malate transporter
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G25480 |
| fragaria_vesca | FvH4_4g27691 FvH4_4g27693 FvH4_4g27693 FvH4_4g27693 FvH4_4g27693 FvH4_4g27693 FvH4_4g27693 |
| malus_domestica | MD13G1044400.v1.1 |
| prunus_persica | Prupe.1G308100_v2.0.a1 |
| pyrus_communis | pycom13g03900 pycom16g03980 |
| rosa_chinensis | RchiOBHm_Chr4g0435551 |
| rosa_laevigata | RLG00000006583 |
| rosa_multiflora | Rmu_sc0001940.1_g000036 |
| rosa_roxburghii | Rroxscaffold_5G00376780 |
| rosa_rugosa | Rorug04G0286100 Rorug04G0286200 Rorug04G0286300 Rorug04G0286400 |
| rosa_samantha | Rh4AG341900 Rh4BG350100 Rh4CG364800 Rh4DG344400 |
| rosa_wichuraiana | Rw4G029820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 467 |
| AccII | CGCG | 2 cut(s) | 1437, 1586 |
| AciI | CCGC | 2 cut(s) | 1435, 1467 |
| AclI | AACGTT | 1 cut(s) | 1155 |
| AclWI | GGATC | 3 cut(s) | 134, 298, 821 |
| AcoI | YGGCCR | 2 cut(s) | 732, 1445 |
| AcsI | RAATTY | 3 cut(s) | 437, 718, 1026 |
| AcuI | CTGAAG | 1 cut(s) | 1290 |
| AdeI | CACNNNGTG | 1 cut(s) | 275 |
| AfaI | GTAC | 1 cut(s) | 764 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 99, 195, 820, 914, 943, 1342 |
| AflIII | ACRYGT | 1 cut(s) | 1584 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1309 |
| AhlI | ACTAGT | 1 cut(s) | 706 |
| AjnI | CCWGG | 3 cut(s) | 137, 630, 1147 |
| Alw26I | GTCTC | 3 cut(s) | 1459, 1545, 1628 |
| AlwI | GGATC | 3 cut(s) | 134, 298, 821 |
| AoxI | GGCC | 2 cut(s) | 732, 1445 |
| ApeKI | GCWGC | 4 cut(s) | 1011, 1034, 1178, 1244 |
| ApoI | RAATTY | 3 cut(s) | 437, 718, 1026 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 24 |
| AspLEI | GCGC | 3 cut(s) | 971, 986, 1279 |
| AspS9I | GGNCC | 1 cut(s) | 917 |
| AsuC2I | CCSGG | 1 cut(s) | 509 |
| AsuII | TTCGAA | 1 cut(s) | 797 |
| AsuNHI | GCTAGC | 2 cut(s) | 281, 1525 |
| AvaII | GGWCC | 1 cut(s) | 917 |
| BalI | TGGCCA | 2 cut(s) | 734, 1447 |
| BbsI | GAAGAC | 1 cut(s) | 699 |
| BbvCI | CCTCAGC | 1 cut(s) | 1331 |
| BbvI | GCAGC | 4 cut(s) | 998, 1046, 1190, 1231 |
| BccI | CCATC | 4 cut(s) | 172, 214, 220, 945 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 24, 58, 143, 177, 1040, 1074, 1541, 1575 |
| BciT130I | CCWGG | 3 cut(s) | 139, 632, 1149 |
| BciVI | GTATCC | 1 cut(s) | 836 |
| BclI | TGATCA | 1 cut(s) | 1476 |
| BcnI | CCSGG | 1 cut(s) | 509 |
| BcoDI | GTCTC | 3 cut(s) | 1459, 1545, 1628 |
| BcuI | ACTAGT | 1 cut(s) | 706 |
| BfaI | CTAG | 6 cut(s) | 15, 282, 414, 588, 707, 1526 |
| BfmI | CTRYAG | 3 cut(s) | 372, 852, 1190 |
| BfuAI | ACCTGC | 1 cut(s) | 467 |
| BfuI | GTATCC | 1 cut(s) | 836 |
| BisI | GCNGC | 4 cut(s) | 1012, 1035, 1179, 1245 |
| BlpI | GCTNAGC | 1 cut(s) | 1142 |
| BlsI | GCNGC | 4 cut(s) | 1013, 1036, 1180, 1246 |
| Bme1390I | CCNGG | 4 cut(s) | 139, 509, 632, 1149 |
| Bme18I | GGWCC | 1 cut(s) | 917 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1309 |
| BmgT120I | GGNCC | 1 cut(s) | 917 |
| BmiI | GGNNCC | 4 cut(s) | 906, 1093, 1433, 1568 |
| BmrFI | CCNGG | 4 cut(s) | 139, 509, 632, 1149 |
| BmsI | GCATC | 1 cut(s) | 1413 |
| BmtI | GCTAGC | 2 cut(s) | 285, 1529 |
| BpiI | GAAGAC | 1 cut(s) | 699 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 681, 713 |
| BpmI | CTGGAG | 4 cut(s) | 411, 453, 708, 1023 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1331, 1427 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1142 |
| Bpu14I | TTCGAA | 1 cut(s) | 797 |
| BpuEI | CTTGAG | 2 cut(s) | 1123, 1145 |
| BpuMI | CCSGG | 1 cut(s) | 509 |
| Bsa29I | ATCGAT | 1 cut(s) | 78 |
| BsaJI | CCNNGG | 3 cut(s) | 941, 1147, 1148 |
| BsaWI | WCCGGW | 1 cut(s) | 99 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1083, 1107, 1113, 1137, 1196, 1226 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 99, 195, 820, 914, 943, 1342 |
| Bse1I | ACTGG | 1 cut(s) | 1448 |
| Bse3DI | GCAATG | 3 cut(s) | 471, 776, 1008 |
| BseBI | CCWGG | 3 cut(s) | 139, 632, 1149 |
| BseCI | ATCGAT | 1 cut(s) | 78 |
| BseDI | CCNNGG | 3 cut(s) | 941, 1147, 1148 |
| BseGI | GGATG | 5 cut(s) | 231, 755, 829, 937, 1171 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 99, 195, 820, 914, 943, 1342 |
| BseMI | GCAATG | 3 cut(s) | 471, 776, 1008 |
| BseMII | CTCAG | 4 cut(s) | 60, 1245, 1345, 1409 |
| BseNI | ACTGG | 1 cut(s) | 1448 |
| BseXI | GCAGC | 4 cut(s) | 998, 1046, 1190, 1231 |
| BseYI | CCCAGC | 1 cut(s) | 1239 |
| Bsh1236I | CGCG | 2 cut(s) | 1437, 1586 |
| Bsh1285I | CGRYCG | 1 cut(s) | 193 |
| BshFI | GGCC | 2 cut(s) | 734, 1447 |
| BshVI | ATCGAT | 1 cut(s) | 78 |
| BsiEI | CGRYCG | 1 cut(s) | 193 |
| BsiSI | CCGG | 2 cut(s) | 100, 509 |
| BslFI | GGGAC | 1 cut(s) | 1358 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 99, 195, 820, 914, 943, 1342 |
| BsmAI | GTCTC | 3 cut(s) | 1459, 1545, 1628 |
| BsmBI | CGTCTC | 2 cut(s) | 1459, 1545 |
| BsmFI | GGGAC | 1 cut(s) | 1358 |
| BsmI | GAATGC | 2 cut(s) | 533, 1014 |
| BsnI | GGCC | 2 cut(s) | 734, 1447 |
| Bsp119I | TTCGAA | 1 cut(s) | 797 |
| Bsp143I | GATC | 6 cut(s) | 126, 190, 303, 826, 1476, 1548 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1142 |
| Bsp19I | CCATGG | 1 cut(s) | 941 |
| BspACI | CCGC | 2 cut(s) | 1435, 1467 |
| BspANI | GGCC | 2 cut(s) | 734, 1447 |
| BspCNI | CTCAG | 4 cut(s) | 59, 1244, 1344, 1408 |
| BspDI | ATCGAT | 1 cut(s) | 78 |
| BspFNI | CGCG | 2 cut(s) | 1437, 1586 |
| BspLI | GGNNCC | 4 cut(s) | 906, 1093, 1433, 1568 |
| BspMI | ACCTGC | 1 cut(s) | 467 |
| BspOI | GCTAGC | 2 cut(s) | 285, 1529 |
| BspPI | GGATC | 3 cut(s) | 134, 298, 821 |
| BspT104I | TTCGAA | 1 cut(s) | 797 |
| BsrDI | GCAATG | 3 cut(s) | 471, 776, 1008 |
| BsrI | ACTGG | 1 cut(s) | 1448 |
| BssECI | CCNNGG | 3 cut(s) | 941, 1147, 1148 |
| BssMI | GATC | 6 cut(s) | 126, 190, 303, 826, 1476, 1548 |
| BssT1I | CCWWGG | 1 cut(s) | 941 |
| Bst2UI | CCWGG | 3 cut(s) | 139, 632, 1149 |
| Bst4CI | ACNGT | 5 cut(s) | 86, 313, 560, 839, 1208 |
| BstBI | TTCGAA | 1 cut(s) | 797 |
| BstC8I | GCNNGC | 4 cut(s) | 43, 283, 1053, 1527 |
| BstDEI | CTNAG | 8 cut(s) | 46, 962, 1142, 1231, 1331, 1395, 1427, 1598 |
| BstDSI | CCRYGG | 1 cut(s) | 941 |
| BstF5I | GGATG | 5 cut(s) | 231, 755, 829, 937, 1171 |
| BstFNI | CGCG | 2 cut(s) | 1437, 1586 |
| BstHHI | GCGC | 3 cut(s) | 971, 986, 1279 |
| BstKTI | GATC | 6 cut(s) | 129, 193, 306, 829, 1479, 1551 |
| BstMAI | GTCTC | 3 cut(s) | 1459, 1545, 1628 |
| BstMBI | GATC | 6 cut(s) | 126, 190, 303, 826, 1476, 1548 |
| BstMCI | CGRYCG | 1 cut(s) | 193 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 299, 1274, 1535 |
| BstNI | CCWGG | 3 cut(s) | 139, 632, 1149 |
| BstSCI | CCNGG | 4 cut(s) | 137, 507, 630, 1147 |
| BstSFI | CTRYAG | 3 cut(s) | 372, 852, 1190 |
| BstUI | CGCG | 2 cut(s) | 1437, 1586 |
| BstV1I | GCAGC | 4 cut(s) | 998, 1046, 1190, 1231 |
| BstV2I | GAAGAC | 1 cut(s) | 699 |
| Bsu15I | ATCGAT | 1 cut(s) | 78 |
| BsuI | GTATCC | 1 cut(s) | 836 |
| BsuRI | GGCC | 2 cut(s) | 734, 1447 |
| BsuTUI | ATCGAT | 1 cut(s) | 78 |
| BtgI | CCRYGG | 1 cut(s) | 941 |
| BtgZI | GCGATG | 1 cut(s) | 527 |
| BtsCI | GGATG | 5 cut(s) | 231, 755, 829, 937, 1171 |
| BtsI | GCAGTG | 3 cut(s) | 129, 603, 979 |
| BtsIMutI | CAGTG | 4 cut(s) | 129, 603, 844, 979 |
| BveI | ACCTGC | 1 cut(s) | 467 |
| Cac8I | GCNNGC | 4 cut(s) | 43, 283, 1053, 1527 |
| CfoI | GCGC | 3 cut(s) | 971, 986, 1279 |
| Cfr13I | GGNCC | 1 cut(s) | 917 |
| ClaI | ATCGAT | 1 cut(s) | 78 |
| CseI | GACGC | 3 cut(s) | 287, 1441, 1527 |
| Csp6I | GTAC | 1 cut(s) | 763 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 946, 981 |
| CviAII | CATG | 5 cut(s) | 914, 942, 991, 997, 1007 |
| CviQI | GTAC | 1 cut(s) | 763 |
| DdeI | CTNAG | 8 cut(s) | 46, 962, 1142, 1231, 1331, 1395, 1427, 1598 |
| DpnI | GATC | 6 cut(s) | 128, 192, 305, 828, 1478, 1550 |
| DpnII | GATC | 6 cut(s) | 126, 190, 303, 826, 1476, 1548 |
| DraIII | CACNNNGTG | 1 cut(s) | 275 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1309 |
| EaeI | YGGCCR | 2 cut(s) | 732, 1445 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1309 |
| Eco130I | CCWWGG | 1 cut(s) | 941 |
| Eco32I | GATATC | 1 cut(s) | 1407 |
| Eco47I | GGWCC | 1 cut(s) | 917 |
| Eco57I | CTGAAG | 1 cut(s) | 1290 |
| EcoRII | CCWGG | 3 cut(s) | 137, 630, 1147 |
| EcoRV | GATATC | 1 cut(s) | 1407 |
| EcoT14I | CCWWGG | 1 cut(s) | 941 |
| EcoT22I | ATGCAT | 2 cut(s) | 535, 1008 |
| ErhI | CCWWGG | 1 cut(s) | 941 |
| Esp3I | CGTCTC | 2 cut(s) | 1459, 1545 |
| FaeI | CATG | 5 cut(s) | 917, 945, 994, 1000, 1010 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1039, 1071, 1441, 1473 |
| FaqI | GGGAC | 1 cut(s) | 1358 |
| FatI | CATG | 5 cut(s) | 913, 941, 990, 996, 1006 |
| FbaI | TGATCA | 1 cut(s) | 1476 |
| Fnu4HI | GCNGC | 4 cut(s) | 1012, 1035, 1179, 1245 |
| FokI | GGATG | 5 cut(s) | 238, 762, 836, 924, 1178 |
| Fsp4HI | GCNGC | 4 cut(s) | 1012, 1035, 1179, 1245 |
| FspBI | CTAG | 6 cut(s) | 15, 282, 414, 588, 707, 1526 |
| GlaI | GCGC | 3 cut(s) | 970, 985, 1278 |
| GluI | GCNGC | 4 cut(s) | 1012, 1035, 1179, 1245 |
| GsaI | CCCAGC | 1 cut(s) | 1243 |
| GsuI | CTGGAG | 4 cut(s) | 411, 453, 708, 1023 |
| HaeIII | GGCC | 2 cut(s) | 734, 1447 |
| HapII | CCGG | 2 cut(s) | 100, 509 |
| HgaI | GACGC | 3 cut(s) | 287, 1441, 1527 |
| HhaI | GCGC | 3 cut(s) | 971, 986, 1279 |
| Hin1II | CATG | 5 cut(s) | 917, 945, 994, 1000, 1010 |
| Hin6I | GCGC | 3 cut(s) | 969, 984, 1277 |
| HinP1I | GCGC | 3 cut(s) | 969, 984, 1277 |
| HincII | GTYRAC | 3 cut(s) | 552, 1228, 1582 |
| HindII | GTYRAC | 3 cut(s) | 552, 1228, 1582 |
| HindIII | AAGCTT | 3 cut(s) | 39, 144, 816 |
| HpaI | GTTAAC | 1 cut(s) | 1582 |
| HpaII | CCGG | 2 cut(s) | 100, 509 |
| Hpy166II | GTNNAC | 5 cut(s) | 205, 552, 661, 1228, 1582 |
| Hpy188III | TCNNGA | 7 cut(s) | 33, 576, 588, 1040, 1064, 1102, 1292 |
| Hpy8I | GTNNAC | 5 cut(s) | 205, 552, 661, 1228, 1582 |
| Hpy99I | CGWCG | 5 cut(s) | 90, 125, 198, 323, 1310 |
| HpyAV | CCTTC | 4 cut(s) | 740, 804, 1082, 1225 |
| HpyCH4III | ACNGT | 5 cut(s) | 86, 313, 560, 839, 1208 |
| HpyCH4IV | ACGT | 2 cut(s) | 954, 1155 |
| HpyCH4V | TGCA | 8 cut(s) | 476, 488, 533, 769, 896, 1006, 1014, 1562 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 299, 1274, 1535 |
| HpyF3I | CTNAG | 8 cut(s) | 46, 962, 1142, 1231, 1331, 1395, 1427, 1598 |
| HpySE526I | ACGT | 2 cut(s) | 954, 1155 |
| Hsp92II | CATG | 5 cut(s) | 917, 945, 994, 1000, 1010 |
| HspAI | GCGC | 3 cut(s) | 969, 984, 1277 |
| Ksp22I | TGATCA | 1 cut(s) | 1476 |
| KspAI | GTTAAC | 1 cut(s) | 1582 |
| Kzo9I | GATC | 6 cut(s) | 126, 190, 303, 826, 1476, 1548 |
| LmnI | GCTCC | 6 cut(s) | 122, 341, 904, 1042, 1091, 1572 |
| Lsp1109I | GCAGC | 4 cut(s) | 998, 1046, 1190, 1231 |
| LweI | GCATC | 1 cut(s) | 1413 |
| MaeI | CTAG | 6 cut(s) | 15, 282, 414, 588, 707, 1526 |
| MaeII | ACGT | 2 cut(s) | 954, 1155 |
| MaeIII | GTNAC | 2 cut(s) | 275, 1208 |
| MalI | GATC | 6 cut(s) | 128, 192, 305, 828, 1478, 1550 |
| MboI | GATC | 6 cut(s) | 126, 190, 303, 826, 1476, 1548 |
| MboII | GAAGA | 5 cut(s) | 455, 704, 811, 887, 1283 |
| MlsI | TGGCCA | 2 cut(s) | 734, 1447 |
| MluCI | AATT | 5 cut(s) | 167, 437, 718, 736, 1026 |
| MluI | ACGCGT | 1 cut(s) | 1584 |
| MluNI | TGGCCA | 2 cut(s) | 734, 1447 |
| MlyI | GAGTC | 2 cut(s) | 411, 1319 |
| MmeI | TCCRAC | 3 cut(s) | 144, 176, 1060 |
| MnlI | CCTC | 9 cut(s) | 386, 707, 780, 918, 1098, 1177, 1340, 1371, 1585 |
| Mox20I | TGGCCA | 2 cut(s) | 734, 1447 |
| Mph1103I | ATGCAT | 2 cut(s) | 535, 1008 |
| MroXI | GAANNNNTTC | 1 cut(s) | 24 |
| MscI | TGGCCA | 2 cut(s) | 734, 1447 |
| MseI | TTAA | 6 cut(s) | 216, 261, 363, 714, 756, 1581 |
| MslI | CAYNNNNRTG | 2 cut(s) | 995, 1001 |
| Msp20I | TGGCCA | 2 cut(s) | 734, 1447 |
| MspA1I | CMGCKG | 1 cut(s) | 431 |
| MspI | CCGG | 2 cut(s) | 100, 509 |
| MspR9I | CCNGG | 4 cut(s) | 139, 509, 632, 1149 |
| Mva1269I | GAATGC | 2 cut(s) | 533, 1014 |
| MvaI | CCWGG | 3 cut(s) | 139, 632, 1149 |
| MvnI | CGCG | 2 cut(s) | 1437, 1586 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 299, 1274, 1535 |
| NciI | CCSGG | 1 cut(s) | 509 |
| NcoI | CCATGG | 1 cut(s) | 941 |
| NdeII | GATC | 6 cut(s) | 126, 190, 303, 826, 1476, 1548 |
| NheI | GCTAGC | 2 cut(s) | 281, 1525 |
| NlaIII | CATG | 5 cut(s) | 917, 945, 994, 1000, 1010 |
| NlaIV | GGNNCC | 4 cut(s) | 906, 1093, 1433, 1568 |
| NmuCI | GTSAC | 1 cut(s) | 275 |
| NsiI | ATGCAT | 2 cut(s) | 535, 1008 |
| NspV | TTCGAA | 1 cut(s) | 797 |
| PasI | CCCWGGG | 1 cut(s) | 1148 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 190 |
| PctI | GAATGC | 2 cut(s) | 533, 1014 |
| PdmI | GAANNNNTTC | 1 cut(s) | 24 |
| PfeI | GAWTC | 9 cut(s) | 57, 65, 790, 802, 878, 1321, 1372, 1391, 1490 |
| PfoI | TCCNGGA | 1 cut(s) | 137 |
| PkrI | GCNGC | 4 cut(s) | 1013, 1036, 1180, 1246 |
| Ple19I | CGATCG | 1 cut(s) | 193 |
| PleI | GAGTC | 2 cut(s) | 411, 1318 |
| PpsI | GAGTC | 2 cut(s) | 411, 1318 |
| Psp1406I | AACGTT | 1 cut(s) | 1155 |
| Psp6I | CCWGG | 3 cut(s) | 137, 630, 1147 |
| PspFI | CCCAGC | 1 cut(s) | 1239 |
| PspGI | CCWGG | 3 cut(s) | 137, 630, 1147 |
| PspN4I | GGNNCC | 4 cut(s) | 906, 1093, 1433, 1568 |
| PspPI | GGNCC | 1 cut(s) | 917 |
| PvuI | CGATCG | 1 cut(s) | 193 |
| PvuII | CAGCTG | 1 cut(s) | 431 |
| RsaI | GTAC | 1 cut(s) | 764 |
| RsaNI | GTAC | 1 cut(s) | 763 |
| RseI | CAYNNNNRTG | 2 cut(s) | 995, 1001 |
| SaqAI | TTAA | 6 cut(s) | 216, 261, 363, 714, 756, 1581 |
| SatI | GCNGC | 4 cut(s) | 1012, 1035, 1179, 1245 |
| Sau3AI | GATC | 6 cut(s) | 126, 190, 303, 826, 1476, 1548 |
| Sau96I | GGNCC | 1 cut(s) | 917 |
| SchI | GAGTC | 2 cut(s) | 411, 1319 |
| ScrFI | CCNGG | 4 cut(s) | 139, 509, 632, 1149 |
| SfaNI | GCATC | 1 cut(s) | 1413 |
| SfcI | CTRYAG | 3 cut(s) | 372, 852, 1190 |
| SfuI | TTCGAA | 1 cut(s) | 797 |
| SinI | GGWCC | 1 cut(s) | 917 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 995, 1001 |
| SmlI | CTYRAG | 2 cut(s) | 1102, 1160 |
| SmoI | CTYRAG | 2 cut(s) | 1102, 1160 |
| SpeI | ACTAGT | 1 cut(s) | 706 |
| Sse9I | AATT | 5 cut(s) | 167, 437, 718, 736, 1026 |
| SsiI | CCGC | 2 cut(s) | 1435, 1467 |
| SspI | AATATT | 1 cut(s) | 1576 |
| SspMI | CTAG | 6 cut(s) | 15, 282, 414, 588, 707, 1526 |
| StyD4I | CCNGG | 4 cut(s) | 137, 507, 630, 1147 |
| StyI | CCWWGG | 1 cut(s) | 941 |
| TaaI | ACNGT | 5 cut(s) | 86, 313, 560, 839, 1208 |
| TaiI | ACGT | 2 cut(s) | 957, 1158 |
| TaqI | TCGA | 4 cut(s) | 34, 78, 797, 1551 |
| TasI | AATT | 5 cut(s) | 167, 437, 718, 736, 1026 |
| TfiI | GAWTC | 9 cut(s) | 57, 65, 790, 802, 878, 1321, 1372, 1391, 1490 |
| Tru1I | TTAA | 6 cut(s) | 216, 261, 363, 714, 756, 1581 |
| Tru9I | TTAA | 6 cut(s) | 216, 261, 363, 714, 756, 1581 |
| TscAI | CASTG | 4 cut(s) | 136, 610, 844, 986 |
| TseFI | GTSAC | 1 cut(s) | 275 |
| TseI | GCWGC | 4 cut(s) | 1011, 1034, 1178, 1244 |
| Tsp45I | GTSAC | 1 cut(s) | 275 |
| TspDTI | ATGAA | 8 cut(s) | 460, 530, 540, 979, 1211, 1265, 1450, 1518 |
| TspGWI | ACGGA | 2 cut(s) | 202, 263 |
| TspRI | CASTG | 4 cut(s) | 136, 610, 844, 986 |
| VpaK11BI | GGWCC | 1 cut(s) | 917 |
| XapI | RAATTY | 3 cut(s) | 437, 718, 1026 |
| XbaI | TCTAGA | 1 cut(s) | 587 |
| XmnI | GAANNNNTTC | 1 cut(s) | 24 |
| XspI | CTAG | 6 cut(s) | 15, 282, 414, 588, 707, 1526 |
| Zsp2I | ATGCAT | 2 cut(s) | 535, 1008 |