Prupe.1G304300_v2.0.a1

protein At1g26090, chloroplastic

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
29816587 .. 29819820
3234 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G304300.2

Sequence Viewer

Length: 1380 bp
ATGGCTTTGCCTCTCCTTCCAAATACCGTCTCTTTTTCCCTTCTTACAACACCGCCGAAGGTACCTAGAAGTGGAACAAGAACAAGATTTGCAAGGCACCGCCGATTTCTGGCCTTGGCGGCTTCTCCGGAGTCAAAGGATGACAAGACTGCTTCTTCTCAGAAATCAACAAAGTTGGTCACTTTTTTGGGGAAAGGTGGCTCCGGCAAGACCACCTCCGCCGTTTTCGCTGCCCAGCATTTTGCAATGGCAGGGTTTAGCACATGCTTGGTGATACACACCCAAGATCCCACTGCTGAGTTCTTTCTAAACTGCAAAATCGGAAGTTCTCCTACACTATGCAACAGCAACCTTTCGGCTCTTAGATTTGAAACCACCCAAATGCTTCTAGGACCTCTGAAAGAGCTAAAGCAAGTGGATGCTCGTCTTAATACGACACAAGGGGTTCTTGAAGGGATAGTGGGAGAAGAGCTTGGGGTGCTTCCTGGGATGGATCCTATTTTTTCCACGTTAGCACTTGAGAGGCTTGTTGGATTCTTTAGGAATGTGGCCCAAAGAAACCACAACAAAGATAAATTTGATGTAATAGTATATGATGGTCTGAGCTCTGATGAAATGCTACGAATGATTAGTGCAGGCAGTAAAGCAAGGTTATACTTGAAATATCTGCGTAATGCAGCTGAGAAAACTGATATTGGGAGGTTGGCGGGTCCTTCAGTTTTGAGGCTTGTGGATGAAGCCATGAGTATAAGCAGCAGTACAACCCATCGCAATGGGAAAATGAGCACAGAAATATGGGACATTCTGGAACAAATGTTGGAGAGAGGGTCGTCTGCTTTCTCAGAACCTCAGAAATTTGGCTGCTACCTAGTGATTGACCCAGACAACCCAGCATCTGTTGCTACTGCTTTACGTTATTGGGGTTGCTCAATCCAAGCCGGTGCACAGGTCTCCGGAGCCTTTGCGATTGCATCACGACATGTGAACACAGAATCAGAGGAAAGACTCAAGAAAACCTTTTCACCCTTGCCTTTTGCTTTCATTCCACATCTCCCCTTTGGTTCCCCTCTAGATTGGAATGCGATCATACCGAACAGTGTCAATGAAAATGCACGGAATCTTCTTTCTTTGCCAGCAAGTGGCAGCAGTAGTGTAACACCCTCAGTGAAGTTCGATGCAGCCAGAAAATCAGTAACCCTTTTCATGCCAGGTTTTGACAAGTCAGAGGTCAAGCTGTACCAATATAGGGGAGGATCTGAGTTGTTGGTGGAAGCAGGGGATCAAAGACGTGTAATTCAGCTGCCTTCTAAAATTCAAGGGAAAGTTGGAGGTGCCAAGTTCAATATCATGGACAGAAGTCTTGTAATCACAATGCGATAG

Protein Analysis

460

Amino Acids

50.05

Weight (kDa)

9.51

Isoelectric Point (pI)

39.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 61
AccB1I GGYRCC 3 cut(s) 61, 96, 1331
AccB7I CCANNNNNTGG 1 cut(s) 1139
AccIII TCCGGA 2 cut(s) 127, 953
AciI CCGC 5 cut(s) 53, 100, 119, 219, 707
AclWI GGATC 5 cut(s) 281, 488, 501, 1261, 1287
AcsI RAATTY 3 cut(s) 575, 854, 1311
AcuI CTGAAG 1 cut(s) 699
AfaI GTAC 3 cut(s) 63, 760, 1238
AfiI CCNNNNNNNGG 4 cut(s) 71, 109, 1139, 1246
AflIII ACRYGT 2 cut(s) 979, 1288
AgsI TTSAA 5 cut(s) 371, 452, 661, 1316, 1342
AjiI CACGTC 1 cut(s) 1289
AjnI CCWGG 2 cut(s) 484, 1207
AluBI AGCT 6 cut(s) 406, 472, 606, 680, 1234, 1300
AluI AGCT 6 cut(s) 406, 472, 606, 680, 1234, 1300
Alw21I GWGCWC 3 cut(s) 608, 788, 946
Alw26I GTCTC 2 cut(s) 34, 955
Alw44I GTGCAC 1 cut(s) 942
AlwI GGATC 5 cut(s) 281, 488, 501, 1261, 1287
AlwNI CAGNNNCTG 1 cut(s) 896
Aor13HI TCCGGA 2 cut(s) 127, 953
AoxI GGCC 2 cut(s) 111, 549
ApaLI GTGCAC 1 cut(s) 942
ApeKI GCWGC 7 cut(s) 230, 677, 753, 861, 1143, 1178, 1300
ApoI RAATTY 3 cut(s) 575, 854, 1311
Asp718I GGTACC 1 cut(s) 61
AspS9I GGNCC 3 cut(s) 392, 550, 710
AsuHPI GGTGA 2 cut(s) 283, 1014
AvaII GGWCC 2 cut(s) 392, 710
BaeGI GKGCMC 1 cut(s) 946
BamHI GGATCC 1 cut(s) 493
BanI GGYRCC 3 cut(s) 61, 96, 1331
BanII GRGCYC 1 cut(s) 608
BarI GAAGNNNNNNTAC 2 cut(s) 316, 348
Bbv12I GWGCWC 3 cut(s) 608, 788, 946
BbvI GCAGC 7 cut(s) 217, 689, 765, 848, 1155, 1190, 1287
BccI CCATC 3 cut(s) 484, 590, 774
BceAI ACGGC 1 cut(s) 206
BciT130I CCWGG 2 cut(s) 486, 1209
BcoDI GTCTC 2 cut(s) 34, 955
BfaI CTAG 4 cut(s) 66, 389, 869, 1070
BglI GCCNNNNNGGC 1 cut(s) 119
BisI GCNGC 8 cut(s) 120, 231, 678, 754, 862, 1144, 1179, 1301
BlsI GCNGC 8 cut(s) 121, 232, 679, 755, 863, 1145, 1180, 1302
Bme1390I CCNGG 2 cut(s) 486, 1209
Bme18I GGWCC 2 cut(s) 392, 710
BmgBI CACGTC 1 cut(s) 1289
BmgT120I GGNCC 3 cut(s) 392, 550, 710
BmiI GGNNCC 8 cut(s) 63, 98, 202, 495, 711, 958, 1063, 1333
BmrFI CCNGG 2 cut(s) 486, 1209
BmsI GCATC 4 cut(s) 409, 902, 980, 1165
BoxI GACNNNNGTC 1 cut(s) 1356
BpuEI CTTGAG 2 cut(s) 539, 992
BsaI GGTCTC 1 cut(s) 955
BsaJI CCNNGG 2 cut(s) 114, 485
BsaWI WCCGGW 2 cut(s) 127, 953
BsaXI ACNNNNNCTCC 2 cut(s) 812, 842
Bsc4I CCNNNNNNNGG 4 cut(s) 71, 109, 1139, 1246
Bse118I RCCGGY 1 cut(s) 938
Bse3DI GCAATG 2 cut(s) 252, 778
BseAI TCCGGA 2 cut(s) 127, 953
BseBI CCWGG 2 cut(s) 486, 1209
BseDI CCNNGG 2 cut(s) 114, 485
BseGI GGATG 4 cut(s) 145, 424, 495, 739
BseLI CCNNNNNNNGG 4 cut(s) 71, 109, 1139, 1246
BseMI GCAATG 2 cut(s) 252, 778
BseMII CTCAG 8 cut(s) 173, 288, 593, 672, 855, 863, 1176, 1248
BseSI GKGCMC 1 cut(s) 946
BseXI GCAGC 7 cut(s) 217, 689, 765, 848, 1155, 1190, 1287
BseYI CCCAGC 2 cut(s) 234, 889
BsgI GTGCAG 1 cut(s) 654
BshFI GGCC 2 cut(s) 113, 551
BshNI GGYRCC 3 cut(s) 61, 96, 1331
BsiHKAI GWGCWC 3 cut(s) 608, 788, 946
BsiSI CCGG 4 cut(s) 128, 204, 939, 954
BslFI GGGAC 1 cut(s) 812
BslI CCNNNNNNNGG 4 cut(s) 71, 109, 1139, 1246
BsmAI GTCTC 2 cut(s) 34, 955
BsmBI CGTCTC 1 cut(s) 34
BsmFI GGGAC 1 cut(s) 812
BsmI GAATGC 1 cut(s) 1084
BsnI GGCC 2 cut(s) 113, 551
Bso31I GGTCTC 1 cut(s) 955
Bsp1286I GDGCHC 3 cut(s) 608, 788, 946
Bsp13I TCCGGA 2 cut(s) 127, 953
Bsp143I GATC 5 cut(s) 286, 493, 1083, 1253, 1279
BspACI CCGC 5 cut(s) 53, 100, 119, 219, 707
BspANI GGCC 2 cut(s) 113, 551
BspCNI CTCAG 8 cut(s) 172, 289, 594, 673, 854, 862, 1175, 1249
BspEI TCCGGA 2 cut(s) 127, 953
BspLI GGNNCC 8 cut(s) 63, 98, 202, 495, 711, 958, 1063, 1333
BspPI GGATC 5 cut(s) 281, 488, 501, 1261, 1287
BspQI GCTCTTC 1 cut(s) 462
BspT107I GGYRCC 3 cut(s) 61, 96, 1331
BspTNI GGTCTC 1 cut(s) 955
BsrDI GCAATG 2 cut(s) 252, 778
BsrFI RCCGGY 1 cut(s) 938
BssAI RCCGGY 1 cut(s) 938
BssECI CCNNGG 2 cut(s) 114, 485
BssMI GATC 5 cut(s) 286, 493, 1083, 1253, 1279
BssT1I CCWWGG 1 cut(s) 114
Bst2UI CCWGG 2 cut(s) 486, 1209
Bst4CI ACNGT 2 cut(s) 28, 1097
Bst6I CTCTTC 1 cut(s) 462
BstAPI GCANNNNNTGC 1 cut(s) 899
BstC8I GCNNGC 2 cut(s) 637, 1134
BstDEI CTNAG 9 cut(s) 159, 297, 362, 602, 681, 841, 849, 1162, 1257
BstF5I GGATG 4 cut(s) 145, 424, 495, 739
BstKTI GATC 5 cut(s) 289, 496, 1086, 1256, 1282
BstMAI GTCTC 2 cut(s) 34, 955
BstMBI GATC 5 cut(s) 286, 493, 1083, 1253, 1279
BstMWI GCNNNNNNNGC 4 cut(s) 119, 227, 478, 899
BstNI CCWGG 2 cut(s) 486, 1209
BstNSI RCATGY 2 cut(s) 267, 983
BstPAI GACNNNNGTC 1 cut(s) 1356
BstSCI CCNGG 2 cut(s) 484, 1207
BstSLI GKGCMC 1 cut(s) 946
BstV1I GCAGC 7 cut(s) 217, 689, 765, 848, 1155, 1190, 1287
BstX2I RGATCY 3 cut(s) 286, 493, 1253
BstXI CCANNNNNNTGG 1 cut(s) 773
BstYI RGATCY 3 cut(s) 286, 493, 1253
BsuRI GGCC 2 cut(s) 113, 551
BtgZI GCGATG 1 cut(s) 752
BtrI CACGTC 1 cut(s) 1289
BtsCI GGATG 4 cut(s) 145, 424, 495, 739
BtsI GCAGTG 1 cut(s) 291
BtsIMutI CAGTG 3 cut(s) 291, 1102, 1170
Cac8I GCNNGC 2 cut(s) 637, 1134
CaiI CAGNNNCTG 1 cut(s) 896
Cfr10I RCCGGY 1 cut(s) 938
Cfr13I GGNCC 3 cut(s) 392, 550, 710
Csp6I GTAC 3 cut(s) 62, 759, 1237
CviAII CATG 5 cut(s) 264, 742, 980, 1204, 1348
CviQI GTAC 3 cut(s) 62, 759, 1237
DdeI CTNAG 9 cut(s) 159, 297, 362, 602, 681, 841, 849, 1162, 1257
DpnI GATC 5 cut(s) 288, 495, 1085, 1255, 1281
DpnII GATC 5 cut(s) 286, 493, 1083, 1253, 1279
Eam1104I CTCTTC 1 cut(s) 462
EarI CTCTTC 1 cut(s) 462
EciI GGCGGA 1 cut(s) 208
Ecl136II GAGCTC 1 cut(s) 606
Eco130I CCWWGG 1 cut(s) 114
Eco24I GRGCYC 1 cut(s) 608
Eco31I GGTCTC 1 cut(s) 955
Eco47I GGWCC 2 cut(s) 392, 710
Eco53kI GAGCTC 1 cut(s) 606
Eco57I CTGAAG 1 cut(s) 699
EcoICRI GAGCTC 1 cut(s) 606
EcoO109I RGGNCCY 2 cut(s) 392, 710
EcoRII CCWGG 2 cut(s) 484, 1207
EcoT14I CCWWGG 1 cut(s) 114
EcoT38I GRGCYC 1 cut(s) 608
ErhI CCWWGG 1 cut(s) 114
Esp3I CGTCTC 1 cut(s) 34
FaeI CATG 5 cut(s) 267, 745, 983, 1207, 1351
FalI AAGNNNNNCTT 4 cut(s) 432, 464, 1001, 1033
FaqI GGGAC 1 cut(s) 812
FatI CATG 5 cut(s) 263, 741, 979, 1203, 1347
FauI CCCGC 1 cut(s) 700
Fnu4HI GCNGC 8 cut(s) 120, 231, 678, 754, 862, 1144, 1179, 1301
FokI GGATG 4 cut(s) 152, 431, 502, 746
FriOI GRGCYC 1 cut(s) 608
Fsp4HI GCNGC 8 cut(s) 120, 231, 678, 754, 862, 1144, 1179, 1301
FspBI CTAG 4 cut(s) 66, 389, 869, 1070
GluI GCNGC 8 cut(s) 120, 231, 678, 754, 862, 1144, 1179, 1301
GsaI CCCAGC 2 cut(s) 238, 893
HaeIII GGCC 2 cut(s) 113, 551
HapII CCGG 4 cut(s) 128, 204, 939, 954
Hin1II CATG 5 cut(s) 267, 745, 983, 1207, 1351
HinfI GANTC 5 cut(s) 131, 534, 992, 1005, 1117
HpaII CCGG 4 cut(s) 128, 204, 939, 954
HphI GGTGA 2 cut(s) 283, 1014
Hpy166II GTNNAC 2 cut(s) 944, 985
Hpy188III TCNNGA 7 cut(s) 128, 449, 806, 954, 975, 1009, 1070
Hpy8I GTNNAC 2 cut(s) 944, 985
HpyAV CCTTC 6 cut(s) 26, 50, 52, 446, 723, 1314
HpyCH4III ACNGT 2 cut(s) 28, 1097
HpyCH4IV ACGT 3 cut(s) 509, 913, 1288
HpyF10VI GCNNNNNNNGC 4 cut(s) 119, 227, 478, 899
HpyF3I CTNAG 9 cut(s) 159, 297, 362, 602, 681, 841, 849, 1162, 1257
HpySE526I ACGT 3 cut(s) 509, 913, 1288
Hsp92II CATG 5 cut(s) 267, 745, 983, 1207, 1351
Kpn2I TCCGGA 2 cut(s) 127, 953
KpnI GGTACC 1 cut(s) 65
Kzo9I GATC 5 cut(s) 286, 493, 1083, 1253, 1279
LguI GCTCTTC 1 cut(s) 462
LmnI GCTCC 2 cut(s) 206, 956
Lsp1109I GCAGC 7 cut(s) 217, 689, 765, 848, 1155, 1190, 1287
LweI GCATC 4 cut(s) 409, 902, 980, 1165
MaeI CTAG 4 cut(s) 66, 389, 869, 1070
MaeII ACGT 3 cut(s) 509, 913, 1288
MaeIII GTNAC 3 cut(s) 178, 1153, 1192
MalI GATC 5 cut(s) 288, 495, 1085, 1255, 1281
MboI GATC 5 cut(s) 286, 493, 1083, 1253, 1279
MboII GAAGA 3 cut(s) 147, 479, 1112
MflI RGATCY 3 cut(s) 286, 493, 1253
MhlI GDGCHC 3 cut(s) 608, 788, 946
MluCI AATT 4 cut(s) 575, 854, 1293, 1311
MlyI GAGTC 2 cut(s) 140, 999
MmeI TCCRAC 3 cut(s) 511, 798, 1306
MroI TCCGGA 2 cut(s) 127, 953
MseI TTAA 1 cut(s) 429
MslI CAYNNNNRTG 2 cut(s) 380, 771
MspA1I CMGCKG 2 cut(s) 680, 1300
MspI CCGG 4 cut(s) 128, 204, 939, 954
MspR9I CCNGG 2 cut(s) 486, 1209
Mva1269I GAATGC 1 cut(s) 1084
MvaI CCWGG 2 cut(s) 486, 1209
MwoI GCNNNNNNNGC 4 cut(s) 119, 227, 478, 899
NdeII GATC 5 cut(s) 286, 493, 1083, 1253, 1279
NlaIII CATG 5 cut(s) 267, 745, 983, 1207, 1351
NlaIV GGNNCC 8 cut(s) 63, 98, 202, 495, 711, 958, 1063, 1333
NmuCI GTSAC 1 cut(s) 178
NspI RCATGY 2 cut(s) 267, 983
PciI ACATGT 1 cut(s) 979
PciSI GCTCTTC 1 cut(s) 462
PctI GAATGC 1 cut(s) 1084
PfeI GAWTC 3 cut(s) 534, 992, 1117
PflMI CCANNNNNTGG 1 cut(s) 1139
PkrI GCNGC 8 cut(s) 121, 232, 679, 755, 863, 1145, 1180, 1302
PleI GAGTC 2 cut(s) 139, 999
PpsI GAGTC 2 cut(s) 139, 999
PpuMI RGGWCCY 2 cut(s) 392, 710
PscI ACATGT 1 cut(s) 979
PshAI GACNNNNGTC 1 cut(s) 1356
Psp124BI GAGCTC 1 cut(s) 608
Psp5II RGGWCCY 2 cut(s) 392, 710
Psp6I CCWGG 2 cut(s) 484, 1207
PspFI CCCAGC 2 cut(s) 234, 889
PspGI CCWGG 2 cut(s) 484, 1207
PspN4I GGNNCC 8 cut(s) 63, 98, 202, 495, 711, 958, 1063, 1333
PspPI GGNCC 3 cut(s) 392, 550, 710
PspPPI RGGWCCY 2 cut(s) 392, 710
PstNI CAGNNNCTG 1 cut(s) 896
PsuI RGATCY 3 cut(s) 286, 493, 1253
PvuII CAGCTG 2 cut(s) 680, 1300
RsaI GTAC 3 cut(s) 63, 760, 1238
RsaNI GTAC 3 cut(s) 62, 759, 1237
RseI CAYNNNNRTG 2 cut(s) 380, 771
SacI GAGCTC 1 cut(s) 608
SapI GCTCTTC 1 cut(s) 462
SaqAI TTAA 1 cut(s) 429
SatI GCNGC 8 cut(s) 120, 231, 678, 754, 862, 1144, 1179, 1301
Sau3AI GATC 5 cut(s) 286, 493, 1083, 1253, 1279
Sau96I GGNCC 3 cut(s) 392, 550, 710
SchI GAGTC 2 cut(s) 140, 999
ScrFI CCNGG 2 cut(s) 486, 1209
SduI GDGCHC 3 cut(s) 608, 788, 946
SfaNI GCATC 4 cut(s) 409, 902, 980, 1165
SinI GGWCC 2 cut(s) 392, 710
SmiMI CAYNNNNRTG 2 cut(s) 380, 771
SmlI CTYRAG 2 cut(s) 518, 1007
SmoI CTYRAG 2 cut(s) 518, 1007
Sse9I AATT 4 cut(s) 575, 854, 1293, 1311
SsiI CCGC 5 cut(s) 53, 100, 119, 219, 707
SspMI CTAG 4 cut(s) 66, 389, 869, 1070
SstI GAGCTC 1 cut(s) 608
StyD4I CCNGG 2 cut(s) 484, 1207
StyI CCWWGG 1 cut(s) 114
TaaI ACNGT 2 cut(s) 28, 1097
TaiI ACGT 3 cut(s) 512, 916, 1291
TaqI TCGA 1 cut(s) 1173
TasI AATT 4 cut(s) 575, 854, 1293, 1311
TatI WGTACW 1 cut(s) 758
TauI GCSGC 1 cut(s) 122
TfiI GAWTC 3 cut(s) 534, 992, 1117
Tru1I TTAA 1 cut(s) 429
Tru9I TTAA 1 cut(s) 429
TscAI CASTG 3 cut(s) 298, 1102, 1170
TseFI GTSAC 1 cut(s) 178
TseI GCWGC 7 cut(s) 230, 677, 753, 861, 1143, 1178, 1300
Tsp45I GTSAC 1 cut(s) 178
TspDTI ATGAA 5 cut(s) 627, 750, 1030, 1119, 1192
TspGWI ACGGA 1 cut(s) 1129
TspRI CASTG 3 cut(s) 298, 1102, 1170
Van91I CCANNNNNTGG 1 cut(s) 1139
VneI GTGCAC 1 cut(s) 942
VpaK11BI GGWCC 2 cut(s) 392, 710
XapI RAATTY 3 cut(s) 575, 854, 1311
XbaI TCTAGA 1 cut(s) 1069
XceI RCATGY 2 cut(s) 267, 983
XspI CTAG 4 cut(s) 66, 389, 869, 1070
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.