Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012185

Physical Location & Seq

Genomic Coordinates Reverse (-)

8933716 .. 8935544

Gene Structure 1829 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G25440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1254 bp

ATGATGAAAAGTTTGGCGAATGCTGTTGGAGCGAAGACGGCGAGGGCTTGCGACAGCTGCGTGAAGAGACGTGCACGGTGGTACTGCGCGGCCGACGATGCTTTTCTTTGCCAGTCTTGCGACAGTTTGGTCCATTCAGCAAACCCTCTTGCTCGCCGCCACGAGAGAGTCCGTTTGAAGACGGCTAGCCCGGCGGTCGTAAAGCATAGCAACCACTCATCAGCTTCTCCTCCACATGAGGTCGCCACGTGGCATCACGGGTTTACTCGTAAAGCTCGAACGCCACGTGGCTCTGGTAAGAAAAACAATTCGTCGATATTTCATGACTTGGTTCCTGATATTAGTATTGAGGATCAGACAGACAACTATGAGCTTGAAGAGCAGCTGATCTGTCAAGTGCCGGTTCTAGATCCGTTGGTGTCTGAGCAGTTCTTGAACGATGTCGTTGAGCCCAAGATCGAGTTTCCTATGATCAGAAGTGGTTTGATGATCGAGGAGGAGGAAGACAACGCTGAAAGTTGTCTTAATGGATTTTTCCCGACCGACATGGAGCTTGAGGAGTTTGCTGCTGACGTGGAGACTCTGCTCGGTCGCGGGTTAGACACGGAGTCGTATGCCATGGAGGAGCTAGGGTTATCTAATTCAGAGATGTTCAAAATCGAAAAAGATGAGATTGAAGAAGAAGTAGAAGAGATAAAAGCCATGAGCATGGATATATTTGATGATGATCGAAAAGACGTGGATGGAACAGTACCGTTTGAGCTAAGCTTTGATTACGAGTCGTCACACAAGACGTCCGAAGAAGAGGTAATGAAGAACGTTGAAAGTAGTGGTGAATGTGTTGTTAAGGTGAAAGAGGAAGAACATAAGAATGTTCTGATGCTAAGATTAAACTATGACTCGGTGATATCCACTTGGGGAGGTCAAGGTCCACCGTGGAGTTCAGGAGAGCCACCGGAACGAGACATGGACATCAGCGGTTGGCCAGCCTTTTCCATGGTGGAGAATGGAGGAGAAAGTACTCATCAGAAGCAATACGTTGGTGGATGTTTACCATCAAGTGGGTTTGGAGATGGAGGTAGAGAAGCTAGAGTTTCGAGATACAGAGAGAAGAGGAGGACAAGGTTGTTTTCTAAGAAGATACGGTACGAGGTACGTAAATTGAATGCAGAGAAAAGACCACGAATGAAAGGAAGATTCGTGAAGAGAGCCTCGCTCGCTGCTGCTGCTTCACCATTAGGTGTTAATTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006355 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009641 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0048367 GO:0048518 GO:0048522 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CCT zf-B_box

Protein Analysis

417

Amino Acids

46.93

Weight (kDa)

5.21

Isoelectric Point (pI)

61.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-B_box	PF00643	14 - 57	8e-07	B-box zinc finger
CCT	PF06203	361 - 403	5.5e-17	CCT motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012185)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25440 AT1G68520
fragaria_vesca	FvH4_4g27390
malus_domestica	MD13G1042200.v1.1 MD16G1043000.v1.1
prunus_persica	Prupe.1G310900_v2.0.a1
pyrus_communis	pycom13g03650 pycom16g03710
rosa_chinensis	RchiOBHm_Chr4g0435191
rosa_laevigata	RLG00000006610
rosa_multiflora	Rmu_ssc0000339.1_g000030
rosa_roxburghii	Rroxscaffold_5G00376410
rosa_rugosa	Rorug04G0282900 Rorug04G0283000
rosa_samantha	Rh4AG338700 Rh4BG346800 Rh4CG361400 Rh4DG341200
rosa_wichuraiana	Rw4G029540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	128
AatII	GACGTC	1 cut(s)	797
AccB7I	CCANNNNNTGG	1 cut(s)	1061
AccII	CGCG	2 cut(s)	89, 594
AciI	CCGC	5 cut(s)	89, 157, 194, 594, 978
AclI	AACGTT	1 cut(s)	819
AclWI	GGATC	2 cut(s)	360, 404
AcoI	YGGCCR	2 cut(s)	90, 983
AcvI	CACGTG	2 cut(s)	249, 287
AcyI	GRCGYC	1 cut(s)	794
AfaI	GTAC	5 cut(s)	83, 753, 1021, 1148, 1155
AfiI	CCNNNNNNNGG	1 cut(s)	1061
AgsI	TTSAA	7 cut(s)	178, 377, 436, 655, 677, 824, 1165
AhdI	GACNNNNNGTC	1 cut(s)	607
AjiI	CACGTC	3 cut(s)	71, 574, 739
Alw21I	GWGCWC	1 cut(s)	76
Alw26I	GTCTC	3 cut(s)	61, 572, 957
Alw44I	GTGCAC	1 cut(s)	72
AlwI	GGATC	2 cut(s)	360, 404
AoxI	GGCC	2 cut(s)	90, 983
ApaLI	GTGCAC	1 cut(s)	72
ApeKI	GCWGC	6 cut(s)	57, 382, 566, 1220, 1223, 1226
AspLEI	GCGC	1 cut(s)	89
AspS9I	GGNCC	2 cut(s)	130, 929
AsuC2I	CCSGG	1 cut(s)	191
AsuHPI	GGTGA	4 cut(s)	845, 862, 916, 1224
AsuNHI	GCTAGC	1 cut(s)	185
AvaII	GGWCC	2 cut(s)	130, 929
BaeGI	GKGCMC	1 cut(s)	76
BalI	TGGCCA	1 cut(s)	985
BanII	GRGCYC	1 cut(s)	453
BarI	GAAGNNNNNNTAC	2 cut(s)	1130, 1162
BauI	CACGAG	1 cut(s)	161
BbrPI	CACGTG	2 cut(s)	249, 287
BbsI	GAAGAC	3 cut(s)	41, 185, 510
Bbv12I	GWGCWC	1 cut(s)	76
BbvI	GCAGC	6 cut(s)	44, 394, 553, 1207, 1210, 1213
BccI	CCATC	3 cut(s)	737, 1063, 1067
BceAI	ACGGC	2 cut(s)	54, 198
BclI	TGATCA	1 cut(s)	471
BcnI	CCSGG	1 cut(s)	191
BcoDI	GTCTC	3 cut(s)	61, 572, 957
BfaI	CTAG	4 cut(s)	186, 407, 629, 1089
BisI	GCNGC	8 cut(s)	58, 90, 157, 383, 567, 1221, 1224, 1227
BlpI	GCTNAGC	1 cut(s)	764
BlsI	GCNGC	8 cut(s)	59, 91, 158, 384, 568, 1222, 1225, 1228
BmcAI	AGTACT	1 cut(s)	1021
Bme1390I	CCNGG	1 cut(s)	191
Bme18I	GGWCC	2 cut(s)	130, 929
BmeRI	GACNNNNNGTC	1 cut(s)	607
BmgBI	CACGTC	3 cut(s)	71, 574, 739
BmgT120I	GGNCC	2 cut(s)	130, 929
BmiI	GGNNCC	1 cut(s)	333
BmrFI	CCNGG	1 cut(s)	191
BmsI	GCATC	3 cut(s)	88, 262, 870
BmtI	GCTAGC	1 cut(s)	189
BpiI	GAAGAC	3 cut(s)	41, 185, 510
BplI	GAGNNNNNCTC	2 cut(s)	1200, 1232
Bpu1102I	GCTNAGC	1 cut(s)	764
BpuEI	CTTGAG	1 cut(s)	575
BpuMI	CCSGG	1 cut(s)	191
BsaAI	YACGTR	3 cut(s)	249, 287, 1157
BsaBI	GATNNNNATC	1 cut(s)	726
BsaHI	GRCGYC	1 cut(s)	794
BsaJI	CCNNGG	3 cut(s)	618, 935, 996
BsaWI	WCCGGW	1 cut(s)	955
BsaXI	ACNNNNNCTCC	2 cut(s)	617, 647
Bsc4I	CCNNNNNNNGG	1 cut(s)	1061
Bse118I	RCCGGY	1 cut(s)	400
Bse1I	ACTGG	1 cut(s)	112
Bse8I	GATNNNNATC	1 cut(s)	726
BseDI	CCNNGG	3 cut(s)	618, 935, 996
BseGI	GGATG	2 cut(s)	748, 1052
BseJI	GATNNNNATC	1 cut(s)	726
BseLI	CCNNNNNNNGG	1 cut(s)	1061
BseMII	CTCAG	1 cut(s)	414
BseNI	ACTGG	1 cut(s)	112
BseRI	GAGGAG	7 cut(s)	219, 509, 512, 572, 638, 1026, 1129
BseSI	GKGCMC	1 cut(s)	76
BseX3I	CGGCCG	1 cut(s)	90
BseXI	GCAGC	6 cut(s)	44, 394, 553, 1207, 1210, 1213
Bsh1236I	CGCG	2 cut(s)	89, 594
Bsh1285I	CGRYCG	4 cut(s)	93, 198, 543, 592
BshFI	GGCC	2 cut(s)	92, 985
BsiEI	CGRYCG	4 cut(s)	93, 198, 543, 592
BsiHKAI	GWGCWC	1 cut(s)	76
BsiSI	CCGG	3 cut(s)	191, 401, 956
BslI	CCNNNNNNNGG	1 cut(s)	1061
BsmAI	GTCTC	3 cut(s)	61, 572, 957
BsmBI	CGTCTC	1 cut(s)	61
BsmI	GAATGC	2 cut(s)	25, 1171
BsnI	GGCC	2 cut(s)	92, 985
Bsp1286I	GDGCHC	2 cut(s)	76, 453
Bsp143I	GATC	7 cut(s)	352, 387, 409, 456, 471, 489, 727
Bsp1720I	GCTNAGC	1 cut(s)	764
Bsp19I	CCATGG	2 cut(s)	618, 996
BspACI	CCGC	5 cut(s)	89, 157, 194, 594, 978
BspANI	GGCC	2 cut(s)	92, 985
BspCNI	CTCAG	1 cut(s)	415
BspFNI	CGCG	2 cut(s)	89, 594
BspHI	TCATGA	1 cut(s)	322
BspLI	GGNNCC	1 cut(s)	333
BspOI	GCTAGC	1 cut(s)	189
BspPI	GGATC	2 cut(s)	360, 404
BspQI	GCTCTTC	1 cut(s)	372
BsrFI	RCCGGY	1 cut(s)	400
BsrI	ACTGG	1 cut(s)	112
BssAI	RCCGGY	1 cut(s)	400
BssECI	CCNNGG	3 cut(s)	618, 935, 996
BssMI	GATC	7 cut(s)	352, 387, 409, 456, 471, 489, 727
BssNI	GRCGYC	1 cut(s)	794
BssSI	CACGAG	1 cut(s)	161
BssT1I	CCWWGG	2 cut(s)	618, 996
Bst2BI	CACGAG	1 cut(s)	161
Bst4CI	ACNGT	6 cut(s)	78, 125, 751, 756, 936, 1146
Bst6I	CTCTTC	6 cut(s)	59, 372, 684, 798, 1106, 1199
BstACI	GRCGYC	1 cut(s)	794
BstBAI	YACGTR	3 cut(s)	249, 287, 1157
BstC8I	GCNNGC	5 cut(s)	49, 154, 187, 987, 1218
BstDEI	CTNAG	4 cut(s)	423, 764, 884, 1134
BstDSI	CCRYGG	3 cut(s)	618, 935, 996
BstF5I	GGATG	2 cut(s)	748, 1052
BstFNI	CGCG	2 cut(s)	89, 594
BstHHI	GCGC	1 cut(s)	89
BstKTI	GATC	7 cut(s)	355, 390, 412, 459, 474, 492, 730
BstMAI	GTCTC	3 cut(s)	61, 572, 957
BstMBI	GATC	7 cut(s)	352, 387, 409, 456, 471, 489, 727
BstMCI	CGRYCG	4 cut(s)	93, 198, 543, 592
BstMWI	GCNNNNNNNGC	9 cut(s)	29, 38, 57, 98, 117, 191, 379, 1217, 1226
BstSCI	CCNGG	1 cut(s)	189
BstSLI	GKGCMC	1 cut(s)	76
BstSNI	TACGTA	1 cut(s)	1157
BstUI	CGCG	2 cut(s)	89, 594
BstV1I	GCAGC	6 cut(s)	44, 394, 553, 1207, 1210, 1213
BstV2I	GAAGAC	3 cut(s)	41, 185, 510
BstX2I	RGATCY	1 cut(s)	409
BstXI	CCANNNNNNTGG	1 cut(s)	709
BstYI	RGATCY	1 cut(s)	409
BstZI	CGGCCG	1 cut(s)	90
BsuRI	GGCC	2 cut(s)	92, 985
BtgI	CCRYGG	3 cut(s)	618, 935, 996
BtrI	CACGTC	3 cut(s)	71, 574, 739
BtsCI	GGATG	2 cut(s)	748, 1052
Cac8I	GCNNGC	5 cut(s)	49, 154, 187, 987, 1218
CciI	TCATGA	1 cut(s)	322
CfoI	GCGC	1 cut(s)	89
Cfr10I	RCCGGY	1 cut(s)	400
Cfr13I	GGNCC	2 cut(s)	130, 929
Csp6I	GTAC	5 cut(s)	82, 752, 1020, 1147, 1154
CviAII	CATG	8 cut(s)	236, 323, 547, 619, 703, 709, 967, 997
CviQI	GTAC	5 cut(s)	82, 752, 1020, 1147, 1154
DdeI	CTNAG	4 cut(s)	423, 764, 884, 1134
DpnI	GATC	7 cut(s)	354, 389, 411, 458, 473, 491, 729
DpnII	GATC	7 cut(s)	352, 387, 409, 456, 471, 489, 727
DrdI	GACNNNNNNGTC	1 cut(s)	128
DriI	GACNNNNNGTC	1 cut(s)	607
DseDI	GACNNNNNNGTC	1 cut(s)	128
EaeI	YGGCCR	2 cut(s)	90, 983
EagI	CGGCCG	1 cut(s)	90
Eam1104I	CTCTTC	6 cut(s)	59, 372, 684, 798, 1106, 1199
Eam1105I	GACNNNNNGTC	1 cut(s)	607
EarI	CTCTTC	6 cut(s)	59, 372, 684, 798, 1106, 1199
EclXI	CGGCCG	1 cut(s)	90
Eco105I	TACGTA	1 cut(s)	1157
Eco130I	CCWWGG	2 cut(s)	618, 996
Eco24I	GRGCYC	1 cut(s)	453
Eco32I	GATATC	1 cut(s)	909
Eco47I	GGWCC	2 cut(s)	130, 929
Eco52I	CGGCCG	1 cut(s)	90
Eco72I	CACGTG	2 cut(s)	249, 287
EcoRV	GATATC	1 cut(s)	909
EcoT14I	CCWWGG	2 cut(s)	618, 996
EcoT38I	GRGCYC	1 cut(s)	453
ErhI	CCWWGG	2 cut(s)	618, 996
Esp3I	CGTCTC	1 cut(s)	61
FaeI	CATG	8 cut(s)	239, 326, 550, 622, 706, 712, 970, 1000
FatI	CATG	8 cut(s)	235, 322, 546, 618, 702, 708, 966, 996
FauI	CCCGC	1 cut(s)	587
FbaI	TGATCA	1 cut(s)	471
Fnu4HI	GCNGC	8 cut(s)	58, 90, 157, 383, 567, 1221, 1224, 1227
FokI	GGATG	2 cut(s)	755, 1059
FriOI	GRGCYC	1 cut(s)	453
Fsp4HI	GCNGC	8 cut(s)	58, 90, 157, 383, 567, 1221, 1224, 1227
FspBI	CTAG	4 cut(s)	186, 407, 629, 1089
GlaI	GCGC	1 cut(s)	88
GluI	GCNGC	8 cut(s)	58, 90, 157, 383, 567, 1221, 1224, 1227
HaeIII	GGCC	2 cut(s)	92, 985
HapII	CCGG	3 cut(s)	191, 401, 956
HhaI	GCGC	1 cut(s)	89
Hin1I	GRCGYC	1 cut(s)	794
Hin1II	CATG	8 cut(s)	239, 326, 550, 622, 706, 712, 970, 1000
Hin6I	GCGC	1 cut(s)	87
HinP1I	GCGC	1 cut(s)	87
HindIII	AAGCTT	1 cut(s)	766
HinfI	GANTC	6 cut(s)	168, 580, 608, 779, 899, 1197
HpaII	CCGG	3 cut(s)	191, 401, 956
HphI	GGTGA	4 cut(s)	845, 862, 916, 1224
Hpy166II	GTNNAC	4 cut(s)	74, 264, 932, 1052
Hpy188I	TCNGA	7 cut(s)	357, 424, 476, 646, 799, 879, 1029
Hpy188III	TCNNGA	8 cut(s)	323, 335, 407, 433, 538, 945, 1098, 1201
Hpy8I	GTNNAC	4 cut(s)	74, 264, 932, 1052
Hpy99I	CGWCG	2 cut(s)	98, 316
HpyCH4III	ACNGT	6 cut(s)	78, 125, 751, 756, 936, 1146
HpyCH4IV	ACGT	9 cut(s)	70, 248, 286, 573, 738, 794, 819, 1038, 1156
HpyCH4V	TGCA	2 cut(s)	74, 1169
HpyF10VI	GCNNNNNNNGC	9 cut(s)	29, 38, 57, 98, 117, 191, 379, 1217, 1226
HpyF3I	CTNAG	4 cut(s)	423, 764, 884, 1134
HpySE526I	ACGT	9 cut(s)	70, 248, 286, 573, 738, 794, 819, 1038, 1156
Hsp92I	GRCGYC	1 cut(s)	794
Hsp92II	CATG	8 cut(s)	239, 326, 550, 622, 706, 712, 970, 1000
HspAI	GCGC	1 cut(s)	87
Ksp22I	TGATCA	1 cut(s)	471
Kzo9I	GATC	7 cut(s)	352, 387, 409, 456, 471, 489, 727
LguI	GCTCTTC	1 cut(s)	372
LmnI	GCTCC	3 cut(s)	29, 550, 625
LpnPI	CCDG	8 cut(s)	125, 204, 279, 348, 414, 930, 969, 999
Lsp1109I	GCAGC	6 cut(s)	44, 394, 553, 1207, 1210, 1213
LweI	GCATC	3 cut(s)	88, 262, 870
MaeI	CTAG	4 cut(s)	186, 407, 629, 1089
MaeII	ACGT	9 cut(s)	70, 248, 286, 573, 738, 794, 819, 1038, 1156
MaeIII	GTNAC	1 cut(s)	783
MalI	GATC	7 cut(s)	354, 389, 411, 458, 473, 491, 729
MboI	GATC	7 cut(s)	352, 387, 409, 456, 471, 489, 727
MflI	RGATCY	1 cut(s)	409
MhlI	GDGCHC	2 cut(s)	76, 453
MlsI	TGGCCA	1 cut(s)	985
MluCI	AATT	4 cut(s)	307, 640, 1160, 1246
MluNI	TGGCCA	1 cut(s)	985
MlyI	GAGTC	5 cut(s)	177, 574, 617, 788, 893
MmeI	TCCRAC	1 cut(s)	7
Mox20I	TGGCCA	1 cut(s)	985
MscI	TGGCCA	1 cut(s)	985
MseI	TTAA	4 cut(s)	525, 846, 890, 1245
MslI	CAYNNNNRTG	2 cut(s)	707, 870
Msp20I	TGGCCA	1 cut(s)	985
MspA1I	CMGCKG	3 cut(s)	57, 385, 978
MspI	CCGG	3 cut(s)	191, 401, 956
MspR9I	CCNGG	1 cut(s)	191
Mva1269I	GAATGC	2 cut(s)	25, 1171
MvnI	CGCG	2 cut(s)	89, 594
MwoI	GCNNNNNNNGC	9 cut(s)	29, 38, 57, 98, 117, 191, 379, 1217, 1226
NciI	CCSGG	1 cut(s)	191
NcoI	CCATGG	2 cut(s)	618, 996
NdeII	GATC	7 cut(s)	352, 387, 409, 456, 471, 489, 727
NheI	GCTAGC	1 cut(s)	185
NlaIII	CATG	8 cut(s)	239, 326, 550, 622, 706, 712, 970, 1000
NlaIV	GGNNCC	1 cut(s)	333
NmuCI	GTSAC	1 cut(s)	783
PagI	TCATGA	1 cut(s)	322
PciSI	GCTCTTC	1 cut(s)	372
PcsI	WCGNNNNNNNCGW	2 cut(s)	274, 283
PctI	GAATGC	2 cut(s)	25, 1171
PfeI	GAWTC	1 cut(s)	1197
PflMI	CCANNNNNTGG	1 cut(s)	1061
PkrI	GCNGC	8 cut(s)	59, 91, 158, 384, 568, 1222, 1225, 1228
PleI	GAGTC	5 cut(s)	176, 574, 616, 787, 893
PmaCI	CACGTG	2 cut(s)	249, 287
PmlI	CACGTG	2 cut(s)	249, 287
PpsI	GAGTC	5 cut(s)	176, 574, 616, 787, 893
Ppu21I	YACGTR	3 cut(s)	249, 287, 1157
Psp1406I	AACGTT	1 cut(s)	819
PspCI	CACGTG	2 cut(s)	249, 287
PspN4I	GGNNCC	1 cut(s)	333
PspPI	GGNCC	2 cut(s)	130, 929
PsuI	RGATCY	1 cut(s)	409
PvuII	CAGCTG	2 cut(s)	57, 385
RsaI	GTAC	5 cut(s)	83, 753, 1021, 1148, 1155
RsaNI	GTAC	5 cut(s)	82, 752, 1020, 1147, 1154
RseI	CAYNNNNRTG	2 cut(s)	707, 870
SapI	GCTCTTC	1 cut(s)	372
SaqAI	TTAA	4 cut(s)	525, 846, 890, 1245
SatI	GCNGC	8 cut(s)	58, 90, 157, 383, 567, 1221, 1224, 1227
Sau3AI	GATC	7 cut(s)	352, 387, 409, 456, 471, 489, 727
Sau96I	GGNCC	2 cut(s)	130, 929
ScaI	AGTACT	1 cut(s)	1021
SchI	GAGTC	5 cut(s)	177, 574, 617, 788, 893
ScrFI	CCNGG	1 cut(s)	191
SduI	GDGCHC	2 cut(s)	76, 453
SfaNI	GCATC	3 cut(s)	88, 262, 870
SinI	GGWCC	2 cut(s)	130, 929
SmiMI	CAYNNNNRTG	2 cut(s)	707, 870
SmlI	CTYRAG	1 cut(s)	554
SmoI	CTYRAG	1 cut(s)	554
SnaBI	TACGTA	1 cut(s)	1157
Sse9I	AATT	4 cut(s)	307, 640, 1160, 1246
SsiI	CCGC	5 cut(s)	89, 157, 194, 594, 978
SspMI	CTAG	4 cut(s)	186, 407, 629, 1089
StyD4I	CCNGG	1 cut(s)	189
StyI	CCWWGG	2 cut(s)	618, 996
TaaI	ACNGT	6 cut(s)	78, 125, 751, 756, 936, 1146
TaiI	ACGT	9 cut(s)	73, 251, 289, 576, 741, 797, 822, 1041, 1159
TaqI	TCGA	7 cut(s)	277, 314, 459, 492, 660, 730, 1097
TaqII	GACCGA	2 cut(s)	557, 578
TasI	AATT	4 cut(s)	307, 640, 1160, 1246
TatI	WGTACW	1 cut(s)	1019
TauI	GCSGC	2 cut(s)	92, 159
TfiI	GAWTC	1 cut(s)	1197
Tru1I	TTAA	4 cut(s)	525, 846, 890, 1245
Tru9I	TTAA	4 cut(s)	525, 846, 890, 1245
TseFI	GTSAC	1 cut(s)	783
TseI	GCWGC	6 cut(s)	57, 382, 566, 1220, 1223, 1226
Tsp45I	GTSAC	1 cut(s)	783
TspDTI	ATGAA	4 cut(s)	20, 311, 827, 1202
TspGWI	ACGGA	3 cut(s)	161, 402, 620
Van91I	CCANNNNNTGG	1 cut(s)	1061
VneI	GTGCAC	1 cut(s)	72
VpaK11BI	GGWCC	2 cut(s)	130, 929
XbaI	TCTAGA	1 cut(s)	406
XspI	CTAG	4 cut(s)	186, 407, 629, 1089
ZraI	GACGTC	1 cut(s)	795
ZrmI	AGTACT	1 cut(s)	1021

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.