Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0004587

Physical Location & Seq

Genomic Coordinates Reverse (-)

29231467 .. 29238068

Gene Structure 6602 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g28680.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGGCTCAAGATATGTCTGGTGCTGATTCACATCAAAAACGGTCAGGCCTTTTAAAAGATCAAGTCCGTTTGGTTAAGAGGAAGGATTCCAATCATTATGAGATTGCACCAATCCAAAATCCTTTGTCATTTGAGAAGGGTTTCTTTATTGTAATCCGTGCATGTCAGTTACTAGCCCAAAAAAATGATGGAATAATATTGGTAGGAGTGGCGGGTCCTTCTGGGGCTGGAAAATCTGTGTTTACTGAAAAGATACTCAACTTCATGCCGAGTGTTGCGGTCATATCCATGGACAACTACAATGACGCTAGTCGAATTGTTGATGGAAACTTTGATGATCCACGTTTGACAGACTACGACACATTGCTCCAGAATGTCAGTGACTTGAGAGCAGGGAAAGCGGTTGAGGTGCCAGTTTATGACTTCAAGTCCAGTTCCCGCACAGGTTACAGGACAGTTGAAGTTCCAAGTTCCCGTATCGTGATCATTGAGGGCATCTATGCTTTGAGTGAAAAGTTGCGACCTTTACTGGATCTACGAGTATCTGTCACAGGAGGCGTTCACTTTGACCTTGTTAAAAGGGTTTTACGGGACATACAGCGAGCTGGCCAACAACCAGAAGAAATAATTCATCAAATATCTGAAACAGTATACCCAATGTACAAGGCCTTTATCGAGCCAGATCTTGAAACTGCTCATATAAAAATTATCAACAAGTTCAATCCATTTACTGGATTTCAAAGTCCCACATACATTTTAAAGTCAGCAAAGCCCTTGTCGGTGGATCAAATAAAGGCAGTCTTTACTGAAGAGCATACAGAAGCCAAGGAAGAGACCTATGATATATACCTTCTACCACCTGGTGAAGATCCAGAATCTTGCCAATCATATTTGAGGATGCGGGATAAAGATGGGAAATATAGTCTCATGTTTGAGGAGTGGGTGACGGATAATCCATTTGTTATATCACCAAGAATAACTTTTGAAGTCAGTGTGCGTCTTCTTGGTGGACTAATGGCTCTGGGATACACAATTGCAACTATTCTTAAGAGAAGCAGTCATGTATTCTCCAATGATGGTGTCTGCGTAAAAATTGATTGGCTAGAGCAACTAAATCGTCGATATATTCAGGTGCAAGGAAAGGATCGAGTAGTTGTAAGATGTGTTGCAGAGCAGCTTGGCTTGGAAGGTTCATACATCCCTCGTACCTACATTGAACAAATTCAACTGGAAAAGCTCGTGAATGAGGTCATGGCCTTGCCAGATGATTTGAAAACAAAGCTTAGCCTAGATGAAGATCTTGTTTTGAGCCCCAGAGACGCACTTTCTAGAGTATCTGCAGCTGTCATGAGAAATAGGCATCTCAAGAGTGGAATGTCACAGTCATATACAAACCAAAGAGACAAAAGTACAACCCGGCTCACTGGATATTCTAATGGTCAAAGGTTTGATGACAGAAATTCAGAATCAGAAGCAACACTAGCAAGCCAGGGAGTCATTACTCAGCTATCAGAACATATTTCCTCGCTCAATGATAGAATGGATGAGTTTACGAACCGAATTGAAGAGCTGAATTCCAAGTTGACTGTGAAGAAAAGTTCTAGCCAACAAAACCTTGCTCTTCAAGCTGAAACCTGCAATGGCTCCGCTCCCACTTCTTATTTCATCTCTGGCTTAGGCAATGGATCTATAATGCCTAATTCCTCGTCTTCTGCCCAGCTGGCTAAGGAGTCTCCAGCACTGGAAGAGATATCAAACATTACAAGGGGACAACGTCAAATCATGCATCAGTTAGACAATCTCAACAATCTCCTCCGGGAAAGCATGGGGGAGAGAAATCGAGTGGCAAGAACAAACAGCAGTAAAGGCACAGATGGTCGTTTTGAACCCTTGACAGTTCCTCTTGCAGTAACGCTTGCTGTTGGCATTTTAGGAGTCATCATATACAAGGGCGTCTCAAACCGAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006222 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009173 GO:0009174 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0043094 GO:0043097 GO:0043174 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046049 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko00983 ko01100 map00240 map00983 map01100

Pfam Domains

Protein Families

CYTH PRK

Protein Analysis

657

Amino Acids

73.27

Weight (kDa)

6.43

Isoelectric Point (pI)

47.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRK	PF00485	68 - 236	2.4e-24	Phosphoribulokinase / Uridine kinase family
CYTH	PF01928	252 - 404	4.9e-21	CYTH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004587)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26190 AT1G26190 AT1G26190 AT1G26190 AT1G26190 AT1G26190
fragaria_vesca	FvH4_4g28680
malus_domestica	MD13G1052900.v1.1 MD16G1051900.v1.1
prunus_persica	Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1
pyrus_communis	pycom13g04740 pycom16g04560
rosa_chinensis	RchiOBHm_Chr4g0436791
rosa_multiflora	Rmu_sc0001837.1_g000006
rosa_roxburghii	Rroxscaffold_1G00000940 Rroxscaffold_5G00377860
rosa_rugosa	Rorug04G0296100 Rorug04G0296200 Rorug04G0296300
rosa_samantha	Rh4AG350600 Rh4BG359500 Rh4CG373800
rosa_wichuraiana	Rw4G030680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1643
AccB1I	GGYRCC	1 cut(s)	409
AccB7I	CCANNNNNTGG	1 cut(s)	731
AccBSI	CCGCTC	1 cut(s)	1649
AccI	GTMKAC	1 cut(s)	651
AciI	CCGC	6 cut(s)	212, 278, 401, 439, 901, 1647
AclWI	GGATC	6 cut(s)	332, 540, 792, 863, 1152, 1693
AcoI	YGGCCR	1 cut(s)	607
AcsI	RAATTY	3 cut(s)	1221, 1459, 1573
AcuI	CTGAAG	1 cut(s)	828
AcyI	GRCGYC	1 cut(s)	1953
AdeI	CACNNNGTG	1 cut(s)	863
AfaI	GTAC	3 cut(s)	662, 1207, 1411
AfiI	CCNNNNNNNGG	1 cut(s)	731
AflII	CTTAAG	1 cut(s)	1046
AhdI	GACNNNNNGTC	1 cut(s)	427
AjnI	CCWGG	2 cut(s)	859, 1488
Alw26I	GTCTC	6 cut(s)	827, 929, 1311, 1395, 1737, 1960
AlwI	GGATC	6 cut(s)	332, 540, 792, 863, 1152, 1693
AoxI	GGCC	4 cut(s)	46, 607, 666, 1254
ApeKI	GCWGC	2 cut(s)	1174, 1340
ApoI	RAATTY	3 cut(s)	1221, 1459, 1573
ArsI	GACNNNNNNTTYG	2 cut(s)	761, 793
Asp700I	GAANNNNTTC	3 cut(s)	140, 627, 1221
AspS9I	GGNCC	1 cut(s)	215
AsuC2I	CCSGG	2 cut(s)	1417, 1817
AsuHPI	GGTGA	3 cut(s)	875, 955, 960
AvaII	GGWCC	1 cut(s)	215
BalI	TGGCCA	1 cut(s)	609
BanI	GGYRCC	1 cut(s)	409
BanII	GRGCYC	1 cut(s)	1313
BauI	CACGAG	1 cut(s)	1238
BbsI	GAAGAC	2 cut(s)	992, 1701
BbvI	GCAGC	2 cut(s)	1186, 1352
BccI	CCATC	5 cut(s)	182, 317, 905, 1070, 1868
BcgI	CGANNNNNNTGC	2 cut(s)	1097, 1131
BciT130I	CCWGG	2 cut(s)	861, 1490
BciVI	GTATCC	1 cut(s)	1019
BclI	TGATCA	1 cut(s)	483
BcnI	CCSGG	2 cut(s)	1417, 1817
BcoDI	GTCTC	6 cut(s)	827, 929, 1311, 1395, 1737, 1960
BfaI	CTAG	7 cut(s)	173, 309, 1103, 1289, 1329, 1481, 1602
BfmI	CTRYAG	1 cut(s)	1338
BfrI	CTTAAG	1 cut(s)	1046
BfuAI	ACCTGC	1 cut(s)	1643
BfuI	GTATCC	1 cut(s)	1019
BglI	GCCNNNNNGGC	1 cut(s)	1721
BglII	AGATCT	2 cut(s)	682, 1297
BisI	GCNGC	2 cut(s)	1175, 1341
BlpI	GCTNAGC	1 cut(s)	1283
BlsI	GCNGC	2 cut(s)	1176, 1342
Bme1390I	CCNGG	4 cut(s)	861, 1417, 1490, 1817
Bme18I	GGWCC	1 cut(s)	215
BmeRI	GACNNNNNGTC	1 cut(s)	427
BmgT120I	GGNCC	1 cut(s)	215
BmiI	GGNNCC	3 cut(s)	216, 411, 1645
BmrFI	CCNGG	4 cut(s)	861, 1417, 1490, 1817
BmsI	GCATC	4 cut(s)	504, 888, 1369, 1795
BoxI	GACNNNNGTC	1 cut(s)	309
BpiI	GAAGAC	2 cut(s)	992, 1701
BpmI	CTGGAG	2 cut(s)	353, 1719
Bpu10I	CCTNAGC	2 cut(s)	1675, 1725
Bpu1102I	GCTNAGC	1 cut(s)	1283
BpuEI	CTTGAG	2 cut(s)	406, 1349
BpuMI	CCSGG	2 cut(s)	1417, 1817
BsaBI	GATNNNNATC	3 cut(s)	30, 90, 1296
BsaHI	GRCGYC	1 cut(s)	1953
BsaI	GGTCTC	1 cut(s)	827
BsaJI	CCNNGG	3 cut(s)	288, 825, 1489
Bsc4I	CCNNNNNNNGG	1 cut(s)	731
Bse1I	ACTGG	7 cut(s)	413, 432, 534, 736, 1233, 1429, 1746
Bse3DI	GCAATG	3 cut(s)	362, 1645, 1687
Bse8I	GATNNNNATC	3 cut(s)	30, 90, 1296
BseBI	CCWGG	2 cut(s)	861, 1490
BseDI	CCNNGG	3 cut(s)	288, 825, 1489
BseGI	GGATG	3 cut(s)	903, 1197, 1549
BseJI	GATNNNNATC	3 cut(s)	30, 90, 1296
BseLI	CCNNNNNNNGG	1 cut(s)	731
BseMI	GCAATG	3 cut(s)	362, 1645, 1687
BseMII	CTCAG	1 cut(s)	1517
BseNI	ACTGG	7 cut(s)	413, 432, 534, 736, 1233, 1429, 1746
BseRI	GAGGAG	2 cut(s)	950, 1802
BseXI	GCAGC	2 cut(s)	1186, 1352
BseYI	CCCAGC	1 cut(s)	1716
BshFI	GGCC	4 cut(s)	48, 609, 668, 1256
BshNI	GGYRCC	1 cut(s)	409
BsiSI	CCGG	2 cut(s)	1417, 1816
BslFI	GGGAC	3 cut(s)	605, 729, 1782
BslI	CCNNNNNNNGG	1 cut(s)	731
BsmAI	GTCTC	6 cut(s)	827, 929, 1311, 1395, 1737, 1960
BsmBI	CGTCTC	2 cut(s)	1311, 1960
BsmFI	GGGAC	3 cut(s)	605, 729, 1782
BsnI	GGCC	4 cut(s)	48, 609, 668, 1256
Bso31I	GGTCTC	1 cut(s)	827
Bsp1286I	GDGCHC	1 cut(s)	1313
Bsp1407I	TGTACA	1 cut(s)	660
Bsp1720I	GCTNAGC	1 cut(s)	1283
Bsp19I	CCATGG	1 cut(s)	288
BspACI	CCGC	6 cut(s)	212, 278, 401, 439, 901, 1647
BspANI	GGCC	4 cut(s)	48, 609, 668, 1256
BspCNI	CTCAG	1 cut(s)	1516
BspHI	TCATGA	1 cut(s)	1347
BspLI	GGNNCC	3 cut(s)	216, 411, 1645
BspMAI	CTGCAG	1 cut(s)	1342
BspMI	ACCTGC	1 cut(s)	1643
BspPI	GGATC	6 cut(s)	332, 540, 792, 863, 1152, 1693
BspQI	GCTCTTC	3 cut(s)	804, 1560, 1626
BspT107I	GGYRCC	1 cut(s)	409
BspTI	CTTAAG	1 cut(s)	1046
BspTNI	GGTCTC	1 cut(s)	827
BsrBI	CCGCTC	1 cut(s)	1649
BsrDI	GCAATG	3 cut(s)	362, 1645, 1687
BsrGI	TGTACA	1 cut(s)	660
BsrI	ACTGG	7 cut(s)	413, 432, 534, 736, 1233, 1429, 1746
BssECI	CCNNGG	3 cut(s)	288, 825, 1489
BssNAI	GTATAC	1 cut(s)	652
BssNI	GRCGYC	1 cut(s)	1953
BssSI	CACGAG	1 cut(s)	1238
BssT1I	CCWWGG	2 cut(s)	288, 825
Bst1107I	GTATAC	1 cut(s)	652
Bst2BI	CACGAG	1 cut(s)	1238
Bst2UI	CCWGG	2 cut(s)	861, 1490
Bst4CI	ACNGT	6 cut(s)	42, 457, 649, 1383, 1588, 1897
Bst6I	CTCTTC	5 cut(s)	804, 825, 1560, 1626, 1740
BstACI	GRCGYC	1 cut(s)	1953
BstAFI	CTTAAG	1 cut(s)	1046
BstAUI	TGTACA	1 cut(s)	660
BstC8I	GCNNGC	5 cut(s)	603, 607, 1486, 1722, 1917
BstDEI	CTNAG	4 cut(s)	1283, 1503, 1675, 1725
BstDSI	CCRYGG	1 cut(s)	288
BstF5I	GGATG	3 cut(s)	903, 1197, 1549
BstMAI	GTCTC	6 cut(s)	827, 929, 1311, 1395, 1737, 1960
BstMWI	GCNNNNNNNGC	5 cut(s)	398, 1481, 1625, 1721, 1866
BstNI	CCWGG	2 cut(s)	861, 1490
BstNSI	RCATGY	1 cut(s)	165
BstPAI	GACNNNNGTC	1 cut(s)	309
BstSCI	CCNGG	4 cut(s)	859, 1415, 1488, 1815
BstSFI	CTRYAG	1 cut(s)	1338
BstV1I	GCAGC	2 cut(s)	1186, 1352
BstV2I	GAAGAC	2 cut(s)	992, 1701
BstX2I	RGATCY	5 cut(s)	532, 682, 868, 1297, 1685
BstYI	RGATCY	5 cut(s)	532, 682, 868, 1297, 1685
BstZ17I	GTATAC	1 cut(s)	652
BsuI	GTATCC	1 cut(s)	1019
BsuRI	GGCC	4 cut(s)	48, 609, 668, 1256
BtgI	CCRYGG	1 cut(s)	288
BtsCI	GGATG	3 cut(s)	903, 1197, 1549
BtsIMutI	CAGTG	4 cut(s)	385, 997, 1422, 1739
BveI	ACCTGC	1 cut(s)	1643
Cac8I	GCNNGC	5 cut(s)	603, 607, 1486, 1722, 1917
CciI	TCATGA	1 cut(s)	1347
Cfr13I	GGNCC	1 cut(s)	215
CseI	GACGC	4 cut(s)	314, 986, 1328, 1942
CsiI	ACCWGGT	1 cut(s)	859
Csp6I	GTAC	3 cut(s)	661, 1206, 1410
CviAII	CATG	9 cut(s)	162, 265, 289, 928, 1061, 1252, 1348, 1783, 1825
CviQI	GTAC	3 cut(s)	661, 1206, 1410
DdeI	CTNAG	4 cut(s)	1283, 1503, 1675, 1725
DraI	TTTAAA	2 cut(s)	54, 759
DraIII	CACNNNGTG	1 cut(s)	863
DriI	GACNNNNNGTC	1 cut(s)	427
EaeI	YGGCCR	1 cut(s)	607
Eam1104I	CTCTTC	5 cut(s)	804, 825, 1560, 1626, 1740
Eam1105I	GACNNNNNGTC	1 cut(s)	427
EarI	CTCTTC	5 cut(s)	804, 825, 1560, 1626, 1740
Eco130I	CCWWGG	2 cut(s)	288, 825
Eco147I	AGGCCT	2 cut(s)	48, 668
Eco24I	GRGCYC	1 cut(s)	1313
Eco31I	GGTCTC	1 cut(s)	827
Eco32I	GATATC	1 cut(s)	1752
Eco47I	GGWCC	1 cut(s)	215
Eco57I	CTGAAG	1 cut(s)	828
EcoO109I	RGGNCCY	1 cut(s)	215
EcoRI	GAATTC	1 cut(s)	1573
EcoRII	CCWGG	2 cut(s)	859, 1488
EcoRV	GATATC	1 cut(s)	1752
EcoT14I	CCWWGG	2 cut(s)	288, 825
EcoT22I	ATGCAT	1 cut(s)	1788
EcoT38I	GRGCYC	1 cut(s)	1313
ErhI	CCWWGG	2 cut(s)	288, 825
Esp3I	CGTCTC	2 cut(s)	1311, 1960
FaeI	CATG	9 cut(s)	165, 268, 292, 931, 1064, 1255, 1351, 1786, 1828
FalI	AAGNNNNNCTT	6 cut(s)	128, 160, 785, 817, 964, 996
FaqI	GGGAC	3 cut(s)	605, 729, 1782
FatI	CATG	9 cut(s)	161, 264, 288, 927, 1060, 1251, 1347, 1782, 1824
FauI	CCCGC	3 cut(s)	205, 446, 894
FbaI	TGATCA	1 cut(s)	483
FblI	GTMKAC	1 cut(s)	651
Fnu4HI	GCNGC	2 cut(s)	1175, 1341
FokI	GGATG	3 cut(s)	910, 1184, 1556
FriOI	GRGCYC	1 cut(s)	1313
Fsp4HI	GCNGC	2 cut(s)	1175, 1341
FspBI	CTAG	7 cut(s)	173, 309, 1103, 1289, 1329, 1481, 1602
GluI	GCNGC	2 cut(s)	1175, 1341
GsaI	CCCAGC	1 cut(s)	1720
GsuI	CTGGAG	2 cut(s)	353, 1719
HaeIII	GGCC	4 cut(s)	48, 609, 668, 1256
HapII	CCGG	2 cut(s)	1417, 1816
HgaI	GACGC	4 cut(s)	314, 986, 1328, 1942
Hin1I	GRCGYC	1 cut(s)	1953
Hin1II	CATG	9 cut(s)	165, 268, 292, 931, 1064, 1255, 1351, 1786, 1828
HincII	GTYRAC	1 cut(s)	1584
HindII	GTYRAC	1 cut(s)	1584
HindIII	AAGCTT	1 cut(s)	1280
HinfI	GANTC	7 cut(s)	26, 86, 875, 1466, 1494, 1730, 1935
HpaII	CCGG	2 cut(s)	1417, 1816
HphI	GGTGA	3 cut(s)	875, 955, 960
Hpy166II	GTNNAC	6 cut(s)	243, 562, 652, 1010, 1551, 1584
Hpy188I	TCNGA	4 cut(s)	643, 1465, 1471, 1513
Hpy188III	TCNNGA	9 cut(s)	8, 370, 481, 686, 872, 1240, 1329, 1348, 1366
Hpy8I	GTNNAC	6 cut(s)	243, 562, 652, 1010, 1551, 1584
Hpy99I	CGWCG	1 cut(s)	1122
HpyAV	CCTTC	5 cut(s)	76, 130, 228, 860, 1181
HpyCH4III	ACNGT	6 cut(s)	42, 457, 649, 1383, 1588, 1897
HpyCH4IV	ACGT	2 cut(s)	343, 1774
HpyCH4V	TGCA	9 cut(s)	107, 161, 1037, 1135, 1169, 1340, 1638, 1786, 1907
HpyF10VI	GCNNNNNNNGC	5 cut(s)	398, 1481, 1625, 1721, 1866
HpyF3I	CTNAG	4 cut(s)	1283, 1503, 1675, 1725
HpySE526I	ACGT	2 cut(s)	343, 1774
Hsp92I	GRCGYC	1 cut(s)	1953
Hsp92II	CATG	9 cut(s)	165, 268, 292, 931, 1064, 1255, 1351, 1786, 1828
Ksp22I	TGATCA	1 cut(s)	483
LguI	GCTCTTC	3 cut(s)	804, 1560, 1626
LmnI	GCTCC	3 cut(s)	372, 1649, 1654
Lsp1109I	GCAGC	2 cut(s)	1186, 1352
LweI	GCATC	4 cut(s)	504, 888, 1369, 1795
MabI	ACCWGGT	1 cut(s)	859
MaeI	CTAG	7 cut(s)	173, 309, 1103, 1289, 1329, 1481, 1602
MaeII	ACGT	2 cut(s)	343, 1774
MaeIII	GTNAC	7 cut(s)	168, 380, 446, 547, 943, 1377, 1909
MbiI	CCGCTC	1 cut(s)	1649
MfeI	CAATTG	1 cut(s)	1032
MflI	RGATCY	5 cut(s)	532, 682, 868, 1297, 1685
MhlI	GDGCHC	1 cut(s)	1313
MlsI	TGGCCA	1 cut(s)	609
MluNI	TGGCCA	1 cut(s)	609
MlyI	GAGTC	3 cut(s)	1503, 1739, 1944
Mox20I	TGGCCA	1 cut(s)	609
Mph1103I	ATGCAT	1 cut(s)	1788
MroXI	GAANNNNTTC	3 cut(s)	140, 627, 1221
MscI	TGGCCA	1 cut(s)	609
MseI	TTAA	5 cut(s)	53, 75, 576, 758, 1047
MslI	CAYNNNNRTG	1 cut(s)	287
Msp20I	TGGCCA	1 cut(s)	609
MspA1I	CMGCKG	2 cut(s)	1343, 1720
MspCI	CTTAAG	1 cut(s)	1046
MspI	CCGG	2 cut(s)	1417, 1816
MspR9I	CCNGG	4 cut(s)	861, 1417, 1490, 1817
MunI	CAATTG	1 cut(s)	1032
MvaI	CCWGG	2 cut(s)	861, 1490
MwoI	GCNNNNNNNGC	5 cut(s)	398, 1481, 1625, 1721, 1866
NciI	CCSGG	2 cut(s)	1417, 1817
NcoI	CCATGG	1 cut(s)	288
NlaIII	CATG	9 cut(s)	165, 268, 292, 931, 1064, 1255, 1351, 1786, 1828
NlaIV	GGNNCC	3 cut(s)	216, 411, 1645
NmeAIII	GCCGAG	1 cut(s)	294
NmuCI	GTSAC	4 cut(s)	380, 547, 943, 1377
NsiI	ATGCAT	1 cut(s)	1788
NspI	RCATGY	1 cut(s)	165
PagI	TCATGA	1 cut(s)	1347
PceI	AGGCCT	2 cut(s)	48, 668
PciSI	GCTCTTC	3 cut(s)	804, 1560, 1626
PdmI	GAANNNNTTC	3 cut(s)	140, 627, 1221
PfeI	GAWTC	4 cut(s)	26, 86, 875, 1466
PflFI	GACNNNGTC	1 cut(s)	1773
PflMI	CCANNNNNTGG	1 cut(s)	731
PfoI	TCCNGGA	1 cut(s)	1815
PkrI	GCNGC	2 cut(s)	1176, 1342
PleI	GAGTC	3 cut(s)	1502, 1738, 1943
PpsI	GAGTC	3 cut(s)	1502, 1738, 1943
PpuMI	RGGWCCY	1 cut(s)	215
PshAI	GACNNNNGTC	1 cut(s)	309
Psp5II	RGGWCCY	1 cut(s)	215
Psp6I	CCWGG	2 cut(s)	859, 1488
PspFI	CCCAGC	1 cut(s)	1716
PspGI	CCWGG	2 cut(s)	859, 1488
PspN4I	GGNNCC	3 cut(s)	216, 411, 1645
PspPI	GGNCC	1 cut(s)	215
PspPPI	RGGWCCY	1 cut(s)	215
PstI	CTGCAG	1 cut(s)	1342
PsuI	RGATCY	5 cut(s)	532, 682, 868, 1297, 1685
PsyI	GACNNNGTC	1 cut(s)	1773
PvuII	CAGCTG	2 cut(s)	1343, 1720
RsaI	GTAC	3 cut(s)	662, 1207, 1411
RsaNI	GTAC	3 cut(s)	661, 1206, 1410
RseI	CAYNNNNRTG	1 cut(s)	287
SapI	GCTCTTC	3 cut(s)	804, 1560, 1626
SaqAI	TTAA	5 cut(s)	53, 75, 576, 758, 1047
SatI	GCNGC	2 cut(s)	1175, 1341
Sau96I	GGNCC	1 cut(s)	215
SchI	GAGTC	3 cut(s)	1503, 1739, 1944
ScrFI	CCNGG	4 cut(s)	861, 1417, 1490, 1817
SduI	GDGCHC	1 cut(s)	1313
SexAI	ACCWGGT	1 cut(s)	859
SfaNI	GCATC	4 cut(s)	504, 888, 1369, 1795
SfcI	CTRYAG	1 cut(s)	1338
SinI	GGWCC	1 cut(s)	215
SmiMI	CAYNNNNRTG	1 cut(s)	287
SmlI	CTYRAG	4 cut(s)	6, 385, 1046, 1364
SmoI	CTYRAG	4 cut(s)	6, 385, 1046, 1364
SseBI	AGGCCT	2 cut(s)	48, 668
SsiI	CCGC	6 cut(s)	212, 278, 401, 439, 901, 1647
SspI	AATATT	1 cut(s)	198
SspMI	CTAG	7 cut(s)	173, 309, 1103, 1289, 1329, 1481, 1602
StuI	AGGCCT	2 cut(s)	48, 668
StyD4I	CCNGG	4 cut(s)	859, 1415, 1488, 1815
StyI	CCWWGG	2 cut(s)	288, 825
TaaI	ACNGT	6 cut(s)	42, 457, 649, 1383, 1588, 1897
TaiI	ACGT	2 cut(s)	346, 1777
TaqI	TCGA	5 cut(s)	313, 675, 1120, 1147, 1840
TatI	WGTACW	2 cut(s)	660, 1409
TfiI	GAWTC	4 cut(s)	26, 86, 875, 1466
Tru1I	TTAA	5 cut(s)	53, 75, 576, 758, 1047
Tru9I	TTAA	5 cut(s)	53, 75, 576, 758, 1047
TscAI	CASTG	4 cut(s)	385, 997, 1429, 1746
TseFI	GTSAC	4 cut(s)	380, 547, 943, 1377
TseI	GCWGC	2 cut(s)	1174, 1340
Tsp45I	GTSAC	4 cut(s)	380, 547, 943, 1377
TspDTI	ATGAA	5 cut(s)	253, 620, 1182, 1308, 1654
TspGWI	ACGGA	3 cut(s)	56, 146, 962
TspRI	CASTG	4 cut(s)	385, 997, 1429, 1746
Tth111I	GACNNNGTC	1 cut(s)	1773
Van91I	CCANNNNNTGG	1 cut(s)	731
Vha464I	CTTAAG	1 cut(s)	1046
VpaK11BI	GGWCC	1 cut(s)	215
XapI	RAATTY	3 cut(s)	1221, 1459, 1573
XbaI	TCTAGA	1 cut(s)	1328
XceI	RCATGY	1 cut(s)	165
XcmI	CCANNNNNNNNNTGG	1 cut(s)	185
XmiI	GTMKAC	1 cut(s)	651
XmnI	GAANNNNTTC	3 cut(s)	140, 627, 1221
XspI	CTAG	7 cut(s)	173, 309, 1103, 1289, 1329, 1481, 1602
Zsp2I	ATGCAT	1 cut(s)	1788

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.