Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0007132

Physical Location & Seq

Genomic Coordinates Forward (+)

45961418 .. 45962790

Gene Structure 1373 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0286100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGGATGCACAGGTAATGATCAATGAACTAATTAGTGACATTCTAGACAGCCTTTTAGCAGAAGGAGTGAGGACACTTTTCCACTTCTTCCAATCAGTTATTTATACTTATATTCCTAGGAAATGTAATCAGGCAGCGCATGTTTTAGCTAGGAATGCGCTTTTGTATCATGCATTTCAAGTTTGGATTGAGGATGGGCCACAATGGCTTATAGCTGATCACATTAGGTTTTGCCTCTTCTATCGTCCGTCAGAAATCAAAACCCCCTTCTCTTCGACTGCTAGAACCCTAGAAGCAACGACGGCCGTCTCCGTCAACACCAAACCGTCGTTCAAGCAGTTTGACGTCGTTTTGGACCACTCAGACCACCACTACTCCGACAGTAATTGTCGTTTCGTCGACAATGCTGTCTATAAGAAGATCACGCGCGAGTGGAGAATTTTGGAGAAGGATCTCCCGGAAACCATATACGTGCGCATGTACGAGACAGGTGTCGACCTCGTCAGGGCTGTGATTGTCGGAGCAGAAGGCACACCCTTCGAGGACGGACTCTTCTTCTTCGACATCAAGTTCCCGGACAACTATCTGAACCAACCACCGGAGGTTCATTATCGCTCGCACGGATTGCAGGTTAACCCTAATCTGTATGCGTCTGGACATGCGCTTGTTCTCAACGACGAGCCCTTCTTTAACGAAGCGGGTTCTAGGTTTTTAAACTGGTGGTTTGACATGAAGGATGAGTCCCAAAAATACAATGGGGAAGCATTTATTTCAACATGCAAGTCAACGTTGTATTTGCTCCAAAATCCACCCAAGAATTTTGAGGCTTTCACTGCCGACCATTTTCGTGGAAGAGCGAGTGGGATTCTGAGAGTGTGCAAGGCTTATGCGAAAGTCGGCTATTACAACAAGGAGACTGAGGCGCTTCTCAAGGTTTCCAGGAAGTTCAAGGAGTCGATGGAGCAGTTGTACCCACAACTGGTCGAGGCTTTTAAAATGAATGAGGCTTCTCCAAAGAACAATCCGGTCGAGGCTTCTCCAAAGCACAATCCGGTCAAGGAATTGATGGCAGAGAGGAGTTCGACAAAGTTCGCAGATCAAGTGAAGAAGAAAGCTGAGCCCGCGGCCTTTACTGCAGGCTGGTTATTGTCTGCTGCATTTTTGGTCTGTGTAGCTTTTGTAGTAGTACTTGGAAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005216 GO:0005253 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0008150 GO:0008509 GO:0008514 GO:0009705 GO:0009987 GO:0010118 GO:0015075 GO:0015103 GO:0015140 GO:0015267 GO:0015318 GO:0015556 GO:0015698 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0022803 GO:0022838 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071423 GO:0071702 GO:0090332 GO:0098588 GO:0098656 GO:0098805 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALMT

Protein Analysis

399

Amino Acids

45.64

Weight (kDa)

6.47

Isoelectric Point (pI)

36.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UQ_con	PF00179	141 - 220	1.2e-10	Ubiquitin-conjugating enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007132)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25480
fragaria_vesca	FvH4_4g27691 FvH4_4g27693 FvH4_4g27693 FvH4_4g27693 FvH4_4g27693 FvH4_4g27693 FvH4_4g27693
malus_domestica	MD13G1044400.v1.1
prunus_persica	Prupe.1G308100_v2.0.a1
pyrus_communis	pycom13g03900 pycom16g03980
rosa_chinensis	RchiOBHm_Chr4g0435551
rosa_laevigata	RLG00000006583
rosa_multiflora	Rmu_sc0001940.1_g000036
rosa_roxburghii	Rroxscaffold_5G00376780
rosa_rugosa	Rorug04G0286100 Rorug04G0286200 Rorug04G0286300 Rorug04G0286400
rosa_samantha	Rh4AG341900 Rh4BG350100 Rh4CG364800 Rh4DG344400
rosa_wichuraiana	Rw4G029820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	407
AatII	GACGTC	1 cut(s)	348
Acc16I	TGCGCA	1 cut(s)	476
Acc36I	ACCTGC	1 cut(s)	619
AccI	GTMKAC	2 cut(s)	399, 495
AccII	CGCG	3 cut(s)	427, 429, 1124
AciI	CCGC	3 cut(s)	698, 1122, 1124
AclI	AACGTT	1 cut(s)	788
AclWI	GGATC	1 cut(s)	459
AcoI	YGGCCR	1 cut(s)	303
AcsI	RAATTY	2 cut(s)	438, 817
AcyI	GRCGYC	1 cut(s)	345
AfaI	GTAC	3 cut(s)	482, 971, 1188
AfiI	CCNNNNNNNGG	3 cut(s)	505, 598, 979
AgsI	TTSAA	4 cut(s)	179, 334, 774, 949
AjnI	CCWGG	1 cut(s)	938
AjuI	GAANNNNNNNTTGG	2 cut(s)	314, 346
AluBI	AGCT	5 cut(s)	149, 215, 1115, 1175, 1197
AluI	AGCT	5 cut(s)	149, 215, 1115, 1175, 1197
Alw26I	GTCTC	3 cut(s)	313, 479, 908
AlwI	GGATC	1 cut(s)	459
AoxI	GGCC	3 cut(s)	197, 303, 1125
ApeKI	GCWGC	2 cut(s)	134, 1154
ApoI	RAATTY	2 cut(s)	438, 817
AspA2I	CCTAGG	1 cut(s)	116
AspLEI	GCGC	6 cut(s)	139, 160, 429, 477, 664, 925
AspS9I	GGNCC	2 cut(s)	197, 355
AsuC2I	CCSGG	2 cut(s)	458, 575
AvaII	GGWCC	1 cut(s)	355
AvrII	CCTAGG	1 cut(s)	116
BanII	GRGCYC	2 cut(s)	684, 1122
BbvI	GCAGC	2 cut(s)	146, 1141
BccI	CCATC	3 cut(s)	188, 952, 1060
BceAI	ACGGC	2 cut(s)	290, 318
BcgI	CGANNNNNNTGC	2 cut(s)	520, 554
BciT130I	CCWGG	1 cut(s)	940
BclI	TGATCA	2 cut(s)	18, 217
BcnI	CCSGG	2 cut(s)	458, 575
BcoDI	GTCTC	3 cut(s)	313, 479, 908
BfaI	CTAG	6 cut(s)	44, 117, 150, 282, 290, 705
BfmI	CTRYAG	1 cut(s)	1134
BfoI	RGCGCY	1 cut(s)	926
BfuAI	ACCTGC	1 cut(s)	619
BglI	GCCNNNNNGGC	1 cut(s)	205
BisI	GCNGC	3 cut(s)	135, 1125, 1155
BlnI	CCTAGG	1 cut(s)	116
BlpI	GCTNAGC	1 cut(s)	1116
BlsI	GCNGC	3 cut(s)	136, 1126, 1156
BmcAI	AGTACT	1 cut(s)	1188
Bme1390I	CCNGG	3 cut(s)	458, 575, 940
Bme18I	GGWCC	1 cut(s)	355
BmgT120I	GGNCC	2 cut(s)	197, 355
BmrFI	CCNGG	3 cut(s)	458, 575, 940
BoxI	GACNNNNGTC	2 cut(s)	305, 491
Bpu1102I	GCTNAGC	1 cut(s)	1116
BpuEI	CTTGAG	1 cut(s)	914
BpuMI	CCSGG	2 cut(s)	458, 575
BsaAI	YACGTR	1 cut(s)	472
BsaHI	GRCGYC	1 cut(s)	345
BsaJI	CCNNGG	2 cut(s)	116, 1122
BsaWI	WCCGGW	3 cut(s)	598, 1024, 1051
BsaXI	ACNNNNNCTCC	4 cut(s)	359, 389, 953, 983
Bsc4I	CCNNNNNNNGG	3 cut(s)	505, 598, 979
Bse1I	ACTGG	2 cut(s)	722, 984
BseBI	CCWGG	1 cut(s)	940
BseDI	CCNNGG	2 cut(s)	116, 1122
BseGI	GGATG	3 cut(s)	10, 199, 742
BseLI	CCNNNNNNNGG	3 cut(s)	505, 598, 979
BseMII	CTCAG	4 cut(s)	375, 860, 909, 1107
BseNI	ACTGG	2 cut(s)	722, 984
BseRI	GAGGAG	1 cut(s)	1090
BseX3I	CGGCCG	1 cut(s)	303
BseXI	GCAGC	2 cut(s)	146, 1141
Bsh1236I	CGCG	3 cut(s)	427, 429, 1124
Bsh1285I	CGRYCG	2 cut(s)	306, 1029
BshFI	GGCC	3 cut(s)	199, 305, 1127
BsiEI	CGRYCG	2 cut(s)	306, 1029
BsiSI	CCGG	5 cut(s)	458, 575, 599, 1025, 1052
BslFI	GGGAC	1 cut(s)	727
BslI	CCNNNNNNNGG	3 cut(s)	505, 598, 979
BsmAI	GTCTC	3 cut(s)	313, 479, 908
BsmBI	CGTCTC	1 cut(s)	313
BsmFI	GGGAC	1 cut(s)	727
BsmI	GAATGC	1 cut(s)	160
BsnI	GGCC	3 cut(s)	199, 305, 1127
Bsp1286I	GDGCHC	2 cut(s)	684, 1122
Bsp143I	GATC	5 cut(s)	18, 217, 420, 451, 1096
Bsp1720I	GCTNAGC	1 cut(s)	1116
BspACI	CCGC	3 cut(s)	698, 1122, 1124
BspANI	GGCC	3 cut(s)	199, 305, 1127
BspCNI	CTCAG	4 cut(s)	374, 861, 910, 1108
BspFNI	CGCG	3 cut(s)	427, 429, 1124
BspMAI	CTGCAG	1 cut(s)	1138
BspMI	ACCTGC	1 cut(s)	619
BspPI	GGATC	1 cut(s)	459
BspQI	GCTCTTC	1 cut(s)	847
BsrI	ACTGG	2 cut(s)	722, 984
BssECI	CCNNGG	2 cut(s)	116, 1122
BssMI	GATC	5 cut(s)	18, 217, 420, 451, 1096
BssNI	GRCGYC	1 cut(s)	345
BssT1I	CCWWGG	1 cut(s)	116
Bst2UI	CCWGG	1 cut(s)	940
Bst4CI	ACNGT	2 cut(s)	327, 383
Bst6I	CTCTTC	4 cut(s)	242, 277, 557, 847
BstACI	GRCGYC	1 cut(s)	345
BstAPI	GCANNNNNTGC	1 cut(s)	625
BstBAI	YACGTR	1 cut(s)	472
BstC8I	GCNNGC	3 cut(s)	617, 1122, 1138
BstDEI	CTNAG	4 cut(s)	361, 869, 918, 1116
BstDSI	CCRYGG	1 cut(s)	1122
BstF5I	GGATG	3 cut(s)	10, 199, 742
BstFNI	CGCG	3 cut(s)	427, 429, 1124
BstH2I	RGCGCY	1 cut(s)	926
BstHHI	GCGC	6 cut(s)	139, 160, 429, 477, 664, 925
BstKTI	GATC	5 cut(s)	21, 220, 423, 454, 1099
BstMAI	GTCTC	3 cut(s)	313, 479, 908
BstMBI	GATC	5 cut(s)	18, 217, 420, 451, 1096
BstMCI	CGRYCG	2 cut(s)	306, 1029
BstMWI	GCNNNNNNNGC	7 cut(s)	155, 205, 302, 625, 833, 1121, 1133
BstNI	CCWGG	1 cut(s)	940
BstNSI	RCATGY	4 cut(s)	143, 481, 662, 780
BstPAI	GACNNNNGTC	2 cut(s)	305, 491
BstSCI	CCNGG	3 cut(s)	456, 573, 938
BstSFI	CTRYAG	1 cut(s)	1134
BstUI	CGCG	3 cut(s)	427, 429, 1124
BstV1I	GCAGC	2 cut(s)	146, 1141
BstX2I	RGATCY	1 cut(s)	451
BstXI	CCANNNNNNTGG	1 cut(s)	848
BstYI	RGATCY	1 cut(s)	451
BstZI	CGGCCG	1 cut(s)	303
BsuRI	GGCC	3 cut(s)	199, 305, 1127
BtgI	CCRYGG	1 cut(s)	1122
BtsCI	GGATG	3 cut(s)	10, 199, 742
BtsI	GCAGTG	1 cut(s)	831
BtsIMutI	CAGTG	1 cut(s)	831
BveI	ACCTGC	1 cut(s)	619
Cac8I	GCNNGC	3 cut(s)	617, 1122, 1138
CfoI	GCGC	6 cut(s)	139, 160, 429, 477, 664, 925
Cfr13I	GGNCC	2 cut(s)	197, 355
Cfr42I	CCGCGG	1 cut(s)	1125
CseI	GACGC	1 cut(s)	639
Csp6I	GTAC	3 cut(s)	481, 970, 1187
CviAII	CATG	6 cut(s)	140, 170, 478, 659, 730, 777
CviQI	GTAC	3 cut(s)	481, 970, 1187
DdeI	CTNAG	4 cut(s)	361, 869, 918, 1116
DpnI	GATC	5 cut(s)	20, 219, 422, 453, 1098
DpnII	GATC	5 cut(s)	18, 217, 420, 451, 1096
DraI	TTTAAA	2 cut(s)	714, 994
DrdI	GACNNNNNNGTC	1 cut(s)	407
DseDI	GACNNNNNNGTC	1 cut(s)	407
EaeI	YGGCCR	1 cut(s)	303
EagI	CGGCCG	1 cut(s)	303
Eam1104I	CTCTTC	4 cut(s)	242, 277, 557, 847
EarI	CTCTTC	4 cut(s)	242, 277, 557, 847
EclXI	CGGCCG	1 cut(s)	303
Eco130I	CCWWGG	1 cut(s)	116
Eco24I	GRGCYC	2 cut(s)	684, 1122
Eco47I	GGWCC	1 cut(s)	355
Eco52I	CGGCCG	1 cut(s)	303
EcoRII	CCWGG	1 cut(s)	938
EcoT14I	CCWWGG	1 cut(s)	116
EcoT22I	ATGCAT	1 cut(s)	175
EcoT38I	GRGCYC	2 cut(s)	684, 1122
ErhI	CCWWGG	1 cut(s)	116
Esp3I	CGTCTC	1 cut(s)	313
FaeI	CATG	6 cut(s)	143, 173, 481, 662, 733, 780
FaqI	GGGAC	1 cut(s)	727
FatI	CATG	6 cut(s)	139, 169, 477, 658, 729, 776
FauI	CCCGC	2 cut(s)	691, 1129
FbaI	TGATCA	2 cut(s)	18, 217
FblI	GTMKAC	2 cut(s)	399, 495
Fnu4HI	GCNGC	3 cut(s)	135, 1125, 1155
FokI	GGATG	3 cut(s)	17, 206, 749
FriOI	GRGCYC	2 cut(s)	684, 1122
Fsp4HI	GCNGC	3 cut(s)	135, 1125, 1155
FspAI	RTGCGCAY	1 cut(s)	476
FspBI	CTAG	6 cut(s)	44, 117, 150, 282, 290, 705
FspI	TGCGCA	1 cut(s)	476
GlaI	GCGC	6 cut(s)	138, 159, 428, 476, 663, 924
GluI	GCNGC	3 cut(s)	135, 1125, 1155
HaeII	RGCGCY	1 cut(s)	926
HaeIII	GGCC	3 cut(s)	199, 305, 1127
HapII	CCGG	5 cut(s)	458, 575, 599, 1025, 1052
HgaI	GACGC	1 cut(s)	639
HhaI	GCGC	6 cut(s)	139, 160, 429, 477, 664, 925
Hin1I	GRCGYC	1 cut(s)	345
Hin1II	CATG	6 cut(s)	143, 173, 481, 662, 733, 780
Hin6I	GCGC	6 cut(s)	137, 158, 427, 475, 662, 923
HinP1I	GCGC	6 cut(s)	137, 158, 427, 475, 662, 923
HincII	GTYRAC	5 cut(s)	316, 400, 496, 634, 786
HindII	GTYRAC	5 cut(s)	316, 400, 496, 634, 786
HinfI	GANTC	4 cut(s)	549, 740, 865, 953
HpaI	GTTAAC	1 cut(s)	634
HpaII	CCGG	5 cut(s)	458, 575, 599, 1025, 1052
Hpy166II	GTNNAC	5 cut(s)	316, 400, 496, 634, 786
Hpy188I	TCNGA	6 cut(s)	253, 364, 379, 521, 588, 870
Hpy188III	TCNNGA	2 cut(s)	44, 654
Hpy8I	GTNNAC	5 cut(s)	316, 400, 496, 634, 786
Hpy99I	CGWCG	5 cut(s)	304, 331, 350, 401, 680
HpyAV	CCTTC	7 cut(s)	56, 277, 442, 521, 547, 694, 727
HpyCH4III	ACNGT	2 cut(s)	327, 383
HpyCH4IV	ACGT	3 cut(s)	345, 471, 788
HpyCH4V	TGCA	7 cut(s)	8, 173, 628, 780, 879, 1136, 1157
HpyF10VI	GCNNNNNNNGC	7 cut(s)	155, 205, 302, 625, 833, 1121, 1133
HpyF3I	CTNAG	4 cut(s)	361, 869, 918, 1116
HpySE526I	ACGT	3 cut(s)	345, 471, 788
Hsp92I	GRCGYC	1 cut(s)	345
Hsp92II	CATG	6 cut(s)	143, 173, 481, 662, 733, 780
HspAI	GCGC	6 cut(s)	137, 158, 427, 475, 662, 923
Ksp22I	TGATCA	2 cut(s)	18, 217
KspAI	GTTAAC	1 cut(s)	634
KspI	CCGCGG	1 cut(s)	1125
Kzo9I	GATC	5 cut(s)	18, 217, 420, 451, 1096
LguI	GCTCTTC	1 cut(s)	847
LmnI	GCTCC	3 cut(s)	521, 804, 961
Lsp1109I	GCAGC	2 cut(s)	146, 1141
MaeI	CTAG	6 cut(s)	44, 117, 150, 282, 290, 705
MaeII	ACGT	3 cut(s)	345, 471, 788
MaeIII	GTNAC	1 cut(s)	35
MalI	GATC	5 cut(s)	20, 219, 422, 453, 1098
MboI	GATC	5 cut(s)	18, 217, 420, 451, 1096
MflI	RGATCY	1 cut(s)	451
MhlI	GDGCHC	2 cut(s)	684, 1122
MluCI	AATT	5 cut(s)	30, 385, 438, 817, 1061
MlyI	GAGTC	3 cut(s)	543, 749, 962
MmeI	TCCRAC	2 cut(s)	402, 499
Mph1103I	ATGCAT	1 cut(s)	175
MseI	TTAA	4 cut(s)	633, 690, 713, 993
MslI	CAYNNNNRTG	2 cut(s)	470, 846
MspA1I	CMGCKG	1 cut(s)	1124
MspI	CCGG	5 cut(s)	458, 575, 599, 1025, 1052
MspR9I	CCNGG	3 cut(s)	458, 575, 940
Mva1269I	GAATGC	1 cut(s)	160
MvaI	CCWGG	1 cut(s)	940
MvnI	CGCG	3 cut(s)	427, 429, 1124
MwoI	GCNNNNNNNGC	7 cut(s)	155, 205, 302, 625, 833, 1121, 1133
NciI	CCSGG	2 cut(s)	458, 575
NdeII	GATC	5 cut(s)	18, 217, 420, 451, 1096
NlaIII	CATG	6 cut(s)	143, 173, 481, 662, 733, 780
NmuCI	GTSAC	1 cut(s)	35
NsbI	TGCGCA	1 cut(s)	476
NsiI	ATGCAT	1 cut(s)	175
NspI	RCATGY	4 cut(s)	143, 481, 662, 780
PciSI	GCTCTTC	1 cut(s)	847
PctI	GAATGC	1 cut(s)	160
PfeI	GAWTC	1 cut(s)	865
PflFI	GACNNNGTC	1 cut(s)	500
PfoI	TCCNGGA	3 cut(s)	456, 573, 938
PkrI	GCNGC	3 cut(s)	136, 1126, 1156
PleI	GAGTC	3 cut(s)	543, 748, 961
PpsI	GAGTC	3 cut(s)	543, 748, 961
Ppu21I	YACGTR	1 cut(s)	472
PshAI	GACNNNNGTC	2 cut(s)	305, 491
Psp1406I	AACGTT	1 cut(s)	788
Psp6I	CCWGG	1 cut(s)	938
PspGI	CCWGG	1 cut(s)	938
PspPI	GGNCC	2 cut(s)	197, 355
PstI	CTGCAG	1 cut(s)	1138
PsuI	RGATCY	1 cut(s)	451
PsyI	GACNNNGTC	1 cut(s)	500
RsaI	GTAC	3 cut(s)	482, 971, 1188
RsaNI	GTAC	3 cut(s)	481, 970, 1187
RseI	CAYNNNNRTG	2 cut(s)	470, 846
SacII	CCGCGG	1 cut(s)	1125
SalI	GTCGAC	2 cut(s)	398, 494
SapI	GCTCTTC	1 cut(s)	847
SaqAI	TTAA	4 cut(s)	633, 690, 713, 993
SatI	GCNGC	3 cut(s)	135, 1125, 1155
Sau3AI	GATC	5 cut(s)	18, 217, 420, 451, 1096
Sau96I	GGNCC	2 cut(s)	197, 355
ScaI	AGTACT	1 cut(s)	1188
SchI	GAGTC	3 cut(s)	543, 749, 962
ScrFI	CCNGG	3 cut(s)	458, 575, 940
SduI	GDGCHC	2 cut(s)	684, 1122
SfcI	CTRYAG	1 cut(s)	1134
Sfr303I	CCGCGG	1 cut(s)	1125
SgrBI	CCGCGG	1 cut(s)	1125
SinI	GGWCC	1 cut(s)	355
SmiMI	CAYNNNNRTG	2 cut(s)	470, 846
SmlI	CTYRAG	1 cut(s)	929
SmoI	CTYRAG	1 cut(s)	929
Sse9I	AATT	5 cut(s)	30, 385, 438, 817, 1061
SsiI	CCGC	3 cut(s)	698, 1122, 1124
SspMI	CTAG	6 cut(s)	44, 117, 150, 282, 290, 705
StyD4I	CCNGG	3 cut(s)	456, 573, 938
StyI	CCWWGG	1 cut(s)	116
TaaI	ACNGT	2 cut(s)	327, 383
TaiI	ACGT	3 cut(s)	348, 474, 791
TaqI	TCGA	9 cut(s)	275, 399, 495, 540, 561, 956, 984, 1029, 1082
TasI	AATT	5 cut(s)	30, 385, 438, 817, 1061
TatI	WGTACW	1 cut(s)	1186
TauI	GCSGC	1 cut(s)	1127
TfiI	GAWTC	1 cut(s)	865
Tru1I	TTAA	4 cut(s)	633, 690, 713, 993
Tru9I	TTAA	4 cut(s)	633, 690, 713, 993
TscAI	CASTG	1 cut(s)	838
TseFI	GTSAC	1 cut(s)	35
TseI	GCWGC	2 cut(s)	134, 1154
Tsp45I	GTSAC	1 cut(s)	35
TspDTI	ATGAA	4 cut(s)	39, 596, 746, 1013
TspGWI	ACGGA	4 cut(s)	237, 301, 561, 636
TspRI	CASTG	1 cut(s)	838
Tth111I	GACNNNGTC	1 cut(s)	500
VpaK11BI	GGWCC	1 cut(s)	355
XapI	RAATTY	2 cut(s)	438, 817
XbaI	TCTAGA	1 cut(s)	43
XceI	RCATGY	4 cut(s)	143, 481, 662, 780
XcmI	CCANNNNNNNNNTGG	1 cut(s)	752
XmaJI	CCTAGG	1 cut(s)	116
XmiI	GTMKAC	2 cut(s)	399, 495
XspI	CTAG	6 cut(s)	44, 117, 150, 282, 290, 705
ZraI	GACGTC	1 cut(s)	346
ZrmI	AGTACT	1 cut(s)	1188
Zsp2I	ATGCAT	1 cut(s)	175

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.