Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0007132

Physical Location & Seq

Genomic Coordinates Forward (+)

56500893 .. 56503723

Gene Structure 2831 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G029820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGGCGGCCAAAATTGGGTCGTTCCGGCACAGCTTCGCGGAGAGGAGCAAGGAGAGGCTGCTCTCACGAAAAGGGTACTCGGATTTCGGGCTCAACAGCTCCGAATGCGGCGATGAGAGAGTGAAATGCGGCTGGTTTGGGAGAATGTCCGATGGGTTGGTCAACTTGTGCAACAGCGTTCAGGAGGTTTCGGTTAAACTGTATCAAATGGGCCGCTCCGATCCTCGGAAAGCTTACTTCGCCGCCAAGATGGGCTTGTCGCTGGCGATTGTGTCACTGCTCATATTTTTCAAGGAGCCCCTCAAAGATGCTAGCCAATATTCCATCTGGGCGATTCTCACCGTTGTCGTCGTTTTCGAATTCAGCATAGGTGCGACGTTGAACAAAGGGTTTAATCGTGCTTTGGGGACAATTTCGGCTGGAGGGCTAGCTCTAGGTATAGCAGAGTTGGCTGTAATGGCCGGAAGTTGGCAGGAGGTTGTGATTGTAGTCAATATTTTCATAGCAGGTTTTCTTGCTAGCTATATCAAGCTTTATCCGCCAATGAAGACTTATGAATACGGATTTCGGGTGTTCTTGTTGACCTACTGTATAGTTTTGGTATCCGGGAGTACATCATCATTTTTCGGAACAGCAATTTATCGATTGATACTTATTGGAGTGGGTGCTGCTGTCTGTTTGGTCATAAACATATGCATACTTCCCATCTGGGCAGGGGAGGATCTCCACAAGCTGGTGGTGAAAAATTTCAAGGGTGTTGCTACTTCTTTGGAAGGTGTTGTTAATGGATATCTGCAATGTGTTGAGTACGAGAGAATTCCTTCGAAAATTCTCACATACCAAGCTTCTGATGAACCATTGTATAATGGATATAGAGCCACTATACAATCTTCAACCCAAGAGGAAACCCTGTTAGACTTTGCACTATGGGAGCCACCACATGGCCCTTATAGGTCATTCCATTATCCTTGGAGAAATTATGTCAGAGTTGGTGGTTCTCTGAGGCACTGTGCATTCATGGTCATGGCAATGCATGGATGCATTCTTTCAGAAATTCAGGCGCCACCAGAAAAGAGACAGGTTTTTGCAGATGAGCTCCTGAGAGTTGGTACTGAAGGTGCTAAAGTATTACGTGAGCTAGGAAGCAAAGTAGAAAGGATGGAAAAATTAAGTCCCAAAGACATACTTTTTGAAGTTCATGAAGCAGCAGAAGACTTGCAGAATAAGATAGACCAGAAGTCGTACCTTCTTGTCAATTATGAAGGCTGGGGACCCGAAATACTAGGGCGCAAATTTGAAGATCCTGAGCAGGATACTAGGAACAATGTGATTGAGTCCCTTAGTGAATCGTGGGATGCTCAGAATATTGGAAGCGGCGGTGATCCTTCAATGTCACAATGGATATCTACAGATAGCGTGTTAAAGAAAACATTAACAGCATGGCCCTCACGCCTTACATCGTTCACTGGGAATCTTATGCAACCTCAACCTGAACTAGAAGAATCAAAAGTATATGAAAGCGCGAGCTCCTTATCTTTAGCAACATTTACTTCGCTTCTGATTGAGTTTGTGGCAAGGCTTCAAAATCTAGTGGATGAATTTGTAGAGCTTAGTGAGAAAGCAAACTTTAAGGATCCTATGGACGTATCGGATACCAAAGAGGTAGGCGGGTTCTGGACCAGAATATATAGGCGCTGGCGGTCCAAGAATGATGAGTTAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005216 GO:0005253 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0008150 GO:0008509 GO:0008514 GO:0009705 GO:0009987 GO:0010118 GO:0015075 GO:0015103 GO:0015140 GO:0015267 GO:0015318 GO:0015556 GO:0015698 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0022803 GO:0022838 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071423 GO:0071702 GO:0090332 GO:0098588 GO:0098656 GO:0098805 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALMT

Protein Analysis

574

Amino Acids

64.28

Weight (kDa)

5.85

Isoelectric Point (pI)

40.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALMT	PF11744	69 - 538	2.8e-178	Aluminium activated malate transporter
FUSC_2	PF13515	106 - 229	1.4e-11	Fusaric acid resistance protein-like
FUSC	PF04632	110 - 263	2.6e-07	Fusaric acid resistance protein family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007132)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25480
fragaria_vesca	FvH4_4g27691 FvH4_4g27693 FvH4_4g27693 FvH4_4g27693 FvH4_4g27693 FvH4_4g27693 FvH4_4g27693
malus_domestica	MD13G1044400.v1.1
prunus_persica	Prupe.1G308100_v2.0.a1
pyrus_communis	pycom13g03900 pycom16g03980
rosa_chinensis	RchiOBHm_Chr4g0435551
rosa_laevigata	RLG00000006583
rosa_multiflora	Rmu_sc0001940.1_g000036
rosa_roxburghii	Rroxscaffold_5G00376780
rosa_rugosa	Rorug04G0286100 Rorug04G0286200 Rorug04G0286300 Rorug04G0286400
rosa_samantha	Rh4AG341900 Rh4BG350100 Rh4CG364800 Rh4DG344400
rosa_wichuraiana	Rw4G029820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	497
AccB1I	GGYRCC	1 cut(s)	1060
AccB7I	CCANNNNNTGG	2 cut(s)	733, 941
AccBSI	CCGCTC	1 cut(s)	216
AccII	CGCG	2 cut(s)	38, 1523
AclWI	GGATC	6 cut(s)	215, 729, 1295, 1376, 1628, 1641
AcoI	YGGCCR	2 cut(s)	6, 459
AcsI	RAATTY	7 cut(s)	359, 745, 816, 828, 1053, 1292, 1598
AcuI	CTGAAG	1 cut(s)	1134
AcyI	GRCGYC	1 cut(s)	1061
AfaI	GTAC	5 cut(s)	77, 613, 809, 1111, 1244
AfiI	CCNNNNNNNGG	5 cut(s)	15, 225, 468, 733, 941
AgsI	TTSAA	8 cut(s)	292, 382, 751, 894, 1193, 1298, 1389, 1583
AhdI	GACNNNNNGTC	1 cut(s)	1237
Alw21I	GWGCWC	2 cut(s)	1098, 1529
Alw26I	GTCTC	1 cut(s)	1069
AlwI	GGATC	6 cut(s)	215, 729, 1295, 1376, 1628, 1641
AoxI	GGCC	5 cut(s)	6, 211, 459, 943, 1442
ApeKI	GCWGC	3 cut(s)	58, 668, 1205
ApoI	RAATTY	7 cut(s)	359, 745, 816, 828, 1053, 1292, 1598
ArsI	GACNNNNNNTTYG	2 cut(s)	1172, 1204
Asp700I	GAANNNNTTC	2 cut(s)	746, 820
AspLEI	GCGC	4 cut(s)	1063, 1290, 1523, 1695
AspS9I	GGNCC	6 cut(s)	211, 944, 1271, 1443, 1677, 1701
AsuC2I	CCSGG	1 cut(s)	607
AsuHPI	GGTGA	3 cut(s)	331, 751, 1391
AsuII	TTCGAA	2 cut(s)	357, 824
AsuNHI	GCTAGC	3 cut(s)	311, 427, 518
AvaII	GGWCC	3 cut(s)	1271, 1677, 1701
BamHI	GGATCC	1 cut(s)	1633
BanI	GGYRCC	1 cut(s)	1060
BanII	GRGCYC	4 cut(s)	93, 300, 1098, 1529
BbsI	GAAGAC	2 cut(s)	554, 1218
Bbv12I	GWGCWC	2 cut(s)	1098, 1529
BbvI	GCAGC	3 cut(s)	45, 655, 1217
BccI	CCATC	5 cut(s)	146, 244, 332, 713, 1153
BciVI	GTATCC	3 cut(s)	613, 1306, 1645
BcnI	CCSGG	1 cut(s)	607
BcoDI	GTCTC	1 cut(s)	1069
BfaI	CTAG	9 cut(s)	312, 428, 434, 519, 1139, 1283, 1317, 1496, 1589
BfmI	CTRYAG	1 cut(s)	1407
BfoI	RGCGCY	2 cut(s)	1064, 1696
BfuAI	ACCTGC	1 cut(s)	497
BfuI	GTATCC	3 cut(s)	613, 1306, 1645
BisI	GCNGC	9 cut(s)	6, 59, 109, 130, 214, 243, 669, 1206, 1375
BlsI	GCNGC	9 cut(s)	7, 60, 110, 131, 215, 244, 670, 1207, 1376
Bme1390I	CCNGG	1 cut(s)	607
Bme18I	GGWCC	3 cut(s)	1271, 1677, 1701
BmeRI	GACNNNNNGTC	1 cut(s)	1237
BmgT120I	GGNCC	6 cut(s)	211, 944, 1271, 1443, 1677, 1701
BmiI	GGNNCC	6 cut(s)	297, 933, 1062, 1272, 1273, 1635
BmrFI	CCNGG	1 cut(s)	607
BmrI	ACTGGG	1 cut(s)	1476
BmsI	GCATC	3 cut(s)	298, 1028, 1345
BmtI	GCTAGC	3 cut(s)	315, 431, 522
BmuI	ACTGGG	1 cut(s)	1476
BpiI	GAAGAC	2 cut(s)	554, 1218
BpmI	CTGGAG	1 cut(s)	441
Bpu10I	CCTNAGC	1 cut(s)	1305
Bpu14I	TTCGAA	2 cut(s)	357, 824
BpuMI	CCSGG	1 cut(s)	607
Bsa29I	ATCGAT	1 cut(s)	643
BsaAI	YACGTR	1 cut(s)	1133
BsaHI	GRCGYC	1 cut(s)	1061
BsaJI	CCNNGG	2 cut(s)	224, 968
Bsc4I	CCNNNNNNNGG	5 cut(s)	15, 225, 468, 733, 941
Bse1I	ACTGG	1 cut(s)	1471
Bse3DI	GCAATG	2 cut(s)	803, 1035
BseCI	ATCGAT	1 cut(s)	643
BseDI	CCNNGG	2 cut(s)	224, 968
BseGI	GGATG	4 cut(s)	1043, 1164, 1360, 1600
BseLI	CCNNNNNNNGG	5 cut(s)	15, 225, 468, 733, 941
BseMI	GCAATG	2 cut(s)	803, 1035
BseMII	CTCAG	4 cut(s)	992, 1091, 1296, 1373
BseNI	ACTGG	1 cut(s)	1471
BseRI	GAGGAG	1 cut(s)	58
BseXI	GCAGC	3 cut(s)	45, 655, 1217
BseYI	CCCAGC	1 cut(s)	1266
Bsh1236I	CGCG	2 cut(s)	38, 1523
BshFI	GGCC	5 cut(s)	8, 213, 461, 945, 1444
BshNI	GGYRCC	1 cut(s)	1060
BshVI	ATCGAT	1 cut(s)	643
BsiHKAI	GWGCWC	2 cut(s)	1098, 1529
BsiSI	CCGG	3 cut(s)	25, 462, 606
BslFI	GGGAC	4 cut(s)	421, 1158, 1284, 1321
BslI	CCNNNNNNNGG	5 cut(s)	15, 225, 468, 733, 941
BsmAI	GTCTC	1 cut(s)	1069
BsmFI	GGGAC	4 cut(s)	421, 1158, 1284, 1321
BsmI	GAATGC	3 cut(s)	110, 1013, 1041
BsnI	GGCC	5 cut(s)	8, 213, 461, 945, 1444
Bsp119I	TTCGAA	2 cut(s)	357, 824
Bsp1286I	GDGCHC	4 cut(s)	93, 300, 1098, 1529
Bsp143I	GATC	5 cut(s)	220, 721, 1300, 1381, 1633
BspANI	GGCC	5 cut(s)	8, 213, 461, 945, 1444
BspCNI	CTCAG	4 cut(s)	993, 1092, 1297, 1372
BspDI	ATCGAT	1 cut(s)	643
BspFNI	CGCG	2 cut(s)	38, 1523
BspHI	TCATGA	1 cut(s)	1198
BspLI	GGNNCC	6 cut(s)	297, 933, 1062, 1272, 1273, 1635
BspMI	ACCTGC	1 cut(s)	497
BspOI	GCTAGC	3 cut(s)	315, 431, 522
BspPI	GGATC	6 cut(s)	215, 729, 1295, 1376, 1628, 1641
BspT104I	TTCGAA	2 cut(s)	357, 824
BspT107I	GGYRCC	1 cut(s)	1060
BsrBI	CCGCTC	1 cut(s)	216
BsrDI	GCAATG	2 cut(s)	803, 1035
BsrI	ACTGG	1 cut(s)	1471
BssECI	CCNNGG	2 cut(s)	224, 968
BssMI	GATC	5 cut(s)	220, 721, 1300, 1381, 1633
BssNI	GRCGYC	1 cut(s)	1061
BssT1I	CCWWGG	1 cut(s)	968
Bst4CI	ACNGT	4 cut(s)	201, 343, 590, 1010
BstACI	GRCGYC	1 cut(s)	1061
BstBAI	YACGTR	1 cut(s)	1133
BstBI	TTCGAA	2 cut(s)	357, 824
BstC8I	GCNNGC	6 cut(s)	264, 313, 429, 520, 1525, 1697
BstDEI	CTNAG	6 cut(s)	1001, 1100, 1305, 1340, 1359, 1610
BstF5I	GGATG	4 cut(s)	1043, 1164, 1360, 1600
BstFNI	CGCG	2 cut(s)	38, 1523
BstH2I	RGCGCY	2 cut(s)	1064, 1696
BstHHI	GCGC	4 cut(s)	1063, 1290, 1523, 1695
BstKTI	GATC	5 cut(s)	223, 724, 1303, 1384, 1636
BstMAI	GTCTC	1 cut(s)	1069
BstMBI	GATC	5 cut(s)	220, 721, 1300, 1381, 1633
BstMWI	GCNNNNNNNGC	5 cut(s)	105, 239, 449, 458, 538
BstSCI	CCNGG	1 cut(s)	605
BstSFI	CTRYAG	1 cut(s)	1407
BstUI	CGCG	2 cut(s)	38, 1523
BstV1I	GCAGC	3 cut(s)	45, 655, 1217
BstV2I	GAAGAC	2 cut(s)	554, 1218
BstX2I	RGATCY	3 cut(s)	721, 1300, 1633
BstYI	RGATCY	3 cut(s)	721, 1300, 1633
Bsu15I	ATCGAT	1 cut(s)	643
BsuI	GTATCC	3 cut(s)	613, 1306, 1645
BsuRI	GGCC	5 cut(s)	8, 213, 461, 945, 1444
BsuTUI	ATCGAT	1 cut(s)	643
BtgZI	GCGATG	1 cut(s)	126
BtsCI	GGATG	4 cut(s)	1043, 1164, 1360, 1600
BtsI	GCAGTG	1 cut(s)	275
BtsIMutI	CAGTG	3 cut(s)	275, 1006, 1464
BveI	ACCTGC	1 cut(s)	497
Cac8I	GCNNGC	6 cut(s)	264, 313, 429, 520, 1525, 1697
CciI	TCATGA	1 cut(s)	1198
CfoI	GCGC	4 cut(s)	1063, 1290, 1523, 1695
Cfr13I	GGNCC	6 cut(s)	211, 944, 1271, 1443, 1677, 1701
ClaI	ATCGAT	1 cut(s)	643
Csp6I	GTAC	5 cut(s)	76, 612, 808, 1110, 1243
CviAII	CATG	6 cut(s)	941, 1018, 1024, 1034, 1199, 1440
CviQI	GTAC	5 cut(s)	76, 612, 808, 1110, 1243
DdeI	CTNAG	6 cut(s)	1001, 1100, 1305, 1340, 1359, 1610
DinI	GGCGCC	1 cut(s)	1062
DpnI	GATC	5 cut(s)	222, 723, 1302, 1383, 1635
DpnII	GATC	5 cut(s)	220, 721, 1300, 1381, 1633
DriI	GACNNNNNGTC	1 cut(s)	1237
EaeI	YGGCCR	2 cut(s)	6, 459
Eam1105I	GACNNNNNGTC	1 cut(s)	1237
EciI	GGCGGA	1 cut(s)	528
Ecl136II	GAGCTC	2 cut(s)	1096, 1527
Eco130I	CCWWGG	1 cut(s)	968
Eco24I	GRGCYC	4 cut(s)	93, 300, 1098, 1529
Eco32I	GATATC	2 cut(s)	791, 1404
Eco47I	GGWCC	3 cut(s)	1271, 1677, 1701
Eco53kI	GAGCTC	2 cut(s)	1096, 1527
Eco57I	CTGAAG	1 cut(s)	1134
EcoICRI	GAGCTC	2 cut(s)	1096, 1527
EcoO109I	RGGNCCY	1 cut(s)	1271
EcoRI	GAATTC	2 cut(s)	359, 816
EcoRV	GATATC	2 cut(s)	791, 1404
EcoT14I	CCWWGG	1 cut(s)	968
EcoT22I	ATGCAT	3 cut(s)	698, 1035, 1043
EcoT38I	GRGCYC	4 cut(s)	93, 300, 1098, 1529
EgeI	GGCGCC	1 cut(s)	1062
EheI	GGCGCC	1 cut(s)	1062
ErhI	CCWWGG	1 cut(s)	968
FaeI	CATG	6 cut(s)	944, 1021, 1027, 1037, 1202, 1443
FalI	AAGNNNNNCTT	4 cut(s)	239, 271, 1170, 1202
FaqI	GGGAC	4 cut(s)	421, 1158, 1284, 1321
FatI	CATG	6 cut(s)	940, 1017, 1023, 1033, 1198, 1439
FauI	CCCGC	1 cut(s)	1661
FauNDI	CATATG	1 cut(s)	692
Fnu4HI	GCNGC	9 cut(s)	6, 59, 109, 130, 214, 243, 669, 1206, 1375
FokI	GGATG	4 cut(s)	1050, 1171, 1367, 1607
FriOI	GRGCYC	4 cut(s)	93, 300, 1098, 1529
Fsp4HI	GCNGC	9 cut(s)	6, 59, 109, 130, 214, 243, 669, 1206, 1375
FspBI	CTAG	9 cut(s)	312, 428, 434, 519, 1139, 1283, 1317, 1496, 1589
GlaI	GCGC	4 cut(s)	1062, 1289, 1522, 1694
GluI	GCNGC	9 cut(s)	6, 59, 109, 130, 214, 243, 669, 1206, 1375
GsaI	CCCAGC	1 cut(s)	1270
GsuI	CTGGAG	1 cut(s)	441
HaeII	RGCGCY	2 cut(s)	1064, 1696
HaeIII	GGCC	5 cut(s)	8, 213, 461, 945, 1444
HapII	CCGG	3 cut(s)	25, 462, 606
HhaI	GCGC	4 cut(s)	1063, 1290, 1523, 1695
Hin1I	GRCGYC	1 cut(s)	1061
Hin1II	CATG	6 cut(s)	944, 1021, 1027, 1037, 1202, 1443
Hin6I	GCGC	4 cut(s)	1061, 1288, 1521, 1693
HinP1I	GCGC	4 cut(s)	1061, 1288, 1521, 1693
HincII	GTYRAC	2 cut(s)	163, 582
HindII	GTYRAC	2 cut(s)	163, 582
HindIII	AAGCTT	3 cut(s)	231, 530, 843
HinfI	GANTC	5 cut(s)	334, 1334, 1346, 1471, 1502
HpaII	CCGG	3 cut(s)	25, 462, 606
HphI	GGTGA	3 cut(s)	331, 751, 1391
Hpy166II	GTNNAC	3 cut(s)	163, 582, 1464
Hpy188III	TCNNGA	6 cut(s)	66, 182, 1099, 1199, 1304, 1675
Hpy8I	GTNNAC	3 cut(s)	163, 582, 1464
Hpy99I	CGWCG	2 cut(s)	353, 379
HpyAV	CCTTC	6 cut(s)	767, 831, 1109, 1256, 1256, 1395
HpyCH4III	ACNGT	4 cut(s)	201, 343, 590, 1010
HpyCH4IV	ACGT	3 cut(s)	377, 1132, 1644
HpyF10VI	GCNNNNNNNGC	5 cut(s)	105, 239, 449, 458, 538
HpyF3I	CTNAG	6 cut(s)	1001, 1100, 1305, 1340, 1359, 1610
HpySE526I	ACGT	3 cut(s)	377, 1132, 1644
Hsp92I	GRCGYC	1 cut(s)	1061
Hsp92II	CATG	6 cut(s)	944, 1021, 1027, 1037, 1202, 1443
HspAI	GCGC	4 cut(s)	1061, 1288, 1521, 1693
KasI	GGCGCC	1 cut(s)	1060
KflI	GGGWCCC	1 cut(s)	1271
Kzo9I	GATC	5 cut(s)	220, 721, 1300, 1381, 1633
LmnI	GCTCC	7 cut(s)	45, 104, 221, 295, 931, 1101, 1532
Lsp1109I	GCAGC	3 cut(s)	45, 655, 1217
LweI	GCATC	3 cut(s)	298, 1028, 1345
MaeI	CTAG	9 cut(s)	312, 428, 434, 519, 1139, 1283, 1317, 1496, 1589
MaeII	ACGT	3 cut(s)	377, 1132, 1644
MaeIII	GTNAC	2 cut(s)	273, 1392
MalI	GATC	5 cut(s)	222, 723, 1302, 1383, 1635
MbiI	CCGCTC	1 cut(s)	216
MboI	GATC	5 cut(s)	220, 721, 1300, 1381, 1633
MboII	GAAGA	5 cut(s)	559, 882, 1223, 1310, 1511
MflI	RGATCY	3 cut(s)	721, 1300, 1633
MhlI	GDGCHC	4 cut(s)	93, 300, 1098, 1529
Mly113I	GGCGCC	1 cut(s)	1061
MlyI	GAGTC	1 cut(s)	1343
Mph1103I	ATGCAT	3 cut(s)	698, 1035, 1043
MroXI	GAANNNNTTC	2 cut(s)	746, 820
MseI	TTAA	7 cut(s)	195, 393, 783, 1169, 1421, 1433, 1629
MslI	CAYNNNNRTG	2 cut(s)	1022, 1028
MspI	CCGG	3 cut(s)	25, 462, 606
MspR9I	CCNGG	1 cut(s)	607
Mva1269I	GAATGC	3 cut(s)	110, 1013, 1041
MvnI	CGCG	2 cut(s)	38, 1523
MwoI	GCNNNNNNNGC	5 cut(s)	105, 239, 449, 458, 538
NarI	GGCGCC	1 cut(s)	1061
NciI	CCSGG	1 cut(s)	607
NdeI	CATATG	1 cut(s)	692
NdeII	GATC	5 cut(s)	220, 721, 1300, 1381, 1633
NheI	GCTAGC	3 cut(s)	311, 427, 518
NlaIII	CATG	6 cut(s)	944, 1021, 1027, 1037, 1202, 1443
NlaIV	GGNNCC	6 cut(s)	297, 933, 1062, 1272, 1273, 1635
NmuCI	GTSAC	2 cut(s)	273, 1392
NsiI	ATGCAT	3 cut(s)	698, 1035, 1043
NspV	TTCGAA	2 cut(s)	357, 824
PagI	TCATGA	1 cut(s)	1198
PcsI	WCGNNNNNNNCGW	1 cut(s)	354
PctI	GAATGC	3 cut(s)	110, 1013, 1041
PdmI	GAANNNNTTC	2 cut(s)	746, 820
PfeI	GAWTC	4 cut(s)	334, 1346, 1471, 1502
PflMI	CCANNNNNTGG	2 cut(s)	733, 941
PfoI	TCCNGGA	1 cut(s)	605
PkrI	GCNGC	9 cut(s)	7, 60, 110, 131, 215, 244, 670, 1207, 1376
PleI	GAGTC	1 cut(s)	1342
PluTI	GGCGCC	1 cut(s)	1064
PpsI	GAGTC	1 cut(s)	1342
Ppu21I	YACGTR	1 cut(s)	1133
PpuMI	RGGWCCY	1 cut(s)	1271
Psp124BI	GAGCTC	2 cut(s)	1098, 1529
Psp5II	RGGWCCY	1 cut(s)	1271
PspFI	CCCAGC	1 cut(s)	1266
PspN4I	GGNNCC	6 cut(s)	297, 933, 1062, 1272, 1273, 1635
PspPI	GGNCC	6 cut(s)	211, 944, 1271, 1443, 1677, 1701
PspPPI	RGGWCCY	1 cut(s)	1271
PsuI	RGATCY	3 cut(s)	721, 1300, 1633
RsaI	GTAC	5 cut(s)	77, 613, 809, 1111, 1244
RsaNI	GTAC	5 cut(s)	76, 612, 808, 1110, 1243
RseI	CAYNNNNRTG	2 cut(s)	1022, 1028
SacI	GAGCTC	2 cut(s)	1098, 1529
SaqAI	TTAA	7 cut(s)	195, 393, 783, 1169, 1421, 1433, 1629
SatI	GCNGC	9 cut(s)	6, 59, 109, 130, 214, 243, 669, 1206, 1375
Sau3AI	GATC	5 cut(s)	220, 721, 1300, 1381, 1633
Sau96I	GGNCC	6 cut(s)	211, 944, 1271, 1443, 1677, 1701
SchI	GAGTC	1 cut(s)	1343
ScrFI	CCNGG	1 cut(s)	607
SduI	GDGCHC	4 cut(s)	93, 300, 1098, 1529
SfaNI	GCATC	3 cut(s)	298, 1028, 1345
SfcI	CTRYAG	1 cut(s)	1407
SfoI	GGCGCC	1 cut(s)	1062
SfuI	TTCGAA	2 cut(s)	357, 824
SinI	GGWCC	3 cut(s)	1271, 1677, 1701
SmiMI	CAYNNNNRTG	2 cut(s)	1022, 1028
SspDI	GGCGCC	1 cut(s)	1060
SspI	AATATT	3 cut(s)	320, 496, 1366
SspMI	CTAG	9 cut(s)	312, 428, 434, 519, 1139, 1283, 1317, 1496, 1589
SstI	GAGCTC	2 cut(s)	1098, 1529
StyD4I	CCNGG	1 cut(s)	605
StyI	CCWWGG	1 cut(s)	968
TaaI	ACNGT	4 cut(s)	201, 343, 590, 1010
TaiI	ACGT	3 cut(s)	380, 1135, 1647
TaqI	TCGA	3 cut(s)	357, 643, 824
TatI	WGTACW	1 cut(s)	611
TauI	GCSGC	6 cut(s)	8, 111, 132, 216, 245, 1377
TfiI	GAWTC	4 cut(s)	334, 1346, 1471, 1502
Tru1I	TTAA	7 cut(s)	195, 393, 783, 1169, 1421, 1433, 1629
Tru9I	TTAA	7 cut(s)	195, 393, 783, 1169, 1421, 1433, 1629
TscAI	CASTG	3 cut(s)	282, 1013, 1471
TseFI	GTSAC	2 cut(s)	273, 1392
TseI	GCWGC	3 cut(s)	58, 668, 1205
Tsp45I	GTSAC	2 cut(s)	273, 1392
TspGWI	ACGGA	1 cut(s)	576
TspRI	CASTG	3 cut(s)	282, 1013, 1471
Van91I	CCANNNNNTGG	2 cut(s)	733, 941
VpaK11BI	GGWCC	3 cut(s)	1271, 1677, 1701
XapI	RAATTY	7 cut(s)	359, 745, 816, 828, 1053, 1292, 1598
XmnI	GAANNNNTTC	2 cut(s)	746, 820
XspI	CTAG	9 cut(s)	312, 428, 434, 519, 1139, 1283, 1317, 1496, 1589
Zsp2I	ATGCAT	3 cut(s)	698, 1035, 1043

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.