No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G22250 AT1G78170 AT4G08910 |
| fragaria_vesca | FvH4_5g37370 |
| malus_domestica | MD08G1182400.v1.1 MD15G1368100.v1.1 |
| prunus_persica | Prupe.1G516300_v2.0.a1 |
| pyrus_communis | pycom08g15620 pycom15g33000 |
| rosa_chinensis | RchiOBHm_Chr7g0239041 |
| rosa_laevigata | RLG00000000788 |
| rosa_multiflora | Rmu_sc0005651.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00221340 |
| rosa_rugosa | Rorug07G0324800 |
| rosa_samantha | Rh7AG479700 Rh7BG452500 Rh7CG497200 Rh7DG464700 |
| rosa_wichuraiana | Rw7G040110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 17 |
| AciI | CCGC | 1 cut(s) | 336 |
| AclWI | GGATC | 2 cut(s) | 51, 390 |
| AcsI | RAATTY | 3 cut(s) | 119, 530, 580 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 17, 405 |
| AgsI | TTSAA | 5 cut(s) | 85, 152, 236, 268, 419 |
| AjnI | CCWGG | 1 cut(s) | 252 |
| AluBI | AGCT | 3 cut(s) | 199, 555, 592 |
| AluI | AGCT | 3 cut(s) | 199, 555, 592 |
| Alw26I | GTCTC | 1 cut(s) | 221 |
| AlwI | GGATC | 2 cut(s) | 51, 390 |
| ApoI | RAATTY | 3 cut(s) | 119, 530, 580 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 565, 597 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 69 |
| AspLEI | GCGC | 1 cut(s) | 173 |
| AspS9I | GGNCC | 1 cut(s) | 256 |
| AsuHPI | GGTGA | 4 cut(s) | 194, 379, 389, 434 |
| AsuNHI | GCTAGC | 1 cut(s) | 409 |
| AvaII | GGWCC | 1 cut(s) | 256 |
| BccI | CCATC | 1 cut(s) | 11 |
| BciT130I | CCWGG | 1 cut(s) | 254 |
| BclI | TGATCA | 2 cut(s) | 345, 547 |
| BcoDI | GTCTC | 1 cut(s) | 221 |
| BfaI | CTAG | 3 cut(s) | 206, 410, 601 |
| BfoI | RGCGCY | 1 cut(s) | 174 |
| Bme1390I | CCNGG | 1 cut(s) | 254 |
| Bme18I | GGWCC | 1 cut(s) | 256 |
| BmgT120I | GGNCC | 1 cut(s) | 256 |
| BmrFI | CCNGG | 1 cut(s) | 254 |
| BmtI | GCTAGC | 1 cut(s) | 413 |
| BsaBI | GATNNNNATC | 1 cut(s) | 435 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 17, 405 |
| Bse8I | GATNNNNATC | 1 cut(s) | 435 |
| BseBI | CCWGG | 1 cut(s) | 254 |
| BseJI | GATNNNNATC | 1 cut(s) | 435 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 17, 405 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 17, 405 |
| BsmAI | GTCTC | 1 cut(s) | 221 |
| Bsp143I | GATC | 8 cut(s) | 43, 103, 155, 238, 345, 371, 395, 547 |
| BspACI | CCGC | 1 cut(s) | 336 |
| BspOI | GCTAGC | 1 cut(s) | 413 |
| BspPI | GGATC | 2 cut(s) | 51, 390 |
| BssMI | GATC | 8 cut(s) | 43, 103, 155, 238, 345, 371, 395, 547 |
| Bst2UI | CCWGG | 1 cut(s) | 254 |
| Bst4CI | ACNGT | 3 cut(s) | 343, 466, 567 |
| BstC8I | GCNNGC | 1 cut(s) | 411 |
| BstDEI | CTNAG | 2 cut(s) | 213, 389 |
| BstH2I | RGCGCY | 1 cut(s) | 174 |
| BstHHI | GCGC | 1 cut(s) | 173 |
| BstKTI | GATC | 8 cut(s) | 46, 106, 158, 241, 348, 374, 398, 550 |
| BstMAI | GTCTC | 1 cut(s) | 221 |
| BstMBI | GATC | 8 cut(s) | 43, 103, 155, 238, 345, 371, 395, 547 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 493 |
| BstNI | CCWGG | 1 cut(s) | 254 |
| BstNSI | RCATGY | 1 cut(s) | 487 |
| BstSCI | CCNGG | 1 cut(s) | 252 |
| BtsIMutI | CAGTG | 1 cut(s) | 471 |
| Cac8I | GCNNGC | 1 cut(s) | 411 |
| CfoI | GCGC | 1 cut(s) | 173 |
| Cfr13I | GGNCC | 1 cut(s) | 256 |
| CviAII | CATG | 8 cut(s) | 14, 74, 175, 310, 472, 484, 535, 542 |
| CviJI | RGCY | 8 cut(s) | 187, 199, 212, 354, 388, 409, 555, 592 |
| CviKI_1 | RGCY | 8 cut(s) | 187, 199, 212, 354, 388, 409, 555, 592 |
| DdeI | CTNAG | 2 cut(s) | 213, 389 |
| DpnI | GATC | 8 cut(s) | 45, 105, 157, 240, 347, 373, 397, 549 |
| DpnII | GATC | 8 cut(s) | 43, 103, 155, 238, 345, 371, 395, 547 |
| DraI | TTTAAA | 1 cut(s) | 579 |
| EciI | GGCGGA | 1 cut(s) | 351 |
| Eco47I | GGWCC | 1 cut(s) | 256 |
| EcoRII | CCWGG | 1 cut(s) | 252 |
| FaeI | CATG | 8 cut(s) | 17, 77, 178, 313, 475, 487, 538, 545 |
| FatI | CATG | 8 cut(s) | 13, 73, 174, 309, 471, 483, 534, 541 |
| FauNDI | CATATG | 1 cut(s) | 48 |
| FbaI | TGATCA | 2 cut(s) | 345, 547 |
| FspBI | CTAG | 3 cut(s) | 206, 410, 601 |
| GlaI | GCGC | 1 cut(s) | 172 |
| HaeII | RGCGCY | 1 cut(s) | 174 |
| HhaI | GCGC | 1 cut(s) | 173 |
| Hin1II | CATG | 8 cut(s) | 17, 77, 178, 313, 475, 487, 538, 545 |
| Hin6I | GCGC | 1 cut(s) | 171 |
| HinP1I | GCGC | 1 cut(s) | 171 |
| HinfI | GANTC | 1 cut(s) | 65 |
| HphI | GGTGA | 4 cut(s) | 194, 379, 389, 434 |
| Hpy188I | TCNGA | 4 cut(s) | 166, 226, 441, 573 |
| HpyAV | CCTTC | 2 cut(s) | 358, 413 |
| HpyCH4III | ACNGT | 3 cut(s) | 343, 466, 567 |
| HpyCH4V | TGCA | 4 cut(s) | 471, 501, 528, 538 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 493 |
| HpyF3I | CTNAG | 2 cut(s) | 213, 389 |
| Hsp92II | CATG | 8 cut(s) | 17, 77, 178, 313, 475, 487, 538, 545 |
| HspAI | GCGC | 1 cut(s) | 171 |
| Ksp22I | TGATCA | 2 cut(s) | 345, 547 |
| Kzo9I | GATC | 8 cut(s) | 43, 103, 155, 238, 345, 371, 395, 547 |
| LmnI | GCTCC | 2 cut(s) | 90, 560 |
| LpnPI | CCDG | 5 cut(s) | 201, 239, 266, 360, 473 |
| MaeI | CTAG | 3 cut(s) | 206, 410, 601 |
| MaeIII | GTNAC | 1 cut(s) | 479 |
| MalI | GATC | 8 cut(s) | 45, 105, 157, 240, 347, 373, 397, 549 |
| MboI | GATC | 8 cut(s) | 43, 103, 155, 238, 345, 371, 395, 547 |
| MboII | GAAGA | 3 cut(s) | 139, 248, 454 |
| MluCI | AATT | 4 cut(s) | 119, 262, 530, 580 |
| MnlI | CCTC | 3 cut(s) | 33, 202, 301 |
| MroXI | GAANNNNTTC | 1 cut(s) | 69 |
| MseI | TTAA | 3 cut(s) | 261, 578, 588 |
| MslI | CAYNNNNRTG | 1 cut(s) | 543 |
| MspR9I | CCNGG | 1 cut(s) | 254 |
| MvaI | CCWGG | 1 cut(s) | 254 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 493 |
| NdeI | CATATG | 1 cut(s) | 48 |
| NdeII | GATC | 8 cut(s) | 43, 103, 155, 238, 345, 371, 395, 547 |
| NheI | GCTAGC | 1 cut(s) | 409 |
| NlaIII | CATG | 8 cut(s) | 17, 77, 178, 313, 475, 487, 538, 545 |
| NmuCI | GTSAC | 1 cut(s) | 479 |
| NspI | RCATGY | 1 cut(s) | 487 |
| PdmI | GAANNNNTTC | 1 cut(s) | 69 |
| PfeI | GAWTC | 1 cut(s) | 65 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 17 |
| Psp6I | CCWGG | 1 cut(s) | 252 |
| PspGI | CCWGG | 1 cut(s) | 252 |
| PspPI | GGNCC | 1 cut(s) | 256 |
| RseI | CAYNNNNRTG | 1 cut(s) | 543 |
| SaqAI | TTAA | 3 cut(s) | 261, 578, 588 |
| Sau3AI | GATC | 8 cut(s) | 43, 103, 155, 238, 345, 371, 395, 547 |
| Sau96I | GGNCC | 1 cut(s) | 256 |
| ScrFI | CCNGG | 1 cut(s) | 254 |
| SinI | GGWCC | 1 cut(s) | 256 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 543 |
| Sse9I | AATT | 4 cut(s) | 119, 262, 530, 580 |
| SsiI | CCGC | 1 cut(s) | 336 |
| SspMI | CTAG | 3 cut(s) | 206, 410, 601 |
| StyD4I | CCNGG | 1 cut(s) | 252 |
| TaaI | ACNGT | 3 cut(s) | 343, 466, 567 |
| TaqI | TCGA | 1 cut(s) | 394 |
| TasI | AATT | 4 cut(s) | 119, 262, 530, 580 |
| TfiI | GAWTC | 1 cut(s) | 65 |
| Tru1I | TTAA | 3 cut(s) | 261, 578, 588 |
| Tru9I | TTAA | 3 cut(s) | 261, 578, 588 |
| TscAI | CASTG | 1 cut(s) | 471 |
| TseFI | GTSAC | 1 cut(s) | 479 |
| Tsp45I | GTSAC | 1 cut(s) | 479 |
| TspDTI | ATGAA | 5 cut(s) | 62, 65, 336, 488, 523 |
| TspRI | CASTG | 1 cut(s) | 471 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 17 |
| VpaK11BI | GGWCC | 1 cut(s) | 256 |
| XapI | RAATTY | 3 cut(s) | 119, 530, 580 |
| XceI | RCATGY | 1 cut(s) | 487 |
| XmnI | GAANNNNTTC | 1 cut(s) | 69 |
| XspI | CTAG | 3 cut(s) | 206, 410, 601 |