Prupe.6G354300_v2.0.a1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000095
Physical Location & Seq
Forward (+)
30123561 .. 30125669
2109 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G354300.2

Sequence Viewer

Length: 1518 bp
ATGATCAGACAGATTCATAACATGGAAAATCCATTCCCAGATGTAACCAAGGAAACAGTCCAAGACAAGGGCCAACTCATCTATTATTATGATTATACAGAGGAAGAGGATGCAAAGAGAAGGAAGACTACGACTAAGGGTGGGGGGCAAAAACACAACTGGATGATATCTATAGACCGAATTAGTCACTTACCTGATGAAATTCTTGTTAGTATATTGTCTCTATTGTCGCTCAAGGAAGCAGCAATTACTAGTCTCCTTTCTAAGCGATGGCAACACCTATGGGCGTCTACTGACACCCTTGACTTTGATTCCAAGTTGGATGTTGGTAACAATGTTCGCTTATTTAGACGCCTCACACCAGAGTTAAGACACAAGAAAAGCCTTGGATACGTCGATTGGGTGAGTCGTGTAATGGAACAACATGAAGGTCCAAACATGAAACGATTCAGGGCTTGTTTTTATCTTGATCGTCGTTTCACCACTTCCATTGACAGATGGATTCAAATTGCAAAGACAAAGGGAGTTGAAATACTTGAGTTGGAGTTTTTTTTAGGAGACGGGGTCATTGACAAAGGTCACTATGCTTTTCCTTACAAAGTATTAGGTCTTGAAAAAGGACCTAATTGTTTTGGACACAATATTATTGGATTTAAGTCGCTCAAAGTAGTTAATTTCAAACATGTTGATGTGGCCGAAGAAATTCTCCAGTACTTGTTGTCTAACTGTCCAGGTCTTGAACAGTTAACAGTGTATGCTTCCTCAAATTTGGCAAATCTAAGAGTTGTTGGTTCATCATCGGCTGCATTGAAGTACCTAGCAATAAAACATTGTTGTTGCCTTGAAAGCATTCAGATTCGTGAAGTAGCAAACCTTGTTTCCTTTACTTACCATGGAGGTTCGGTACGCTTGCTTCTCAGTGATGTACCGTTGCTCACTGAAGTATCCATTGAAGAGGCTGACTGGGGTACCGTTGATTCGATAAGGGTTGTGTTGCCTCAACTTTCATGCTGTATTCTTTCTCAGCTAGAGATTCTCATGTTGGATATCACCCCAATGACACTGGACGACGATGATTTTGGCCCACTTCAGAATCATGCATTTCCTATATTAGCAAATCTCAAGCATTTGGAATTAATAGTTGAAGCAGATTATTGCTGGTCTCTTCATCACTTAAGTTCTTTCATGAAGGTATCTCCTTACTTGCAGAGACTTGTGTTGAAGATGAAATTCGTAACATGGAGGCGACCAAAAATAAAGACAGCTGCCAAATGCCCCCATCCTTACCTCAGGGTAGTAGAAATAGTAGGGTATCGTGGCCGTGCATGTGCAGCTAAACATGTCATGTACCTAATGAAGAATGCAATTTCACTGGAGAAAATTGTTATTGATCCTGTTCTCAACCATTCAACAGATAAGAGAGTTGAAGAAGTGAAAGAGGAAGTGTTTGCAAAATATCATGCTATGCAACATATTAAAAACAAAGTGCCATCTACAATTGAATTTGTATGTATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

506

Amino Acids

57.92

Weight (kDa)

8.31

Isoelectric Point (pI)

47.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 968
AccB1I GGYRCC 1 cut(s) 968
AccI GTMKAC 1 cut(s) 290
AclWI GGATC 1 cut(s) 1385
AcoI YGGCCR 2 cut(s) 693, 1318
AcsI RAATTY 5 cut(s) 201, 702, 766, 1229, 1502
AcuI CTGAAG 2 cut(s) 960, 1073
AcyI GRCGYC 2 cut(s) 287, 352
AfaI GTAC 6 cut(s) 713, 815, 906, 927, 970, 1349
AfiI CCNNNNNNNGG 1 cut(s) 67
AflII CTTAAG 1 cut(s) 1174
AflIII ACRYGT 2 cut(s) 682, 1339
AhlI ACTAGT 1 cut(s) 251
AjnI CCWGG 1 cut(s) 730
AluBI AGCT 3 cut(s) 1027, 1265, 1334
AluI AGCT 3 cut(s) 1027, 1265, 1334
Alw26I GTCTC 5 cut(s) 225, 260, 552, 1167, 1204
AlwI GGATC 1 cut(s) 1385
AoxI GGCC 4 cut(s) 70, 693, 1081, 1318
ApeKI GCWGC 4 cut(s) 242, 803, 1265, 1331
ApoI RAATTY 5 cut(s) 201, 702, 766, 1229, 1502
ArsI GACNNNNNNTTYG 2 cut(s) 1061, 1093
AseI ATTAAT 1 cut(s) 1136
Asp700I GAANNNNTTC 3 cut(s) 446, 702, 849
Asp718I GGTACC 1 cut(s) 968
AspS9I GGNCC 4 cut(s) 70, 431, 620, 1082
AsuHPI GGTGA 3 cut(s) 415, 472, 1042
AvaII GGWCC 2 cut(s) 431, 620
AxyI CCTNAGG 1 cut(s) 1289
BaeI ACNNNNGTAYC 4 cut(s) 927, 952, 960, 985
BanI GGYRCC 1 cut(s) 968
BarI GAAGNNNNNNTAC 4 cut(s) 112, 144, 897, 929
BbsI GAAGAC 1 cut(s) 131
BbvI GCAGC 4 cut(s) 254, 790, 1252, 1343
BccI CCATC 4 cut(s) 264, 492, 1287, 1498
BceAI ACGGC 1 cut(s) 1305
BciT130I CCWGG 1 cut(s) 732
BciVI GTATCC 2 cut(s) 383, 955
BclI TGATCA 1 cut(s) 3
BcoDI GTCTC 5 cut(s) 225, 260, 552, 1167, 1204
BcuI ACTAGT 1 cut(s) 251
BfaI CTAG 3 cut(s) 252, 818, 1028
BfmI CTRYAG 1 cut(s) 171
BfrI CTTAAG 1 cut(s) 1174
BfuI GTATCC 2 cut(s) 383, 955
BisI GCNGC 4 cut(s) 243, 804, 1266, 1332
BlsI GCNGC 4 cut(s) 244, 805, 1267, 1333
BmcAI AGTACT 1 cut(s) 713
Bme1390I CCNGG 1 cut(s) 732
Bme18I GGWCC 2 cut(s) 431, 620
BmgT120I GGNCC 4 cut(s) 70, 431, 620, 1082
BmiI GGNNCC 1 cut(s) 970
BmrFI CCNGG 1 cut(s) 732
BmrI ACTGGG 1 cut(s) 973
BmsI GCATC 1 cut(s) 100
BmuI ACTGGG 1 cut(s) 973
BoxI GACNNNNGTC 1 cut(s) 576
BpiI GAAGAC 1 cut(s) 131
BpmI CTGGAG 2 cut(s) 692, 1394
BpuEI CTTGAG 3 cut(s) 218, 557, 1106
BsaHI GRCGYC 2 cut(s) 287, 352
BsaI GGTCTC 1 cut(s) 1167
BsaJI CCNNGG 3 cut(s) 48, 385, 892
BsaXI ACNNNNNCTCC 4 cut(s) 549, 579, 888, 918
Bsc4I CCNNNNNNNGG 1 cut(s) 67
Bse1I ACTGG 5 cut(s) 164, 709, 968, 1068, 1377
Bse21I CCTNAGG 1 cut(s) 1289
BseBI CCWGG 1 cut(s) 732
BseDI CCNNGG 3 cut(s) 48, 385, 892
BseGI GGATG 4 cut(s) 115, 168, 328, 1279
BseLI CCNNNNNNNGG 1 cut(s) 67
BseMII CTCAG 3 cut(s) 931, 1037, 1303
BseNI ACTGG 5 cut(s) 164, 709, 968, 1068, 1377
BseXI GCAGC 4 cut(s) 254, 790, 1252, 1343
BsgI GTGCAG 1 cut(s) 1350
BshFI GGCC 4 cut(s) 72, 695, 1083, 1320
BshNI GGYRCC 1 cut(s) 968
BslI CCNNNNNNNGG 1 cut(s) 67
BsmAI GTCTC 5 cut(s) 225, 260, 552, 1167, 1204
BsmBI CGTCTC 1 cut(s) 552
BsmI GAATGC 2 cut(s) 849, 1366
BsnI GGCC 4 cut(s) 72, 695, 1083, 1320
Bso31I GGTCTC 1 cut(s) 1167
Bsp143I GATC 3 cut(s) 3, 469, 1390
Bsp19I CCATGG 1 cut(s) 892
BspANI GGCC 4 cut(s) 72, 695, 1083, 1320
BspCNI CTCAG 3 cut(s) 930, 1036, 1302
BspHI TCATGA 1 cut(s) 1185
BspLI GGNNCC 1 cut(s) 970
BspPI GGATC 1 cut(s) 1385
BspT107I GGYRCC 1 cut(s) 968
BspTI CTTAAG 1 cut(s) 1174
BspTNI GGTCTC 1 cut(s) 1167
BsrI ACTGG 5 cut(s) 164, 709, 968, 1068, 1377
BssECI CCNNGG 3 cut(s) 48, 385, 892
BssMI GATC 3 cut(s) 3, 469, 1390
BssNI GRCGYC 2 cut(s) 287, 352
BssT1I CCWWGG 3 cut(s) 48, 385, 892
Bst2UI CCWGG 1 cut(s) 732
Bst4CI ACNGT 6 cut(s) 58, 728, 744, 751, 930, 973
Bst6I CTCTTC 3 cut(s) 99, 948, 1170
BstACI GRCGYC 2 cut(s) 287, 352
BstAFI CTTAAG 1 cut(s) 1174
BstC8I GCNNGC 1 cut(s) 911
BstDEI CTNAG 6 cut(s) 135, 264, 779, 917, 1023, 1289
BstDSI CCRYGG 1 cut(s) 892
BstF5I GGATG 4 cut(s) 115, 168, 328, 1279
BstKTI GATC 3 cut(s) 6, 472, 1393
BstMAI GTCTC 5 cut(s) 225, 260, 552, 1167, 1204
BstMBI GATC 3 cut(s) 3, 469, 1390
BstMWI GCNNNNNNNGC 2 cut(s) 846, 1331
BstNI CCWGG 1 cut(s) 732
BstNSI RCATGY 3 cut(s) 686, 1329, 1343
BstPAI GACNNNNGTC 1 cut(s) 576
BstSCI CCNGG 1 cut(s) 730
BstSFI CTRYAG 1 cut(s) 171
BstV1I GCAGC 4 cut(s) 254, 790, 1252, 1343
BstV2I GAAGAC 1 cut(s) 131
Bsu36I CCTNAGG 1 cut(s) 1289
BsuI GTATCC 2 cut(s) 383, 955
BsuRI GGCC 4 cut(s) 72, 695, 1083, 1320
BtgI CCRYGG 1 cut(s) 892
BtgZI GCGATG 1 cut(s) 283
BtsCI GGATG 4 cut(s) 115, 168, 328, 1279
BtsIMutI CAGTG 5 cut(s) 756, 925, 936, 1061, 1370
Cac8I GCNNGC 1 cut(s) 911
CciI TCATGA 1 cut(s) 1185
Cfr13I GGNCC 4 cut(s) 70, 431, 620, 1082
CseI GACGC 2 cut(s) 276, 360
Csp6I GTAC 6 cut(s) 712, 814, 905, 926, 969, 1348
CspCI CAANNNNNGTGG 2 cut(s) 472, 507
CviQI GTAC 6 cut(s) 712, 814, 905, 926, 969, 1348
DdeI CTNAG 6 cut(s) 135, 264, 779, 917, 1023, 1289
DpnI GATC 3 cut(s) 5, 471, 1392
DpnII GATC 3 cut(s) 3, 469, 1390
EaeI YGGCCR 2 cut(s) 693, 1318
Eam1104I CTCTTC 3 cut(s) 99, 948, 1170
EarI CTCTTC 3 cut(s) 99, 948, 1170
Eco130I CCWWGG 3 cut(s) 48, 385, 892
Eco31I GGTCTC 1 cut(s) 1167
Eco32I GATATC 2 cut(s) 168, 1048
Eco47I GGWCC 2 cut(s) 431, 620
Eco57I CTGAAG 2 cut(s) 960, 1073
Eco81I CCTNAGG 1 cut(s) 1289
EcoO109I RGGNCCY 1 cut(s) 620
EcoRII CCWGG 1 cut(s) 730
EcoRV GATATC 2 cut(s) 168, 1048
EcoT14I CCWWGG 3 cut(s) 48, 385, 892
EcoT22I ATGCAT 1 cut(s) 1102
ErhI CCWWGG 3 cut(s) 48, 385, 892
Esp3I CGTCTC 1 cut(s) 552
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 290
Fnu4HI GCNGC 4 cut(s) 243, 804, 1266, 1332
FokI GGATG 4 cut(s) 122, 175, 335, 1266
Fsp4HI GCNGC 4 cut(s) 243, 804, 1266, 1332
FspBI CTAG 3 cut(s) 252, 818, 1028
GluI GCNGC 4 cut(s) 243, 804, 1266, 1332
GsuI CTGGAG 2 cut(s) 692, 1394
HaeIII GGCC 4 cut(s) 72, 695, 1083, 1320
HgaI GACGC 2 cut(s) 276, 360
Hin1I GRCGYC 2 cut(s) 287, 352
HincII GTYRAC 1 cut(s) 747
HindII GTYRAC 1 cut(s) 747
HinfI GANTC 9 cut(s) 13, 311, 406, 447, 502, 856, 977, 1033, 1093
HpaI GTTAAC 1 cut(s) 747
HphI GGTGA 3 cut(s) 415, 472, 1042
Hpy166II GTNNAC 2 cut(s) 291, 747
Hpy188I TCNGA 3 cut(s) 8, 855, 1092
Hpy188III TCNNGA 5 cut(s) 467, 611, 737, 860, 1186
Hpy8I GTNNAC 2 cut(s) 291, 747
Hpy99I CGWCG 3 cut(s) 398, 477, 1073
HpyAV CCTTC 3 cut(s) 114, 422, 1183
HpyCH4III ACNGT 6 cut(s) 58, 728, 744, 751, 930, 973
HpyCH4IV ACGT 1 cut(s) 393
HpyF10VI GCNNNNNNNGC 2 cut(s) 846, 1331
HpyF3I CTNAG 6 cut(s) 135, 264, 779, 917, 1023, 1289
HpySE526I ACGT 1 cut(s) 393
Hsp92I GRCGYC 2 cut(s) 287, 352
KpnI GGTACC 1 cut(s) 972
Ksp22I TGATCA 1 cut(s) 3
KspAI GTTAAC 1 cut(s) 747
Kzo9I GATC 3 cut(s) 3, 469, 1390
Lsp1109I GCAGC 4 cut(s) 254, 790, 1252, 1343
LweI GCATC 1 cut(s) 100
MaeI CTAG 3 cut(s) 252, 818, 1028
MaeII ACGT 1 cut(s) 393
MaeIII GTNAC 5 cut(s) 43, 185, 329, 578, 1234
MalI GATC 3 cut(s) 5, 471, 1392
MboI GATC 3 cut(s) 3, 469, 1390
MboII GAAGA 8 cut(s) 116, 136, 710, 965, 1157, 1234, 1369, 1439
MfeI CAATTG 1 cut(s) 1497
MlyI GAGTC 1 cut(s) 415
MmeI TCCRAC 3 cut(s) 300, 522, 1023
Mph1103I ATGCAT 1 cut(s) 1102
MroXI GAANNNNTTC 3 cut(s) 446, 702, 849
MseI TTAA 7 cut(s) 368, 654, 672, 746, 1136, 1175, 1476
MslI CAYNNNNRTG 2 cut(s) 687, 1055
MspA1I CMGCKG 1 cut(s) 1265
MspCI CTTAAG 1 cut(s) 1174
MspR9I CCNGG 1 cut(s) 732
MunI CAATTG 1 cut(s) 1497
Mva1269I GAATGC 2 cut(s) 849, 1366
MvaI CCWGG 1 cut(s) 732
MwoI GCNNNNNNNGC 2 cut(s) 846, 1331
NcoI CCATGG 1 cut(s) 892
NdeII GATC 3 cut(s) 3, 469, 1390
NlaIV GGNNCC 1 cut(s) 970
NmuCI GTSAC 2 cut(s) 185, 578
NsiI ATGCAT 1 cut(s) 1102
NspI RCATGY 3 cut(s) 686, 1329, 1343
PagI TCATGA 1 cut(s) 1185
PciI ACATGT 2 cut(s) 682, 1339
PctI GAATGC 2 cut(s) 849, 1366
PdmI GAANNNNTTC 3 cut(s) 446, 702, 849
PfeI GAWTC 8 cut(s) 13, 311, 447, 502, 856, 977, 1033, 1093
PflFI GACNNNGTC 1 cut(s) 563
PkrI GCNGC 4 cut(s) 244, 805, 1267, 1333
PleI GAGTC 1 cut(s) 414
PpsI GAGTC 1 cut(s) 414
PpuMI RGGWCCY 1 cut(s) 620
PscI ACATGT 2 cut(s) 682, 1339
PshAI GACNNNNGTC 1 cut(s) 576
PshBI ATTAAT 1 cut(s) 1136
Psp5II RGGWCCY 1 cut(s) 620
Psp6I CCWGG 1 cut(s) 730
PspGI CCWGG 1 cut(s) 730
PspN4I GGNNCC 1 cut(s) 970
PspPI GGNCC 4 cut(s) 70, 431, 620, 1082
PspPPI RGGWCCY 1 cut(s) 620
PsyI GACNNNGTC 1 cut(s) 563
PvuII CAGCTG 1 cut(s) 1265
RsaI GTAC 6 cut(s) 713, 815, 906, 927, 970, 1349
RsaNI GTAC 6 cut(s) 712, 814, 905, 926, 969, 1348
RseI CAYNNNNRTG 2 cut(s) 687, 1055
SaqAI TTAA 7 cut(s) 368, 654, 672, 746, 1136, 1175, 1476
SatI GCNGC 4 cut(s) 243, 804, 1266, 1332
Sau3AI GATC 3 cut(s) 3, 469, 1390
Sau96I GGNCC 4 cut(s) 70, 431, 620, 1082
ScaI AGTACT 1 cut(s) 713
SchI GAGTC 1 cut(s) 415
ScrFI CCNGG 1 cut(s) 732
SfaNI GCATC 1 cut(s) 100
SfcI CTRYAG 1 cut(s) 171
SinI GGWCC 2 cut(s) 431, 620
SmiMI CAYNNNNRTG 2 cut(s) 687, 1055
SmlI CTYRAG 4 cut(s) 233, 536, 1121, 1174
SmoI CTYRAG 4 cut(s) 233, 536, 1121, 1174
SpeI ACTAGT 1 cut(s) 251
SspI AATATT 1 cut(s) 643
SspMI CTAG 3 cut(s) 252, 818, 1028
StyD4I CCNGG 1 cut(s) 730
StyI CCWWGG 3 cut(s) 48, 385, 892
TaaI ACNGT 6 cut(s) 58, 728, 744, 751, 930, 973
TaiI ACGT 1 cut(s) 396
TaqI TCGA 2 cut(s) 396, 980
TaqII GACCGA 1 cut(s) 192
TatI WGTACW 1 cut(s) 711
TfiI GAWTC 8 cut(s) 13, 311, 447, 502, 856, 977, 1033, 1093
Tru1I TTAA 7 cut(s) 368, 654, 672, 746, 1136, 1175, 1476
Tru9I TTAA 7 cut(s) 368, 654, 672, 746, 1136, 1175, 1476
TscAI CASTG 5 cut(s) 756, 925, 943, 1068, 1377
TseFI GTSAC 2 cut(s) 185, 578
TseI GCWGC 4 cut(s) 242, 803, 1265, 1331
Tsp45I GTSAC 2 cut(s) 185, 578
TspRI CASTG 5 cut(s) 756, 925, 943, 1068, 1377
Tth111I GACNNNGTC 1 cut(s) 563
Vha464I CTTAAG 1 cut(s) 1174
VpaK11BI GGWCC 2 cut(s) 431, 620
VspI ATTAAT 1 cut(s) 1136
XapI RAATTY 5 cut(s) 201, 702, 766, 1229, 1502
XceI RCATGY 3 cut(s) 686, 1329, 1343
XmiI GTMKAC 1 cut(s) 290
XmnI GAANNNNTTC 3 cut(s) 446, 702, 849
XspI CTAG 3 cut(s) 252, 818, 1028
ZrmI AGTACT 1 cut(s) 713
Zsp2I ATGCAT 1 cut(s) 1102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.