Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0011221

Physical Location & Seq

Genomic Coordinates Reverse (-)

1234866 .. 1240396

Gene Structure 5531 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1015800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3006 bp

ATGAAGAAAATGGGGAAATCCACCTCTTGCTTCCAAATTATCGCCTGCGGTAAGGATTCAGCGGACAACGATGATCTCGAAGCTCCCGAGAGCAAGAGTCCGAGTGACAAGCGCGGATGGAGTTTCCGAAAGAGAGCTGCACGGCATCGAGTGTTGAGCAACACTGTCATCACAGAGACGCCCACTTCCGGACATAAGGAGAGCCCGGAATCAGCGAGCGCTACTGTTCCAGAAAAGATATCGTTAATACATTGCAGTGATGAGAAACCCCAGTTGGTAACTCCTGAGAACCCAAAAGTATCTGAGACTGAACAGAAGGTATCCCAGACTGAACCAAAAGTACTTGAGACTGAACCGAACGTACCTGAAGCTGAACAGAAAGCACCGGAGACTGAACCGAACGTACCAGAAGCTGAAGGGAAAGCACCGGAGAATGAACCGAAATTACCGGAGATTGAACTGAACGTACCTAAAGCTGAACAGAAAGCACCGGAGACTGAACTGAACGTAGCAGAAGCTGAAGGGAAGGCACCGGAGACTGAACCTTACATAGCTGAAGCTGAAGGGAAAGCACCGGAGACTGAACCGAAAGTACCCGAGACTGAACCGAACGTACCCGAGACTGAACCTAAAGAACCCGAGACTGAACCCAAAGTATCCAATACTGAAAATGTCACAGAAGATGAAAGTGCAGTCAAATGCAAATCGGATGAGTATGATGTTATTGTTGTGCAGACAGCTTCCAGAGGATTGGATCAGAAATCGTTCATGGAGCTTGAGAATGTTGTTAAGTTGCAAGCTGCTGTTCGTGGGCATTTGGTCCGTAGGCATGCCGTGGGAACTTTACGATGTGTTCAAGCTCTTGTGAAAATGCAAGCTCTTGTTCGTGCTCGCCGTGCTTGTCAGGAGAAGGCCAAATCGAATATAACATACACTTCAATTGACAAGCTACTTAGCAATAGTTTTGCCCGCCGGTTGTTGGAATCATCACCGAAGACCAAACCTATGCATGCCAAGTGTGATTCCTCTAATCCCGGCTCTTTTTGGGAATGGATGGAGAGATGGACGTCACTATCATCGCCGTCAACGGAGGATATTGCAGAGTCAGAAAAAGCAGTGGCAGCAATAAAGAAACAGGAAAGAAGAATGGAAGAAATTTCTGAATCCCCTTGGGAATCTAAAATTCAAGATGAAGTTCTTTGTGAGATATCAGACTCAAAGTCCAACATCACGGAATCAATAGTGCCATCTGAAAGTGAAGAGAATCCGATTACTTATGACGCTGACAACTTGAACTTTCAGGCAAGCCATTCTGATATTGAACAGCCTCAGTTGGAAAACAACAGTACATCTGATGTGAAAGAGATTACGGAAGAGATCAATTATCTTCCAAATCAAAGTGTGCAATCAAATGCATATTCTCAGGTGGAGCTCAAGTCCTTTTCTGGGAACCCTGTCATGGAAAGAAGAAAGGAAGAAATTTCTGAGTCTCCTCGGGAATCTAAAATTCAAGATGAAGTTCTTTGTGAGATATCAGACTCAAAGTCCAGCATCACGGAATCAATGGTGCCATCTGAAAGTGAAGAAAATCTGATTACTTATGACGCTGACAACTTGAACTTTCAGGCAAGCCATTCTAACAGTGAACAGCCTCAGTTGGAGAACAGCAGTACTTCTGATGTGAAAGAGATCACGGAAGAGATAAATTATCTTCCAAATCAAAGTGTGCAATCAAATGCAGATTCTCAAGTGGAGCTCAAGTCCTTTTCTGGTAACCCTGTCACAGAAACTGAACAACCTAAACGTTCTATGAAAAGATTAGCCTCAGAGGAACTAGAAACTGAAGGAAAGAAATCTGTATTTGGATCGGGGAAAGTGAGTAATCCTGCATTTATTGCTGCACAGTCAAAATTTGAAGTGCTGAGTTCAACTACCAATTCAGGTAGATCAATTAGTCCATCCCATCAAGATGATGCTGCAAGTGAATTACAAAGGGACACATTCTCATCTGCAGTGGATACTGAAATCAGAAAGGAGCTCAACGTGGCAGAAAACCCAGTCACCCATGTATCAAGTGTTCAAGTTGGTGGATCTGAGTGTGGCACCGAAATGGGTGGCACTGAAATCTCCATTTCTTCCACCGTTGATTCGCCTAACAGATCTGATGTTGGAGCTACGGAACATGAGCATGGAGCCAAAGTTTCAGTGGAAGGAGACATTTGCAATCCTGACAGCACCGAAAATGTGGATGTCCAAGCCAAAGATTTCCCTACAATCCCAGTCTCCAACTTATCTGATCCAGTCTTGGATCAACCAGAAAAACATGATGTCGTTAATGGTGAGATCGAAAATTCTGTGGTTGCTGTGGACTCCCCACAAGCAGAGTCTCAGCCAGAGAGAACTGAGTCTGATCTGCAGAGAGAACAGGACCCTGAGGCAGGTATTCAAGCATATGCATCACCCCCAGAAGCTTCTCCAAGAAGCCATTTGACTGTCCCAGAATCCCAAGGAACACCGTCTAGTCTGATATCCGTGAAAGCTAAAGGGAGCAAAGCTGATACGAGTGGATCCAACCAAAAGCGTAAGTTTGCGTCAGCAGGAAAGAATTCGCCCTCTAACCCAAACCAAGATTCTGGATCAAATAAAGATCAGAAAAAGGGGAAGAGACGCAATTCATTTGGTTCAGAAAAACCCGCCGCTGATAAGATTGATCAAGAACCAAGACATAGCAGTAGTAATAGTTCCATCCCCCGTTTCATGCAAGCCACAGAATCTGCAAGAGCAAAACTTCAAACAAATACCTCTCCAAGATCGAGTCCAGATATGCAAGACAGAGACATTAACGTAAAGAAGAGACATTCCTTACCTGGTACAAACGGAAGGCAGGGGTCTCCACGCATCCAGCAGTCAACGTCTCAAGCACAGCCGGGTGCAAAGACAAATGAGAAAATGGAACAGGTGAAGAATCGAAGTAATCGAACATCTCAAAGGGAACAGTGCCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005856 GO:0005875 GO:0005886 GO:0008150 GO:0009507 GO:0009526 GO:0009536 GO:0009719 GO:0009725 GO:0009737 GO:0009941 GO:0010033 GO:0015630 GO:0016020 GO:0031967 GO:0031975 GO:0032991 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0071944 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4005 IQ

Protein Analysis

1002

Amino Acids

109.76

Weight (kDa)

4.91

Isoelectric Point (pI)

67.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19870 AT1G19870
fragaria_vesca	FvH4_2g38820 FvH4_2g38820 FvH4_2g38820
malus_domestica	MD08G1015800.v1.1 MD15G1014800.v1.1
prunus_persica	Prupe.1G369000_v2.0.a1
pyrus_communis	pycom08g01380
rosa_chinensis	RchiOBHm_Chr6g0302451
rosa_laevigata	RLG00000011170
rosa_multiflora	Rmu_sc0011021.1_g000014
rosa_roxburghii	Rroxscaffold_7G00165760
rosa_rugosa	Rorug06G0314400 Rorug06G0314400
rosa_samantha	Rh6AG427400 Rh6BG475300 Rh6CG439500 Rh6DG426500
rosa_wichuraiana	Rw6G036970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1070
Acc36I	ACCTGC	1 cut(s)	2429
AccB1I	GGYRCC	3 cut(s)	529, 1567, 2102
AccII	CGCG	1 cut(s)	114
AccIII	TCCGGA	1 cut(s)	188
AciI	CCGC	6 cut(s)	48, 62, 114, 970, 2694, 2697
AclI	AACGTT	1 cut(s)	1804
AclWI	GGATC	8 cut(s)	762, 1873, 2098, 2291, 2316, 2562, 2575, 2644
AcsI	RAATTY	7 cut(s)	1155, 1182, 1479, 1506, 1910, 2350, 2605
AcuI	CTGAAG	6 cut(s)	387, 435, 540, 576, 582, 1863
AcyI	GRCGYC	2 cut(s)	179, 1067
AfaI	GTAC	9 cut(s)	342, 363, 405, 468, 594, 615, 1348, 1672, 2872
AfeI	AGCGCT	1 cut(s)	220
AfiI	CCNNNNNNNGG	5 cut(s)	188, 979, 1446, 1459, 2438
AhdI	GACNNNNNGTC	2 cut(s)	1219, 1543
AjnI	CCWGG	1 cut(s)	2866
AjuI	GAANNNNNNNTTGG	4 cut(s)	257, 289, 2614, 2646
Alw21I	GWGCWC	4 cut(s)	892, 1434, 1758, 2040
AlwI	GGATC	8 cut(s)	762, 1873, 2098, 2291, 2316, 2562, 2575, 2644
AlwNI	CAGNNNCTG	4 cut(s)	413, 518, 1790, 2774
Ama87I	CYCGRG	5 cut(s)	86, 596, 617, 638, 1494
Aor13HI	TCCGGA	1 cut(s)	188
Aor51HI	AGCGCT	1 cut(s)	220
AoxI	GGCC	1 cut(s)	912
ApeKI	GCWGC	5 cut(s)	137, 800, 1121, 1898, 1976
ApoI	RAATTY	7 cut(s)	1155, 1182, 1479, 1506, 1910, 2350, 2605
Asp700I	GAANNNNTTC	2 cut(s)	764, 2605
AspLEI	GCGC	2 cut(s)	114, 221
AspS9I	GGNCC	2 cut(s)	820, 2428
AsuC2I	CCSGG	3 cut(s)	206, 1035, 2928
AsuHPI	GGTGA	5 cut(s)	981, 2053, 2351, 2451, 2971
AvaI	CYCGRG	5 cut(s)	86, 596, 617, 638, 1494
AvaII	GGWCC	2 cut(s)	820, 2428
AxyI	CCTNAGG	1 cut(s)	2433
BaeI	ACNNNNGTAYC	2 cut(s)	2052, 2085
BamHI	GGATCC	1 cut(s)	2567
BanI	GGYRCC	3 cut(s)	529, 1567, 2102
BanII	GRGCYC	4 cut(s)	206, 1434, 1758, 2040
BbsI	GAAGAC	1 cut(s)	1001
Bbv12I	GWGCWC	4 cut(s)	892, 1434, 1758, 2040
BbvI	GCAGC	5 cut(s)	124, 787, 1133, 1885, 1963
BccI	CCATC	8 cut(s)	111, 1048, 1056, 1255, 1579, 1966, 1971, 2753
BceAI	ACGGC	4 cut(s)	158, 818, 879, 1066
BciT130I	CCWGG	1 cut(s)	2868
BciVI	GTATCC	3 cut(s)	331, 667, 2011
BclI	TGATCA	1 cut(s)	2710
BcnI	CCSGG	3 cut(s)	206, 1035, 2928
BfaI	CTAG	2 cut(s)	1835, 2520
BfmI	CTRYAG	2 cut(s)	2010, 2414
BfoI	RGCGCY	1 cut(s)	222
BfuAI	ACCTGC	1 cut(s)	2429
BfuI	GTATCC	3 cut(s)	331, 667, 2011
BglII	AGATCT	1 cut(s)	2159
BisI	GCNGC	6 cut(s)	138, 801, 1122, 1899, 1977, 2697
BlsI	GCNGC	6 cut(s)	139, 802, 1123, 1900, 1978, 2698
BmcAI	AGTACT	2 cut(s)	342, 1672
Bme1390I	CCNGG	4 cut(s)	206, 1035, 2868, 2928
Bme18I	GGWCC	2 cut(s)	820, 2428
BmeRI	GACNNNNNGTC	2 cut(s)	1219, 1543
BmeT110I	CYCGRG	5 cut(s)	86, 596, 617, 638, 1494
BmgT120I	GGNCC	2 cut(s)	820, 2428
BmiI	GGNNCC	7 cut(s)	531, 1451, 1569, 2104, 2194, 2430, 2569
BmrFI	CCNGG	4 cut(s)	206, 1035, 2868, 2928
BmrI	ACTGGG	3 cut(s)	265, 2051, 2273
BmsI	GCATC	5 cut(s)	154, 1560, 1963, 2465, 2907
BmuI	ACTGGG	3 cut(s)	265, 2051, 2273
BpiI	GAAGAC	1 cut(s)	1001
BpuEI	CTTGAG	6 cut(s)	365, 797, 1418, 1731, 1742, 2901
BpuMI	CCSGG	3 cut(s)	206, 1035, 2928
BsaHI	GRCGYC	2 cut(s)	179, 1067
BsaI	GGTCTC	1 cut(s)	2895
BsaJI	CCNNGG	4 cut(s)	834, 1169, 1493, 2506
BsaWI	WCCGGW	7 cut(s)	188, 385, 427, 448, 490, 532, 574
BsaXI	ACNNNNNCTCC	6 cut(s)	1421, 1451, 1745, 1775, 2184, 2214
Bsc4I	CCNNNNNNNGG	5 cut(s)	188, 979, 1446, 1459, 2438
Bse118I	RCCGGY	1 cut(s)	972
Bse1I	ACTGG	4 cut(s)	271, 2057, 2279, 2300
Bse21I	CCTNAGG	1 cut(s)	2433
Bse3DI	GCAATG	1 cut(s)	250
BseAI	TCCGGA	1 cut(s)	188
BseBI	CCWGG	1 cut(s)	2868
BseDI	CCNNGG	4 cut(s)	834, 1169, 1493, 2506
BseGI	GGATG	7 cut(s)	122, 715, 1059, 1958, 2254, 2745, 2898
BseLI	CCNNNNNNNGG	5 cut(s)	188, 979, 1446, 1459, 2438
BseMI	GCAATG	1 cut(s)	250
BseNI	ACTGG	4 cut(s)	271, 2057, 2279, 2300
BseRI	GAGGAG	1 cut(s)	1482
BseXI	GCAGC	5 cut(s)	124, 787, 1133, 1885, 1963
BsgI	GTGCAG	4 cut(s)	123, 711, 752, 1884
Bsh1236I	CGCG	1 cut(s)	114
BshFI	GGCC	1 cut(s)	914
BshNI	GGYRCC	3 cut(s)	529, 1567, 2102
BsiHKAI	GWGCWC	4 cut(s)	892, 1434, 1758, 2040
BsiHKCI	CYCGRG	5 cut(s)	86, 596, 617, 638, 1494
BslFI	GGGAC	2 cut(s)	2009, 2480
BslI	CCNNNNNNNGG	5 cut(s)	188, 979, 1446, 1459, 2438
BsmBI	CGTCTC	3 cut(s)	170, 2659, 2919
BsmFI	GGGAC	2 cut(s)	2009, 2480
BsnI	GGCC	1 cut(s)	914
Bso31I	GGTCTC	1 cut(s)	2895
BsoBI	CYCGRG	5 cut(s)	86, 596, 617, 638, 1494
Bsp1286I	GDGCHC	5 cut(s)	206, 892, 1434, 1758, 2040
Bsp13I	TCCGGA	1 cut(s)	188
BspACI	CCGC	6 cut(s)	48, 62, 114, 970, 2694, 2697
BspANI	GGCC	1 cut(s)	914
BspEI	TCCGGA	1 cut(s)	188
BspFNI	CGCG	1 cut(s)	114
BspLI	GGNNCC	7 cut(s)	531, 1451, 1569, 2104, 2194, 2430, 2569
BspMAI	CTGCAG	2 cut(s)	2014, 2418
BspMI	ACCTGC	1 cut(s)	2429
BspPI	GGATC	8 cut(s)	762, 1873, 2098, 2291, 2316, 2562, 2575, 2644
BspT107I	GGYRCC	3 cut(s)	529, 1567, 2102
BspTNI	GGTCTC	1 cut(s)	2895
BsrDI	GCAATG	1 cut(s)	250
BsrFI	RCCGGY	1 cut(s)	972
BsrI	ACTGG	4 cut(s)	271, 2057, 2279, 2300
BssAI	RCCGGY	1 cut(s)	972
BssECI	CCNNGG	4 cut(s)	834, 1169, 1493, 2506
BssNI	GRCGYC	2 cut(s)	179, 1067
BssT1I	CCWWGG	2 cut(s)	1169, 2506
Bst2UI	CCWGG	1 cut(s)	2868
Bst4CI	ACNGT	9 cut(s)	166, 226, 1346, 1643, 1905, 2143, 2494, 2517, 2997
Bst6I	CTCTTC	5 cut(s)	1254, 1368, 1692, 2657, 2846
BstACI	GRCGYC	2 cut(s)	179, 1067
BstAPI	GCANNNNNTGC	1 cut(s)	1895
BstDSI	CCRYGG	1 cut(s)	834
BstEII	GGTNACC	1 cut(s)	1772
BstENI	CCTNNNNNAGG	1 cut(s)	2436
BstF5I	GGATG	7 cut(s)	122, 715, 1059, 1958, 2254, 2745, 2898
BstFNI	CGCG	1 cut(s)	114
BstH2I	RGCGCY	1 cut(s)	222
BstHHI	GCGC	2 cut(s)	114, 221
BstMWI	GCNNNNNNNGC	3 cut(s)	896, 1121, 1895
BstNI	CCWGG	1 cut(s)	2868
BstNSI	RCATGY	2 cut(s)	833, 1013
BstPI	GGTNACC	1 cut(s)	1772
BstSCI	CCNGG	4 cut(s)	204, 1033, 2866, 2926
BstSFI	CTRYAG	2 cut(s)	2010, 2414
BstUI	CGCG	1 cut(s)	114
BstV1I	GCAGC	5 cut(s)	124, 787, 1133, 1885, 1963
BstV2I	GAAGAC	1 cut(s)	1001
BstX2I	RGATCY	3 cut(s)	2090, 2159, 2567
BstXI	CCANNNNNNTGG	2 cut(s)	751, 2633
BstYI	RGATCY	3 cut(s)	2090, 2159, 2567
Bsu36I	CCTNAGG	1 cut(s)	2433
BsuI	GTATCC	3 cut(s)	331, 667, 2011
BsuRI	GGCC	1 cut(s)	914
BtgI	CCRYGG	1 cut(s)	834
BtgZI	GCGATG	1 cut(s)	1062
BtsCI	GGATG	7 cut(s)	122, 715, 1059, 1958, 2254, 2745, 2898
BtsI	GCAGTG	3 cut(s)	262, 1122, 2019
BtsIMutI	CAGTG	8 cut(s)	162, 262, 1122, 1648, 2019, 2118, 2211, 3002
BveI	ACCTGC	1 cut(s)	2429
CaiI	CAGNNNCTG	4 cut(s)	413, 518, 1790, 2774
CfoI	GCGC	2 cut(s)	114, 221
Cfr10I	RCCGGY	1 cut(s)	972
Cfr13I	GGNCC	2 cut(s)	820, 2428
CseI	GACGC	5 cut(s)	187, 1289, 1613, 2580, 2676
CsiI	ACCWGGT	1 cut(s)	2866
Csp6I	GTAC	9 cut(s)	341, 362, 404, 467, 593, 614, 1347, 1671, 2871
CviAII	CATG	9 cut(s)	769, 830, 1010, 1459, 2066, 2183, 2189, 2324, 2758
CviQI	GTAC	9 cut(s)	341, 362, 404, 467, 593, 614, 1347, 1671, 2871
DriI	GACNNNNNGTC	2 cut(s)	1219, 1543
Eam1104I	CTCTTC	5 cut(s)	1254, 1368, 1692, 2657, 2846
Eam1105I	GACNNNNNGTC	2 cut(s)	1219, 1543
EarI	CTCTTC	5 cut(s)	1254, 1368, 1692, 2657, 2846
Ecl136II	GAGCTC	3 cut(s)	1432, 1756, 2038
Eco130I	CCWWGG	2 cut(s)	1169, 2506
Eco24I	GRGCYC	4 cut(s)	206, 1434, 1758, 2040
Eco31I	GGTCTC	1 cut(s)	2895
Eco32I	GATATC	4 cut(s)	240, 1209, 1533, 2529
Eco47I	GGWCC	2 cut(s)	820, 2428
Eco47III	AGCGCT	1 cut(s)	220
Eco53kI	GAGCTC	3 cut(s)	1432, 1756, 2038
Eco57I	CTGAAG	6 cut(s)	387, 435, 540, 576, 582, 1863
Eco81I	CCTNAGG	1 cut(s)	2433
Eco88I	CYCGRG	5 cut(s)	86, 596, 617, 638, 1494
Eco91I	GGTNACC	1 cut(s)	1772
EcoICRI	GAGCTC	3 cut(s)	1432, 1756, 2038
EcoNI	CCTNNNNNAGG	1 cut(s)	2436
EcoO109I	RGGNCCY	1 cut(s)	2428
EcoO65I	GGTNACC	1 cut(s)	1772
EcoRI	GAATTC	1 cut(s)	2605
EcoRII	CCWGG	1 cut(s)	2866
EcoRV	GATATC	4 cut(s)	240, 1209, 1533, 2529
EcoT14I	CCWWGG	2 cut(s)	1169, 2506
EcoT22I	ATGCAT	3 cut(s)	1011, 1417, 2458
EcoT38I	GRGCYC	4 cut(s)	206, 1434, 1758, 2040
ErhI	CCWWGG	2 cut(s)	1169, 2506
Esp3I	CGTCTC	3 cut(s)	170, 2659, 2919
FaeI	CATG	9 cut(s)	772, 833, 1013, 1462, 2069, 2186, 2192, 2327, 2761
FaqI	GGGAC	2 cut(s)	2009, 2480
FatI	CATG	9 cut(s)	768, 829, 1009, 1458, 2065, 2182, 2188, 2323, 2757
FauI	CCCGC	2 cut(s)	977, 2701
FauNDI	CATATG	1 cut(s)	2452
FbaI	TGATCA	1 cut(s)	2710
Fnu4HI	GCNGC	6 cut(s)	138, 801, 1122, 1899, 1977, 2697
FokI	GGATG	7 cut(s)	129, 722, 1066, 1945, 2261, 2732, 2885
FriOI	GRGCYC	4 cut(s)	206, 1434, 1758, 2040
Fsp4HI	GCNGC	6 cut(s)	138, 801, 1122, 1899, 1977, 2697
FspBI	CTAG	2 cut(s)	1835, 2520
GlaI	GCGC	2 cut(s)	113, 220
GluI	GCNGC	6 cut(s)	138, 801, 1122, 1899, 1977, 2697
HaeII	RGCGCY	1 cut(s)	222
HaeIII	GGCC	1 cut(s)	914
HgaI	GACGC	5 cut(s)	187, 1289, 1613, 2580, 2676
HhaI	GCGC	2 cut(s)	114, 221
Hin1I	GRCGYC	2 cut(s)	179, 1067
Hin1II	CATG	9 cut(s)	772, 833, 1013, 1462, 2069, 2186, 2192, 2327, 2761
Hin6I	GCGC	2 cut(s)	112, 219
HinP1I	GCGC	2 cut(s)	112, 219
HincII	GTYRAC	2 cut(s)	1086, 2910
HindII	GTYRAC	2 cut(s)	1086, 2910
HindIII	AAGCTT	1 cut(s)	2469
HphI	GGTGA	5 cut(s)	981, 2053, 2351, 2451, 2971
Hpy166II	GTNNAC	4 cut(s)	1086, 1646, 2368, 2910
Hpy8I	GTNNAC	4 cut(s)	1086, 1646, 2368, 2910
HpyAV	CCTTC	9 cut(s)	310, 410, 515, 520, 557, 904, 1838, 2204, 2874
HpyCH4III	ACNGT	9 cut(s)	166, 226, 1346, 1643, 1905, 2143, 2494, 2517, 2997
HpyF10VI	GCNNNNNNNGC	3 cut(s)	896, 1121, 1895
Hsp92I	GRCGYC	2 cut(s)	179, 1067
Hsp92II	CATG	9 cut(s)	772, 833, 1013, 1462, 2069, 2186, 2192, 2327, 2761
HspAI	GCGC	2 cut(s)	112, 219
Kpn2I	TCCGGA	1 cut(s)	188
Ksp22I	TGATCA	1 cut(s)	2710
LmnI	GCTCC	8 cut(s)	88, 772, 1429, 1753, 2035, 2171, 2192, 2547
Lsp1109I	GCAGC	5 cut(s)	124, 787, 1133, 1885, 1963
LweI	GCATC	5 cut(s)	154, 1560, 1963, 2465, 2907
MabI	ACCWGGT	1 cut(s)	2866
MaeI	CTAG	2 cut(s)	1835, 2520
MaeIII	GTNAC	7 cut(s)	104, 277, 673, 1068, 1772, 1780, 2059
MfeI	CAATTG	1 cut(s)	939
MflI	RGATCY	3 cut(s)	2090, 2159, 2567
MhlI	GDGCHC	5 cut(s)	206, 892, 1434, 1758, 2040
MlyI	GAGTC	9 cut(s)	106, 1112, 1208, 1496, 1532, 2363, 2393, 2414, 2824
MmeI	TCCRAC	7 cut(s)	960, 1248, 1314, 1638, 2149, 2310, 2595
Mph1103I	ATGCAT	3 cut(s)	1011, 1417, 2458
MroI	TCCGGA	1 cut(s)	188
MroXI	GAANNNNTTC	2 cut(s)	764, 2605
MseI	TTAA	4 cut(s)	245, 789, 2334, 2841
MslI	CAYNNNNRTG	4 cut(s)	255, 1968, 2108, 2187
MspA1I	CMGCKG	2 cut(s)	62, 2699
MspR9I	CCNGG	4 cut(s)	206, 1035, 2868, 2928
MunI	CAATTG	1 cut(s)	939
MvaI	CCWGG	1 cut(s)	2868
MvnI	CGCG	1 cut(s)	114
MwoI	GCNNNNNNNGC	3 cut(s)	896, 1121, 1895
NciI	CCSGG	3 cut(s)	206, 1035, 2928
NdeI	CATATG	1 cut(s)	2452
NlaIII	CATG	9 cut(s)	772, 833, 1013, 1462, 2069, 2186, 2192, 2327, 2761
NlaIV	GGNNCC	7 cut(s)	531, 1451, 1569, 2104, 2194, 2430, 2569
NmuCI	GTSAC	5 cut(s)	104, 673, 1068, 1780, 2059
NsiI	ATGCAT	3 cut(s)	1011, 1417, 2458
NspI	RCATGY	2 cut(s)	833, 1013
PaeI	GCATGC	2 cut(s)	833, 1013
PcsI	WCGNNNNNNNCGW	4 cut(s)	75, 84, 892, 2974
PdmI	GAANNNNTTC	2 cut(s)	764, 2605
PkrI	GCNGC	6 cut(s)	139, 802, 1123, 1900, 1978, 2698
PleI	GAGTC	9 cut(s)	105, 1111, 1208, 1495, 1532, 2363, 2392, 2413, 2823
PpsI	GAGTC	9 cut(s)	105, 1111, 1208, 1495, 1532, 2363, 2392, 2413, 2823
PpuMI	RGGWCCY	1 cut(s)	2428
Psp124BI	GAGCTC	3 cut(s)	1434, 1758, 2040
Psp1406I	AACGTT	1 cut(s)	1804
Psp5II	RGGWCCY	1 cut(s)	2428
Psp6I	CCWGG	1 cut(s)	2866
PspEI	GGTNACC	1 cut(s)	1772
PspGI	CCWGG	1 cut(s)	2866
PspN4I	GGNNCC	7 cut(s)	531, 1451, 1569, 2104, 2194, 2430, 2569
PspPI	GGNCC	2 cut(s)	820, 2428
PspPPI	RGGWCCY	1 cut(s)	2428
PstI	CTGCAG	2 cut(s)	2014, 2418
PstNI	CAGNNNCTG	4 cut(s)	413, 518, 1790, 2774
PsuI	RGATCY	3 cut(s)	2090, 2159, 2567
RsaI	GTAC	9 cut(s)	342, 363, 405, 468, 594, 615, 1348, 1672, 2872
RsaNI	GTAC	9 cut(s)	341, 362, 404, 467, 593, 614, 1347, 1671, 2871
RseI	CAYNNNNRTG	4 cut(s)	255, 1968, 2108, 2187
SacI	GAGCTC	3 cut(s)	1434, 1758, 2040
SaqAI	TTAA	4 cut(s)	245, 789, 2334, 2841
SatI	GCNGC	6 cut(s)	138, 801, 1122, 1899, 1977, 2697
Sau96I	GGNCC	2 cut(s)	820, 2428
ScaI	AGTACT	2 cut(s)	342, 1672
SchI	GAGTC	9 cut(s)	106, 1112, 1208, 1496, 1532, 2363, 2393, 2414, 2824
ScrFI	CCNGG	4 cut(s)	206, 1035, 2868, 2928
SduI	GDGCHC	5 cut(s)	206, 892, 1434, 1758, 2040
SexAI	ACCWGGT	1 cut(s)	2866
SfaNI	GCATC	5 cut(s)	154, 1560, 1963, 2465, 2907
SfcI	CTRYAG	2 cut(s)	2010, 2414
SinI	GGWCC	2 cut(s)	820, 2428
SmiMI	CAYNNNNRTG	4 cut(s)	255, 1968, 2108, 2187
SmlI	CTYRAG	6 cut(s)	344, 776, 1433, 1746, 1757, 2916
SmoI	CTYRAG	6 cut(s)	344, 776, 1433, 1746, 1757, 2916
SphI	GCATGC	2 cut(s)	833, 1013
SsiI	CCGC	6 cut(s)	48, 62, 114, 970, 2694, 2697
SspMI	CTAG	2 cut(s)	1835, 2520
SstI	GAGCTC	3 cut(s)	1434, 1758, 2040
StyD4I	CCNGG	4 cut(s)	204, 1033, 2866, 2926
StyI	CCWWGG	2 cut(s)	1169, 2506
TaaI	ACNGT	9 cut(s)	166, 226, 1346, 1643, 1905, 2143, 2494, 2517, 2997
TaqI	TCGA	7 cut(s)	78, 148, 920, 2346, 2813, 2968, 2977
TatI	WGTACW	3 cut(s)	340, 1346, 1670
TauI	GCSGC	1 cut(s)	2699
Tru1I	TTAA	4 cut(s)	245, 789, 2334, 2841
Tru9I	TTAA	4 cut(s)	245, 789, 2334, 2841
TscAI	CASTG	8 cut(s)	169, 262, 1122, 1648, 2019, 2125, 2211, 3002
TseFI	GTSAC	5 cut(s)	104, 673, 1068, 1780, 2059
TseI	GCWGC	5 cut(s)	137, 800, 1121, 1898, 1976
Tsp45I	GTSAC	5 cut(s)	104, 673, 1068, 1780, 2059
TspDTI	ATGAA	9 cut(s)	17, 450, 699, 757, 1206, 1530, 1826, 2664, 2746
TspGWI	ACGGA	9 cut(s)	812, 1103, 1247, 1385, 1571, 1709, 2192, 2521, 2892
TspRI	CASTG	8 cut(s)	169, 262, 1122, 1648, 2019, 2125, 2211, 3002
VpaK11BI	GGWCC	2 cut(s)	820, 2428
XagI	CCTNNNNNAGG	1 cut(s)	2436
XapI	RAATTY	7 cut(s)	1155, 1182, 1479, 1506, 1910, 2350, 2605
XceI	RCATGY	2 cut(s)	833, 1013
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2203
XmnI	GAANNNNTTC	2 cut(s)	764, 2605
XspI	CTAG	2 cut(s)	1835, 2520
ZraI	GACGTC	1 cut(s)	1068
ZrmI	AGTACT	2 cut(s)	342, 1672
Zsp2I	ATGCAT	3 cut(s)	1011, 1417, 2458

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.