Rroxscaffold_6G00427640

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000095
Physical Location & Seq
Reverse (-)
48222591 .. 48224392
1802 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00427640.1

Sequence Viewer

Length: 1545 bp
ATGTTTCTTATTGGTGTTGTTGGTCGATCAATCTATCAGAAGCATGAGAAAAGAAGCAAGCTGAAGAAAAAAGAAAACTTGGGAAAGAAACAGAAAGACAAGGGTGAGTTCAGCTCCGGGGATCGAAATGGTGGGGTCAGCTATGTGGATAGAATCAGTGAGTTGCCGGATGGGATTCTTGTTAGTATCTTGTCTTGCTTGCTTTTCAAGGAAGCAGCAGCTACTAGTGTCCTATCAAGGCGGTGGCGGGATCTGTGGACATCTACTATGAATCTCAACTTTGAAGATGAGAAAAATTCAAGGGATTTCATGGAAGTGAAGCCGAATATACAACACAGGAAGCGCCGTAGTTTTGTCAGTTTGGTGGATCGTGCATTGCAACAGCATACAGGCCCATTGATTGAACGGTTCAGGGCTTGCTTTTTTCTAGATCGTCGCTTTGCGCGATCCATTGATGGATGGATTGAGTTTGCAATGAAAAAGAGGGTTCAAATACTTGAGCTGGAGTTTTCAGCAGCTAATGTTAAGGATAACTATACATTTTCCCATGACCTACTAGGTCTTGAAACAGGGTCTACTCGAAAGGACTTACATTCTGGCATCCCAAGTCTACACTCTTCTGGATGCAGTATTGGTTTCAAGTCACTAAAAGTTCTTAATTTGCGACATGTTAATGTGGATGGCGAAGTTCTTGAGTACTTATTAATGAACTGTCCAGTCGAAAGAGTATCAGTGGTGGCAGCCAAAAATTTGGTTGATATAAGAGTTGTTAGTCCATCCATTGCATGGAAGTATTTGGCGATAGAAAATTGTCCTGACCTCAAAACCATTGAGATCTGTAATGCAGACATTGTTTCATTTACTTACATTGGAGTTGCTATAAACCTGCTTCTGAGTAATGTACCTTTGCTTGCTGAGGTATCCATTACTGAGCTCGAGATTGAGAGCAACAACTTTTTCGATTCTATAACTATATCCGTAGAGCTTCCCTTCACCCAACTCTCATGCTATCTTTCTCAGCTGAAGTATCTCACGATGGATATCAGTGAAGCGGTCTACAATCAGGATTATGTGTTTCCTATATTAGCAAATCTCAAGTATTTGGAATTAATATGTGAACCACATTATGCGTCCTCTCTTCGTTATTTGACTTCTTTCATGAAGGCATCTCCTTACTTGCAGAGACTAGTGTTGAAGATGAATATCATCACATCGTGGTTGGAGGAGATGGGAATAGGAAAAACAGACATGGAGGAGATTGTGACAACAGAGCAAATGGAGACTCTTGCCAAATGCCCTCATCATGAGCTCAGAGTAATAGAAATAGTTGGGTATCGTGCTGGTAGAGTTGCTGCTAAACATGTCATGCTTTTATTAAAGAATGCTGTTGCACTGGAGAAACTTGTTATTGATCCTGTCCGGCATCGGTCTCGTGGGCCGAGTATGGTAAAGGAAGATATTGATGAGGAAATGAAGGCGAGAAATCATGCTATGAAACACCTTAAGAAAATTGTTCCTTCAACTGTAAACTTTGTATGCCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

514

Amino Acids

58.6

Weight (kDa)

8.62

Isoelectric Point (pI)

46.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 52 - 89 2.8e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 143 - 511 7.7e-32 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 151 - 262 9.4e-07 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 894
AccB7I CCANNNNNTGG 1 cut(s) 786
AccI GTMKAC 3 cut(s) 575, 610, 1056
AccII CGCG 1 cut(s) 445
AciI CCGC 3 cut(s) 241, 247, 1052
AclWI GGATC 5 cut(s) 129, 258, 375, 441, 1406
AcsI RAATTY 2 cut(s) 295, 748
AcuI CTGAAG 2 cut(s) 83, 1043
AdeI CACNNNGTG 1 cut(s) 1215
AfaI GTAC 2 cut(s) 698, 903
AfiI CCNNNNNNNGG 1 cut(s) 786
AflII CTTAAG 1 cut(s) 1502
AflIII ACRYGT 2 cut(s) 667, 1360
AgsI TTSAA 9 cut(s) 208, 284, 300, 404, 491, 566, 640, 1195, 1521
AhlI ACTAGT 2 cut(s) 224, 1186
Alw21I GWGCWC 2 cut(s) 936, 1311
Alw26I GTCTC 3 cut(s) 1177, 1274, 1434
AlwI GGATC 5 cut(s) 129, 258, 375, 441, 1406
Ama87I CYCGRG 1 cut(s) 935
AoxI GGCC 2 cut(s) 391, 1436
ApeKI GCWGC 5 cut(s) 215, 218, 515, 740, 1352
ApoI RAATTY 2 cut(s) 295, 748
AseI ATTAAT 2 cut(s) 704, 1109
AspLEI GCGC 2 cut(s) 345, 445
AspS9I GGNCC 2 cut(s) 392, 1436
AsuC2I CCSGG 1 cut(s) 118
AsuHPI GGTGA 2 cut(s) 116, 985
AvaI CYCGRG 1 cut(s) 935
BanII GRGCYC 2 cut(s) 936, 1311
BauI CACGAG 1 cut(s) 1431
Bbv12I GWGCWC 2 cut(s) 936, 1311
BbvCI CCTCAGC 1 cut(s) 915
BbvI GCAGC 5 cut(s) 227, 230, 527, 752, 1339
BccI CCATC 7 cut(s) 164, 449, 453, 674, 784, 1030, 1222
BceAI ACGGC 1 cut(s) 330
BcgI CGANNNNNNTGC 2 cut(s) 1412, 1446
BciVI GTATCC 1 cut(s) 931
BcnI CCSGG 1 cut(s) 118
BcoDI GTCTC 3 cut(s) 1177, 1274, 1434
BcuI ACTAGT 2 cut(s) 224, 1186
BfaI CTAG 4 cut(s) 225, 428, 557, 1187
BfmI CTRYAG 1 cut(s) 1541
BfoI RGCGCY 1 cut(s) 346
BfrI CTTAAG 1 cut(s) 1502
BfuAI ACCTGC 1 cut(s) 894
BfuI GTATCC 1 cut(s) 931
BglII AGATCT 1 cut(s) 834
BisI GCNGC 5 cut(s) 216, 219, 516, 741, 1353
BlsI GCNGC 5 cut(s) 217, 220, 517, 742, 1354
BmcAI AGTACT 1 cut(s) 698
Bme1390I CCNGG 1 cut(s) 118
BmeT110I CYCGRG 1 cut(s) 935
BmgT120I GGNCC 2 cut(s) 392, 1436
BmrFI CCNGG 1 cut(s) 118
BmsI GCATC 4 cut(s) 609, 614, 1175, 1432
BplI GAGNNNNNCTC 2 cut(s) 98, 130
BpmI CTGGAG 2 cut(s) 524, 1415
Bpu10I CCTNAGC 1 cut(s) 915
BpuEI CTTGAG 3 cut(s) 518, 713, 1079
BpuMI CCSGG 1 cut(s) 118
BsaBI GATNNNNATC 2 cut(s) 1040, 1202
BsaI GGTCTC 1 cut(s) 1434
BsaJI CCNNGG 1 cut(s) 117
Bsc4I CCNNNNNNNGG 1 cut(s) 786
Bse1I ACTGG 2 cut(s) 716, 1398
Bse3DI GCAATG 3 cut(s) 374, 480, 780
Bse8I GATNNNNATC 2 cut(s) 1040, 1202
BseDI CCNNGG 1 cut(s) 117
BseGI GGATG 6 cut(s) 175, 464, 600, 629, 685, 776
BseJI GATNNNNATC 2 cut(s) 1040, 1202
BseLI CCNNNNNNNGG 1 cut(s) 786
BseMI GCAATG 3 cut(s) 374, 480, 780
BseMII CTCAG 5 cut(s) 884, 906, 921, 1031, 1324
BseNI ACTGG 2 cut(s) 716, 1398
BseRI GAGGAG 2 cut(s) 1238, 1268
BseXI GCAGC 5 cut(s) 227, 230, 527, 752, 1339
Bsh1236I CGCG 1 cut(s) 445
BshFI GGCC 2 cut(s) 393, 1438
BsiHKAI GWGCWC 2 cut(s) 936, 1311
BsiHKCI CYCGRG 1 cut(s) 935
BsiSI CCGG 3 cut(s) 117, 167, 1420
BslI CCNNNNNNNGG 1 cut(s) 786
BsmAI GTCTC 3 cut(s) 1177, 1274, 1434
BsmI GAATGC 1 cut(s) 1387
BsnI GGCC 2 cut(s) 393, 1438
Bso31I GGTCTC 1 cut(s) 1434
BsoBI CYCGRG 1 cut(s) 935
Bsp1286I GDGCHC 2 cut(s) 936, 1311
Bsp143I GATC 8 cut(s) 26, 121, 250, 367, 430, 446, 834, 1411
BspACI CCGC 3 cut(s) 241, 247, 1052
BspANI GGCC 2 cut(s) 393, 1438
BspCNI CTCAG 5 cut(s) 885, 907, 922, 1030, 1323
BspFNI CGCG 1 cut(s) 445
BspHI TCATGA 2 cut(s) 1158, 1303
BspMI ACCTGC 1 cut(s) 894
BspPI GGATC 5 cut(s) 129, 258, 375, 441, 1406
BspTI CTTAAG 1 cut(s) 1502
BspTNI GGTCTC 1 cut(s) 1434
BsrDI GCAATG 3 cut(s) 374, 480, 780
BsrI ACTGG 2 cut(s) 716, 1398
BssECI CCNNGG 1 cut(s) 117
BssMI GATC 8 cut(s) 26, 121, 250, 367, 430, 446, 834, 1411
BssSI CACGAG 1 cut(s) 1431
Bst2BI CACGAG 1 cut(s) 1431
Bst4CI ACNGT 3 cut(s) 408, 713, 1525
Bst6I CTCTTC 2 cut(s) 622, 1143
BstAFI CTTAAG 1 cut(s) 1502
BstC8I GCNNGC 4 cut(s) 59, 200, 418, 912
BstDEI CTNAG 5 cut(s) 893, 915, 930, 1017, 1310
BstF5I GGATG 6 cut(s) 175, 464, 600, 629, 685, 776
BstFNI CGCG 1 cut(s) 445
BstH2I RGCGCY 1 cut(s) 346
BstHHI GCGC 2 cut(s) 345, 445
BstKTI GATC 8 cut(s) 29, 124, 253, 370, 433, 449, 837, 1414
BstMAI GTCTC 3 cut(s) 1177, 1274, 1434
BstMBI GATC 8 cut(s) 26, 121, 250, 367, 430, 446, 834, 1411
BstNSI RCATGY 2 cut(s) 671, 1364
BstSCI CCNGG 1 cut(s) 116
BstSFI CTRYAG 1 cut(s) 1541
BstUI CGCG 1 cut(s) 445
BstV1I GCAGC 5 cut(s) 227, 230, 527, 752, 1339
BstX2I RGATCY 2 cut(s) 250, 834
BstXI CCANNNNNNTGG 1 cut(s) 751
BstYI RGATCY 2 cut(s) 250, 834
BsuI GTATCC 1 cut(s) 931
BsuRI GGCC 2 cut(s) 393, 1438
BtsCI GGATG 6 cut(s) 175, 464, 600, 629, 685, 776
BtsIMutI CAGTG 4 cut(s) 163, 738, 1051, 1391
BveI ACCTGC 1 cut(s) 894
Cac8I GCNNGC 4 cut(s) 59, 200, 418, 912
CciI TCATGA 2 cut(s) 1158, 1303
CfoI GCGC 2 cut(s) 345, 445
Cfr13I GGNCC 2 cut(s) 392, 1436
CseI GACGC 1 cut(s) 1119
Csp6I GTAC 2 cut(s) 697, 902
CviQI GTAC 2 cut(s) 697, 902
DdeI CTNAG 5 cut(s) 893, 915, 930, 1017, 1310
DpnI GATC 8 cut(s) 28, 123, 252, 369, 432, 448, 836, 1413
DpnII GATC 8 cut(s) 26, 121, 250, 367, 430, 446, 834, 1411
DraIII CACNNNGTG 1 cut(s) 1215
Eam1104I CTCTTC 2 cut(s) 622, 1143
EarI CTCTTC 2 cut(s) 622, 1143
Ecl136II GAGCTC 2 cut(s) 934, 1309
Eco24I GRGCYC 2 cut(s) 936, 1311
Eco31I GGTCTC 1 cut(s) 1434
Eco32I GATATC 1 cut(s) 1042
Eco53kI GAGCTC 2 cut(s) 934, 1309
Eco57I CTGAAG 2 cut(s) 83, 1043
Eco88I CYCGRG 1 cut(s) 935
EcoICRI GAGCTC 2 cut(s) 934, 1309
EcoRV GATATC 1 cut(s) 1042
EcoT38I GRGCYC 2 cut(s) 936, 1311
FauI CCCGC 1 cut(s) 240
FblI GTMKAC 3 cut(s) 575, 610, 1056
Fnu4HI GCNGC 5 cut(s) 216, 219, 516, 741, 1353
FokI GGATG 6 cut(s) 182, 471, 587, 636, 692, 763
FriOI GRGCYC 2 cut(s) 936, 1311
Fsp4HI GCNGC 5 cut(s) 216, 219, 516, 741, 1353
FspBI CTAG 4 cut(s) 225, 428, 557, 1187
GlaI GCGC 2 cut(s) 344, 444
GluI GCNGC 5 cut(s) 216, 219, 516, 741, 1353
GsuI CTGGAG 2 cut(s) 524, 1415
HaeII RGCGCY 1 cut(s) 346
HaeIII GGCC 2 cut(s) 393, 1438
HapII CCGG 3 cut(s) 117, 167, 1420
HgaI GACGC 1 cut(s) 1119
HhaI GCGC 2 cut(s) 345, 445
Hin6I GCGC 2 cut(s) 343, 443
HinP1I GCGC 2 cut(s) 343, 443
HinfI GANTC 5 cut(s) 153, 175, 271, 962, 1282
HpaII CCGG 3 cut(s) 117, 167, 1420
HphI GGTGA 2 cut(s) 116, 985
Hpy166II GTNNAC 6 cut(s) 258, 576, 611, 1057, 1118, 1528
Hpy188I TCNGA 3 cut(s) 39, 894, 1313
Hpy8I GTNNAC 6 cut(s) 258, 576, 611, 1057, 1118, 1528
Hpy99I CGWCG 1 cut(s) 438
HpyAV CCTTC 4 cut(s) 1000, 1156, 1468, 1527
HpyCH4III ACNGT 3 cut(s) 408, 713, 1525
HpyCH4V TGCA 8 cut(s) 374, 379, 473, 627, 785, 845, 1180, 1391
HpyF3I CTNAG 5 cut(s) 893, 915, 930, 1017, 1310
HspAI GCGC 2 cut(s) 343, 443
Kzo9I GATC 8 cut(s) 26, 121, 250, 367, 430, 446, 834, 1411
LmnI GCTCC 1 cut(s) 119
Lsp1109I GCAGC 5 cut(s) 227, 230, 527, 752, 1339
LweI GCATC 4 cut(s) 609, 614, 1175, 1432
MaeI CTAG 4 cut(s) 225, 428, 557, 1187
MaeIII GTNAC 2 cut(s) 642, 1261
MalI GATC 8 cut(s) 28, 123, 252, 369, 432, 448, 836, 1413
MboI GATC 8 cut(s) 26, 121, 250, 367, 430, 446, 834, 1411
MboII GAAGA 6 cut(s) 76, 296, 609, 1130, 1207, 1466
MflI RGATCY 2 cut(s) 250, 834
MhlI GDGCHC 2 cut(s) 936, 1311
MluCI AATT 6 cut(s) 295, 658, 748, 808, 1106, 1509
MlyI GAGTC 1 cut(s) 1276
MmeI TCCRAC 1 cut(s) 1200
MnlI CCTC 8 cut(s) 477, 830, 910, 1144, 1216, 1246, 1308, 1459
MseI TTAA 7 cut(s) 525, 657, 672, 704, 1109, 1376, 1503
MslI CAYNNNNRTG 2 cut(s) 314, 672
MspA1I CMGCKG 1 cut(s) 1021
MspCI CTTAAG 1 cut(s) 1502
MspI CCGG 3 cut(s) 117, 167, 1420
MspR9I CCNGG 1 cut(s) 118
Mva1269I GAATGC 1 cut(s) 1387
MvnI CGCG 1 cut(s) 445
NciI CCSGG 1 cut(s) 118
NdeII GATC 8 cut(s) 26, 121, 250, 367, 430, 446, 834, 1411
NmeAIII GCCGAG 1 cut(s) 1464
NmuCI GTSAC 2 cut(s) 642, 1261
NspI RCATGY 2 cut(s) 671, 1364
PaeR7I CTCGAG 1 cut(s) 935
PagI TCATGA 2 cut(s) 1158, 1303
PciI ACATGT 2 cut(s) 667, 1360
PcsI WCGNNNNNNNCGW 1 cut(s) 442
PctI GAATGC 1 cut(s) 1387
PfeI GAWTC 4 cut(s) 153, 175, 271, 962
PflMI CCANNNNNTGG 1 cut(s) 786
PkrI GCNGC 5 cut(s) 217, 220, 517, 742, 1354
PleI GAGTC 1 cut(s) 1276
PpsI GAGTC 1 cut(s) 1276
PscI ACATGT 2 cut(s) 667, 1360
PshBI ATTAAT 2 cut(s) 704, 1109
Psp124BI GAGCTC 2 cut(s) 936, 1311
PspPI GGNCC 2 cut(s) 392, 1436
PsuI RGATCY 2 cut(s) 250, 834
PvuII CAGCTG 1 cut(s) 1021
RsaI GTAC 2 cut(s) 698, 903
RsaNI GTAC 2 cut(s) 697, 902
RseI CAYNNNNRTG 2 cut(s) 314, 672
SacI GAGCTC 2 cut(s) 936, 1311
SaqAI TTAA 7 cut(s) 525, 657, 672, 704, 1109, 1376, 1503
SatI GCNGC 5 cut(s) 216, 219, 516, 741, 1353
Sau3AI GATC 8 cut(s) 26, 121, 250, 367, 430, 446, 834, 1411
Sau96I GGNCC 2 cut(s) 392, 1436
ScaI AGTACT 1 cut(s) 698
SchI GAGTC 1 cut(s) 1276
ScrFI CCNGG 1 cut(s) 118
SduI GDGCHC 2 cut(s) 936, 1311
SfaNI GCATC 4 cut(s) 609, 614, 1175, 1432
SfcI CTRYAG 1 cut(s) 1541
Sfr274I CTCGAG 1 cut(s) 935
SlaI CTCGAG 1 cut(s) 935
SmiMI CAYNNNNRTG 2 cut(s) 314, 672
SmlI CTYRAG 5 cut(s) 497, 692, 935, 1094, 1502
SmoI CTYRAG 5 cut(s) 497, 692, 935, 1094, 1502
SpeI ACTAGT 2 cut(s) 224, 1186
Sse9I AATT 6 cut(s) 295, 658, 748, 808, 1106, 1509
SsiI CCGC 3 cut(s) 241, 247, 1052
SspMI CTAG 4 cut(s) 225, 428, 557, 1187
SstI GAGCTC 2 cut(s) 936, 1311
StyD4I CCNGG 1 cut(s) 116
TaaI ACNGT 3 cut(s) 408, 713, 1525
TaqI TCGA 6 cut(s) 25, 124, 580, 720, 936, 960
TaqII GACCGA 1 cut(s) 1416
TasI AATT 6 cut(s) 295, 658, 748, 808, 1106, 1509
TatI WGTACW 1 cut(s) 696
TfiI GAWTC 4 cut(s) 153, 175, 271, 962
Tru1I TTAA 7 cut(s) 525, 657, 672, 704, 1109, 1376, 1503
Tru9I TTAA 7 cut(s) 525, 657, 672, 704, 1109, 1376, 1503
TscAI CASTG 4 cut(s) 163, 738, 1051, 1398
TseFI GTSAC 2 cut(s) 642, 1261
TseI GCWGC 5 cut(s) 215, 218, 515, 740, 1352
Tsp45I GTSAC 2 cut(s) 642, 1261
TspGWI ACGGA 1 cut(s) 967
TspRI CASTG 4 cut(s) 163, 738, 1051, 1398
Van91I CCANNNNNTGG 1 cut(s) 786
Vha464I CTTAAG 1 cut(s) 1502
VspI ATTAAT 2 cut(s) 704, 1109
XapI RAATTY 2 cut(s) 295, 748
XbaI TCTAGA 1 cut(s) 427
XceI RCATGY 2 cut(s) 671, 1364
XcmI CCANNNNNNNNNTGG 1 cut(s) 783
XhoI CTCGAG 1 cut(s) 935
XmiI GTMKAC 3 cut(s) 575, 610, 1056
XspI CTAG 4 cut(s) 225, 428, 557, 1187
ZrmI AGTACT 1 cut(s) 698
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.