Rare lipoprotein A (RlpA)-like double-psi beta-barrel
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G20190 AT1G20190 |
| fragaria_vesca | FvH4_2g38040 |
| malus_domestica | MD03G1275400.v1.1 MD08G1009000.v1.1 MD15G1007700.v1.1 |
| prunus_persica | Prupe.1G360700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0303551 |
| rosa_laevigata | RLG00000011074 |
| rosa_multiflora | Rmu_ssc0000114.1_g000030 |
| rosa_roxburghii | Rroxscaffold_7G00164640 |
| rosa_rugosa | Rorug06G0322200 |
| rosa_samantha | Rh6AG436700 Rh6BG466700 Rh6CG448600 Rh6DG435400 |
| rosa_wichuraiana | Rw6G037790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 533 |
| AccBSI | CCGCTC | 1 cut(s) | 38 |
| AccII | CGCG | 1 cut(s) | 257 |
| AclI | AACGTT | 1 cut(s) | 747 |
| AclWI | GGATC | 1 cut(s) | 580 |
| AcoI | YGGCCR | 1 cut(s) | 33 |
| AcsI | RAATTY | 1 cut(s) | 414 |
| AfaI | GTAC | 1 cut(s) | 170 |
| AflIII | ACRYGT | 1 cut(s) | 245 |
| AgsI | TTSAA | 3 cut(s) | 208, 280, 527 |
| AleI | CACNNNNGTG | 1 cut(s) | 271 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 417, 449 |
| AluBI | AGCT | 8 cut(s) | 17, 137, 218, 287, 459, 514, 614, 650 |
| AluI | AGCT | 8 cut(s) | 17, 137, 218, 287, 459, 514, 614, 650 |
| Alw26I | GTCTC | 3 cut(s) | 15, 495, 603 |
| AlwI | GGATC | 1 cut(s) | 580 |
| AoxI | GGCC | 2 cut(s) | 33, 65 |
| ApoI | RAATTY | 1 cut(s) | 414 |
| BccI | CCATC | 3 cut(s) | 572, 635, 671 |
| BceAI | ACGGC | 2 cut(s) | 198, 213 |
| BciVI | GTATCC | 1 cut(s) | 571 |
| BclI | TGATCA | 1 cut(s) | 250 |
| BcoDI | GTCTC | 3 cut(s) | 15, 495, 603 |
| BfaI | CTAG | 4 cut(s) | 14, 515, 638, 687 |
| BfmI | CTRYAG | 1 cut(s) | 235 |
| BfuAI | ACCTGC | 1 cut(s) | 533 |
| BfuI | GTATCC | 1 cut(s) | 571 |
| BglII | AGATCT | 1 cut(s) | 151 |
| BisI | GCNGC | 4 cut(s) | 36, 186, 258, 368 |
| BlsI | GCNGC | 4 cut(s) | 37, 187, 259, 369 |
| BmrI | ACTGGG | 1 cut(s) | 616 |
| BmsI | GCATC | 1 cut(s) | 46 |
| BmuI | ACTGGG | 1 cut(s) | 616 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 681, 713 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 276, 306, 417, 447 |
| Bse1I | ACTGG | 2 cut(s) | 586, 611 |
| BseNI | ACTGG | 2 cut(s) | 586, 611 |
| BseRI | GAGGAG | 3 cut(s) | 438, 489, 552 |
| Bsh1236I | CGCG | 1 cut(s) | 257 |
| BshFI | GGCC | 2 cut(s) | 35, 67 |
| BslFI | GGGAC | 1 cut(s) | 187 |
| BsmAI | GTCTC | 3 cut(s) | 15, 495, 603 |
| BsmFI | GGGAC | 1 cut(s) | 187 |
| BsmI | GAATGC | 2 cut(s) | 236, 634 |
| BsnI | GGCC | 2 cut(s) | 35, 67 |
| Bsp143I | GATC | 4 cut(s) | 151, 250, 408, 572 |
| BspANI | GGCC | 2 cut(s) | 35, 67 |
| BspFNI | CGCG | 1 cut(s) | 257 |
| BspMI | ACCTGC | 1 cut(s) | 533 |
| BspPI | GGATC | 1 cut(s) | 580 |
| BsrBI | CCGCTC | 1 cut(s) | 38 |
| BsrI | ACTGG | 2 cut(s) | 586, 611 |
| BssMI | GATC | 4 cut(s) | 151, 250, 408, 572 |
| Bst4CI | ACNGT | 2 cut(s) | 270, 350 |
| Bst6I | CTCTTC | 1 cut(s) | 493 |
| BstFNI | CGCG | 1 cut(s) | 257 |
| BstKTI | GATC | 4 cut(s) | 154, 253, 411, 575 |
| BstMAI | GTCTC | 3 cut(s) | 15, 495, 603 |
| BstMBI | GATC | 4 cut(s) | 151, 250, 408, 572 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 23, 32, 56, 231, 395 |
| BstSFI | CTRYAG | 1 cut(s) | 235 |
| BstUI | CGCG | 1 cut(s) | 257 |
| BstX2I | RGATCY | 1 cut(s) | 151 |
| BstYI | RGATCY | 1 cut(s) | 151 |
| BsuI | GTATCC | 1 cut(s) | 571 |
| BsuRI | GGCC | 2 cut(s) | 35, 67 |
| BveI | ACCTGC | 1 cut(s) | 533 |
| CseI | GACGC | 1 cut(s) | 122 |
| Csp6I | GTAC | 1 cut(s) | 169 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 331, 366 |
| CviAII | CATG | 2 cut(s) | 385, 595 |
| CviQI | GTAC | 1 cut(s) | 169 |
| DpnI | GATC | 4 cut(s) | 153, 252, 410, 574 |
| DpnII | GATC | 4 cut(s) | 151, 250, 408, 572 |
| EaeI | YGGCCR | 1 cut(s) | 33 |
| Eam1104I | CTCTTC | 1 cut(s) | 493 |
| EarI | CTCTTC | 1 cut(s) | 493 |
| EciI | GGCGGA | 2 cut(s) | 275, 354 |
| Eco147I | AGGCCT | 1 cut(s) | 67 |
| FaeI | CATG | 2 cut(s) | 388, 598 |
| FaiI | YATR | 4 cut(s) | 102, 237, 386, 596 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 100, 132 |
| FaqI | GGGAC | 1 cut(s) | 187 |
| FatI | CATG | 2 cut(s) | 384, 594 |
| FauI | CCCGC | 2 cut(s) | 157, 403 |
| FbaI | TGATCA | 1 cut(s) | 250 |
| Fnu4HI | GCNGC | 4 cut(s) | 36, 186, 258, 368 |
| Fsp4HI | GCNGC | 4 cut(s) | 36, 186, 258, 368 |
| FspBI | CTAG | 4 cut(s) | 14, 515, 638, 687 |
| GluI | GCNGC | 4 cut(s) | 36, 186, 258, 368 |
| HaeIII | GGCC | 2 cut(s) | 35, 67 |
| HgaI | GACGC | 1 cut(s) | 122 |
| Hin1II | CATG | 2 cut(s) | 388, 598 |
| HinfI | GANTC | 4 cut(s) | 263, 429, 483, 690 |
| Hpy188I | TCNGA | 2 cut(s) | 413, 488 |
| Hpy188III | TCNNGA | 2 cut(s) | 120, 638 |
| Hpy99I | CGWCG | 2 cut(s) | 215, 443 |
| HpyAV | CCTTC | 2 cut(s) | 78, 720 |
| HpyCH4III | ACNGT | 2 cut(s) | 270, 350 |
| HpyCH4IV | ACGT | 2 cut(s) | 245, 747 |
| HpyCH4V | TGCA | 1 cut(s) | 360 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 23, 32, 56, 231, 395 |
| HpySE526I | ACGT | 2 cut(s) | 245, 747 |
| Hsp92II | CATG | 2 cut(s) | 388, 598 |
| Ksp22I | TGATCA | 1 cut(s) | 250 |
| Kzo9I | GATC | 4 cut(s) | 151, 250, 408, 572 |
| LmnI | GCTCC | 5 cut(s) | 134, 215, 284, 539, 611 |
| LpnPI | CCDG | 6 cut(s) | 3, 57, 105, 528, 567, 592 |
| LweI | GCATC | 1 cut(s) | 46 |
| MaeI | CTAG | 4 cut(s) | 14, 515, 638, 687 |
| MaeII | ACGT | 2 cut(s) | 245, 747 |
| MaeIII | GTNAC | 5 cut(s) | 86, 110, 143, 461, 602 |
| MalI | GATC | 4 cut(s) | 153, 252, 410, 574 |
| MbiI | CCGCTC | 1 cut(s) | 38 |
| MboI | GATC | 4 cut(s) | 151, 250, 408, 572 |
| MboII | GAAGA | 3 cut(s) | 510, 705, 732 |
| MflI | RGATCY | 1 cut(s) | 151 |
| MluCI | AATT | 2 cut(s) | 414, 616 |
| MlyI | GAGTC | 2 cut(s) | 257, 699 |
| MnlI | CCTC | 5 cut(s) | 98, 416, 419, 467, 530 |
| MseI | TTAA | 5 cut(s) | 77, 191, 372, 552, 757 |
| MslI | CAYNNNNRTG | 1 cut(s) | 271 |
| Mva1269I | GAATGC | 2 cut(s) | 236, 634 |
| MvnI | CGCG | 1 cut(s) | 257 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 23, 32, 56, 231, 395 |
| NdeII | GATC | 4 cut(s) | 151, 250, 408, 572 |
| NlaIII | CATG | 2 cut(s) | 388, 598 |
| NmeAIII | GCCGAG | 1 cut(s) | 140 |
| NmuCI | GTSAC | 2 cut(s) | 86, 110 |
| OliI | CACNNNNGTG | 1 cut(s) | 271 |
| PceI | AGGCCT | 1 cut(s) | 67 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 438 |
| PctI | GAATGC | 2 cut(s) | 236, 634 |
| PfeI | GAWTC | 2 cut(s) | 429, 483 |
| PkrI | GCNGC | 4 cut(s) | 37, 187, 259, 369 |
| PleI | GAGTC | 2 cut(s) | 257, 698 |
| PpsI | GAGTC | 2 cut(s) | 257, 698 |
| Psp1406I | AACGTT | 1 cut(s) | 747 |
| PsuI | RGATCY | 1 cut(s) | 151 |
| RsaI | GTAC | 1 cut(s) | 170 |
| RsaNI | GTAC | 1 cut(s) | 169 |
| RseI | CAYNNNNRTG | 1 cut(s) | 271 |
| SaqAI | TTAA | 5 cut(s) | 77, 191, 372, 552, 757 |
| SatI | GCNGC | 4 cut(s) | 36, 186, 258, 368 |
| Sau3AI | GATC | 4 cut(s) | 151, 250, 408, 572 |
| SchI | GAGTC | 2 cut(s) | 257, 699 |
| SfaNI | GCATC | 1 cut(s) | 46 |
| SfcI | CTRYAG | 1 cut(s) | 235 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 271 |
| Sse9I | AATT | 2 cut(s) | 414, 616 |
| SseBI | AGGCCT | 1 cut(s) | 67 |
| SspI | AATATT | 1 cut(s) | 523 |
| SspMI | CTAG | 4 cut(s) | 14, 515, 638, 687 |
| StuI | AGGCCT | 1 cut(s) | 67 |
| TaaI | ACNGT | 2 cut(s) | 270, 350 |
| TaiI | ACGT | 2 cut(s) | 248, 750 |
| TaqI | TCGA | 3 cut(s) | 381, 510, 626 |
| TasI | AATT | 2 cut(s) | 414, 616 |
| TauI | GCSGC | 4 cut(s) | 38, 188, 260, 370 |
| TfiI | GAWTC | 2 cut(s) | 429, 483 |
| Tru1I | TTAA | 5 cut(s) | 77, 191, 372, 552, 757 |
| Tru9I | TTAA | 5 cut(s) | 77, 191, 372, 552, 757 |
| TseFI | GTSAC | 2 cut(s) | 86, 110 |
| Tsp45I | GTSAC | 2 cut(s) | 86, 110 |
| TspGWI | ACGGA | 3 cut(s) | 162, 228, 510 |
| XapI | RAATTY | 1 cut(s) | 414 |
| XbaI | TCTAGA | 1 cut(s) | 637 |
| XspI | CTAG | 4 cut(s) | 14, 515, 638, 687 |