AT1G26190

phosphoribulokinase uridine kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
9057095 .. 9061140
4046 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G26190.3

Sequence Viewer

Length: 2025 bp
ATGGGTCAAGACAGCAATGGAATTGAGTTTCATCAGAAGAGACATGGTCTCTTGAAGGATCAAGTCCAATTGGTTAAGAGAAGAGACTCTATTCGGTATGAAATTGTTTCTATTCAAGATCGGTTGTCATTTGAGAAGGGCTTCTTTGCGGTTATCCGTGCTTGCCAATTGCTTTCTCAGAAGAATGATGGGATCATATTGGTTGGTGTTGCTGGACCTTCTGGTGCTGGAAAGACTGTATTCACTGAGAAGATACTCAATTTTCTGCCAAGTGTTGCTGTCATTTCAATGGACAATTATAATGATTCTAGTCGGATTGTTGATGGGAACTTTGATGATCCACGGTTAACGGACTATGACACATTGCTCAAGAATCTTGAAGACTTAAAGGAAGGAAAGCAGGTTGAGGTTCCTATTTATGATTTTAAGTCCAGCTCTCGTGTTGGATACAGGACCCTTGATGTCCCACCTTCTCGGATTGTGATTATTGAAGGAATCTATGCTTTGAGTGAAAAACTGCGACCTTTATTGGATCTTCGTGTGTCTGTTACTGGTGGAGTTCATTTTGACCTTGTTAAACGGGTTCTCCGTGATATACAACGTGCAGGTCAACAGCCAGAGGAGATTATCCATCAGATATCTGAAACAGTATACCCGATGTACAAAGCTTTCATTGAGCCAGATCTCCAGACTGCTCAAATCAAAATCATTAATAAATTCAACCCCTTCACTGGTTTTCAGAGCCCGACTTACATCTTGAAGTCAAGAAAGGAGGTATCTGTTGATCAGATCAAGGCGGTCCTTTCTGATGGACATACAGAGACTAAGGAGGAGACCTATGATATATATCTTCTTCCTCCGGGTGAAGATCCAGAGTCGTGCCAATCATATTTGAGGATGCGGAATAAAGATGGAAAGTACAGCCTTATGTTTGAGGAATGGGTTACGGATACTCCTTTTGTCATATCCCCAAGGATTACATTTGAAGTCAGTGTTCGCCTACTTGGTGGGCTCATGGCATTGGGATACACAATAGCAACTATACTTAAAAGGAACAGCCATGTATTTGCTACTGATAAGGTGTTTGTGAAAATCGATTGGCTTGAGCAACTGAATCGTCACTACATGCAGGTGCAAGGTAAAGATCGGCAACTTGTACAGAGTACTGCAGAGCAGCTAGGATTGGAAGGATCGTTCATTCCACGCACCTATATTGAACAGATCCAACTCGAAAAACTAATAAATGAAGTAATGGCCCTACCAGATGATCTAAAGAACAAGCTTAGCTTAGATGAGGATTTGGTGTCTAGTTCAAGCCCTAAGGAAGCACTCTTACGAGCGTCTGCAGATAGAGTAGCCATGAGAAATAAGAACCTCAAAAGAGGCATGTCACACTCATATTCAACCCAAAGAGATAAGAATCTGTCCAAGCTTGCTGGTTATTCTTCAAGCGATAGGAGGTACGAAGAAAGAAATCACGACTCGCCAGCGAACGAGGGGTTTATGACTCTGCTTTCAGAACAAATATCATCTCTCAACGAGAGAATGGATGAGTTCACAAGTCGAATTGAAGAGCTCAATTCAAAGTTGAGCTGCAATAAAAACTCTCCAACACAGCAGAGCTTGTCAATCCAAACCGAAGTCTGCAATGGGTCAGCTCCTACTTCGTATTTCATTTCTGGTCTGGACAATGGCTGCTTGACAAATTCCATAATGCCCCATTCATCATCCTCCTCCCAACTAGCCAAGGATTCACCCTTAATGGAAGAGATATCGACCATATCACGAGGACAGCGTCAAGTTATGCATCAGTTGGATAATTTGTGCAATCTGATGAGGGAAAGCTCAGCAGAAAGGTCACGCCTAGCAAGAACAGGGAGCAGCAATAGCGGTAACAGAGGCAGATCAAGCAAAAGCTCCTTCTTGTCCAATGTGGAATCTAACAAGCTCCCTCTTGTGTTAACCGTGGCTATTTGCAGCATAGGTATTATAGTGATCAAGAGCTACATTAACAAGCGGCAATAA

Protein Analysis

674

Amino Acids

76.01

Weight (kDa)

7.59

Isoelectric Point (pI)

52.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PRK PF00485 68 - 236 1.5e-26 Phosphoribulokinase / Uridine kinase family
CYTH PF01928 250 - 404 3.4e-25 CYTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 300
AarI CACCTGC 1 cut(s) 1120
Acc36I ACCTGC 3 cut(s) 391, 596, 1120
AccI GTMKAC 1 cut(s) 651
AciI CCGC 5 cut(s) 149, 797, 901, 1890, 2017
AclWI GGATC 7 cut(s) 66, 200, 332, 540, 863, 1198, 1216
AcsI RAATTY 2 cut(s) 716, 1705
AfaI GTAC 5 cut(s) 662, 920, 1158, 1165, 1463
AfiI CCNNNNNNNGG 1 cut(s) 731
AloI GAACNNNNNNTCC 2 cut(s) 1178, 1210
Alw21I GWGCWC 1 cut(s) 1578
Alw26I GTCTC 5 cut(s) 34, 53, 78, 815, 827
AlwI GGATC 7 cut(s) 66, 200, 332, 540, 863, 1198, 1216
AoxI GGCC 1 cut(s) 1254
ApeKI GCWGC 5 cut(s) 1174, 1593, 1695, 1881, 1977
ApoI RAATTY 2 cut(s) 716, 1705
AseI ATTAAT 1 cut(s) 711
Asp700I GAANNNNTTC 1 cut(s) 140
AspS9I GGNCC 4 cut(s) 215, 453, 799, 1255
AsuC2I CCSGG 1 cut(s) 861
AsuHPI GGTGA 2 cut(s) 875, 1746
AvaII GGWCC 3 cut(s) 215, 453, 799
AxyI CCTNAGG 1 cut(s) 1320
BanII GRGCYC 3 cut(s) 746, 1014, 1578
BarI GAAGNNNNNNTAC 2 cut(s) 1317, 1349
BauI CACGAG 2 cut(s) 438, 1785
BbsI GAAGAC 1 cut(s) 387
Bbv12I GWGCWC 1 cut(s) 1578
BbvI GCAGC 5 cut(s) 1186, 1580, 1682, 1893, 1989
BccI CCATC 5 cut(s) 182, 317, 639, 803, 905
BcgI CGANNNNNNTGC 2 cut(s) 1097, 1131
BciVI GTATCC 3 cut(s) 440, 943, 1019
BclI TGATCA 2 cut(s) 784, 1995
BcnI CCSGG 1 cut(s) 861
BcoDI GTCTC 5 cut(s) 34, 53, 78, 815, 827
BfaI CTAG 5 cut(s) 309, 1178, 1308, 1742, 1865
BfmI CTRYAG 2 cut(s) 1167, 1344
BfuAI ACCTGC 3 cut(s) 391, 596, 1120
BfuI GTATCC 3 cut(s) 440, 943, 1019
BglII AGATCT 1 cut(s) 682
BisI GCNGC 6 cut(s) 1175, 1594, 1696, 1882, 1978, 2018
BlpI GCTNAGC 2 cut(s) 1283, 1846
BlsI GCNGC 6 cut(s) 1176, 1595, 1697, 1883, 1979, 2019
BmcAI AGTACT 1 cut(s) 1165
Bme1390I CCNGG 1 cut(s) 861
Bme18I GGWCC 3 cut(s) 215, 453, 799
BmgT120I GGNCC 4 cut(s) 215, 453, 799, 1255
BmiI GGNNCC 2 cut(s) 411, 455
BmrFI CCNGG 1 cut(s) 861
BmsI GCATC 2 cut(s) 888, 1816
BpiI GAAGAC 1 cut(s) 387
BpmI CTGGAG 1 cut(s) 671
Bpu1102I GCTNAGC 2 cut(s) 1283, 1846
BpuEI CTTGAG 2 cut(s) 353, 1124
BpuMI CCSGG 1 cut(s) 861
Bsa29I ATCGAT 1 cut(s) 1095
BsaBI GATNNNNATC 2 cut(s) 846, 1419
BsaI GGTCTC 2 cut(s) 53, 827
BsaJI CCNNGG 4 cut(s) 341, 971, 1746, 1965
BsaXI ACNNNNNCTCC 4 cut(s) 570, 600, 937, 967
Bsc4I CCNNNNNNNGG 1 cut(s) 731
Bse1I ACTGG 2 cut(s) 556, 736
Bse21I CCTNAGG 1 cut(s) 1320
Bse3DI GCAATG 3 cut(s) 22, 362, 1654
Bse8I GATNNNNATC 2 cut(s) 846, 1419
BseCI ATCGAT 1 cut(s) 1095
BseDI CCNNGG 4 cut(s) 341, 971, 1746, 1965
BseGI GGATG 3 cut(s) 903, 1555, 1727
BseJI GATNNNNATC 2 cut(s) 846, 1419
BseLI CCNNNNNNNGG 1 cut(s) 731
BseMI GCAATG 3 cut(s) 22, 362, 1654
BseMII CTCAG 3 cut(s) 191, 237, 1860
BseNI ACTGG 2 cut(s) 556, 736
BseRI GAGGAG 3 cut(s) 635, 845, 1723
BseXI GCAGC 5 cut(s) 1186, 1580, 1682, 1893, 1989
BsgI GTGCAG 1 cut(s) 624
BshFI GGCC 1 cut(s) 1256
BshVI ATCGAT 1 cut(s) 1095
BsiHKAI GWGCWC 1 cut(s) 1578
BsiSI CCGG 1 cut(s) 860
BslFI GGGAC 1 cut(s) 449
BslI CCNNNNNNNGG 1 cut(s) 731
BsmAI GTCTC 5 cut(s) 34, 53, 78, 815, 827
BsmFI GGGAC 1 cut(s) 449
BsnI GGCC 1 cut(s) 1256
Bso31I GGTCTC 2 cut(s) 53, 827
Bsp1286I GDGCHC 3 cut(s) 746, 1014, 1578
Bsp1407I TGTACA 2 cut(s) 660, 1156
Bsp1720I GCTNAGC 2 cut(s) 1283, 1846
BspACI CCGC 5 cut(s) 149, 797, 901, 1890, 2017
BspANI GGCC 1 cut(s) 1256
BspCNI CTCAG 3 cut(s) 190, 238, 1859
BspDI ATCGAT 1 cut(s) 1095
BspLI GGNNCC 2 cut(s) 411, 455
BspMAI CTGCAG 2 cut(s) 1171, 1348
BspMI ACCTGC 3 cut(s) 391, 596, 1120
BspPI GGATC 7 cut(s) 66, 200, 332, 540, 863, 1198, 1216
BspQI GCTCTTC 1 cut(s) 1566
BspTNI GGTCTC 2 cut(s) 53, 827
BsrDI GCAATG 3 cut(s) 22, 362, 1654
BsrGI TGTACA 2 cut(s) 660, 1156
BsrI ACTGG 2 cut(s) 556, 736
BssECI CCNNGG 4 cut(s) 341, 971, 1746, 1965
BssNAI GTATAC 1 cut(s) 652
BssSI CACGAG 2 cut(s) 438, 1785
BssT1I CCWWGG 2 cut(s) 971, 1746
Bst1107I GTATAC 1 cut(s) 652
Bst2BI CACGAG 2 cut(s) 438, 1785
Bst4CI ACNGT 4 cut(s) 238, 345, 649, 1966
Bst6I CTCTTC 4 cut(s) 32, 76, 1566, 1761
BstAUI TGTACA 2 cut(s) 660, 1156
BstC8I GCNNGC 3 cut(s) 163, 1434, 1488
BstDEI CTNAG 7 cut(s) 177, 246, 825, 1283, 1288, 1320, 1846
BstDSI CCRYGG 2 cut(s) 341, 1965
BstF5I GGATG 3 cut(s) 903, 1555, 1727
BstMAI GTCTC 5 cut(s) 34, 53, 78, 815, 827
BstMWI GCNNNNNNNGC 2 cut(s) 1887, 1908
BstNSI RCATGY 2 cut(s) 1129, 1390
BstSCI CCNGG 1 cut(s) 859
BstSFI CTRYAG 2 cut(s) 1167, 1344
BstV1I GCAGC 5 cut(s) 1186, 1580, 1682, 1893, 1989
BstV2I GAAGAC 1 cut(s) 387
BstX2I RGATCY 4 cut(s) 532, 682, 868, 1221
BstYI RGATCY 4 cut(s) 532, 682, 868, 1221
BstZ17I GTATAC 1 cut(s) 652
Bsu15I ATCGAT 1 cut(s) 1095
Bsu36I CCTNAGG 1 cut(s) 1320
BsuI GTATCC 3 cut(s) 440, 943, 1019
BsuRI GGCC 1 cut(s) 1256
BsuTUI ATCGAT 1 cut(s) 1095
BtgI CCRYGG 2 cut(s) 341, 1965
BtsCI GGATG 3 cut(s) 903, 1555, 1727
BtsIMutI CAGTG 3 cut(s) 243, 729, 997
BveI ACCTGC 3 cut(s) 391, 596, 1120
Cac8I GCNNGC 3 cut(s) 163, 1434, 1488
Cfr13I GGNCC 4 cut(s) 215, 453, 799, 1255
ClaI ATCGAT 1 cut(s) 1095
CseI GACGC 2 cut(s) 1329, 1784
Csp6I GTAC 5 cut(s) 661, 919, 1157, 1164, 1462
CviAII CATG 6 cut(s) 44, 1015, 1061, 1126, 1360, 1387
CviQI GTAC 5 cut(s) 661, 919, 1157, 1164, 1462
DdeI CTNAG 7 cut(s) 177, 246, 825, 1283, 1288, 1320, 1846
Eam1104I CTCTTC 4 cut(s) 32, 76, 1566, 1761
EarI CTCTTC 4 cut(s) 32, 76, 1566, 1761
Ecl136II GAGCTC 1 cut(s) 1576
Eco130I CCWWGG 2 cut(s) 971, 1746
Eco24I GRGCYC 3 cut(s) 746, 1014, 1578
Eco31I GGTCTC 2 cut(s) 53, 827
Eco32I GATATC 2 cut(s) 639, 1773
Eco47I GGWCC 3 cut(s) 215, 453, 799
Eco53kI GAGCTC 1 cut(s) 1576
Eco81I CCTNAGG 1 cut(s) 1320
EcoICRI GAGCTC 1 cut(s) 1576
EcoO109I RGGNCCY 1 cut(s) 453
EcoRV GATATC 2 cut(s) 639, 1773
EcoT14I CCWWGG 2 cut(s) 971, 1746
EcoT22I ATGCAT 1 cut(s) 1809
EcoT38I GRGCYC 3 cut(s) 746, 1014, 1578
ErhI CCWWGG 2 cut(s) 971, 1746
FaeI CATG 6 cut(s) 47, 1018, 1064, 1129, 1363, 1390
FalI AAGNNNNNCTT 4 cut(s) 128, 160, 1271, 1303
FaqI GGGAC 1 cut(s) 449
FatI CATG 6 cut(s) 43, 1014, 1060, 1125, 1359, 1386
FbaI TGATCA 2 cut(s) 784, 1995
FblI GTMKAC 1 cut(s) 651
Fnu4HI GCNGC 6 cut(s) 1175, 1594, 1696, 1882, 1978, 2018
FokI GGATG 3 cut(s) 910, 1562, 1714
FriOI GRGCYC 3 cut(s) 746, 1014, 1578
Fsp4HI GCNGC 6 cut(s) 1175, 1594, 1696, 1882, 1978, 2018
FspBI CTAG 5 cut(s) 309, 1178, 1308, 1742, 1865
GluI GCNGC 6 cut(s) 1175, 1594, 1696, 1882, 1978, 2018
GsuI CTGGAG 1 cut(s) 671
HaeIII GGCC 1 cut(s) 1256
HapII CCGG 1 cut(s) 860
HgaI GACGC 2 cut(s) 1329, 1784
Hin1II CATG 6 cut(s) 47, 1018, 1064, 1129, 1363, 1390
HincII GTYRAC 3 cut(s) 348, 611, 1962
HindII GTYRAC 3 cut(s) 348, 611, 1962
HindIII AAGCTT 3 cut(s) 666, 1280, 1430
HpaI GTTAAC 2 cut(s) 348, 1962
HpaII CCGG 1 cut(s) 860
HphI GGTGA 2 cut(s) 875, 1746
Hpy166II GTNNAC 5 cut(s) 348, 611, 652, 1557, 1962
Hpy8I GTNNAC 5 cut(s) 348, 611, 652, 1557, 1962
HpyAV CCTTC 9 cut(s) 49, 130, 228, 386, 480, 485, 736, 1181, 1930
HpyCH4III ACNGT 4 cut(s) 238, 345, 649, 1966
HpyCH4IV ACGT 1 cut(s) 601
HpyF10VI GCNNNNNNNGC 2 cut(s) 1887, 1908
HpyF3I CTNAG 7 cut(s) 177, 246, 825, 1283, 1288, 1320, 1846
HpySE526I ACGT 1 cut(s) 601
Hsp92II CATG 6 cut(s) 47, 1018, 1064, 1129, 1363, 1390
Ksp22I TGATCA 2 cut(s) 784, 1995
KspAI GTTAAC 2 cut(s) 348, 1962
LguI GCTCTTC 1 cut(s) 1566
LmnI GCTCC 4 cut(s) 1663, 1878, 1922, 1953
Lsp1109I GCAGC 5 cut(s) 1186, 1580, 1682, 1893, 1989
LweI GCATC 2 cut(s) 888, 1816
MaeI CTAG 5 cut(s) 309, 1178, 1308, 1742, 1865
MaeII ACGT 1 cut(s) 601
MaeIII GTNAC 6 cut(s) 547, 943, 1118, 1389, 1857, 1892
MfeI CAATTG 2 cut(s) 68, 167
MflI RGATCY 4 cut(s) 532, 682, 868, 1221
MhlI GDGCHC 3 cut(s) 746, 1014, 1578
MlyI GAGTC 4 cut(s) 80, 884, 1475, 1501
MmeI TCCRAC 5 cut(s) 293, 424, 1249, 1634, 1794
Mph1103I ATGCAT 1 cut(s) 1809
MroXI GAANNNNTTC 1 cut(s) 140
MslI CAYNNNNRTG 2 cut(s) 287, 1130
MspI CCGG 1 cut(s) 860
MspR9I CCNGG 1 cut(s) 861
MunI CAATTG 2 cut(s) 68, 167
MwoI GCNNNNNNNGC 2 cut(s) 1887, 1908
NciI CCSGG 1 cut(s) 861
NlaIII CATG 6 cut(s) 47, 1018, 1064, 1129, 1363, 1390
NlaIV GGNNCC 2 cut(s) 411, 455
NmuCI GTSAC 3 cut(s) 1118, 1389, 1857
NsiI ATGCAT 1 cut(s) 1809
NspI RCATGY 2 cut(s) 1129, 1390
PaqCI CACCTGC 1 cut(s) 1120
PciSI GCTCTTC 1 cut(s) 1566
PcsI WCGNNNNNNNCGW 2 cut(s) 586, 1792
PdmI GAANNNNTTC 1 cut(s) 140
PfeI GAWTC 7 cut(s) 305, 373, 495, 1114, 1420, 1751, 1937
PflFI GACNNNGTC 2 cut(s) 45, 1794
PkrI GCNGC 6 cut(s) 1176, 1595, 1697, 1883, 1979, 2019
PleI GAGTC 4 cut(s) 80, 883, 1475, 1501
PpsI GAGTC 4 cut(s) 80, 883, 1475, 1501
PpuMI RGGWCCY 1 cut(s) 453
PshBI ATTAAT 1 cut(s) 711
PsiI TTATAA 1 cut(s) 300
Psp124BI GAGCTC 1 cut(s) 1578
Psp5II RGGWCCY 1 cut(s) 453
PspN4I GGNNCC 2 cut(s) 411, 455
PspPI GGNCC 4 cut(s) 215, 453, 799, 1255
PspPPI RGGWCCY 1 cut(s) 453
PstI CTGCAG 2 cut(s) 1171, 1348
PsuI RGATCY 4 cut(s) 532, 682, 868, 1221
PsyI GACNNNGTC 2 cut(s) 45, 1794
RsaI GTAC 5 cut(s) 662, 920, 1158, 1165, 1463
RsaNI GTAC 5 cut(s) 661, 919, 1157, 1164, 1462
RseI CAYNNNNRTG 2 cut(s) 287, 1130
SacI GAGCTC 1 cut(s) 1578
SapI GCTCTTC 1 cut(s) 1566
SatI GCNGC 6 cut(s) 1175, 1594, 1696, 1882, 1978, 2018
Sau96I GGNCC 4 cut(s) 215, 453, 799, 1255
ScaI AGTACT 1 cut(s) 1165
SchI GAGTC 4 cut(s) 80, 884, 1475, 1501
ScrFI CCNGG 1 cut(s) 861
SduI GDGCHC 3 cut(s) 746, 1014, 1578
SfaNI GCATC 2 cut(s) 888, 1816
SfcI CTRYAG 2 cut(s) 1167, 1344
SinI GGWCC 3 cut(s) 215, 453, 799
SmiMI CAYNNNNRTG 2 cut(s) 287, 1130
SmlI CTYRAG 2 cut(s) 368, 1103
SmoI CTYRAG 2 cut(s) 368, 1103
SsiI CCGC 5 cut(s) 149, 797, 901, 1890, 2017
SspMI CTAG 5 cut(s) 309, 1178, 1308, 1742, 1865
SstI GAGCTC 1 cut(s) 1578
StyD4I CCNGG 1 cut(s) 859
StyI CCWWGG 2 cut(s) 971, 1746
TaaI ACNGT 4 cut(s) 238, 345, 649, 1966
TaiI ACGT 1 cut(s) 604
TaqI TCGA 4 cut(s) 1095, 1230, 1564, 1775
TatI WGTACW 4 cut(s) 660, 918, 1156, 1163
TauI GCSGC 1 cut(s) 2020
TfiI GAWTC 7 cut(s) 305, 373, 495, 1114, 1420, 1751, 1937
TscAI CASTG 3 cut(s) 250, 736, 997
TseFI GTSAC 3 cut(s) 1118, 1389, 1857
TseI GCWGC 5 cut(s) 1174, 1593, 1695, 1881, 1977
Tsp45I GTSAC 3 cut(s) 1118, 1389, 1857
TspDTI ATGAA 8 cut(s) 20, 114, 551, 661, 1186, 1260, 1663, 1713
TspGWI ACGGA 4 cut(s) 146, 365, 578, 962
TspRI CASTG 3 cut(s) 250, 736, 997
Tth111I GACNNNGTC 2 cut(s) 45, 1794
VpaK11BI GGWCC 3 cut(s) 215, 453, 799
VspI ATTAAT 1 cut(s) 711
XapI RAATTY 2 cut(s) 716, 1705
XceI RCATGY 2 cut(s) 1129, 1390
XmiI GTMKAC 1 cut(s) 651
XmnI GAANNNNTTC 1 cut(s) 140
XspI CTAG 5 cut(s) 309, 1178, 1308, 1742, 1865
ZrmI AGTACT 1 cut(s) 1165
Zsp2I ATGCAT 1 cut(s) 1809
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.