iq-domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G19870 AT1G19870 |
| fragaria_vesca | FvH4_2g38820 FvH4_2g38820 FvH4_2g38820 |
| malus_domestica | MD08G1015800.v1.1 MD15G1014800.v1.1 |
| prunus_persica | Prupe.1G369000_v2.0.a1 |
| pyrus_communis | pycom08g01380 |
| rosa_chinensis | RchiOBHm_Chr6g0302451 |
| rosa_laevigata | RLG00000011170 |
| rosa_multiflora | Rmu_sc0011021.1_g000014 |
| rosa_roxburghii | Rroxscaffold_7G00165760 |
| rosa_rugosa | Rorug06G0314400 Rorug06G0314400 |
| rosa_samantha | Rh6AG427400 Rh6BG475300 Rh6CG439500 Rh6DG426500 |
| rosa_wichuraiana | Rw6G036970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 1685 |
| AccII | CGCG | 2 cut(s) | 651, 729 |
| AciI | CCGC | 8 cut(s) | 39, 53, 174, 608, 649, 651, 1233, 1685 |
| AclI | AACGTT | 1 cut(s) | 1324 |
| AclWI | GGATC | 9 cut(s) | 595, 878, 1380, 1393, 1603, 2076, 2089, 2158, 2404 |
| AcsI | RAATTY | 4 cut(s) | 1008, 1035, 1063, 1430 |
| AcuI | CTGAAG | 3 cut(s) | 162, 728, 1469 |
| AfaI | GTAC | 3 cut(s) | 144, 1213, 1923 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 179 |
| AjnI | CCWGG | 2 cut(s) | 1388, 2374 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2128, 2160 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1587, 1619 |
| Alw26I | GTCTC | 9 cut(s) | 940, 1023, 1170, 1223, 1798, 1882, 2173, 2356, 2427 |
| AlwI | GGATC | 9 cut(s) | 595, 878, 1380, 1393, 1603, 2076, 2089, 2158, 2404 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 203, 616 |
| AoxI | GGCC | 1 cut(s) | 594 |
| ApeKI | GCWGC | 6 cut(s) | 641, 835, 1418, 1946, 2238, 2241 |
| ApoI | RAATTY | 4 cut(s) | 1008, 1035, 1063, 1430 |
| AspLEI | GCGC | 1 cut(s) | 731 |
| AspS9I | GGNCC | 4 cut(s) | 304, 595, 1629, 2415 |
| AsuC2I | CCSGG | 3 cut(s) | 832, 1718, 2442 |
| AsuHPI | GGTGA | 4 cut(s) | 216, 597, 1408, 1859 |
| AvaII | GGWCC | 3 cut(s) | 304, 1629, 2415 |
| BamHI | GGATCC | 2 cut(s) | 1385, 2081 |
| BanII | GRGCYC | 1 cut(s) | 197 |
| BauI | CACGAG | 1 cut(s) | 309 |
| BbvI | GCAGC | 6 cut(s) | 628, 847, 1405, 1958, 2250, 2253 |
| BccI | CCATC | 3 cut(s) | 922, 1045, 1358 |
| BceAI | ACGGC | 2 cut(s) | 149, 953 |
| BciT130I | CCWGG | 2 cut(s) | 1390, 2376 |
| BciVI | GTATCC | 2 cut(s) | 940, 1483 |
| BclI | TGATCA | 3 cut(s) | 370, 2209, 2218 |
| BcnI | CCSGG | 3 cut(s) | 832, 1718, 2442 |
| BcoDI | GTCTC | 9 cut(s) | 940, 1023, 1170, 1223, 1798, 1882, 2173, 2356, 2427 |
| BfaI | CTAG | 2 cut(s) | 2034, 2286 |
| BfmI | CTRYAG | 2 cut(s) | 1944, 2109 |
| BfuI | GTATCC | 2 cut(s) | 940, 1483 |
| BglII | AGATCT | 1 cut(s) | 1337 |
| BisI | GCNGC | 7 cut(s) | 40, 642, 836, 1419, 1947, 2239, 2242 |
| BlsI | GCNGC | 7 cut(s) | 41, 643, 837, 1420, 1948, 2240, 2243 |
| BmcAI | AGTACT | 1 cut(s) | 144 |
| Bme1390I | CCNGG | 5 cut(s) | 832, 1390, 1718, 2376, 2442 |
| Bme18I | GGWCC | 3 cut(s) | 304, 1629, 2415 |
| BmgT120I | GGNCC | 4 cut(s) | 304, 595, 1629, 2415 |
| BmiI | GGNNCC | 5 cut(s) | 306, 1387, 1560, 1630, 2083 |
| BmrFI | CCNGG | 5 cut(s) | 832, 1390, 1718, 2376, 2442 |
| BmrI | ACTGGG | 1 cut(s) | 1784 |
| BmsI | GCATC | 3 cut(s) | 145, 1114, 2415 |
| BmuI | ACTGGG | 1 cut(s) | 1784 |
| BoxI | GACNNNNGTC | 1 cut(s) | 578 |
| BpmI | CTGGAG | 2 cut(s) | 130, 1518 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2430 |
| BpuMI | CCSGG | 3 cut(s) | 832, 1718, 2442 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2351 |
| BsaI | GGTCTC | 2 cut(s) | 1223, 1882 |
| BsaJI | CCNNGG | 2 cut(s) | 649, 1269 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 103, 133 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 179 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2351 |
| BseBI | CCWGG | 2 cut(s) | 1390, 2376 |
| BseDI | CCNNGG | 2 cut(s) | 649, 1269 |
| BseGI | GGATG | 6 cut(s) | 373, 553, 933, 1942, 1970, 2406 |
| BseJI | GATNNNNATC | 1 cut(s) | 2351 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 179 |
| BseRI | GAGGAG | 1 cut(s) | 2391 |
| BseXI | GCAGC | 6 cut(s) | 628, 847, 1405, 1958, 2250, 2253 |
| BsgI | GTGCAG | 1 cut(s) | 114 |
| Bsh1236I | CGCG | 2 cut(s) | 651, 729 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1473 |
| BshFI | GGCC | 1 cut(s) | 596 |
| BsiEI | CGRYCG | 1 cut(s) | 1473 |
| BsiSI | CCGG | 3 cut(s) | 832, 1718, 2441 |
| BslFI | GGGAC | 6 cut(s) | 1529, 1571, 1642, 1700, 1991, 2038 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 179 |
| BsmAI | GTCTC | 9 cut(s) | 940, 1023, 1170, 1223, 1798, 1882, 2173, 2356, 2427 |
| BsmBI | CGTCTC | 1 cut(s) | 2173 |
| BsmFI | GGGAC | 6 cut(s) | 1529, 1571, 1642, 1700, 1991, 2038 |
| BsnI | GGCC | 1 cut(s) | 596 |
| Bso31I | GGTCTC | 2 cut(s) | 1223, 1882 |
| Bsp1286I | GDGCHC | 1 cut(s) | 197 |
| Bsp19I | CCATGG | 1 cut(s) | 1269 |
| BspACI | CCGC | 8 cut(s) | 39, 53, 174, 608, 649, 651, 1233, 1685 |
| BspANI | GGCC | 1 cut(s) | 596 |
| BspFNI | CGCG | 2 cut(s) | 651, 729 |
| BspHI | TCATGA | 2 cut(s) | 298, 2140 |
| BspLI | GGNNCC | 5 cut(s) | 306, 1387, 1560, 1630, 2083 |
| BspMAI | CTGCAG | 2 cut(s) | 1948, 2113 |
| BspPI | GGATC | 9 cut(s) | 595, 878, 1380, 1393, 1603, 2076, 2089, 2158, 2404 |
| BspQI | GCTCTTC | 2 cut(s) | 185, 1182 |
| BspTNI | GGTCTC | 2 cut(s) | 1223, 1882 |
| BsrBI | CCGCTC | 1 cut(s) | 1685 |
| BssECI | CCNNGG | 2 cut(s) | 649, 1269 |
| BssSI | CACGAG | 1 cut(s) | 309 |
| BssT1I | CCWWGG | 1 cut(s) | 1269 |
| Bst2BI | CACGAG | 1 cut(s) | 309 |
| Bst2UI | CCWGG | 2 cut(s) | 1390, 2376 |
| Bst4CI | ACNGT | 6 cut(s) | 241, 758, 1171, 2005, 2106, 2415 |
| Bst6I | CTCTTC | 9 cut(s) | 185, 747, 993, 1182, 1488, 1531, 1651, 2171, 2354 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 661, 1415 |
| BstC8I | GCNNGC | 6 cut(s) | 639, 653, 672, 717, 1150, 1959 |
| BstDSI | CCRYGG | 2 cut(s) | 649, 1269 |
| BstF5I | GGATG | 6 cut(s) | 373, 553, 933, 1942, 1970, 2406 |
| BstFNI | CGCG | 2 cut(s) | 651, 729 |
| BstHHI | GCGC | 1 cut(s) | 731 |
| BstMAI | GTCTC | 9 cut(s) | 940, 1023, 1170, 1223, 1798, 1882, 2173, 2356, 2427 |
| BstMCI | CGRYCG | 1 cut(s) | 1473 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 212, 563, 661, 1289, 1415 |
| BstNI | CCWGG | 2 cut(s) | 1390, 2376 |
| BstNSI | RCATGY | 2 cut(s) | 39, 674 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 578 |
| BstSCI | CCNGG | 5 cut(s) | 830, 1388, 1716, 2374, 2440 |
| BstSFI | CTRYAG | 2 cut(s) | 1944, 2109 |
| BstUI | CGCG | 2 cut(s) | 651, 729 |
| BstV1I | GCAGC | 6 cut(s) | 628, 847, 1405, 1958, 2250, 2253 |
| BstX2I | RGATCY | 4 cut(s) | 1337, 1385, 2081, 2396 |
| BstYI | RGATCY | 4 cut(s) | 1337, 1385, 2081, 2396 |
| BsuI | GTATCC | 2 cut(s) | 940, 1483 |
| BsuRI | GGCC | 1 cut(s) | 596 |
| BtgI | CCRYGG | 2 cut(s) | 649, 1269 |
| BtsCI | GGATG | 6 cut(s) | 373, 553, 933, 1942, 1970, 2406 |
| BtsI | GCAGTG | 2 cut(s) | 153, 1941 |
| BtsIMutI | CAGTG | 5 cut(s) | 153, 162, 1941, 2052, 2102 |
| Cac8I | GCNNGC | 6 cut(s) | 639, 653, 672, 717, 1150, 1959 |
| CaiI | CAGNNNCTG | 2 cut(s) | 203, 616 |
| CciI | TCATGA | 2 cut(s) | 298, 2140 |
| CfoI | GCGC | 1 cut(s) | 731 |
| Cfr13I | GGNCC | 4 cut(s) | 304, 595, 1629, 2415 |
| Cfr42I | CCGCGG | 1 cut(s) | 652 |
| CseI | GACGC | 2 cut(s) | 1265, 2190 |
| CsiI | ACCWGGT | 1 cut(s) | 2374 |
| Csp6I | GTAC | 3 cut(s) | 143, 1212, 1922 |
| CviQI | GTAC | 3 cut(s) | 143, 1212, 1922 |
| DraI | TTTAAA | 1 cut(s) | 960 |
| Eam1104I | CTCTTC | 9 cut(s) | 185, 747, 993, 1182, 1488, 1531, 1651, 2171, 2354 |
| EarI | CTCTTC | 9 cut(s) | 185, 747, 993, 1182, 1488, 1531, 1651, 2171, 2354 |
| Eco130I | CCWWGG | 1 cut(s) | 1269 |
| Eco24I | GRGCYC | 1 cut(s) | 197 |
| Eco31I | GGTCTC | 2 cut(s) | 1223, 1882 |
| Eco32I | GATATC | 2 cut(s) | 1678, 2043 |
| Eco47I | GGWCC | 3 cut(s) | 304, 1629, 2415 |
| Eco57I | CTGAAG | 3 cut(s) | 162, 728, 1469 |
| EcoO109I | RGGNCCY | 1 cut(s) | 304 |
| EcoRII | CCWGG | 2 cut(s) | 1388, 2374 |
| EcoRV | GATATC | 2 cut(s) | 1678, 2043 |
| EcoT14I | CCWWGG | 1 cut(s) | 1269 |
| EcoT38I | GRGCYC | 1 cut(s) | 197 |
| ErhI | CCWWGG | 1 cut(s) | 1269 |
| Esp3I | CGTCTC | 1 cut(s) | 2173 |
| FaqI | GGGAC | 6 cut(s) | 1529, 1571, 1642, 1700, 1991, 2038 |
| FauI | CCCGC | 2 cut(s) | 181, 644 |
| FauNDI | CATATG | 1 cut(s) | 1963 |
| FbaI | TGATCA | 3 cut(s) | 370, 2209, 2218 |
| Fnu4HI | GCNGC | 7 cut(s) | 40, 642, 836, 1419, 1947, 2239, 2242 |
| FokI | GGATG | 6 cut(s) | 380, 560, 940, 1949, 1957, 2393 |
| FriOI | GRGCYC | 1 cut(s) | 197 |
| Fsp4HI | GCNGC | 7 cut(s) | 40, 642, 836, 1419, 1947, 2239, 2242 |
| FspBI | CTAG | 2 cut(s) | 2034, 2286 |
| GlaI | GCGC | 1 cut(s) | 730 |
| GluI | GCNGC | 7 cut(s) | 40, 642, 836, 1419, 1947, 2239, 2242 |
| GsuI | CTGGAG | 2 cut(s) | 130, 1518 |
| HaeIII | GGCC | 1 cut(s) | 596 |
| HapII | CCGG | 3 cut(s) | 832, 1718, 2441 |
| HgaI | GACGC | 2 cut(s) | 1265, 2190 |
| HhaI | GCGC | 1 cut(s) | 731 |
| Hin6I | GCGC | 1 cut(s) | 729 |
| HinP1I | GCGC | 1 cut(s) | 729 |
| HindIII | AAGCTT | 2 cut(s) | 1281, 2294 |
| HpaII | CCGG | 3 cut(s) | 832, 1718, 2441 |
| HphI | GGTGA | 4 cut(s) | 216, 597, 1408, 1859 |
| Hpy99I | CGWCG | 1 cut(s) | 1471 |
| HpyAV | CCTTC | 8 cut(s) | 422, 742, 772, 897, 1387, 2040, 2136, 2382 |
| HpyCH4III | ACNGT | 6 cut(s) | 241, 758, 1171, 2005, 2106, 2415 |
| HpyCH4IV | ACGT | 4 cut(s) | 1214, 1324, 1920, 2095 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 212, 563, 661, 1289, 1415 |
| HpySE526I | ACGT | 4 cut(s) | 1214, 1324, 1920, 2095 |
| HspAI | GCGC | 1 cut(s) | 729 |
| Ksp22I | TGATCA | 3 cut(s) | 370, 2209, 2218 |
| KspI | CCGCGG | 1 cut(s) | 652 |
| LguI | GCTCTTC | 2 cut(s) | 185, 1182 |
| LmnI | GCTCC | 5 cut(s) | 613, 1558, 1682, 1687, 2061 |
| Lsp1109I | GCAGC | 6 cut(s) | 628, 847, 1405, 1958, 2250, 2253 |
| LweI | GCATC | 3 cut(s) | 145, 1114, 2415 |
| MabI | ACCWGGT | 1 cut(s) | 2374 |
| MaeI | CTAG | 2 cut(s) | 2034, 2286 |
| MaeII | ACGT | 4 cut(s) | 1214, 1324, 1920, 2095 |
| MaeIII | GTNAC | 7 cut(s) | 95, 787, 970, 1396, 1805, 2100, 2272 |
| MbiI | CCGCTC | 1 cut(s) | 1685 |
| MflI | RGATCY | 4 cut(s) | 1337, 1385, 2081, 2396 |
| MhlI | GDGCHC | 1 cut(s) | 197 |
| MluCI | AATT | 6 cut(s) | 1008, 1035, 1063, 1430, 2185, 2248 |
| MlyI | GAGTC | 5 cut(s) | 560, 1025, 1901, 2288, 2332 |
| MmeI | TCCRAC | 4 cut(s) | 658, 1179, 1821, 2434 |
| MseI | TTAA | 3 cut(s) | 630, 876, 959 |
| MslI | CAYNNNNRTG | 5 cut(s) | 960, 1044, 1695, 1701, 2169 |
| MspA1I | CMGCKG | 2 cut(s) | 53, 651 |
| MspI | CCGG | 3 cut(s) | 832, 1718, 2441 |
| MspR9I | CCNGG | 5 cut(s) | 832, 1390, 1718, 2376, 2442 |
| MvaI | CCWGG | 2 cut(s) | 1390, 2376 |
| MvnI | CGCG | 2 cut(s) | 651, 729 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 212, 563, 661, 1289, 1415 |
| NciI | CCSGG | 3 cut(s) | 832, 1718, 2442 |
| NcoI | CCATGG | 1 cut(s) | 1269 |
| NdeI | CATATG | 1 cut(s) | 1963 |
| NlaIV | GGNNCC | 5 cut(s) | 306, 1387, 1560, 1630, 2083 |
| NmuCI | GTSAC | 5 cut(s) | 95, 970, 1396, 2100, 2272 |
| NspI | RCATGY | 2 cut(s) | 39, 674 |
| PaeI | GCATGC | 1 cut(s) | 674 |
| PagI | TCATGA | 2 cut(s) | 298, 2140 |
| PciSI | GCTCTTC | 2 cut(s) | 185, 1182 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 75 |
| PfoI | TCCNGGA | 2 cut(s) | 1388, 1716 |
| PkrI | GCNGC | 7 cut(s) | 41, 643, 837, 1420, 1948, 2240, 2243 |
| Ple19I | CGATCG | 1 cut(s) | 1473 |
| PleI | GAGTC | 5 cut(s) | 559, 1024, 1900, 2287, 2331 |
| PpsI | GAGTC | 5 cut(s) | 559, 1024, 1900, 2287, 2331 |
| PpuMI | RGGWCCY | 1 cut(s) | 304 |
| PshAI | GACNNNNGTC | 1 cut(s) | 578 |
| Psp1406I | AACGTT | 1 cut(s) | 1324 |
| Psp5II | RGGWCCY | 1 cut(s) | 304 |
| Psp6I | CCWGG | 2 cut(s) | 1388, 2374 |
| PspGI | CCWGG | 2 cut(s) | 1388, 2374 |
| PspN4I | GGNNCC | 5 cut(s) | 306, 1387, 1560, 1630, 2083 |
| PspPI | GGNCC | 4 cut(s) | 304, 595, 1629, 2415 |
| PspPPI | RGGWCCY | 1 cut(s) | 304 |
| PstI | CTGCAG | 2 cut(s) | 1948, 2113 |
| PstNI | CAGNNNCTG | 2 cut(s) | 203, 616 |
| PsuI | RGATCY | 4 cut(s) | 1337, 1385, 2081, 2396 |
| PvuI | CGATCG | 1 cut(s) | 1473 |
| RsaI | GTAC | 3 cut(s) | 144, 1213, 1923 |
| RsaNI | GTAC | 3 cut(s) | 143, 1212, 1922 |
| RseI | CAYNNNNRTG | 5 cut(s) | 960, 1044, 1695, 1701, 2169 |
| SacII | CCGCGG | 1 cut(s) | 652 |
| SapI | GCTCTTC | 2 cut(s) | 185, 1182 |
| SaqAI | TTAA | 3 cut(s) | 630, 876, 959 |
| SatI | GCNGC | 7 cut(s) | 40, 642, 836, 1419, 1947, 2239, 2242 |
| Sau96I | GGNCC | 4 cut(s) | 304, 595, 1629, 2415 |
| ScaI | AGTACT | 1 cut(s) | 144 |
| SchI | GAGTC | 5 cut(s) | 560, 1025, 1901, 2288, 2332 |
| ScrFI | CCNGG | 5 cut(s) | 832, 1390, 1718, 2376, 2442 |
| SduI | GDGCHC | 1 cut(s) | 197 |
| SexAI | ACCWGGT | 1 cut(s) | 2374 |
| SfaNI | GCATC | 3 cut(s) | 145, 1114, 2415 |
| SfcI | CTRYAG | 2 cut(s) | 1944, 2109 |
| Sfr303I | CCGCGG | 1 cut(s) | 652 |
| SgrBI | CCGCGG | 1 cut(s) | 652 |
| SinI | GGWCC | 3 cut(s) | 304, 1629, 2415 |
| SmiI | ATTTAAAT | 1 cut(s) | 960 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 960, 1044, 1695, 1701, 2169 |
| SphI | GCATGC | 1 cut(s) | 674 |
| Sse9I | AATT | 6 cut(s) | 1008, 1035, 1063, 1430, 2185, 2248 |
| SsiI | CCGC | 8 cut(s) | 39, 53, 174, 608, 649, 651, 1233, 1685 |
| SspMI | CTAG | 2 cut(s) | 2034, 2286 |
| StyD4I | CCNGG | 5 cut(s) | 830, 1388, 1716, 2374, 2440 |
| StyI | CCWWGG | 1 cut(s) | 1269 |
| SwaI | ATTTAAAT | 1 cut(s) | 960 |
| TaaI | ACNGT | 6 cut(s) | 241, 758, 1171, 2005, 2106, 2415 |
| TaiI | ACGT | 4 cut(s) | 1217, 1327, 1923, 2098 |
| TaqI | TCGA | 8 cut(s) | 69, 139, 414, 773, 918, 1305, 1427, 2321 |
| TaqII | GACCGA | 1 cut(s) | 1646 |
| TasI | AATT | 6 cut(s) | 1008, 1035, 1063, 1430, 2185, 2248 |
| TatI | WGTACW | 1 cut(s) | 142 |
| TauI | GCSGC | 1 cut(s) | 42 |
| Tru1I | TTAA | 3 cut(s) | 630, 876, 959 |
| Tru9I | TTAA | 3 cut(s) | 630, 876, 959 |
| TscAI | CASTG | 5 cut(s) | 160, 169, 1948, 2052, 2109 |
| TseFI | GTSAC | 5 cut(s) | 95, 970, 1396, 2100, 2272 |
| TseI | GCWGC | 6 cut(s) | 641, 835, 1418, 1946, 2238, 2241 |
| Tsp45I | GTSAC | 5 cut(s) | 95, 970, 1396, 2100, 2272 |
| TspDTI | ATGAA | 9 cut(s) | 860, 978, 1028, 1200, 1346, 1467, 1871, 2178, 2254 |
| TspGWI | ACGGA | 1 cut(s) | 107 |
| TspRI | CASTG | 5 cut(s) | 160, 169, 1948, 2052, 2109 |
| VpaK11BI | GGWCC | 3 cut(s) | 304, 1629, 2415 |
| XapI | RAATTY | 4 cut(s) | 1008, 1035, 1063, 1430 |
| XceI | RCATGY | 2 cut(s) | 39, 674 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1351 |
| XspI | CTAG | 2 cut(s) | 2034, 2286 |
| ZrmI | AGTACT | 1 cut(s) | 144 |