI CCTC 6 cut(s) 264, 697, 814, 856, 943, 1048
Mph1103I ATGCAT 1 cut(s) 323
MseI TTAA 3 cut(s) 902, 1044, 1158
MspA1I CMGCKG 1 cut(s) 949
MspI CCGG 4 cut(s) 86, 464, 656, 1306
MspR9I CCNGG 3 cut(s) 257, 465, 1306
MunI CAATTG 2 cut(s) 723, 1067
Mva1269I GAATGC 1 cut(s) 87
MvaI CCWGG 1 cut(s) 257
MvnI CGCG 2 cut(s) 1234, 1236
MwoI GCNNNNNNNGC 3 cut(s) 518, 1233, 1390
NciI CCSGG 2 cut(s) 465, 1306
NdeII GATC 4 cut(s) 456, 1192, 1272, 1297
NlaIII CATG 5 cut(s) 57, 190, 321, 1012, 1190
NlaIV GGNNCC 3 cut(s) 9, 685, 1005
NmuCI GTSAC 1 cut(s) 582
NsbI TGCGCA 1 cut(s) 647
NsiI ATGCAT 1 cut(s) 323
NspI RCATGY 1 cut(s) 57
PaeR7I CTCGAG 1 cut(s) 632
PagI TCATGA 1 cut(s) 186
PciI ACATGT 1 cut(s) 53
PctI GAATGC 1 cut(s) 87
PfeI GAWTC 2 cut(s) 72, 955
PkrI GCNGC 4 cut(s) 852, 1174, 1229, 1383
PleI GAGTC 2 cut(s) 184, 523
PpsI GAGTC 2 cut(s) 184, 523
PscI ACATGT 1 cut(s) 53
Psp6I CCWGG 1 cut(s) 255
PspFI CCCAGC 1 cut(s) 480
PspGI CCWGG 1 cut(s) 255
PspN4I GGNNCC 3 cut(s) 9, 685, 1005
PspPI GGNCC 3 cut(s) 259, 545, 716
PstNI CAGNNNCTG 1 cut(s) 518
PsuI RGATCY 1 cut(s) 1192
PvuII CAGCTG 1 cut(s) 949
RsaI GTAC 3 cut(s) 638, 983, 1256
RsaNI GTAC 3 cut(s) 637, 982, 1255
SaqAI TTAA 3 cut(s) 902, 1044, 1158
SatI GCNGC 4 cut(s) 851, 1173, 1228, 1382
Sau3AI GATC 4 cut(s) 456, 1192, 1272, 1297
Sau96I GGNCC 3 cut(s) 259, 545, 716
ScaI AGTACT 2 cut(s) 638, 1256
SchI GAGTC 2 cut(s) 184, 524
ScrFI CCNGG 3 cut(s) 257, 465, 1306
SduI GDGCHC 4 cut(s) 224, 316, 882, 1372
SfaNI GCATC 4 cut(s) 156, 775, 862, 1330
SfcI CTRYAG 1 cut(s) 985
Sfr274I CTCGAG 1 cut(s) 632
SinI GGWCC 2 cut(s) 545, 716
SlaI CTCGAG 1 cut(s) 632
SmlI CTYRAG 4 cut(s) 632, 839, 1022, 1196
SmoI CTYRAG 4 cut(s) 632, 839, 1022, 1196
Sse9I AATT 9 cut(s) 31, 93, 427, 723, 1067, 1208, 1245, 1287, 1309
SsiI CCGC 2 cut(s) 5, 851
SspI AATATT 1 cut(s) 890
SspMI CTAG 2 cut(s) 156, 350
StyD4I CCNGG 3 cut(s) 255, 463, 1304
StyI CCWWGG 1 cut(s) 600
TaaI ACNGT 3 cut(s) 111, 884, 981
TaiI ACGT 2 cut(s) 630, 765
TaqI TCGA 4 cut(s) 365, 633, 1141, 1296
TaqII GACCGA 1 cut(s) 704
TasI AATT 9 cut(s) 31, 93, 427, 723, 1067, 1208, 1245, 1287, 1309
TatI WGTACW 3 cut(s) 636, 981, 1254
TauI GCSGC 1 cut(s) 853
TfiI GAWTC 2 cut(s) 72, 955
Tru1I TTAA 3 cut(s) 902, 1044, 1158
Tru9I TTAA 3 cut(s) 902, 1044, 1158
TscAI CASTG 2 cut(s) 82, 402
TseFI GTSAC 1 cut(s) 582
TseI GCWGC 3 cut(s) 1172, 1227, 1381
Tsp45I GTSAC 1 cut(s) 582
TspDTI ATGAA 3 cut(s) 105, 980, 1257
TspGWI ACGGA 1 cut(s) 323
TspRI CASTG 2 cut(s) 82, 402
VpaK11BI GGWCC 2 cut(s) 545, 716
XapI RAATTY 1 cut(s) 427
XbaI TCTAGA 1 cut(s) 349
XceI RCATGY 1 cut(s) 57
XhoI CTCGAG 1 cut(s) 632
XmiI GTMKAC 1 cut(s) 106
XspI CTAG 2 cut(s) 156, 350
ZrmI AGTACT 2 cut(s) 638, 1256
Zsp2I ATGCAT 1 cut(s) 323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.