FvH4_2g38801

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000095
Physical Location & Seq
Reverse (-)
28004088 .. 28006598
2511 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g38801.t1

Sequence Viewer

Length: 1422 bp
ATGTCCTATAGAGCTTCTCACGTTGCTCAGCCTGAGGAGGAGGATGTGCAAAACTTGGTGGTAGCGGTGGACAGAATCAGTGCATTGCCAAATGATCTTCTAGTTAGTATAGTGTCTCTGTTGAACCTAAAGGAAGCAGCAGCTACGAGTGTTCTGTCTACTCGATGGCGCCATATCTGGACCTTCGTTACCACTCTCGATTTTCACCATGATGTTCTTTTCCGACTGCGTTCATTCAGACGAGTAGAAATAGAGTCGGAACTTGATAGGTACTTGAATTGGGTGAATAGTGTAGTGAAACAACATAGAGGCTCAACTATCAAACTGCTCAGGGTTTATGCCGAAATAAATAATAATCCCAAGTTTGACAGTTCCATTTATTCATGGGTTCGATTCGCATTGGAAAACAGAGTCCAACGCTTTGAGTTGCTCATTTATAAAGACAGGGTTTTGCGTGGTGCAAACGAGATCAAAGCGGATTTTATTACTTTTCCCCATTCGTACCAACTTTTAAATGTGGACATAGCAGACCCTGTGAATCACTTGTTCTATAAACCTCATAATTGTTGTATTAGTGCATTCAGTGGCTCGAAGTACCTCAGAGCTTTAGATTTCAGGTATGTTACAGGACTTACTGAACGAGTTCTGGAGTTCTTATTGTCTCACTGCCCTGTTCTTGAGCGATTAACAGTGGTTGGCCATGTGAGGTTGCATAGTTTTAAAGTCACCGGTCCATCGATTGTCTTGAAATACTTAAACATACATGAACATTCCGGTCTTGCGAGCATTGAGATTTGTGATGTAAACCTTGTTTCGTTTAGTTATGGTGGGGAGGAGATTAAGTTGCTGCTTAGGAATGTGCCACAGCTTGTTGAGGTCTCCATTTCTTCCCGTCGACTTTCAGTTGGACAGTGTGATTCTCAGCTTTCTCAGCTAGAGGTTTTCAGACTGAGCAAATTTGTGCTAAACAATGATGAACATGTATTTCCTACATATGTAAATCTCAAGCATTTGGAACTAGGATTGAAGGAACGTGACCATAGCTGTCTTCTTCAACTGGCTTCTTTCATGAGAGCATCTCCTTATTTGCACAAACTTGTATTGAAGTTGTCTGCGACTATCTCTTCATGTTATTTTGGAGATTTGGAGATTAAGCAAGCTCCCAAACACTCCCGTCAATACCTTAGGGTAGTGGAAGTGGCAGGGTATCATGGTCGTATCAGCGATTTCGAACTTGTCAGATACTTGATAGAGAATGCTGTTGAACTAGAAAAACTTGTTATCCATCCTGTTCGAGGGTGGTATTCTTATAACAGCAGAAGTATTGCGGAGAGGAAAGAAAAGAAGGAAAGAAAACAAGCTACTCAGCAGCTTAAAGAACTAGTACTGCCTTCTACTTTTGAATTCATATGCAGGCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

474

Amino Acids

54.78

Weight (kDa)

8.93

Isoelectric Point (pI)

39.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 26 - 61 2.5e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 98 - 441 8.9e-28 At1g61320/AtMIF1, LRR domain
FBD PF08387 392 - 428 8.6e-07 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 438, 1311
AccB1I GGYRCC 1 cut(s) 168
AccI GTMKAC 2 cut(s) 158, 895
AciI CCGC 3 cut(s) 65, 476, 1328
AcoI YGGCCR 1 cut(s) 697
AcsI RAATTY 2 cut(s) 956, 1403
AcyI GRCGYC 1 cut(s) 169
AfaI GTAC 4 cut(s) 272, 503, 596, 1386
AfiI CCNNNNNNNGG 1 cut(s) 1295
AflIII ACRYGT 1 cut(s) 979
AgeI ACCGGT 1 cut(s) 728
AgsI TTSAA 8 cut(s) 124, 277, 748, 1027, 1055, 1105, 1265, 1403
AhlI ACTAGT 1 cut(s) 1381
Alw26I GTCTC 3 cut(s) 120, 666, 883
AlwNI CAGNNNCTG 1 cut(s) 533
AoxI GGCC 1 cut(s) 697
ApeKI GCWGC 4 cut(s) 137, 140, 847, 1369
ApoI RAATTY 2 cut(s) 956, 1403
AsiGI ACCGGT 1 cut(s) 728
Asp700I GAANNNNTTC 1 cut(s) 642
AspLEI GCGC 1 cut(s) 171
AspS9I GGNCC 2 cut(s) 180, 731
AsuHPI GGTGA 3 cut(s) 197, 295, 718
AsuII TTCGAA 1 cut(s) 1230
AvaII GGWCC 2 cut(s) 180, 731
AxyI CCTNAGG 2 cut(s) 33, 1184
BalI TGGCCA 1 cut(s) 699
BanI GGYRCC 1 cut(s) 168
BbsI GAAGAC 1 cut(s) 1040
BbvI GCAGC 4 cut(s) 149, 152, 834, 1381
BccI CCATC 3 cut(s) 159, 742, 1293
BcoDI GTCTC 3 cut(s) 120, 666, 883
BcuI ACTAGT 1 cut(s) 1381
BfaI CTAG 5 cut(s) 101, 935, 1019, 1268, 1382
BfmI CTRYAG 2 cut(s) 7, 1418
BfoI RGCGCY 1 cut(s) 172
BisI GCNGC 4 cut(s) 138, 141, 848, 1370
BlpI GCTNAGC 1 cut(s) 27
BlsI GCNGC 4 cut(s) 139, 142, 849, 1371
BmcAI AGTACT 1 cut(s) 1386
Bme18I GGWCC 2 cut(s) 180, 731
BmgT120I GGNCC 2 cut(s) 180, 731
BmiI GGNNCC 1 cut(s) 170
BmsI GCATC 1 cut(s) 1085
BpiI GAAGAC 1 cut(s) 1040
BplI GAGNNNNNCTC 2 cut(s) 1063, 1095
BpmI CTGGAG 1 cut(s) 668
Bpu10I CCTNAGC 2 cut(s) 329, 851
Bpu1102I GCTNAGC 1 cut(s) 27
Bpu14I TTCGAA 1 cut(s) 1230
BpuEI CTTGAG 2 cut(s) 698, 989
Bsa29I ATCGAT 1 cut(s) 737
BsaHI GRCGYC 1 cut(s) 169
BsaI GGTCTC 1 cut(s) 883
BsaWI WCCGGW 2 cut(s) 728, 773
BsaXI ACNNNNNCTCC 2 cut(s) 827, 857
Bsc4I CCNNNNNNNGG 1 cut(s) 1295
Bse118I RCCGGY 1 cut(s) 728
Bse1I ACTGG 1 cut(s) 1062
Bse21I CCTNAGG 2 cut(s) 33, 1184
Bse3DI GCAATG 1 cut(s) 83
BseCI ATCGAT 1 cut(s) 737
BseGI GGATG 2 cut(s) 49, 1285
BseLI CCNNNNNNNGG 1 cut(s) 1295
BseMI GCAATG 1 cut(s) 83
BseMII CTCAG 8 cut(s) 24, 41, 343, 613, 935, 941, 944, 1379
BseNI ACTGG 1 cut(s) 1062
BseRI GAGGAG 3 cut(s) 50, 53, 848
BseXI GCAGC 4 cut(s) 149, 152, 834, 1381
BshFI GGCC 1 cut(s) 699
BshNI GGYRCC 1 cut(s) 168
BshTI ACCGGT 1 cut(s) 728
BshVI ATCGAT 1 cut(s) 737
BsiSI CCGG 2 cut(s) 729, 774
BslI CCNNNNNNNGG 1 cut(s) 1295
BsmAI GTCTC 3 cut(s) 120, 666, 883
BsmI GAATGC 2 cut(s) 578, 1261
BsnI GGCC 1 cut(s) 699
Bso31I GGTCTC 1 cut(s) 883
Bsp119I TTCGAA 1 cut(s) 1230
Bsp143I GATC 2 cut(s) 94, 468
Bsp1720I GCTNAGC 1 cut(s) 27
BspACI CCGC 3 cut(s) 65, 476, 1328
BspANI GGCC 1 cut(s) 699
BspCNI CTCAG 8 cut(s) 25, 40, 342, 612, 934, 942, 943, 1378
BspDI ATCGAT 1 cut(s) 737
BspHI TCATGA 1 cut(s) 1068
BspLI GGNNCC 1 cut(s) 170
BspT104I TTCGAA 1 cut(s) 1230
BspT107I GGYRCC 1 cut(s) 168
BspTNI GGTCTC 1 cut(s) 883
BsrDI GCAATG 1 cut(s) 83
BsrFI RCCGGY 1 cut(s) 728
BsrI ACTGG 1 cut(s) 1062
BssAI RCCGGY 1 cut(s) 728
BssMI GATC 2 cut(s) 94, 468
BssNI GRCGYC 1 cut(s) 169
Bst4CI ACNGT 3 cut(s) 371, 691, 912
Bst6I CTCTTC 1 cut(s) 1129
BstACI GRCGYC 1 cut(s) 169
BstBI TTCGAA 1 cut(s) 1230
BstC8I GCNNGC 3 cut(s) 784, 1158, 1415
BstENI CCTNNNNNAGG 1 cut(s) 1293
BstF5I GGATG 2 cut(s) 49, 1285
BstH2I RGCGCY 1 cut(s) 172
BstHHI GCGC 1 cut(s) 171
BstKTI GATC 2 cut(s) 97, 471
BstMAI GTCTC 3 cut(s) 120, 666, 883
BstMBI GATC 2 cut(s) 94, 468
BstMWI GCNNNNNNNGC 1 cut(s) 931
BstNSI RCATGY 1 cut(s) 983
BstSFI CTRYAG 2 cut(s) 7, 1418
BstV1I GCAGC 4 cut(s) 149, 152, 834, 1381
BstV2I GAAGAC 1 cut(s) 1040
Bsu15I ATCGAT 1 cut(s) 737
Bsu36I CCTNAGG 2 cut(s) 33, 1184
BsuRI GGCC 1 cut(s) 699
BsuTUI ATCGAT 1 cut(s) 737
BtsCI GGATG 2 cut(s) 49, 1285
BtsI GCAGTG 1 cut(s) 664
BtsIMutI CAGTG 5 cut(s) 85, 589, 664, 696, 917
Cac8I GCNNGC 3 cut(s) 784, 1158, 1415
CaiI CAGNNNCTG 1 cut(s) 533
CciI TCATGA 1 cut(s) 1068
CfoI GCGC 1 cut(s) 171
Cfr10I RCCGGY 1 cut(s) 728
Cfr13I GGNCC 2 cut(s) 180, 731
ClaI ATCGAT 1 cut(s) 737
Csp6I GTAC 4 cut(s) 271, 502, 595, 1385
CspAI ACCGGT 1 cut(s) 728
CviAII CATG 8 cut(s) 209, 384, 701, 764, 980, 1069, 1128, 1211
CviQI GTAC 4 cut(s) 271, 502, 595, 1385
DinI GGCGCC 1 cut(s) 170
DpnI GATC 2 cut(s) 96, 470
DpnII GATC 2 cut(s) 94, 468
DraI TTTAAA 2 cut(s) 513, 721
EaeI YGGCCR 1 cut(s) 697
Eam1104I CTCTTC 1 cut(s) 1129
EarI CTCTTC 1 cut(s) 1129
Eco31I GGTCTC 1 cut(s) 883
Eco47I GGWCC 2 cut(s) 180, 731
Eco81I CCTNAGG 2 cut(s) 33, 1184
EcoNI CCTNNNNNAGG 1 cut(s) 1293
EcoRI GAATTC 1 cut(s) 1403
EgeI GGCGCC 1 cut(s) 170
EheI GGCGCC 1 cut(s) 170
FaeI CATG 8 cut(s) 212, 387, 704, 767, 983, 1072, 1131, 1214
FatI CATG 8 cut(s) 208, 383, 700, 763, 979, 1068, 1127, 1210
FauNDI CATATG 2 cut(s) 994, 1409
FblI GTMKAC 2 cut(s) 158, 895
Fnu4HI GCNGC 4 cut(s) 138, 141, 848, 1370
FokI GGATG 2 cut(s) 56, 1272
Fsp4HI GCNGC 4 cut(s) 138, 141, 848, 1370
FspBI CTAG 5 cut(s) 101, 935, 1019, 1268, 1382
GlaI GCGC 1 cut(s) 170
GluI GCNGC 4 cut(s) 138, 141, 848, 1370
GsuI CTGGAG 1 cut(s) 668
HaeII RGCGCY 1 cut(s) 172
HaeIII GGCC 1 cut(s) 699
HapII CCGG 2 cut(s) 729, 774
HhaI GCGC 1 cut(s) 171
Hin1I GRCGYC 1 cut(s) 169
Hin1II CATG 8 cut(s) 212, 387, 704, 767, 983, 1072, 1131, 1214
Hin6I GCGC 1 cut(s) 169
HinP1I GCGC 1 cut(s) 169
HincII GTYRAC 1 cut(s) 896
HindII GTYRAC 1 cut(s) 896
HinfI GANTC 6 cut(s) 75, 254, 393, 411, 538, 917
HpaII CCGG 2 cut(s) 729, 774
HphI GGTGA 3 cut(s) 197, 295, 718
Hpy166II GTNNAC 5 cut(s) 70, 159, 520, 805, 896
Hpy188I TCNGA 6 cut(s) 224, 239, 259, 602, 947, 1241
Hpy188III TCNNGA 6 cut(s) 178, 197, 647, 677, 745, 1069
Hpy8I GTNNAC 5 cut(s) 70, 159, 520, 805, 896
Hpy99I CGWCG 1 cut(s) 897
HpyAV CCTTC 4 cut(s) 193, 1021, 1339, 1401
HpyCH4III ACNGT 3 cut(s) 371, 691, 912
HpyCH4IV ACGT 2 cut(s) 21, 1033
HpyCH4V TGCA 7 cut(s) 49, 83, 461, 578, 712, 1090, 1413
HpyF10VI GCNNNNNNNGC 1 cut(s) 931
HpySE526I ACGT 2 cut(s) 21, 1033
Hsp92I GRCGYC 1 cut(s) 169
Hsp92II CATG 8 cut(s) 212, 387, 704, 767, 983, 1072, 1131, 1214
HspAI GCGC 1 cut(s) 169
KasI GGCGCC 1 cut(s) 168
Kzo9I GATC 2 cut(s) 94, 468
LmnI GCTCC 1 cut(s) 1165
Lsp1109I GCAGC 4 cut(s) 149, 152, 834, 1381
LweI GCATC 1 cut(s) 1085
MaeI CTAG 5 cut(s) 101, 935, 1019, 1268, 1382
MaeII ACGT 2 cut(s) 21, 1033
MaeIII GTNAC 4 cut(s) 187, 622, 724, 1034
MalI GATC 2 cut(s) 96, 470
MboI GATC 2 cut(s) 94, 468
MboII GAAGA 5 cut(s) 89, 879, 1040, 1043, 1116
MlsI TGGCCA 1 cut(s) 699
MluCI AATT 4 cut(s) 277, 562, 956, 1403
MluNI TGGCCA 1 cut(s) 699
Mly113I GGCGCC 1 cut(s) 169
MlyI GAGTC 2 cut(s) 263, 420
MmeI TCCRAC 4 cut(s) 237, 247, 439, 886
Mox20I TGGCCA 1 cut(s) 699
MroXI GAANNNNTTC 1 cut(s) 642
MscI TGGCCA 1 cut(s) 699
MseI TTAA 7 cut(s) 512, 686, 720, 755, 840, 1152, 1374
MslI CAYNNNNRTG 1 cut(s) 210
Msp20I TGGCCA 1 cut(s) 699
MspI CCGG 2 cut(s) 729, 774
Mva1269I GAATGC 2 cut(s) 578, 1261
MwoI GCNNNNNNNGC 1 cut(s) 931
NarI GGCGCC 1 cut(s) 169
NdeI CATATG 2 cut(s) 994, 1409
NdeII GATC 2 cut(s) 94, 468
NlaIII CATG 8 cut(s) 212, 387, 704, 767, 983, 1072, 1131, 1214
NlaIV GGNNCC 1 cut(s) 170
NmuCI GTSAC 2 cut(s) 724, 1034
NspI RCATGY 1 cut(s) 983
NspV TTCGAA 1 cut(s) 1230
PagI TCATGA 1 cut(s) 1068
PciI ACATGT 1 cut(s) 979
PctI GAATGC 2 cut(s) 578, 1261
PdmI GAANNNNTTC 1 cut(s) 642
PfeI GAWTC 4 cut(s) 75, 393, 538, 917
PinAI ACCGGT 1 cut(s) 728
PkrI GCNGC 4 cut(s) 139, 142, 849, 1371
PleI GAGTC 2 cut(s) 262, 419
PluTI GGCGCC 1 cut(s) 172
PpsI GAGTC 2 cut(s) 262, 419
PscI ACATGT 1 cut(s) 979
PsiI TTATAA 2 cut(s) 438, 1311
PspN4I GGNNCC 1 cut(s) 170
PspPI GGNCC 2 cut(s) 180, 731
PstNI CAGNNNCTG 1 cut(s) 533
RsaI GTAC 4 cut(s) 272, 503, 596, 1386
RsaNI GTAC 4 cut(s) 271, 502, 595, 1385
RseI CAYNNNNRTG 1 cut(s) 210
SalI GTCGAC 1 cut(s) 894
SaqAI TTAA 7 cut(s) 512, 686, 720, 755, 840, 1152, 1374
SatI GCNGC 4 cut(s) 138, 141, 848, 1370
Sau3AI GATC 2 cut(s) 94, 468
Sau96I GGNCC 2 cut(s) 180, 731
ScaI AGTACT 1 cut(s) 1386
SchI GAGTC 2 cut(s) 263, 420
SfaNI GCATC 1 cut(s) 1085
SfcI CTRYAG 2 cut(s) 7, 1418
SfoI GGCGCC 1 cut(s) 170
SfuI TTCGAA 1 cut(s) 1230
SinI GGWCC 2 cut(s) 180, 731
SmiMI CAYNNNNRTG 1 cut(s) 210
SmlI CTYRAG 2 cut(s) 677, 1004
SmoI CTYRAG 2 cut(s) 677, 1004
SpeI ACTAGT 1 cut(s) 1381
Sse9I AATT 4 cut(s) 277, 562, 956, 1403
SsiI CCGC 3 cut(s) 65, 476, 1328
SspDI GGCGCC 1 cut(s) 168
SspMI CTAG 5 cut(s) 101, 935, 1019, 1268, 1382
TaaI ACNGT 3 cut(s) 371, 691, 912
TaiI ACGT 2 cut(s) 24, 1036
TaqI TCGA 8 cut(s) 163, 198, 391, 590, 737, 895, 1230, 1294
TasI AATT 4 cut(s) 277, 562, 956, 1403
TatI WGTACW 1 cut(s) 1384
TfiI GAWTC 4 cut(s) 75, 393, 538, 917
Tru1I TTAA 7 cut(s) 512, 686, 720, 755, 840, 1152, 1374
Tru9I TTAA 7 cut(s) 512, 686, 720, 755, 840, 1152, 1374
TscAI CASTG 5 cut(s) 85, 589, 671, 696, 917
TseFI GTSAC 2 cut(s) 724, 1034
TseI GCWGC 4 cut(s) 137, 140, 847, 1369
Tsp45I GTSAC 2 cut(s) 724, 1034
TspDTI ATGAA 7 cut(s) 222, 372, 780, 990, 1057, 1116, 1396
TspRI CASTG 5 cut(s) 85, 589, 671, 696, 917
VpaK11BI GGWCC 2 cut(s) 180, 731
XagI CCTNNNNNAGG 1 cut(s) 1293
XapI RAATTY 2 cut(s) 956, 1403
XceI RCATGY 1 cut(s) 983
XmiI GTMKAC 2 cut(s) 158, 895
XmnI GAANNNNTTC 1 cut(s) 642
XspI CTAG 5 cut(s) 101, 935, 1019, 1268, 1382
ZrmI AGTACT 1 cut(s) 1386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.