zinc finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G26610 |
| fragaria_vesca | FvH4_4g30350 |
| malus_domestica | MD13G1064600.v1.1 MD16G1063100.v1.1 |
| prunus_persica | Prupe.1G283600_v2.0.a1 |
| pyrus_communis | pycom13g05700 pycom16g05530 |
| rosa_chinensis | RchiOBHm_Chr4g0438641 |
| rosa_laevigata | RLG00000006345 |
| rosa_multiflora | Rmu_co8449659.1_g000001 Rmu_sc0006646.1_g000008 |
| rosa_roxburghii | Rroxscaffold_5G00379630 |
| rosa_rugosa | Rorug04G0312100 |
| rosa_samantha | Rh4AG362500 Rh4BG373900 Rh4CG387800 Rh4DG368600 |
| rosa_wichuraiana | Rw0G007120 Rw0G016670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 652 |
| AccIII | TCCGGA | 1 cut(s) | 878 |
| AciI | CCGC | 1 cut(s) | 1112 |
| AclWI | GGATC | 7 cut(s) | 225, 411, 870, 877, 883, 973, 979 |
| AcsI | RAATTY | 1 cut(s) | 103 |
| AcuI | CTGAAG | 3 cut(s) | 636, 781, 1198 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1031 |
| AgsI | TTSAA | 7 cut(s) | 13, 269, 676, 692, 886, 1225, 1301 |
| Alw26I | GTCTC | 2 cut(s) | 632, 1152 |
| AlwI | GGATC | 7 cut(s) | 225, 411, 870, 877, 883, 973, 979 |
| Aor13HI | TCCGGA | 1 cut(s) | 878 |
| ApeKI | GCWGC | 6 cut(s) | 247, 250, 253, 256, 274, 452 |
| ApoI | RAATTY | 1 cut(s) | 103 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 923 |
| AspS9I | GGNCC | 1 cut(s) | 806 |
| AsuHPI | GGTGA | 6 cut(s) | 434, 668, 755, 767, 1094, 1306 |
| AvaII | GGWCC | 1 cut(s) | 806 |
| BamHI | GGATCC | 1 cut(s) | 875 |
| BauI | CACGAG | 1 cut(s) | 1196 |
| BbvI | GCAGC | 6 cut(s) | 259, 261, 262, 265, 268, 439 |
| BccI | CCATC | 1 cut(s) | 833 |
| BcoDI | GTCTC | 2 cut(s) | 632, 1152 |
| BfaI | CTAG | 2 cut(s) | 171, 576 |
| BfmI | CTRYAG | 1 cut(s) | 40 |
| BfuAI | ACCTGC | 1 cut(s) | 652 |
| BisI | GCNGC | 6 cut(s) | 248, 251, 254, 257, 275, 453 |
| BlsI | GCNGC | 6 cut(s) | 249, 252, 255, 258, 276, 454 |
| Bme18I | GGWCC | 1 cut(s) | 806 |
| BmgT120I | GGNCC | 1 cut(s) | 806 |
| BmiI | GGNNCC | 1 cut(s) | 877 |
| BmsI | GCATC | 3 cut(s) | 499, 549, 1311 |
| BpuEI | CTTGAG | 2 cut(s) | 125, 656 |
| Bsa29I | ATCGAT | 1 cut(s) | 1335 |
| BsaBI | GATNNNNATC | 3 cut(s) | 874, 970, 1341 |
| BsaWI | WCCGGW | 1 cut(s) | 878 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1031 |
| Bse8I | GATNNNNATC | 3 cut(s) | 874, 970, 1341 |
| BseAI | TCCGGA | 1 cut(s) | 878 |
| BseCI | ATCGAT | 1 cut(s) | 1335 |
| BseJI | GATNNNNATC | 3 cut(s) | 874, 970, 1341 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1031 |
| BseMII | CTCAG | 7 cut(s) | 173, 339, 378, 507, 597, 837, 992 |
| BseXI | GCAGC | 6 cut(s) | 259, 261, 262, 265, 268, 439 |
| BshVI | ATCGAT | 1 cut(s) | 1335 |
| BsiSI | CCGG | 1 cut(s) | 879 |
| BslFI | GGGAC | 1 cut(s) | 926 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1031 |
| BsmAI | GTCTC | 2 cut(s) | 632, 1152 |
| BsmFI | GGGAC | 1 cut(s) | 926 |
| Bsp13I | TCCGGA | 1 cut(s) | 878 |
| Bsp143I | GATC | 9 cut(s) | 217, 416, 869, 875, 965, 971, 997, 1256, 1336 |
| BspACI | CCGC | 1 cut(s) | 1112 |
| BspCNI | CTCAG | 7 cut(s) | 174, 340, 379, 508, 598, 836, 993 |
| BspDI | ATCGAT | 1 cut(s) | 1335 |
| BspEI | TCCGGA | 1 cut(s) | 878 |
| BspHI | TCATGA | 1 cut(s) | 1315 |
| BspLI | GGNNCC | 1 cut(s) | 877 |
| BspMI | ACCTGC | 1 cut(s) | 652 |
| BspPI | GGATC | 7 cut(s) | 225, 411, 870, 877, 883, 973, 979 |
| BssMI | GATC | 9 cut(s) | 217, 416, 869, 875, 965, 971, 997, 1256, 1336 |
| BssSI | CACGAG | 1 cut(s) | 1196 |
| Bst2BI | CACGAG | 1 cut(s) | 1196 |
| Bst4CI | ACNGT | 2 cut(s) | 1079, 1172 |
| Bst6I | CTCTTC | 1 cut(s) | 687 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1172 |
| BstDEI | CTNAG | 8 cut(s) | 182, 348, 387, 516, 606, 642, 823, 1001 |
| BstKTI | GATC | 9 cut(s) | 220, 419, 872, 878, 968, 974, 1000, 1259, 1339 |
| BstMAI | GTCTC | 2 cut(s) | 632, 1152 |
| BstMBI | GATC | 9 cut(s) | 217, 416, 869, 875, 965, 971, 997, 1256, 1336 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 253, 256, 1172 |
| BstSFI | CTRYAG | 1 cut(s) | 40 |
| BstV1I | GCAGC | 6 cut(s) | 259, 261, 262, 265, 268, 439 |
| BstX2I | RGATCY | 3 cut(s) | 416, 869, 875 |
| BstYI | RGATCY | 3 cut(s) | 416, 869, 875 |
| Bsu15I | ATCGAT | 1 cut(s) | 1335 |
| BsuTUI | ATCGAT | 1 cut(s) | 1335 |
| BtsIMutI | CAGTG | 2 cut(s) | 1059, 1084 |
| BveI | ACCTGC | 1 cut(s) | 652 |
| CciI | TCATGA | 1 cut(s) | 1315 |
| Cfr13I | GGNCC | 1 cut(s) | 806 |
| ClaI | ATCGAT | 1 cut(s) | 1335 |
| CseI | GACGC | 1 cut(s) | 266 |
| CviAII | CATG | 5 cut(s) | 94, 334, 916, 1031, 1316 |
| DdeI | CTNAG | 8 cut(s) | 182, 348, 387, 516, 606, 642, 823, 1001 |
| DpnI | GATC | 9 cut(s) | 219, 418, 871, 877, 967, 973, 999, 1258, 1338 |
| DpnII | GATC | 9 cut(s) | 217, 416, 869, 875, 965, 971, 997, 1256, 1336 |
| Eam1104I | CTCTTC | 1 cut(s) | 687 |
| EarI | CTCTTC | 1 cut(s) | 687 |
| Eco47I | GGWCC | 1 cut(s) | 806 |
| Eco57I | CTGAAG | 3 cut(s) | 636, 781, 1198 |
| EcoRI | GAATTC | 1 cut(s) | 103 |
| EcoT22I | ATGCAT | 1 cut(s) | 1326 |
| FaeI | CATG | 5 cut(s) | 97, 337, 919, 1034, 1319 |
| FaqI | GGGAC | 1 cut(s) | 926 |
| FatI | CATG | 5 cut(s) | 93, 333, 915, 1030, 1315 |
| Fnu4HI | GCNGC | 6 cut(s) | 248, 251, 254, 257, 275, 453 |
| Fsp4HI | GCNGC | 6 cut(s) | 248, 251, 254, 257, 275, 453 |
| FspBI | CTAG | 2 cut(s) | 171, 576 |
| GluI | GCNGC | 6 cut(s) | 248, 251, 254, 257, 275, 453 |
| HapII | CCGG | 1 cut(s) | 879 |
| HgaI | GACGC | 1 cut(s) | 266 |
| Hin1II | CATG | 5 cut(s) | 97, 337, 919, 1034, 1319 |
| HindIII | AAGCTT | 1 cut(s) | 1236 |
| HpaII | CCGG | 1 cut(s) | 879 |
| HphI | GGTGA | 6 cut(s) | 434, 668, 755, 767, 1094, 1306 |
| Hpy166II | GTNNAC | 1 cut(s) | 1059 |
| Hpy8I | GTNNAC | 1 cut(s) | 1059 |
| Hpy99I | CGWCG | 1 cut(s) | 282 |
| HpyAV | CCTTC | 3 cut(s) | 925, 941, 1035 |
| HpyCH4III | ACNGT | 2 cut(s) | 1079, 1172 |
| HpyCH4V | TGCA | 3 cut(s) | 285, 1175, 1324 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 253, 256, 1172 |
| HpyF3I | CTNAG | 8 cut(s) | 182, 348, 387, 516, 606, 642, 823, 1001 |
| Hsp92II | CATG | 5 cut(s) | 97, 337, 919, 1034, 1319 |
| Kpn2I | TCCGGA | 1 cut(s) | 878 |
| Kzo9I | GATC | 9 cut(s) | 217, 416, 869, 875, 965, 971, 997, 1256, 1336 |
| LmnI | GCTCC | 3 cut(s) | 4, 896, 1357 |
| Lsp1109I | GCAGC | 6 cut(s) | 259, 261, 262, 265, 268, 439 |
| LweI | GCATC | 3 cut(s) | 499, 549, 1311 |
| MaeI | CTAG | 2 cut(s) | 171, 576 |
| MaeIII | GTNAC | 5 cut(s) | 77, 329, 341, 1193, 1247 |
| MalI | GATC | 9 cut(s) | 219, 418, 871, 877, 967, 973, 999, 1258, 1338 |
| MboI | GATC | 9 cut(s) | 217, 416, 869, 875, 965, 971, 997, 1256, 1336 |
| MflI | RGATCY | 3 cut(s) | 416, 869, 875 |
| MluCI | AATT | 2 cut(s) | 103, 778 |
| MlyI | GAGTC | 4 cut(s) | 617, 779, 815, 1097 |
| MmeI | TCCRAC | 1 cut(s) | 798 |
| Mph1103I | ATGCAT | 1 cut(s) | 1326 |
| MroI | TCCGGA | 1 cut(s) | 878 |
| MroXI | GAANNNNTTC | 1 cut(s) | 923 |
| MseI | TTAA | 3 cut(s) | 582, 666, 1158 |
| MslI | CAYNNNNRTG | 1 cut(s) | 96 |
| MspA1I | CMGCKG | 1 cut(s) | 110 |
| MspI | CCGG | 1 cut(s) | 879 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 253, 256, 1172 |
| NdeII | GATC | 9 cut(s) | 217, 416, 869, 875, 965, 971, 997, 1256, 1336 |
| NlaIII | CATG | 5 cut(s) | 97, 337, 919, 1034, 1319 |
| NlaIV | GGNNCC | 1 cut(s) | 877 |
| NmuCI | GTSAC | 5 cut(s) | 77, 329, 341, 1193, 1247 |
| NsiI | ATGCAT | 1 cut(s) | 1326 |
| PagI | TCATGA | 1 cut(s) | 1315 |
| PdmI | GAANNNNTTC | 1 cut(s) | 923 |
| PflFI | GACNNNGTC | 1 cut(s) | 643 |
| PkrI | GCNGC | 6 cut(s) | 249, 252, 255, 258, 276, 454 |
| PleI | GAGTC | 4 cut(s) | 616, 779, 815, 1097 |
| PpsI | GAGTC | 4 cut(s) | 616, 779, 815, 1097 |
| PspN4I | GGNNCC | 1 cut(s) | 877 |
| PspPI | GGNCC | 1 cut(s) | 806 |
| PsuI | RGATCY | 3 cut(s) | 416, 869, 875 |
| PsyI | GACNNNGTC | 1 cut(s) | 643 |
| PvuII | CAGCTG | 1 cut(s) | 110 |
| RseI | CAYNNNNRTG | 1 cut(s) | 96 |
| SaqAI | TTAA | 3 cut(s) | 582, 666, 1158 |
| SatI | GCNGC | 6 cut(s) | 248, 251, 254, 257, 275, 453 |
| Sau3AI | GATC | 9 cut(s) | 217, 416, 869, 875, 965, 971, 997, 1256, 1336 |
| Sau96I | GGNCC | 1 cut(s) | 806 |
| SchI | GAGTC | 4 cut(s) | 617, 779, 815, 1097 |
| SfaNI | GCATC | 3 cut(s) | 499, 549, 1311 |
| SfcI | CTRYAG | 1 cut(s) | 40 |
| SinI | GGWCC | 1 cut(s) | 806 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 96 |
| SmlI | CTYRAG | 2 cut(s) | 140, 635 |
| SmoI | CTYRAG | 2 cut(s) | 140, 635 |
| Sse9I | AATT | 2 cut(s) | 103, 778 |
| SsiI | CCGC | 1 cut(s) | 1112 |
| SspMI | CTAG | 2 cut(s) | 171, 576 |
| TaaI | ACNGT | 2 cut(s) | 1079, 1172 |
| TaqI | TCGA | 2 cut(s) | 566, 1335 |
| TasI | AATT | 2 cut(s) | 103, 778 |
| Tru1I | TTAA | 3 cut(s) | 582, 666, 1158 |
| Tru9I | TTAA | 3 cut(s) | 582, 666, 1158 |
| TscAI | CASTG | 2 cut(s) | 1066, 1084 |
| TseFI | GTSAC | 5 cut(s) | 77, 329, 341, 1193, 1247 |
| TseI | GCWGC | 6 cut(s) | 247, 250, 253, 256, 274, 452 |
| Tsp45I | GTSAC | 5 cut(s) | 77, 329, 341, 1193, 1247 |
| TspDTI | ATGAA | 8 cut(s) | 110, 135, 168, 497, 752, 932, 1127, 1255 |
| TspRI | CASTG | 2 cut(s) | 1066, 1084 |
| Tth111I | GACNNNGTC | 1 cut(s) | 643 |
| VpaK11BI | GGWCC | 1 cut(s) | 806 |
| XapI | RAATTY | 1 cut(s) | 103 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 737 |
| XmnI | GAANNNNTTC | 1 cut(s) | 923 |
| XspI | CTAG | 2 cut(s) | 171, 576 |
| Zsp2I | ATGCAT | 1 cut(s) | 1326 |