AT1G26090

Anion-transporting ATPase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
9020380 .. 9022769
2390 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G26090.1

Sequence Viewer

Length: 1368 bp
ATGGTGTCTTTGGTCAATTCTTCTCTAACATGCTCAAGCCTTACTCTGAATCTCCTTCCCATTCTGCGTACGGAAACACCTTCACTCTCCAGGAAGCGTCGAGCAGCTTATGTGGCGGCTACATCTTCTAGAGATGTTAACGATACCGCCGCTGATTCTTCTCAGAAACTCACCAAATTCGTCACCTTTCTCGGAAAAGGCGGCTCCGGCAAGACCACCGCCGCTGTTTTCGCCGCTCAGCATTACGCATTGGCTGGGCTCAGTACATGTTTGGTGATACATAATCAAGACCCTTCTGCTGAATTCCTCCTTGGAAGCAAGATTGGGACTTCTCCTACCTTGATCAACGACAATCTCTCTGTCATTAGGCTAGAAACCACAAAAATGCTTCTAGAACCTCTTAAACAGCTGAAGCAAGCAGATGCTCGACTTAATATGACCCAAGGGGTTCTTGAAGGGGTGGTTGGAGAAGAGCTAGGAGTACTTCCAGGGATGGATTCCATCTTTTCAATGCTTGAACTCGAGAGGCTTGTTGGTTTCTTTAGGCAAGCAACCCGAAAGAATCACAAGGGGAAGCCTTTTGACGTTATAATTTATGATGGCATTAGCACTGAGGAAACTCTTCGGATGATAGGTCTAAGCAGTAAAACAAGATTGTATGCGAAATATCTGAGAAGTTTGGCCGAGAAGACAGATTTGGGGAGGCTAACAAGTCCGTCCATTATGAGATTTGTTGATGAGTCAATGAACATAAACAGTAATAAGTCGCCTTTCGATGGTATGACAAGTCCTGCCATGTGGGATACTTTGGAACGTTTCTTGGAGACTGGCGCTTCTGCTTGGAGAGATCCAGAGAGATTCAGGAGTTTTCTTGTAATGGACCCAAACAATCCTATGTCTGTTAAAGCTGCATTACGGTATTGGGGTTGTACAGTACAAGCAGGATCTCATGTTTCTGGGGCGTTTGCTATTTCTTCTTCTCATCTGACCAGCCAAATCCCGAAAGCAGATTTTGTGCCACTGCCATTTGCTTCTGCATCAGTTCCATTTACTATAACTGGTCTGGATTGGGACAAAATTCTGCTGGACCAAGCGAATTCAAGTATCCGGGAACTTCTCTCTGAAACTGTAAGCCATGGGACCAGCTTGACACAAACAGTAATGTTTGATACAGCAAAGAAATTGGTGACTCTTTTCATGCCGGGGTTTGAAAAATCAGAAATCAAACTGTATCAGTATAGAGGAGGTTCTGAGCTCTTAATAGAAGCTGGGGACCAAAGACGAGTGATTCATTTACCGTCTCAGATTCAAGGAAAAGTTGGAGGAGCAAAGTTTGTGGACAGAAGTCTCATCGTCACAATGCGGTAA

Protein Analysis

455

Amino Acids

49.91

Weight (kDa)

9.16

Isoelectric Point (pI)

43.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArsA_ATPase PF02374 58 - 250 1.1e-19 Anion-transporting ATPase
ArsA_HSP20 PF17886 396 - 454 4.3e-13 HSP20-like domain found in ArsA
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 590
AccBSI CCGCTC 1 cut(s) 236
AciI CCGC 8 cut(s) 116, 147, 150, 201, 219, 222, 234, 1363
AclI AACGTT 1 cut(s) 814
AclWI GGATC 2 cut(s) 842, 952
AcoI YGGCCR 1 cut(s) 681
AcsI RAATTY 4 cut(s) 176, 302, 1077, 1096
AcuI CTGAAG 1 cut(s) 431
AfaI GTAC 5 cut(s) 70, 265, 483, 931, 936
AfiI CCNNNNNNNGG 1 cut(s) 776
AflIII ACRYGT 1 cut(s) 266
AgsI TTSAA 6 cut(s) 455, 510, 518, 1101, 1211, 1310
AjnI CCWGG 2 cut(s) 89, 487
AjuI GAANNNNNNNTTGG 6 cut(s) 294, 326, 447, 479, 680, 712
AluBI AGCT 7 cut(s) 107, 409, 475, 908, 1146, 1255, 1268
AluI AGCT 7 cut(s) 107, 409, 475, 908, 1146, 1255, 1268
Alw21I GWGCWC 1 cut(s) 1257
Alw26I GTCTC 3 cut(s) 818, 1305, 1352
AlwI GGATC 2 cut(s) 842, 952
Ama87I CYCGRG 1 cut(s) 521
AoxI GGCC 1 cut(s) 681
ApeKI GCWGC 2 cut(s) 104, 908
ApoI RAATTY 4 cut(s) 176, 302, 1077, 1096
Asp700I GAANNNNTTC 1 cut(s) 621
AspLEI GCGC 1 cut(s) 833
AspS9I GGNCC 4 cut(s) 880, 1087, 1140, 1273
AsuC2I CCSGG 2 cut(s) 1109, 1203
AsuHPI GGTGA 4 cut(s) 163, 175, 286, 1198
AvaI CYCGRG 1 cut(s) 521
AvaII GGWCC 4 cut(s) 880, 1087, 1140, 1273
BanII GRGCYC 2 cut(s) 261, 1257
BbsI GAAGAC 1 cut(s) 695
Bbv12I GWGCWC 1 cut(s) 1257
BbvI GCAGC 2 cut(s) 116, 895
BccI CCATC 4 cut(s) 487, 509, 593, 770
BciT130I CCWGG 2 cut(s) 91, 489
BciVI GTATCC 2 cut(s) 796, 1115
BclI TGATCA 1 cut(s) 342
BcnI CCSGG 2 cut(s) 1109, 1203
BcoDI GTCTC 3 cut(s) 818, 1305, 1352
BfaI CTAG 4 cut(s) 129, 371, 392, 476
BfoI RGCGCY 1 cut(s) 834
BfuI GTATCC 2 cut(s) 796, 1115
BisI GCNGC 7 cut(s) 105, 117, 150, 202, 222, 234, 909
BlpI GCTNAGC 1 cut(s) 237
BlsI GCNGC 7 cut(s) 106, 118, 151, 203, 223, 235, 910
BmcAI AGTACT 1 cut(s) 483
Bme1390I CCNGG 4 cut(s) 91, 489, 1109, 1203
Bme18I GGWCC 4 cut(s) 880, 1087, 1140, 1273
BmeT110I CYCGRG 1 cut(s) 521
BmgT120I GGNCC 4 cut(s) 880, 1087, 1140, 1273
BmiI GGNNCC 4 cut(s) 205, 882, 1141, 1274
BmrFI CCNGG 4 cut(s) 91, 489, 1109, 1203
BmsI GCATC 2 cut(s) 412, 1046
BoxI GACNNNNGTC 1 cut(s) 1344
BpiI GAAGAC 1 cut(s) 695
BpmI CTGGAG 1 cut(s) 73
Bpu1102I GCTNAGC 1 cut(s) 237
BpuEI CTTGAG 1 cut(s) 19
BpuMI CCSGG 2 cut(s) 1109, 1203
BsaJI CCNNGG 5 cut(s) 310, 442, 488, 1135, 1202
Bsc4I CCNNNNNNNGG 1 cut(s) 776
Bse1I ACTGG 2 cut(s) 832, 1063
BseBI CCWGG 2 cut(s) 91, 489
BseDI CCNNGG 5 cut(s) 310, 442, 488, 1135, 1202
BseGI GGATG 2 cut(s) 498, 633
BseLI CCNNNNNNNGG 1 cut(s) 776
BseMII CTCAG 7 cut(s) 176, 251, 274, 603, 662, 1242, 1316
BseNI ACTGG 2 cut(s) 832, 1063
BseRI GAGGAG 2 cut(s) 1257, 1338
BseXI GCAGC 2 cut(s) 116, 895
BseYI CCCAGC 2 cut(s) 254, 1268
BshFI GGCC 1 cut(s) 683
BsiHKAI GWGCWC 1 cut(s) 1257
BsiHKCI CYCGRG 1 cut(s) 521
BsiSI CCGG 3 cut(s) 207, 1108, 1202
BsiWI CGTACG 1 cut(s) 68
BslFI GGGAC 4 cut(s) 340, 1085, 1153, 1286
BslI CCNNNNNNNGG 1 cut(s) 776
BsmAI GTCTC 3 cut(s) 818, 1305, 1352
BsmBI CGTCTC 1 cut(s) 1305
BsmFI GGGAC 4 cut(s) 340, 1085, 1153, 1286
BsnI GGCC 1 cut(s) 683
BsoBI CYCGRG 1 cut(s) 521
Bsp1286I GDGCHC 2 cut(s) 261, 1257
Bsp1407I TGTACA 1 cut(s) 929
Bsp143I GATC 3 cut(s) 342, 847, 944
Bsp1720I GCTNAGC 1 cut(s) 237
Bsp19I CCATGG 1 cut(s) 1135
BspACI CCGC 8 cut(s) 116, 147, 150, 201, 219, 222, 234, 1363
BspANI GGCC 1 cut(s) 683
BspCNI CTCAG 7 cut(s) 175, 250, 273, 604, 663, 1243, 1315
BspLI GGNNCC 4 cut(s) 205, 882, 1141, 1274
BspPI GGATC 2 cut(s) 842, 952
BspQI GCTCTTC 1 cut(s) 465
BsrBI CCGCTC 1 cut(s) 236
BsrGI TGTACA 1 cut(s) 929
BsrI ACTGG 2 cut(s) 832, 1063
BssECI CCNNGG 5 cut(s) 310, 442, 488, 1135, 1202
BssMI GATC 3 cut(s) 342, 847, 944
BssT1I CCWWGG 3 cut(s) 310, 442, 1135
Bst2UI CCWGG 2 cut(s) 91, 489
Bst4CI ACNGT 7 cut(s) 758, 918, 934, 1129, 1159, 1230, 1299
Bst6I CTCTTC 2 cut(s) 465, 627
BstAUI TGTACA 1 cut(s) 929
BstC8I GCNNGC 2 cut(s) 417, 549
BstDEI CTNAG 8 cut(s) 162, 237, 260, 612, 638, 671, 1251, 1302
BstDSI CCRYGG 1 cut(s) 1135
BstF5I GGATG 2 cut(s) 498, 633
BstH2I RGCGCY 1 cut(s) 834
BstHHI GCGC 1 cut(s) 833
BstKTI GATC 3 cut(s) 345, 850, 947
BstMAI GTCTC 3 cut(s) 818, 1305, 1352
BstMBI GATC 3 cut(s) 342, 847, 944
BstMWI GCNNNNNNNGC 3 cut(s) 113, 207, 230
BstNI CCWGG 2 cut(s) 91, 489
BstNSI RCATGY 2 cut(s) 33, 270
BstPAI GACNNNNGTC 1 cut(s) 1344
BstSCI CCNGG 4 cut(s) 89, 487, 1107, 1201
BstV1I GCAGC 2 cut(s) 116, 895
BstV2I GAAGAC 1 cut(s) 695
BstX2I RGATCY 2 cut(s) 847, 944
BstYI RGATCY 2 cut(s) 847, 944
BsuI GTATCC 2 cut(s) 796, 1115
BsuRI GGCC 1 cut(s) 683
BtgI CCRYGG 1 cut(s) 1135
BtsCI GGATG 2 cut(s) 498, 633
BtsI GCAGTG 1 cut(s) 1019
BtsIMutI CAGTG 2 cut(s) 609, 1019
Cac8I GCNNGC 2 cut(s) 417, 549
CfoI GCGC 1 cut(s) 833
Cfr13I GGNCC 4 cut(s) 880, 1087, 1140, 1273
CseI GACGC 1 cut(s) 86
Csp6I GTAC 5 cut(s) 69, 264, 482, 930, 935
CspCI CAANNNNNGTGG 2 cut(s) 1317, 1352
CviAII CATG 6 cut(s) 30, 267, 796, 950, 1136, 1198
CviQI GTAC 5 cut(s) 69, 264, 482, 930, 935
DdeI CTNAG 8 cut(s) 162, 237, 260, 612, 638, 671, 1251, 1302
DpnI GATC 3 cut(s) 344, 849, 946
DpnII GATC 3 cut(s) 342, 847, 944
EaeI YGGCCR 1 cut(s) 681
Eam1104I CTCTTC 2 cut(s) 465, 627
EarI CTCTTC 2 cut(s) 465, 627
Ecl136II GAGCTC 1 cut(s) 1255
Eco130I CCWWGG 3 cut(s) 310, 442, 1135
Eco24I GRGCYC 2 cut(s) 261, 1257
Eco47I GGWCC 4 cut(s) 880, 1087, 1140, 1273
Eco53kI GAGCTC 1 cut(s) 1255
Eco57I CTGAAG 1 cut(s) 431
Eco88I CYCGRG 1 cut(s) 521
EcoICRI GAGCTC 1 cut(s) 1255
EcoRI GAATTC 2 cut(s) 302, 1096
EcoRII CCWGG 2 cut(s) 89, 487
EcoT14I CCWWGG 3 cut(s) 310, 442, 1135
EcoT38I GRGCYC 2 cut(s) 261, 1257
ErhI CCWWGG 3 cut(s) 310, 442, 1135
Esp3I CGTCTC 1 cut(s) 1305
FaeI CATG 6 cut(s) 33, 270, 799, 953, 1139, 1201
FalI AAGNNNNNCTT 2 cut(s) 435, 467
FaqI GGGAC 4 cut(s) 340, 1085, 1153, 1286
FatI CATG 6 cut(s) 29, 266, 795, 949, 1135, 1197
FbaI TGATCA 1 cut(s) 342
Fnu4HI GCNGC 7 cut(s) 105, 117, 150, 202, 222, 234, 909
FokI GGATG 2 cut(s) 505, 640
FriOI GRGCYC 2 cut(s) 261, 1257
Fsp4HI GCNGC 7 cut(s) 105, 117, 150, 202, 222, 234, 909
FspBI CTAG 4 cut(s) 129, 371, 392, 476
GlaI GCGC 1 cut(s) 832
GluI GCNGC 7 cut(s) 105, 117, 150, 202, 222, 234, 909
GsaI CCCAGC 2 cut(s) 258, 1272
GsuI CTGGAG 1 cut(s) 73
HaeII RGCGCY 1 cut(s) 834
HaeIII GGCC 1 cut(s) 683
HapII CCGG 3 cut(s) 207, 1108, 1202
HgaI GACGC 1 cut(s) 86
HhaI GCGC 1 cut(s) 833
Hin1II CATG 6 cut(s) 33, 270, 799, 953, 1139, 1201
Hin6I GCGC 1 cut(s) 831
HinP1I GCGC 1 cut(s) 831
HincII GTYRAC 1 cut(s) 139
HindII GTYRAC 1 cut(s) 139
HinfI GANTC 9 cut(s) 49, 155, 497, 562, 740, 858, 1189, 1288, 1306
HpaI GTTAAC 1 cut(s) 139
HpaII CCGG 3 cut(s) 207, 1108, 1202
HphI GGTGA 4 cut(s) 163, 175, 286, 1198
Hpy166II GTNNAC 2 cut(s) 139, 1339
Hpy188III TCNNGA 9 cut(s) 129, 287, 392, 452, 523, 851, 862, 1000, 1064
Hpy8I GTNNAC 2 cut(s) 139, 1339
Hpy99I CGWCG 1 cut(s) 102
HpyAV CCTTC 4 cut(s) 65, 90, 303, 449
HpyCH4III ACNGT 7 cut(s) 758, 918, 934, 1129, 1159, 1230, 1299
HpyCH4IV ACGT 2 cut(s) 585, 814
HpyCH4V TGCA 2 cut(s) 911, 1037
HpyF10VI GCNNNNNNNGC 3 cut(s) 113, 207, 230
HpyF3I CTNAG 8 cut(s) 162, 237, 260, 612, 638, 671, 1251, 1302
HpySE526I ACGT 2 cut(s) 585, 814
Hsp92II CATG 6 cut(s) 33, 270, 799, 953, 1139, 1201
HspAI GCGC 1 cut(s) 831
Ksp22I TGATCA 1 cut(s) 342
KspAI GTTAAC 1 cut(s) 139
Kzo9I GATC 3 cut(s) 342, 847, 944
LguI GCTCTTC 1 cut(s) 465
LmnI GCTCC 2 cut(s) 209, 1325
Lsp1109I GCAGC 2 cut(s) 116, 895
LweI GCATC 2 cut(s) 412, 1046
MaeI CTAG 4 cut(s) 129, 371, 392, 476
MaeII ACGT 2 cut(s) 585, 814
MaeIII GTNAC 3 cut(s) 181, 1186, 1354
MalI GATC 3 cut(s) 344, 849, 946
MbiI CCGCTC 1 cut(s) 236
MboI GATC 3 cut(s) 342, 847, 944
MboII GAAGA 8 cut(s) 12, 117, 150, 482, 614, 700, 966, 969
MflI RGATCY 2 cut(s) 847, 944
MhlI GDGCHC 2 cut(s) 261, 1257
MluCI AATT 7 cut(s) 16, 176, 302, 591, 1077, 1096, 1181
MlyI GAGTC 2 cut(s) 749, 1183
MmeI TCCRAC 2 cut(s) 445, 1300
MnlI CCTC 8 cut(s) 317, 408, 519, 607, 696, 1235, 1238, 1316
MroXI GAANNNNTTC 1 cut(s) 621
MseI TTAA 5 cut(s) 138, 402, 432, 903, 1259
MslI CAYNNNNRTG 1 cut(s) 383
MspA1I CMGCKG 3 cut(s) 152, 224, 409
MspI CCGG 3 cut(s) 207, 1108, 1202
MspR9I CCNGG 4 cut(s) 91, 489, 1109, 1203
MvaI CCWGG 2 cut(s) 91, 489
MwoI GCNNNNNNNGC 3 cut(s) 113, 207, 230
NciI CCSGG 2 cut(s) 1109, 1203
NcoI CCATGG 1 cut(s) 1135
NdeII GATC 3 cut(s) 342, 847, 944
NlaIII CATG 6 cut(s) 33, 270, 799, 953, 1139, 1201
NlaIV GGNNCC 4 cut(s) 205, 882, 1141, 1274
NmeAIII GCCGAG 1 cut(s) 709
NmuCI GTSAC 3 cut(s) 181, 1186, 1354
NspI RCATGY 2 cut(s) 33, 270
PaeR7I CTCGAG 1 cut(s) 521
PciI ACATGT 1 cut(s) 266
PciSI GCTCTTC 1 cut(s) 465
PdmI GAANNNNTTC 1 cut(s) 621
PfeI GAWTC 7 cut(s) 49, 155, 497, 562, 858, 1288, 1306
Pfl23II CGTACG 1 cut(s) 68
PfoI TCCNGGA 2 cut(s) 89, 1107
PkrI GCNGC 7 cut(s) 106, 118, 151, 203, 223, 235, 910
PleI GAGTC 2 cut(s) 748, 1183
PpsI GAGTC 2 cut(s) 748, 1183
PscI ACATGT 1 cut(s) 266
PshAI GACNNNNGTC 1 cut(s) 1344
PsiI TTATAA 1 cut(s) 590
Psp124BI GAGCTC 1 cut(s) 1257
Psp1406I AACGTT 1 cut(s) 814
Psp6I CCWGG 2 cut(s) 89, 487
PspFI CCCAGC 2 cut(s) 254, 1268
PspGI CCWGG 2 cut(s) 89, 487
PspLI CGTACG 1 cut(s) 68
PspN4I GGNNCC 4 cut(s) 205, 882, 1141, 1274
PspPI GGNCC 4 cut(s) 880, 1087, 1140, 1273
PsuI RGATCY 2 cut(s) 847, 944
PvuII CAGCTG 1 cut(s) 409
RsaI GTAC 5 cut(s) 70, 265, 483, 931, 936
RsaNI GTAC 5 cut(s) 69, 264, 482, 930, 935
RseI CAYNNNNRTG 1 cut(s) 383
SacI GAGCTC 1 cut(s) 1257
SapI GCTCTTC 1 cut(s) 465
SaqAI TTAA 5 cut(s) 138, 402, 432, 903, 1259
SatI GCNGC 7 cut(s) 105, 117, 150, 202, 222, 234, 909
Sau3AI GATC 3 cut(s) 342, 847, 944
Sau96I GGNCC 4 cut(s) 880, 1087, 1140, 1273
ScaI AGTACT 1 cut(s) 483
SchI GAGTC 2 cut(s) 749, 1183
ScrFI CCNGG 4 cut(s) 91, 489, 1109, 1203
SduI GDGCHC 2 cut(s) 261, 1257
SfaNI GCATC 2 cut(s) 412, 1046
Sfr274I CTCGAG 1 cut(s) 521
SinI GGWCC 4 cut(s) 880, 1087, 1140, 1273
SlaI CTCGAG 1 cut(s) 521
SmiMI CAYNNNNRTG 1 cut(s) 383
SmlI CTYRAG 2 cut(s) 34, 521
SmoI CTYRAG 2 cut(s) 34, 521
Sse9I AATT 7 cut(s) 16, 176, 302, 591, 1077, 1096, 1181
SsiI CCGC 8 cut(s) 116, 147, 150, 201, 219, 222, 234, 1363
SspMI CTAG 4 cut(s) 129, 371, 392, 476
SstI GAGCTC 1 cut(s) 1257
StyD4I CCNGG 4 cut(s) 89, 487, 1107, 1201
StyI CCWWGG 3 cut(s) 310, 442, 1135
TaaI ACNGT 7 cut(s) 758, 918, 934, 1129, 1159, 1230, 1299
TaiI ACGT 2 cut(s) 588, 817
TaqI TCGA 4 cut(s) 100, 427, 522, 774
TasI AATT 7 cut(s) 16, 176, 302, 591, 1077, 1096, 1181
TatI WGTACW 4 cut(s) 263, 481, 929, 934
TauI GCSGC 5 cut(s) 119, 152, 204, 224, 236
TfiI GAWTC 7 cut(s) 49, 155, 497, 562, 858, 1288, 1306
Tru1I TTAA 5 cut(s) 138, 402, 432, 903, 1259
Tru9I TTAA 5 cut(s) 138, 402, 432, 903, 1259
TscAI CASTG 2 cut(s) 616, 1026
TseFI GTSAC 3 cut(s) 181, 1186, 1354
TseI GCWGC 2 cut(s) 104, 908
Tsp45I GTSAC 3 cut(s) 181, 1186, 1354
TspDTI ATGAA 3 cut(s) 761, 1186, 1280
TspGWI ACGGA 2 cut(s) 86, 705
TspRI CASTG 2 cut(s) 616, 1026
VpaK11BI GGWCC 4 cut(s) 880, 1087, 1140, 1273
XapI RAATTY 4 cut(s) 176, 302, 1077, 1096
XbaI TCTAGA 2 cut(s) 128, 391
XceI RCATGY 2 cut(s) 33, 270
XhoI CTCGAG 1 cut(s) 521
XmnI GAANNNNTTC 1 cut(s) 621
XspI CTAG 4 cut(s) 129, 371, 392, 476
ZrmI AGTACT 1 cut(s) 483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.