Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0007132

Physical Location & Seq

Genomic Coordinates Forward (+)

3079994 .. 3083300

Gene Structure 3307 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1044400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1833 bp

ATGTTCATCACATTTACATCCCCTTCACGGTTTTGCGCTAATGTCCCTTGGACGCTGTTCCGCTCGCCATTTCTTCTTCCTTCTCTGAAATTCTTAGCTTCAAATCTCTTTATTTTCCGACGACAAATGGCGGCCAGAATCGGGTCCTTCCACCACAGCTTCGCCGAGAGAAGCAAGGAACGGCTGCTCTCGCGAAAAGGGTACTCCGACTTCGGTTTCAACAGCTCCGAAGCTGGCGACGAACACGTCAAATGCGGCTGCTTCCGAAGATTCTCCGATGGGTTCAACAACTTCTACAACAATTTCCAGGACACTTTCATCAAATTGTATCAAATGGGTCGTTCCGATCCTCGAAAAGCCATCTTTGCGACCAAGATGGGGATGTCGTTGGCGCTCGTGTCGCTGCTCATATTTTTCAAGGAGCCGCTCAAAAATGCCAGCCAGTATTCCATCTGGGCAATCCTTACTGTCGTCGTCGTTTTTGAATTCAGCGTAGGTGCAACCTTGAACAAGGGTTTTAATCGAGCTTTGGGTACGTTATCGGCCGGCGGGCTTGCTCTGGGGATTGCAGAGTTATCTGTACTGGCAGGAGATCTGCAGGAAGTTGTAATTGTTATCAGTGTGTTTATAGCAGGATTTTCTGCTAGTTATATCAAACTTTATCCGACAATGAAGCCATATGAATACGGATTTCGGGTATTCTTGTTGACATATTGTATCGTCTTGGTGTCTGGGACTTCATTATTCCTTCAGACAGCATTCTATCGATTGCTGCTTATTGCAGTCGGTGCCGGCATTTGTTTGCTTGTAAATATATTTATATACCCCATCTGGTCAGGGGAAGATCTCCATAAGCTGGTGGTGAAAAATTTAAGGGGTGTGGCTTCTTCTTTGGAAGGTGTTGTTAATCAGTATCTGCAATGTGTTGAATACGAGAGAATTCCTTCAAAAATTCTCACCTATCAAGCTTCTGATGACCCGTTGTATAGTGGTTATAGATCAGCTGTGCAATCTTCAAGCCAAGAGGAAACTCTGTTAGGCTTTGCTGTATGGGAGCCACCGCATGGCCCTTATAAGTCATTCAGTTACCCCTGGGTAAACTATGTCAAAGTTGGCGGTTCACTGAGGCATTGTGCATTCATGGTCATGGCGATGCACGGATGCATACTTTCAGAAATCCAGGCACCACCCGAAAAGAGACAGGTTTTTGGCATGGAGCTCCAGAGAGTTGGTGTTGAGGGTGCTAAATTGTTACGTGAGCTAGGAAGCAAAGTAGAAAAGATGGAGAAATTAAGTCCCAAAGACATACTTTTCGATGTGCATGAAGCCGCAGAAGAGTTGCAGATGAAAATAGACAAATACTCATACCTTCTTGTCAATTCAGAGAGCTGGGGACCTGAAATACTTCCCAAGGAATATGAAGATACTGTGCAGTTTGTCGATAAAGACAATGAAAATAAGCAGGTGGTGATCAATTCTCTCAGTGAATATTGGGATCCTCAGAATCCAAGCACAGCCGCTGATCCTTCCGTGCAACAATGGATATCTACAGAAAGTCTGTTAAAAAAACCAATATCATGGCCGCGCCTCTCATTCAATGTGCATGCTGTGCAAGAGGAACCTGAAGAATCAAAAGTTTACGAAAGCGCCAGCTCTTTATCTTTGGCAACATTTGCATCGCTTCTGATTGAGTTTGTGGCTCGGCTTCAAAATCTGGTGGAAGAATTTAAAGAGCTGAGTGAGAAAGCAAAGTTTAAGGATCCTGTTGAAGCCAAGGAGGAGGTTGTTGGGTTCTGGACCAGACTATTCAGGAGTTTGCGGTTGAAGAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005216 GO:0005253 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0008150 GO:0008509 GO:0008514 GO:0009705 GO:0009987 GO:0010118 GO:0015075 GO:0015103 GO:0015140 GO:0015267 GO:0015318 GO:0015556 GO:0015698 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0022803 GO:0022838 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071423 GO:0071702 GO:0090332 GO:0098588 GO:0098656 GO:0098805 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALMT

Protein Analysis

611

Amino Acids

69.03

Weight (kDa)

7.11

Isoelectric Point (pI)

41.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALMT	PF11744	111 - 580	3.2e-183	Aluminium activated malate transporter
FUSC_2	PF13515	148 - 270	2.4e-11	Fusaric acid resistance protein-like
FUSC	PF04632	152 - 303	3.6e-07	Fusaric acid resistance protein family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007132)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25480
fragaria_vesca	FvH4_4g27691 FvH4_4g27693 FvH4_4g27693 FvH4_4g27693 FvH4_4g27693 FvH4_4g27693 FvH4_4g27693
malus_domestica	MD13G1044400.v1.1
prunus_persica	Prupe.1G308100_v2.0.a1
pyrus_communis	pycom13g03900 pycom16g03980
rosa_chinensis	RchiOBHm_Chr4g0435551
rosa_laevigata	RLG00000006583
rosa_multiflora	Rmu_sc0001940.1_g000036
rosa_roxburghii	Rroxscaffold_5G00376780
rosa_rugosa	Rorug04G0286100 Rorug04G0286200 Rorug04G0286300 Rorug04G0286400
rosa_samantha	Rh4AG341900 Rh4BG350100 Rh4CG364800 Rh4DG344400
rosa_wichuraiana	Rw4G029820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1074
AarI	CACCTGC	1 cut(s)	1453
AasI	GACNNNNNNGTC	1 cut(s)	245
Acc36I	ACCTGC	1 cut(s)	1453
AccB1I	GGYRCC	2 cut(s)	788, 1183
AccB7I	CCANNNNNTGG	2 cut(s)	856, 1064
AccBSI	CCGCTC	2 cut(s)	63, 427
AccII	CGCG	2 cut(s)	193, 1585
AclWI	GGATC	6 cut(s)	341, 1490, 1503, 1517, 1754, 1767
AcoI	YGGCCR	3 cut(s)	132, 543, 1580
AcsI	RAATTY	6 cut(s)	89, 485, 868, 939, 951, 1724
AcuI	CTGAAG	2 cut(s)	734, 1644
AfaI	GTAC	3 cut(s)	203, 535, 582
AfiI	CCNNNNNNNGG	5 cut(s)	27, 141, 378, 856, 1064
AflIII	ACRYGT	1 cut(s)	244
AjiI	CACGTC	1 cut(s)	247
AjnI	CCWGG	3 cut(s)	306, 1091, 1179
Alw21I	GWGCWC	1 cut(s)	1221
Alw26I	GTCTC	1 cut(s)	1192
AlwI	GGATC	6 cut(s)	341, 1490, 1503, 1517, 1754, 1767
AlwNI	CAGNNNCTG	2 cut(s)	916, 1520
AoxI	GGCC	4 cut(s)	132, 543, 1066, 1580
ApeKI	GCWGC	4 cut(s)	184, 258, 403, 772
ApoI	RAATTY	6 cut(s)	89, 485, 868, 939, 951, 1724
ArsI	GACNNNNNNTTYG	2 cut(s)	1295, 1327
Asp700I	GAANNNNTTC	2 cut(s)	943, 1404
AspLEI	GCGC	4 cut(s)	38, 394, 1587, 1649
AspS9I	GGNCC	4 cut(s)	144, 1067, 1394, 1797
AsuHPI	GGTGA	3 cut(s)	874, 949, 1480
AvaII	GGWCC	3 cut(s)	144, 1394, 1797
BamHI	GGATCC	2 cut(s)	1495, 1759
BanI	GGYRCC	2 cut(s)	788, 1183
BanII	GRGCYC	1 cut(s)	1221
BarI	GAAGNNNNNNTAC	2 cut(s)	194, 226
BauI	CACGAG	1 cut(s)	395
Bbv12I	GWGCWC	1 cut(s)	1221
BbvI	GCAGC	4 cut(s)	171, 245, 390, 759
BccI	CCATC	6 cut(s)	272, 368, 370, 458, 836, 1276
BceAI	ACGGC	1 cut(s)	197
BciT130I	CCWGG	3 cut(s)	308, 1093, 1181
BclI	TGATCA	1 cut(s)	1470
BcoDI	GTCTC	1 cut(s)	1192
BfaI	CTAG	2 cut(s)	645, 1262
BfmI	CTRYAG	2 cut(s)	596, 1548
BfoI	RGCGCY	2 cut(s)	395, 1650
BfuAI	ACCTGC	1 cut(s)	1453
BglII	AGATCT	2 cut(s)	592, 844
Bme1390I	CCNGG	3 cut(s)	308, 1093, 1181
Bme18I	GGWCC	3 cut(s)	144, 1394, 1797
BmgBI	CACGTC	1 cut(s)	247
BmgT120I	GGNCC	4 cut(s)	144, 1067, 1394, 1797
BmiI	GGNNCC	9 cut(s)	145, 423, 790, 1056, 1185, 1395, 1497, 1620, 1761
BmrFI	CCNGG	3 cut(s)	308, 1093, 1181
BmsI	GCATC	3 cut(s)	1143, 1151, 1685
BpmI	CTGGAG	1 cut(s)	1205
Bsa29I	ATCGAT	1 cut(s)	766
BsaAI	YACGTR	1 cut(s)	1256
BsaJI	CCNNGG	5 cut(s)	47, 1091, 1092, 1410, 1773
Bsc4I	CCNNNNNNNGG	5 cut(s)	27, 141, 378, 856, 1064
Bse118I	RCCGGY	2 cut(s)	545, 791
Bse1I	ACTGG	2 cut(s)	442, 588
Bse3DI	GCAATG	1 cut(s)	926
BseBI	CCWGG	3 cut(s)	308, 1093, 1181
BseCI	ATCGAT	1 cut(s)	766
BseDI	CCNNGG	5 cut(s)	47, 1091, 1092, 1410, 1773
BseGI	GGATG	3 cut(s)	17, 387, 1166
BseLI	CCNNNNNNNGG	5 cut(s)	27, 141, 378, 856, 1064
BseMI	GCAATG	1 cut(s)	926
BseMII	CTCAG	4 cut(s)	1115, 1495, 1514, 1727
BseNI	ACTGG	2 cut(s)	442, 588
BseRI	GAGGAG	1 cut(s)	1793
BseX3I	CGGCCG	1 cut(s)	543
BseXI	GCAGC	4 cut(s)	171, 245, 390, 759
BseYI	CCCAGC	1 cut(s)	1389
BsgI	GTGCAG	1 cut(s)	1451
Bsh1236I	CGCG	2 cut(s)	193, 1585
Bsh1285I	CGRYCG	1 cut(s)	546
BshFI	GGCC	4 cut(s)	134, 545, 1068, 1582
BshNI	GGYRCC	2 cut(s)	788, 1183
BshVI	ATCGAT	1 cut(s)	766
BsiEI	CGRYCG	1 cut(s)	546
BsiHKAI	GWGCWC	1 cut(s)	1221
BsiSI	CCGG	2 cut(s)	546, 792
BslFI	GGGAC	4 cut(s)	29, 748, 1281, 1407
BslI	CCNNNNNNNGG	5 cut(s)	27, 141, 378, 856, 1064
BsmAI	GTCTC	1 cut(s)	1192
BsmFI	GGGAC	4 cut(s)	29, 748, 1281, 1407
BsmI	GAATGC	2 cut(s)	758, 1136
BsnI	GGCC	4 cut(s)	134, 545, 1068, 1582
Bsp1286I	GDGCHC	1 cut(s)	1221
Bsp143I	GATC	8 cut(s)	346, 592, 844, 998, 1470, 1495, 1522, 1759
Bsp68I	TCGCGA	1 cut(s)	193
BspANI	GGCC	4 cut(s)	134, 545, 1068, 1582
BspCNI	CTCAG	4 cut(s)	1116, 1494, 1513, 1728
BspDI	ATCGAT	1 cut(s)	766
BspFNI	CGCG	2 cut(s)	193, 1585
BspLI	GGNNCC	9 cut(s)	145, 423, 790, 1056, 1185, 1395, 1497, 1620, 1761
BspMAI	CTGCAG	1 cut(s)	600
BspMI	ACCTGC	1 cut(s)	1453
BspPI	GGATC	6 cut(s)	341, 1490, 1503, 1517, 1754, 1767
BspT107I	GGYRCC	2 cut(s)	788, 1183
BsrBI	CCGCTC	2 cut(s)	63, 427
BsrDI	GCAATG	1 cut(s)	926
BsrFI	RCCGGY	2 cut(s)	545, 791
BsrI	ACTGG	2 cut(s)	442, 588
BssAI	RCCGGY	2 cut(s)	545, 791
BssECI	CCNNGG	5 cut(s)	47, 1091, 1092, 1410, 1773
BssMI	GATC	8 cut(s)	346, 592, 844, 998, 1470, 1495, 1522, 1759
BssSI	CACGAG	1 cut(s)	395
BssT1I	CCWWGG	3 cut(s)	47, 1410, 1773
Bst2BI	CACGAG	1 cut(s)	395
Bst2UI	CCWGG	3 cut(s)	308, 1093, 1181
Bst4CI	ACNGT	3 cut(s)	30, 469, 1429
Bst6I	CTCTTC	1 cut(s)	1329
BstAPI	GCANNNNNTGC	3 cut(s)	788, 1609, 1673
BstBAI	YACGTR	1 cut(s)	1256
BstC8I	GCNNGC	9 cut(s)	65, 235, 439, 547, 551, 555, 793, 1605, 1651
BstDEI	CTNAG	5 cut(s)	94, 1124, 1481, 1500, 1736
BstF5I	GGATG	3 cut(s)	17, 387, 1166
BstFNI	CGCG	2 cut(s)	193, 1585
BstH2I	RGCGCY	2 cut(s)	395, 1650
BstHHI	GCGC	4 cut(s)	38, 394, 1587, 1649
BstKTI	GATC	8 cut(s)	349, 595, 847, 1001, 1473, 1498, 1525, 1762
BstMAI	GTCTC	1 cut(s)	1192
BstMBI	GATC	8 cut(s)	346, 592, 844, 998, 1470, 1495, 1522, 1759
BstMCI	CGRYCG	1 cut(s)	546
BstMWI	GCNNNNNNNGC	6 cut(s)	190, 365, 400, 788, 1609, 1673
BstNI	CCWGG	3 cut(s)	308, 1093, 1181
BstNSI	RCATGY	1 cut(s)	1607
BstSCI	CCNGG	3 cut(s)	306, 1091, 1179
BstSFI	CTRYAG	2 cut(s)	596, 1548
BstUI	CGCG	2 cut(s)	193, 1585
BstV1I	GCAGC	4 cut(s)	171, 245, 390, 759
BstX2I	RGATCY	4 cut(s)	592, 844, 1495, 1759
BstXI	CCANNNNNNTGG	2 cut(s)	1229, 1578
BstYI	RGATCY	4 cut(s)	592, 844, 1495, 1759
BstZI	CGGCCG	1 cut(s)	543
Bsu15I	ATCGAT	1 cut(s)	766
BsuRI	GGCC	4 cut(s)	134, 545, 1068, 1582
BsuTUI	ATCGAT	1 cut(s)	766
BtgZI	GCGATG	2 cut(s)	1166, 1662
BtrI	CACGTC	1 cut(s)	247
BtsCI	GGATG	3 cut(s)	17, 387, 1166
BtsIMutI	CAGTG	3 cut(s)	625, 1121, 1489
BtuMI	TCGCGA	1 cut(s)	193
BveI	ACCTGC	1 cut(s)	1453
Cac8I	GCNNGC	9 cut(s)	65, 235, 439, 547, 551, 555, 793, 1605, 1651
CaiI	CAGNNNCTG	2 cut(s)	916, 1520
CfoI	GCGC	4 cut(s)	38, 394, 1587, 1649
Cfr10I	RCCGGY	2 cut(s)	545, 791
Cfr13I	GGNCC	4 cut(s)	144, 1067, 1394, 1797
ClaI	ATCGAT	1 cut(s)	766
CseI	GACGC	1 cut(s)	61
Csp6I	GTAC	3 cut(s)	202, 534, 581
CviAII	CATG	7 cut(s)	1064, 1141, 1147, 1213, 1322, 1578, 1604
CviQI	GTAC	3 cut(s)	202, 534, 581
DdeI	CTNAG	5 cut(s)	94, 1124, 1481, 1500, 1736
DpnI	GATC	8 cut(s)	348, 594, 846, 1000, 1472, 1497, 1524, 1761
DpnII	GATC	8 cut(s)	346, 592, 844, 998, 1470, 1495, 1522, 1759
DraI	TTTAAA	1 cut(s)	1729
DrdI	GACNNNNNNGTC	1 cut(s)	245
DseDI	GACNNNNNNGTC	1 cut(s)	245
EaeI	YGGCCR	3 cut(s)	132, 543, 1580
EagI	CGGCCG	1 cut(s)	543
Eam1104I	CTCTTC	1 cut(s)	1329
EarI	CTCTTC	1 cut(s)	1329
Ecl136II	GAGCTC	1 cut(s)	1219
EclXI	CGGCCG	1 cut(s)	543
Eco130I	CCWWGG	3 cut(s)	47, 1410, 1773
Eco24I	GRGCYC	1 cut(s)	1221
Eco32I	GATATC	1 cut(s)	1545
Eco47I	GGWCC	3 cut(s)	144, 1394, 1797
Eco52I	CGGCCG	1 cut(s)	543
Eco53kI	GAGCTC	1 cut(s)	1219
Eco57I	CTGAAG	2 cut(s)	734, 1644
EcoICRI	GAGCTC	1 cut(s)	1219
EcoO109I	RGGNCCY	2 cut(s)	144, 1394
EcoRI	GAATTC	2 cut(s)	485, 939
EcoRII	CCWGG	3 cut(s)	306, 1091, 1179
EcoRV	GATATC	1 cut(s)	1545
EcoT14I	CCWWGG	3 cut(s)	47, 1410, 1773
EcoT22I	ATGCAT	1 cut(s)	1166
EcoT38I	GRGCYC	1 cut(s)	1221
ErhI	CCWWGG	3 cut(s)	47, 1410, 1773
FaeI	CATG	7 cut(s)	1067, 1144, 1150, 1216, 1325, 1581, 1607
FalI	AAGNNNNNCTT	2 cut(s)	1293, 1325
FaqI	GGGAC	4 cut(s)	29, 748, 1281, 1407
FatI	CATG	7 cut(s)	1063, 1140, 1146, 1212, 1321, 1577, 1603
FauI	CCCGC	1 cut(s)	542
FauNDI	CATATG	1 cut(s)	679
FbaI	TGATCA	1 cut(s)	1470
FokI	GGATG	3 cut(s)	4, 394, 1173
FriOI	GRGCYC	1 cut(s)	1221
FspBI	CTAG	2 cut(s)	645, 1262
GlaI	GCGC	4 cut(s)	37, 393, 1586, 1648
GsaI	CCCAGC	1 cut(s)	1393
GsuI	CTGGAG	1 cut(s)	1205
HaeII	RGCGCY	2 cut(s)	395, 1650
HaeIII	GGCC	4 cut(s)	134, 545, 1068, 1582
HapII	CCGG	2 cut(s)	546, 792
HgaI	GACGC	1 cut(s)	61
HhaI	GCGC	4 cut(s)	38, 394, 1587, 1649
Hin1II	CATG	7 cut(s)	1067, 1144, 1150, 1216, 1325, 1581, 1607
Hin6I	GCGC	4 cut(s)	36, 392, 1585, 1647
HinP1I	GCGC	4 cut(s)	36, 392, 1585, 1647
HincII	GTYRAC	1 cut(s)	708
HindII	GTYRAC	1 cut(s)	708
HindIII	AAGCTT	1 cut(s)	966
HinfI	GANTC	4 cut(s)	138, 270, 1504, 1628
HpaII	CCGG	2 cut(s)	546, 792
HphI	GGTGA	3 cut(s)	874, 949, 1480
Hpy166II	GTNNAC	4 cut(s)	708, 1099, 1121, 1639
Hpy188III	TCNNGA	4 cut(s)	192, 1222, 1795, 1810
Hpy8I	GTNNAC	4 cut(s)	708, 1099, 1121, 1639
Hpy99I	CGWCG	4 cut(s)	123, 242, 476, 479
HpyAV	CCTTC	8 cut(s)	33, 90, 157, 758, 890, 954, 1379, 1536
HpyCH4III	ACNGT	3 cut(s)	30, 469, 1429
HpyCH4IV	ACGT	3 cut(s)	246, 536, 1255
HpyF10VI	GCNNNNNNNGC	6 cut(s)	190, 365, 400, 788, 1609, 1673
HpyF3I	CTNAG	5 cut(s)	94, 1124, 1481, 1500, 1736
HpySE526I	ACGT	3 cut(s)	246, 536, 1255
Hsp92II	CATG	7 cut(s)	1067, 1144, 1150, 1216, 1325, 1581, 1607
HspAI	GCGC	4 cut(s)	36, 392, 1585, 1647
KroI	GCCGGC	2 cut(s)	545, 791
KroNI	GCCGGC	2 cut(s)	547, 793
Ksp22I	TGATCA	1 cut(s)	1470
Kzo9I	GATC	8 cut(s)	346, 592, 844, 998, 1470, 1495, 1522, 1759
LmnI	GCTCC	5 cut(s)	230, 421, 1054, 1216, 1224
Lsp1109I	GCAGC	4 cut(s)	171, 245, 390, 759
LweI	GCATC	3 cut(s)	1143, 1151, 1685
MaeI	CTAG	2 cut(s)	645, 1262
MaeII	ACGT	3 cut(s)	246, 536, 1255
MaeIII	GTNAC	2 cut(s)	1085, 1251
MalI	GATC	8 cut(s)	348, 594, 846, 1000, 1472, 1497, 1524, 1761
MbiI	CCGCTC	2 cut(s)	63, 427
MboI	GATC	8 cut(s)	346, 592, 844, 998, 1470, 1495, 1522, 1759
MflI	RGATCY	4 cut(s)	592, 844, 1495, 1759
MhlI	GDGCHC	1 cut(s)	1221
MmeI	TCCRAC	3 cut(s)	142, 231, 689
MnlI	CCTC	9 cut(s)	360, 1018, 1119, 1231, 1509, 1598, 1609, 1771, 1774
Mph1103I	ATGCAT	1 cut(s)	1166
MroNI	GCCGGC	2 cut(s)	545, 791
MroXI	GAANNNNTTC	2 cut(s)	943, 1404
MseI	TTAA	8 cut(s)	519, 872, 906, 1292, 1562, 1728, 1755, 1831
MslI	CAYNNNNRTG	2 cut(s)	1145, 1151
MspA1I	CMGCKG	2 cut(s)	1004, 1520
MspI	CCGG	2 cut(s)	546, 792
MspR9I	CCNGG	3 cut(s)	308, 1093, 1181
Mva1269I	GAATGC	2 cut(s)	758, 1136
MvaI	CCWGG	3 cut(s)	308, 1093, 1181
MvnI	CGCG	2 cut(s)	193, 1585
MwoI	GCNNNNNNNGC	6 cut(s)	190, 365, 400, 788, 1609, 1673
NaeI	GCCGGC	2 cut(s)	547, 793
NdeI	CATATG	1 cut(s)	679
NdeII	GATC	8 cut(s)	346, 592, 844, 998, 1470, 1495, 1522, 1759
NgoMIV	GCCGGC	2 cut(s)	545, 791
NlaIII	CATG	7 cut(s)	1067, 1144, 1150, 1216, 1325, 1581, 1607
NlaIV	GGNNCC	9 cut(s)	145, 423, 790, 1056, 1185, 1395, 1497, 1620, 1761
NmeAIII	GCCGAG	2 cut(s)	190, 1681
NruI	TCGCGA	1 cut(s)	193
NsiI	ATGCAT	1 cut(s)	1166
NspI	RCATGY	1 cut(s)	1607
PaeI	GCATGC	1 cut(s)	1607
PaqCI	CACCTGC	1 cut(s)	1453
PasI	CCCWGGG	1 cut(s)	1092
PctI	GAATGC	2 cut(s)	758, 1136
PdiI	GCCGGC	2 cut(s)	547, 793
PdmI	GAANNNNTTC	2 cut(s)	943, 1404
PfeI	GAWTC	4 cut(s)	138, 270, 1504, 1628
PflMI	CCANNNNNTGG	2 cut(s)	856, 1064
PfoI	TCCNGGA	1 cut(s)	306
Ppu21I	YACGTR	1 cut(s)	1256
PpuMI	RGGWCCY	2 cut(s)	144, 1394
PsiI	TTATAA	1 cut(s)	1074
Psp124BI	GAGCTC	1 cut(s)	1221
Psp5II	RGGWCCY	2 cut(s)	144, 1394
Psp6I	CCWGG	3 cut(s)	306, 1091, 1179
PspFI	CCCAGC	1 cut(s)	1389
PspGI	CCWGG	3 cut(s)	306, 1091, 1179
PspN4I	GGNNCC	9 cut(s)	145, 423, 790, 1056, 1185, 1395, 1497, 1620, 1761
PspPI	GGNCC	4 cut(s)	144, 1067, 1394, 1797
PspPPI	RGGWCCY	2 cut(s)	144, 1394
PstI	CTGCAG	1 cut(s)	600
PstNI	CAGNNNCTG	2 cut(s)	916, 1520
PsuI	RGATCY	4 cut(s)	592, 844, 1495, 1759
PvuII	CAGCTG	1 cut(s)	1004
RruI	TCGCGA	1 cut(s)	193
RsaI	GTAC	3 cut(s)	203, 535, 582
RsaNI	GTAC	3 cut(s)	202, 534, 581
RseI	CAYNNNNRTG	2 cut(s)	1145, 1151
SacI	GAGCTC	1 cut(s)	1221
SaqAI	TTAA	8 cut(s)	519, 872, 906, 1292, 1562, 1728, 1755, 1831
Sau3AI	GATC	8 cut(s)	346, 592, 844, 998, 1470, 1495, 1522, 1759
Sau96I	GGNCC	4 cut(s)	144, 1067, 1394, 1797
ScrFI	CCNGG	3 cut(s)	308, 1093, 1181
SduI	GDGCHC	1 cut(s)	1221
SfaNI	GCATC	3 cut(s)	1143, 1151, 1685
SfcI	CTRYAG	2 cut(s)	596, 1548
SinI	GGWCC	3 cut(s)	144, 1394, 1797
SmiMI	CAYNNNNRTG	2 cut(s)	1145, 1151
SphI	GCATGC	1 cut(s)	1607
SspI	AATATT	1 cut(s)	1490
SspMI	CTAG	2 cut(s)	645, 1262
SstI	GAGCTC	1 cut(s)	1221
StyD4I	CCNGG	3 cut(s)	306, 1091, 1179
StyI	CCWWGG	3 cut(s)	47, 1410, 1773
TaaI	ACNGT	3 cut(s)	30, 469, 1429
TaiI	ACGT	3 cut(s)	249, 539, 1258
TaqI	TCGA	5 cut(s)	352, 523, 766, 1314, 1440
TatI	WGTACW	1 cut(s)	580
TauI	GCSGC	6 cut(s)	134, 258, 427, 1331, 1520, 1585
TfiI	GAWTC	4 cut(s)	138, 270, 1504, 1628
Tru1I	TTAA	8 cut(s)	519, 872, 906, 1292, 1562, 1728, 1755, 1831
Tru9I	TTAA	8 cut(s)	519, 872, 906, 1292, 1562, 1728, 1755, 1831
TscAI	CASTG	3 cut(s)	625, 1128, 1489
TseI	GCWGC	4 cut(s)	184, 258, 403, 772
TspDTI	ATGAA	9 cut(s)	307, 686, 696, 729, 1129, 1338, 1361, 1434, 1467
TspGWI	ACGGA	3 cut(s)	702, 1173, 1519
TspRI	CASTG	3 cut(s)	625, 1128, 1489
Van91I	CCANNNNNTGG	2 cut(s)	856, 1064
VpaK11BI	GGWCC	3 cut(s)	144, 1394, 1797
XapI	RAATTY	6 cut(s)	89, 485, 868, 939, 951, 1724
XceI	RCATGY	1 cut(s)	1607
XmnI	GAANNNNTTC	2 cut(s)	943, 1404
XspI	CTAG	2 cut(s)	645, 1262
Zsp2I	ATGCAT	1 cut(s)	1166

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.