Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0004587

Physical Location & Seq

Genomic Coordinates Reverse (-)

3745288 .. 3751215

Gene Structure 5928 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1052900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGACTCAAGATATGTCTGGTTCTGATTCACATCAAAGACGGCAAGGCCTTTTAAAAGATCAAGTTCGATTGGTTAAGCGAAGGGATTCTTCTTCTTACGAGATTGCGCCGATTCAAAGTTCTTTGTCATTTGAGAAGGGTTTCTTTATAGTAATCCGTGCGTGCCAGTTGTTGGCCCAAAAGAATGACGGAATAATATTAGTAGGAGTTGCGGGTCCTTCTGGGGCTGGAAAGACTATATTTACAGAAAAGATACTCAACTTTATGCCCAGCGTTGCTGTCATATCAATGGACAACTACAATGATGCCAGTCGAATTGTCGATGGAAACTTTGATGATCCACGCTTGACAGACTACGACACATTGCTCCAGAATGTCAATGATTTAAAAGCAGGGAAGCAGGTTGAGGTTCCAGTTTATGACTTCAAGTCTAGTTCCCGGACAGGATACAGGACAGTTGACGTCCCAAGTTCCCGTATTGTGATCATTGAGGGCATCTATGCTTTGAGTGAAAAGTTGCGACCCTTTCTGGATTTACGAGTATCAGTCACAGGTGGTGTTCACTTTGACCTTGTCAAAAGGGTTTTACGGGATATACAGAGAGCAGGCCAAGAACCAGAAGAAATAATCCATCAAATATCTGAAACTGTATATCCAATGTACAAGGCGTTTATTGAGCCAGACCTTCAAACAGCACATATAAAAATTATCAACAAATTTAACCCATTTACTGGATTTCAGAGCCCCACTTACATTTTGAAGTCAGCAAAGAACTTGTCTGCGGATCAAATTAAGGCTGTTTTTTCTGAAGATCACACAGAAGCCAAGGAGGAGACCTATGATATATACCTTCTACCACCTGGTGAAGATCCCGAATCTTGCCAATCATATCTGAGGATGCGGGATAAAGATGGGAAATATAGTCTAATGTTTGAGGAATGGGTGACAGATAACCCATTTGTTATATCACCGAGAATAACTTTTGAGGTCAGTGTGCGTCTTCTTGGTGGACTAATGGCCTTGGGCTACACCATTGCAACTATCCTTAAAAGAAGCAGCCATGTATTCTCCAATGATGGAGTATGTGTAAAAATTGATTGGCTAGAGCAACTAAATCGTCGATATATTCAGGTGCAAGGAAAAGATCGGGTAGTTGTAAGATGTGTTGCTGAGCAGCTTGGCTTGGAAGGTTCATACATTCCTCGTACGTACATTGAACAGATTCAACTGGAAAAGCTTGTAAATGAGGTCATGGCTTTGCCAGATGATTTGAAGACGAGGCTTAGCCTCGATGAGGATCTTGTTTCAAGCCCCAAAGAAGCACTTTCCAGAGCCACTGCAGATAGAGTTGCCATGAGAAATAAGAATCTCAAGAGTGGTATGTCACAATCCTATACAACCCAACGGGACAAAAGTACATCTAAGCTTACCGGATATTCTTCCAGCAGTCAAAGGTTTGATGAGAGAAACACAGAGTCATCAACAACGCTAGCAAGCCAGGGGGTAGTGACTCAGCTATCAGAGCAAATGTCTTTGCTGAATGATAGAATGGATGAGTTTACAAATCGAATCGAAGAGCTGAATTCCAAGCTGACCGTGAAGAACTCTCCTAGCCAAAAAAACATGGCTCTTCAAGCTGAAAACTGCAATGGCTCTGCTCCCACGTCTTACTTCATTTCTGGCCTAGGCAACGGTTCGTTAACTGGGGCGATAATGCCTAATTCCTCCTCTTCCTCACAGCTGACTAAGGAGTCTTCAGTAATGGAAGAGATGTCAAGCATTGCGAGGGGACAGCGTCAAATCATGCATCAGTTGGACAATCTCAGCAATCTTCTCCGGGACAGCAATGGGGAAAGACCTCGCCCGGTAAAAACTAACAGCAGGAAGAACATCGTAGCTCAACCCGAACCCTTGACGGTTCCTCTTGCAATAACGCTGGCAGTTGGAGTTGTAGGAGTGATCATATACAAGGGTATCCTAACTAGAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006222 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009173 GO:0009174 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0043094 GO:0043097 GO:0043174 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046049 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko00983 ko01100 map00240 map00983 map01100

Pfam Domains

Protein Families

CYTH PRK

Protein Analysis

664

Amino Acids

74.06

Weight (kDa)

6.71

Isoelectric Point (pI)

51.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRK	PF00485	68 - 236	5.8e-25	Phosphoribulokinase / Uridine kinase family
CYTH	PF01928	251 - 404	1.1e-21	CYTH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004587)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26190 AT1G26190 AT1G26190 AT1G26190 AT1G26190 AT1G26190
fragaria_vesca	FvH4_4g28680
malus_domestica	MD13G1052900.v1.1 MD16G1051900.v1.1
prunus_persica	Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1
pyrus_communis	pycom13g04740 pycom16g04560
rosa_chinensis	RchiOBHm_Chr4g0436791
rosa_multiflora	Rmu_sc0001837.1_g000006
rosa_roxburghii	Rroxscaffold_1G00000940 Rroxscaffold_5G00377860
rosa_rugosa	Rorug04G0296100 Rorug04G0296200 Rorug04G0296300
rosa_samantha	Rh4AG350600 Rh4BG359500 Rh4CG373800
rosa_wichuraiana	Rw4G030680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1750
AatII	GACGTC	1 cut(s)	465
Acc36I	ACCTGC	1 cut(s)	391
AccB7I	CCANNNNNTGG	2 cut(s)	172, 731
AciI	CCGC	3 cut(s)	212, 782, 901
AclWI	GGATC	4 cut(s)	332, 792, 863, 1305
AcsI	RAATTY	2 cut(s)	716, 1582
AcuI	CTGAAG	2 cut(s)	828, 1740
AcyI	GRCGYC	1 cut(s)	462
AdeI	CACNNNGTG	1 cut(s)	863
AfaI	GTAC	4 cut(s)	662, 1207, 1211, 1417
AfiI	CCNNNNNNNGG	3 cut(s)	172, 731, 1294
AgsI	TTSAA	9 cut(s)	116, 427, 689, 760, 1217, 1226, 1273, 1308, 1634
AhdI	GACNNNNNGTC	1 cut(s)	427
AjiI	CACGTC	1 cut(s)	1665
AjnI	CCWGG	2 cut(s)	859, 1497
AluBI	AGCT	9 cut(s)	1177, 1237, 1426, 1516, 1579, 1591, 1637, 1741, 1898
AluI	AGCT	9 cut(s)	1177, 1237, 1426, 1516, 1579, 1591, 1637, 1741, 1898
Alw26I	GTCTC	1 cut(s)	827
AlwI	GGATC	4 cut(s)	332, 792, 863, 1305
AoxI	GGCC	5 cut(s)	46, 174, 607, 1017, 1681
ApeKI	GCWGC	2 cut(s)	1056, 1174
ApoI	RAATTY	2 cut(s)	716, 1582
ArsI	GACNNNNNNTTYG	2 cut(s)	761, 793
Asp700I	GAANNNNTTC	3 cut(s)	85, 140, 1221
AspA2I	CCTAGG	1 cut(s)	1684
AspLEI	GCGC	1 cut(s)	109
AspS9I	GGNCC	2 cut(s)	175, 215
AsuC2I	CCSGG	3 cut(s)	439, 1838, 1865
AsuHPI	GGTGA	3 cut(s)	875, 955, 960
AsuNHI	GCTAGC	1 cut(s)	1489
AvaII	GGWCC	1 cut(s)	215
AvrII	CCTAGG	1 cut(s)	1684
BaeI	ACNNNNGTAYC	2 cut(s)	1957, 1990
BanII	GRGCYC	1 cut(s)	746
BbsI	GAAGAC	3 cut(s)	992, 1280, 1746
BbvI	GCAGC	2 cut(s)	1068, 1186
BccI	CCATC	4 cut(s)	317, 639, 905, 1070
BceAI	ACGGC	1 cut(s)	56
BcgI	CGANNNNNNTGC	2 cut(s)	1097, 1131
BciT130I	CCWGG	2 cut(s)	861, 1499
BciVI	GTATCC	2 cut(s)	440, 1985
BclI	TGATCA	2 cut(s)	483, 1959
BcnI	CCSGG	3 cut(s)	439, 1838, 1865
BcoDI	GTCTC	1 cut(s)	827
BfaI	CTAG	6 cut(s)	432, 1103, 1490, 1611, 1685, 1983
BfmI	CTRYAG	1 cut(s)	1338
BfuAI	ACCTGC	1 cut(s)	391
BfuI	GTATCC	2 cut(s)	440, 1985
BisI	GCNGC	2 cut(s)	1057, 1175
BlnI	CCTAGG	1 cut(s)	1684
BlpI	GCTNAGC	2 cut(s)	1170, 1283
BlsI	GCNGC	2 cut(s)	1058, 1176
Bme1390I	CCNGG	5 cut(s)	439, 861, 1499, 1838, 1865
Bme18I	GGWCC	1 cut(s)	215
BmeRI	GACNNNNNGTC	1 cut(s)	427
BmgBI	CACGTC	1 cut(s)	1665
BmgT120I	GGNCC	2 cut(s)	175, 215
BmiI	GGNNCC	3 cut(s)	216, 411, 1920
BmrFI	CCNGG	5 cut(s)	439, 861, 1499, 1838, 1865
BmrI	ACTGGG	1 cut(s)	1713
BmsI	GCATC	4 cut(s)	295, 504, 888, 1816
BmtI	GCTAGC	1 cut(s)	1493
BmuI	ACTGGG	1 cut(s)	1713
BpiI	GAAGAC	3 cut(s)	992, 1280, 1746
BpmI	CTGGAG	1 cut(s)	353
Bpu1102I	GCTNAGC	2 cut(s)	1170, 1283
BpuEI	CTTGAG	1 cut(s)	1355
BpuMI	CCSGG	3 cut(s)	439, 1838, 1865
BsaAI	YACGTR	1 cut(s)	1209
BsaBI	GATNNNNATC	2 cut(s)	30, 1296
BsaHI	GRCGYC	1 cut(s)	462
BsaI	GGTCTC	1 cut(s)	827
BsaJI	CCNNGG	4 cut(s)	825, 1020, 1498, 1684
BsaWI	WCCGGW	1 cut(s)	1430
BsaXI	ACNNNNNCTCC	2 cut(s)	1071, 1101
Bsc4I	CCNNNNNNNGG	3 cut(s)	172, 731, 1294
Bse1I	ACTGG	6 cut(s)	166, 309, 413, 736, 1233, 1708
Bse3DI	GCAATG	5 cut(s)	362, 1032, 1654, 1779, 1852
Bse8I	GATNNNNATC	2 cut(s)	30, 1296
BseBI	CCWGG	2 cut(s)	861, 1499
BseDI	CCNNGG	4 cut(s)	825, 1020, 1498, 1684
BseGI	GGATG	2 cut(s)	903, 1558
BseJI	GATNNNNATC	2 cut(s)	30, 1296
BseLI	CCNNNNNNNGG	3 cut(s)	172, 731, 1294
BseMI	GCAATG	5 cut(s)	362, 1032, 1654, 1779, 1852
BseMII	CTCAG	4 cut(s)	884, 1161, 1526, 1837
BseNI	ACTGG	6 cut(s)	166, 309, 413, 736, 1233, 1708
BseRI	GAGGAG	2 cut(s)	845, 1717
BseXI	GCAGC	2 cut(s)	1068, 1186
BseYI	CCCAGC	1 cut(s)	269
BshFI	GGCC	5 cut(s)	48, 176, 609, 1019, 1683
BsiSI	CCGG	4 cut(s)	439, 1431, 1837, 1865
BsiWI	CGTACG	1 cut(s)	1205
BslFI	GGGAC	4 cut(s)	449, 1421, 1803, 1853
BslI	CCNNNNNNNGG	3 cut(s)	172, 731, 1294
BsmAI	GTCTC	1 cut(s)	827
BsmFI	GGGAC	4 cut(s)	449, 1421, 1803, 1853
BsnI	GGCC	5 cut(s)	48, 176, 609, 1019, 1683
Bso31I	GGTCTC	1 cut(s)	827
Bsp1286I	GDGCHC	1 cut(s)	746
Bsp1407I	TGTACA	1 cut(s)	660
Bsp143I	GATC	9 cut(s)	58, 337, 483, 784, 811, 868, 1144, 1297, 1959
Bsp1720I	GCTNAGC	2 cut(s)	1170, 1283
BspACI	CCGC	3 cut(s)	212, 782, 901
BspANI	GGCC	5 cut(s)	48, 176, 609, 1019, 1683
BspCNI	CTCAG	4 cut(s)	885, 1162, 1525, 1836
BspLI	GGNNCC	3 cut(s)	216, 411, 1920
BspMAI	CTGCAG	1 cut(s)	1342
BspMI	ACCTGC	1 cut(s)	391
BspOI	GCTAGC	1 cut(s)	1493
BspPI	GGATC	4 cut(s)	332, 792, 863, 1305
BspQI	GCTCTTC	2 cut(s)	1569, 1635
BspTNI	GGTCTC	1 cut(s)	827
BsrDI	GCAATG	5 cut(s)	362, 1032, 1654, 1779, 1852
BsrGI	TGTACA	1 cut(s)	660
BsrI	ACTGG	6 cut(s)	166, 309, 413, 736, 1233, 1708
BssECI	CCNNGG	4 cut(s)	825, 1020, 1498, 1684
BssMI	GATC	9 cut(s)	58, 337, 483, 784, 811, 868, 1144, 1297, 1959
BssNI	GRCGYC	1 cut(s)	462
BssT1I	CCWWGG	3 cut(s)	825, 1020, 1684
Bst2UI	CCWGG	2 cut(s)	861, 1499
Bst4CI	ACNGT	5 cut(s)	457, 649, 1597, 1694, 1918
Bst6I	CTCTTC	4 cut(s)	1569, 1635, 1735, 1761
BstACI	GRCGYC	1 cut(s)	462
BstAUI	TGTACA	1 cut(s)	660
BstBAI	YACGTR	1 cut(s)	1209
BstC8I	GCNNGC	5 cut(s)	163, 607, 1491, 1495, 1938
BstDEI	CTNAG	7 cut(s)	893, 1170, 1283, 1422, 1512, 1746, 1823
BstENI	CCTNNNNNAGG	1 cut(s)	1292
BstF5I	GGATG	2 cut(s)	903, 1558
BstHHI	GCGC	1 cut(s)	109
BstKTI	GATC	9 cut(s)	61, 340, 486, 787, 814, 871, 1147, 1300, 1962
BstMAI	GTCTC	1 cut(s)	827
BstMBI	GATC	9 cut(s)	58, 337, 483, 784, 811, 868, 1144, 1297, 1959
BstMWI	GCNNNNNNNGC	2 cut(s)	1522, 1634
BstNI	CCWGG	2 cut(s)	861, 1499
BstSCI	CCNGG	5 cut(s)	437, 859, 1497, 1836, 1863
BstSFI	CTRYAG	1 cut(s)	1338
BstSNI	TACGTA	1 cut(s)	1209
BstV1I	GCAGC	2 cut(s)	1068, 1186
BstV2I	GAAGAC	3 cut(s)	992, 1280, 1746
BstX2I	RGATCY	2 cut(s)	868, 1297
BstYI	RGATCY	2 cut(s)	868, 1297
BsuI	GTATCC	2 cut(s)	440, 1985
BsuRI	GGCC	5 cut(s)	48, 176, 609, 1019, 1683
BtrI	CACGTC	1 cut(s)	1665
BtsCI	GGATG	2 cut(s)	903, 1558
BtsI	GCAGTG	1 cut(s)	1335
BtsIMutI	CAGTG	2 cut(s)	997, 1335
BveI	ACCTGC	1 cut(s)	391
Cac8I	GCNNGC	5 cut(s)	163, 607, 1491, 1495, 1938
CfoI	GCGC	1 cut(s)	109
Cfr13I	GGNCC	2 cut(s)	175, 215
CseI	GACGC	2 cut(s)	986, 1784
CsiI	ACCWGGT	1 cut(s)	859
Csp6I	GTAC	4 cut(s)	661, 1206, 1210, 1416
CviAII	CATG	5 cut(s)	1061, 1252, 1354, 1624, 1804
CviQI	GTAC	4 cut(s)	661, 1206, 1210, 1416
DdeI	CTNAG	7 cut(s)	893, 1170, 1283, 1422, 1512, 1746, 1823
DpnI	GATC	9 cut(s)	60, 339, 485, 786, 813, 870, 1146, 1299, 1961
DpnII	GATC	9 cut(s)	58, 337, 483, 784, 811, 868, 1144, 1297, 1959
DraI	TTTAAA	2 cut(s)	54, 387
DraIII	CACNNNGTG	1 cut(s)	863
DrdI	GACNNNNNNGTC	1 cut(s)	1750
DriI	GACNNNNNGTC	1 cut(s)	427
DseDI	GACNNNNNNGTC	1 cut(s)	1750
Eam1104I	CTCTTC	4 cut(s)	1569, 1635, 1735, 1761
Eam1105I	GACNNNNNGTC	1 cut(s)	427
EarI	CTCTTC	4 cut(s)	1569, 1635, 1735, 1761
Eco105I	TACGTA	1 cut(s)	1209
Eco130I	CCWWGG	3 cut(s)	825, 1020, 1684
Eco147I	AGGCCT	1 cut(s)	48
Eco24I	GRGCYC	1 cut(s)	746
Eco31I	GGTCTC	1 cut(s)	827
Eco47I	GGWCC	1 cut(s)	215
Eco57I	CTGAAG	2 cut(s)	828, 1740
EcoNI	CCTNNNNNAGG	1 cut(s)	1292
EcoO109I	RGGNCCY	1 cut(s)	215
EcoRI	GAATTC	1 cut(s)	1582
EcoRII	CCWGG	2 cut(s)	859, 1497
EcoT14I	CCWWGG	3 cut(s)	825, 1020, 1684
EcoT22I	ATGCAT	1 cut(s)	1809
EcoT38I	GRGCYC	1 cut(s)	746
ErhI	CCWWGG	3 cut(s)	825, 1020, 1684
FaeI	CATG	5 cut(s)	1064, 1255, 1357, 1627, 1807
FalI	AAGNNNNNCTT	6 cut(s)	73, 105, 128, 160, 1308, 1340
FaqI	GGGAC	4 cut(s)	449, 1421, 1803, 1853
FatI	CATG	5 cut(s)	1060, 1251, 1353, 1623, 1803
FauI	CCCGC	2 cut(s)	205, 894
FbaI	TGATCA	2 cut(s)	483, 1959
Fnu4HI	GCNGC	2 cut(s)	1057, 1175
FokI	GGATG	2 cut(s)	910, 1565
FriOI	GRGCYC	1 cut(s)	746
Fsp4HI	GCNGC	2 cut(s)	1057, 1175
FspBI	CTAG	6 cut(s)	432, 1103, 1490, 1611, 1685, 1983
GlaI	GCGC	1 cut(s)	108
GluI	GCNGC	2 cut(s)	1057, 1175
GsaI	CCCAGC	1 cut(s)	273
GsuI	CTGGAG	1 cut(s)	353
HaeIII	GGCC	5 cut(s)	48, 176, 609, 1019, 1683
HapII	CCGG	4 cut(s)	439, 1431, 1837, 1865
HgaI	GACGC	2 cut(s)	986, 1784
HhaI	GCGC	1 cut(s)	109
Hin1I	GRCGYC	1 cut(s)	462
Hin1II	CATG	5 cut(s)	1064, 1255, 1357, 1627, 1807
Hin6I	GCGC	1 cut(s)	107
HinP1I	GCGC	1 cut(s)	107
HincII	GTYRAC	2 cut(s)	460, 1701
HindII	GTYRAC	2 cut(s)	460, 1701
HindIII	AAGCTT	2 cut(s)	1235, 1424
HpaI	GTTAAC	1 cut(s)	1701
HpaII	CCGG	4 cut(s)	439, 1431, 1837, 1865
HphI	GGTGA	3 cut(s)	875, 955, 960
Hpy166II	GTNNAC	5 cut(s)	460, 562, 1010, 1560, 1701
Hpy188I	TCNGA	6 cut(s)	25, 643, 741, 808, 894, 1522
Hpy188III	TCNNGA	6 cut(s)	8, 370, 530, 872, 1329, 1372
Hpy8I	GTNNAC	5 cut(s)	460, 562, 1010, 1560, 1701
Hpy99I	CGWCG	1 cut(s)	1122
HpyAV	CCTTC	6 cut(s)	75, 130, 228, 695, 860, 1181
HpyCH4III	ACNGT	5 cut(s)	457, 649, 1597, 1694, 1918
HpyCH4IV	ACGT	3 cut(s)	462, 1208, 1664
HpyCH4V	TGCA	6 cut(s)	1037, 1135, 1340, 1647, 1807, 1928
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1522, 1634
HpyF3I	CTNAG	7 cut(s)	893, 1170, 1283, 1422, 1512, 1746, 1823
HpySE526I	ACGT	3 cut(s)	462, 1208, 1664
Hsp92I	GRCGYC	1 cut(s)	462
Hsp92II	CATG	5 cut(s)	1064, 1255, 1357, 1627, 1807
HspAI	GCGC	1 cut(s)	107
Ksp22I	TGATCA	2 cut(s)	483, 1959
KspAI	GTTAAC	1 cut(s)	1701
Kzo9I	GATC	9 cut(s)	58, 337, 483, 784, 811, 868, 1144, 1297, 1959
LguI	GCTCTTC	2 cut(s)	1569, 1635
LmnI	GCTCC	2 cut(s)	372, 1663
Lsp1109I	GCAGC	2 cut(s)	1068, 1186
LweI	GCATC	4 cut(s)	295, 504, 888, 1816
MabI	ACCWGGT	1 cut(s)	859
MaeI	CTAG	6 cut(s)	432, 1103, 1490, 1611, 1685, 1983
MaeII	ACGT	3 cut(s)	462, 1208, 1664
MaeIII	GTNAC	4 cut(s)	547, 943, 1383, 1507
MalI	GATC	9 cut(s)	60, 339, 485, 786, 813, 870, 1146, 1299, 1961
MboI	GATC	9 cut(s)	58, 337, 483, 784, 811, 868, 1144, 1297, 1959
MflI	RGATCY	2 cut(s)	868, 1297
MhlI	GDGCHC	1 cut(s)	746
MluCI	AATT	7 cut(s)	315, 705, 716, 789, 1092, 1582, 1720
MlyI	GAGTC	3 cut(s)	1484, 1504, 1760
MmeI	TCCRAC	2 cut(s)	1794, 1924
Mph1103I	ATGCAT	1 cut(s)	1809
MroXI	GAANNNNTTC	3 cut(s)	85, 140, 1221
MseI	TTAA	7 cut(s)	53, 75, 386, 720, 792, 1047, 1700
MslI	CAYNNNNRTG	1 cut(s)	287
MspA1I	CMGCKG	1 cut(s)	1741
MspI	CCGG	4 cut(s)	439, 1431, 1837, 1865
MspR9I	CCNGG	5 cut(s)	439, 861, 1499, 1838, 1865
MvaI	CCWGG	2 cut(s)	861, 1499
MwoI	GCNNNNNNNGC	2 cut(s)	1522, 1634
NciI	CCSGG	3 cut(s)	439, 1838, 1865
NdeII	GATC	9 cut(s)	58, 337, 483, 784, 811, 868, 1144, 1297, 1959
NheI	GCTAGC	1 cut(s)	1489
NlaIII	CATG	5 cut(s)	1064, 1255, 1357, 1627, 1807
NlaIV	GGNNCC	3 cut(s)	216, 411, 1920
NmuCI	GTSAC	4 cut(s)	547, 943, 1383, 1507
NsiI	ATGCAT	1 cut(s)	1809
PceI	AGGCCT	1 cut(s)	48
PciSI	GCTCTTC	2 cut(s)	1569, 1635
PdmI	GAANNNNTTC	3 cut(s)	85, 140, 1221
PfeI	GAWTC	7 cut(s)	26, 86, 112, 875, 1222, 1366, 1569
Pfl23II	CGTACG	1 cut(s)	1205
PflFI	GACNNNGTC	2 cut(s)	572, 1794
PflMI	CCANNNNNTGG	2 cut(s)	172, 731
PfoI	TCCNGGA	2 cut(s)	437, 1836
PkrI	GCNGC	2 cut(s)	1058, 1176
PleI	GAGTC	3 cut(s)	1483, 1504, 1759
PpsI	GAGTC	3 cut(s)	1483, 1504, 1759
Ppu21I	YACGTR	1 cut(s)	1209
PpuMI	RGGWCCY	1 cut(s)	215
Psp5II	RGGWCCY	1 cut(s)	215
Psp6I	CCWGG	2 cut(s)	859, 1497
PspFI	CCCAGC	1 cut(s)	269
PspGI	CCWGG	2 cut(s)	859, 1497
PspLI	CGTACG	1 cut(s)	1205
PspN4I	GGNNCC	3 cut(s)	216, 411, 1920
PspPI	GGNCC	2 cut(s)	175, 215
PspPPI	RGGWCCY	1 cut(s)	215
PstI	CTGCAG	1 cut(s)	1342
PsuI	RGATCY	2 cut(s)	868, 1297
PsyI	GACNNNGTC	2 cut(s)	572, 1794
PvuII	CAGCTG	1 cut(s)	1741
RsaI	GTAC	4 cut(s)	662, 1207, 1211, 1417
RsaNI	GTAC	4 cut(s)	661, 1206, 1210, 1416
RseI	CAYNNNNRTG	1 cut(s)	287
SapI	GCTCTTC	2 cut(s)	1569, 1635
SaqAI	TTAA	7 cut(s)	53, 75, 386, 720, 792, 1047, 1700
SatI	GCNGC	2 cut(s)	1057, 1175
Sau3AI	GATC	9 cut(s)	58, 337, 483, 784, 811, 868, 1144, 1297, 1959
Sau96I	GGNCC	2 cut(s)	175, 215
SchI	GAGTC	3 cut(s)	1484, 1504, 1760
ScrFI	CCNGG	5 cut(s)	439, 861, 1499, 1838, 1865
SduI	GDGCHC	1 cut(s)	746
SexAI	ACCWGGT	1 cut(s)	859
SfaNI	GCATC	4 cut(s)	295, 504, 888, 1816
SfcI	CTRYAG	1 cut(s)	1338
SinI	GGWCC	1 cut(s)	215
SmiMI	CAYNNNNRTG	1 cut(s)	287
SmlI	CTYRAG	2 cut(s)	6, 1370
SmoI	CTYRAG	2 cut(s)	6, 1370
SnaBI	TACGTA	1 cut(s)	1209
Sse9I	AATT	7 cut(s)	315, 705, 716, 789, 1092, 1582, 1720
SseBI	AGGCCT	1 cut(s)	48
SsiI	CCGC	3 cut(s)	212, 782, 901
SspI	AATATT	1 cut(s)	198
SspMI	CTAG	6 cut(s)	432, 1103, 1490, 1611, 1685, 1983
StuI	AGGCCT	1 cut(s)	48
StyD4I	CCNGG	5 cut(s)	437, 859, 1497, 1836, 1863
StyI	CCWWGG	3 cut(s)	825, 1020, 1684
TaaI	ACNGT	5 cut(s)	457, 649, 1597, 1694, 1918
TaiI	ACGT	3 cut(s)	465, 1211, 1667
TaqI	TCGA	7 cut(s)	67, 313, 321, 1120, 1290, 1567, 1572
TasI	AATT	7 cut(s)	315, 705, 716, 789, 1092, 1582, 1720
TatI	WGTACW	2 cut(s)	660, 1415
TfiI	GAWTC	7 cut(s)	26, 86, 112, 875, 1222, 1366, 1569
Tru1I	TTAA	7 cut(s)	53, 75, 386, 720, 792, 1047, 1700
Tru9I	TTAA	7 cut(s)	53, 75, 386, 720, 792, 1047, 1700
TscAI	CASTG	2 cut(s)	997, 1342
TseFI	GTSAC	4 cut(s)	547, 943, 1383, 1507
TseI	GCWGC	2 cut(s)	1056, 1174
Tsp45I	GTSAC	4 cut(s)	547, 943, 1383, 1507
TspDTI	ATGAA	2 cut(s)	1182, 1663
TspGWI	ACGGA	2 cut(s)	146, 204
TspRI	CASTG	2 cut(s)	997, 1342
Tth111I	GACNNNGTC	2 cut(s)	572, 1794
Van91I	CCANNNNNTGG	2 cut(s)	172, 731
VpaK11BI	GGWCC	1 cut(s)	215
XagI	CCTNNNNNAGG	1 cut(s)	1292
XapI	RAATTY	2 cut(s)	716, 1582
XmaJI	CCTAGG	1 cut(s)	1684
XmnI	GAANNNNTTC	3 cut(s)	85, 140, 1221
XspI	CTAG	6 cut(s)	432, 1103, 1490, 1611, 1685, 1983
ZraI	GACGTC	1 cut(s)	463
Zsp2I	ATGCAT	1 cut(s)	1809

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.