Trypsin-like peptidase domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G28320 |
| fragaria_vesca | FvH4_3g08860 FvH4_3g08860 FvH4_3g08860 |
| malus_domestica | MD10G1291600.v1.1 |
| prunus_persica | Prupe.4G050600_v2.0.a1 Prupe.4G050600_v2.0.a1 Prupe.4G050600_v2.0.a1 |
| pyrus_communis | pycom10g24380 |
| rosa_chinensis | RchiOBHm_Chr5g0008891 RchiOBHm_Chr5g0008901 |
| rosa_laevigata | RLG00000022692 RLG00000031614 |
| rosa_multiflora | Rmu_co8519179.1_g000001 Rmu_sc0004677.1_g000010 |
| rosa_roxburghii | Rroxscaffold_1G00067110 Rroxscaffold_1G00067730 |
| rosa_rugosa | Rorug04G0440000 Rorug04G0440000 |
| rosa_samantha | Rh5AG068700 Rh5BG065400 Rh5CG076600 Rh5DG064400 |
| rosa_wichuraiana | Rw5G006430 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1185 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1981 |
| Acc16I | TGCGCA | 1 cut(s) | 390 |
| Acc36I | ACCTGC | 1 cut(s) | 1185 |
| AccB1I | GGYRCC | 1 cut(s) | 1858 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1595 |
| AccBSI | CCGCTC | 1 cut(s) | 1808 |
| AciI | CCGC | 4 cut(s) | 915, 1698, 1808, 1823 |
| AclWI | GGATC | 9 cut(s) | 62, 152, 293, 306, 783, 796, 1894, 2047, 2107 |
| AcoI | YGGCCR | 2 cut(s) | 594, 1765 |
| AcsI | RAATTY | 5 cut(s) | 34, 661, 924, 1253, 1274 |
| AcuI | CTGAAG | 2 cut(s) | 1358, 1819 |
| AfaI | GTAC | 1 cut(s) | 1552 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 838, 1547, 1595 |
| AflII | CTTAAG | 1 cut(s) | 634 |
| AflIII | ACRYGT | 2 cut(s) | 1396, 2076 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1431 |
| AhlI | ACTAGT | 1 cut(s) | 278 |
| AjnI | CCWGG | 4 cut(s) | 222, 832, 1501, 1729 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1261, 1293 |
| Alw26I | GTCTC | 5 cut(s) | 833, 1160, 1383, 1989, 2060 |
| AlwI | GGATC | 9 cut(s) | 62, 152, 293, 306, 783, 796, 1894, 2047, 2107 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 140, 1721 |
| AoxI | GGCC | 4 cut(s) | 61, 219, 594, 1765 |
| ApeKI | GCWGC | 7 cut(s) | 185, 428, 506, 966, 976, 1486, 1718 |
| ApoI | RAATTY | 5 cut(s) | 34, 661, 924, 1253, 1274 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 724 |
| AspLEI | GCGC | 2 cut(s) | 391, 1561 |
| AspS9I | GGNCC | 3 cut(s) | 62, 220, 1586 |
| AsuC2I | CCSGG | 2 cut(s) | 31, 318 |
| AsuHPI | GGTGA | 8 cut(s) | 188, 316, 698, 720, 1166, 1229, 1403, 1959 |
| AsuII | TTCGAA | 1 cut(s) | 464 |
| AvaII | GGWCC | 1 cut(s) | 1586 |
| BaeGI | GKGCMC | 1 cut(s) | 873 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 681, 714 |
| BalI | TGGCCA | 2 cut(s) | 596, 1767 |
| BamHI | GGATCC | 2 cut(s) | 298, 788 |
| BanI | GGYRCC | 1 cut(s) | 1858 |
| BanII | GRGCYC | 1 cut(s) | 850 |
| BbvI | GCAGC | 7 cut(s) | 172, 415, 493, 963, 978, 1498, 1705 |
| BccI | CCATC | 6 cut(s) | 471, 997, 1078, 1109, 1966, 2009 |
| BceAI | ACGGC | 2 cut(s) | 26, 1171 |
| BciT130I | CCWGG | 4 cut(s) | 224, 834, 1503, 1731 |
| BclI | TGATCA | 1 cut(s) | 1915 |
| BcnI | CCSGG | 2 cut(s) | 31, 318 |
| BcoDI | GTCTC | 5 cut(s) | 833, 1160, 1383, 1989, 2060 |
| BcuI | ACTAGT | 1 cut(s) | 278 |
| BfaI | CTAG | 8 cut(s) | 279, 623, 704, 1050, 1415, 1490, 1923, 2118 |
| BfmI | CTRYAG | 2 cut(s) | 993, 1484 |
| BfrI | CTTAAG | 1 cut(s) | 634 |
| BfuAI | ACCTGC | 1 cut(s) | 1185 |
| BisI | GCNGC | 8 cut(s) | 186, 429, 507, 916, 967, 977, 1487, 1719 |
| BlsI | GCNGC | 8 cut(s) | 187, 430, 508, 917, 968, 978, 1488, 1720 |
| Bme1390I | CCNGG | 6 cut(s) | 31, 224, 318, 834, 1503, 1731 |
| Bme18I | GGWCC | 1 cut(s) | 1586 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1431 |
| BmgT120I | GGNCC | 3 cut(s) | 62, 220, 1586 |
| BmiI | GGNNCC | 9 cut(s) | 300, 384, 763, 790, 849, 939, 987, 1246, 1860 |
| BmrFI | CCNGG | 6 cut(s) | 31, 224, 318, 834, 1503, 1731 |
| BmrI | ACTGGG | 2 cut(s) | 653, 1389 |
| BmsI | GCATC | 7 cut(s) | 248, 549, 1036, 1735, 1834, 1848, 1944 |
| BmuI | ACTGGG | 2 cut(s) | 653, 1389 |
| BpmI | CTGGAG | 1 cut(s) | 1641 |
| Bpu10I | CCTNAGC | 1 cut(s) | 189 |
| Bpu14I | TTCGAA | 1 cut(s) | 464 |
| BpuEI | CTTGAG | 3 cut(s) | 1001, 1202, 1662 |
| BpuMI | CCSGG | 2 cut(s) | 31, 318 |
| BsaAI | YACGTR | 1 cut(s) | 1397 |
| BsaI | GGTCTC | 2 cut(s) | 1160, 2060 |
| BsaJI | CCNNGG | 8 cut(s) | 222, 832, 941, 1187, 1248, 1263, 1304, 1501 |
| BsaWI | WCCGGW | 2 cut(s) | 301, 850 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 838, 1547, 1595 |
| Bse1I | ACTGG | 3 cut(s) | 648, 763, 1384 |
| Bse3DI | GCAATG | 4 cut(s) | 127, 765, 1298, 2058 |
| BseBI | CCWGG | 4 cut(s) | 224, 834, 1503, 1731 |
| BseDI | CCNNGG | 8 cut(s) | 222, 832, 941, 1187, 1248, 1263, 1304, 1501 |
| BseGI | GGATG | 5 cut(s) | 10, 482, 1726, 1839, 1937 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 838, 1547, 1595 |
| BseMI | GCAATG | 4 cut(s) | 127, 765, 1298, 2058 |
| BseMII | CTCAG | 4 cut(s) | 308, 533, 1968, 2057 |
| BseNI | ACTGG | 3 cut(s) | 648, 763, 1384 |
| BseRI | GAGGAG | 2 cut(s) | 1530, 1666 |
| BseSI | GKGCMC | 1 cut(s) | 873 |
| BseXI | GCAGC | 7 cut(s) | 172, 415, 493, 963, 978, 1498, 1705 |
| BsgI | GTGCAG | 3 cut(s) | 414, 1044, 1869 |
| BshFI | GGCC | 4 cut(s) | 63, 221, 596, 1767 |
| BshNI | GGYRCC | 1 cut(s) | 1858 |
| BsiSI | CCGG | 4 cut(s) | 31, 302, 317, 851 |
| BslFI | GGGAC | 4 cut(s) | 398, 614, 1484, 1825 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 838, 1547, 1595 |
| BsmAI | GTCTC | 5 cut(s) | 833, 1160, 1383, 1989, 2060 |
| BsmFI | GGGAC | 4 cut(s) | 398, 614, 1484, 1825 |
| BsnI | GGCC | 4 cut(s) | 63, 221, 596, 1767 |
| Bso31I | GGTCTC | 2 cut(s) | 1160, 2060 |
| Bsp119I | TTCGAA | 1 cut(s) | 464 |
| Bsp1286I | GDGCHC | 2 cut(s) | 850, 873 |
| Bsp143I | GATC | 8 cut(s) | 67, 144, 298, 788, 1899, 1915, 2039, 2112 |
| Bsp19I | CCATGG | 1 cut(s) | 941 |
| BspACI | CCGC | 4 cut(s) | 915, 1698, 1808, 1823 |
| BspANI | GGCC | 4 cut(s) | 63, 221, 596, 1767 |
| BspCNI | CTCAG | 4 cut(s) | 307, 532, 1969, 2056 |
| BspLI | GGNNCC | 9 cut(s) | 300, 384, 763, 790, 849, 939, 987, 1246, 1860 |
| BspMAI | CTGCAG | 1 cut(s) | 1488 |
| BspMI | ACCTGC | 1 cut(s) | 1185 |
| BspPI | GGATC | 9 cut(s) | 62, 152, 293, 306, 783, 796, 1894, 2047, 2107 |
| BspT104I | TTCGAA | 1 cut(s) | 464 |
| BspT107I | GGYRCC | 1 cut(s) | 1858 |
| BspTI | CTTAAG | 1 cut(s) | 634 |
| BspTNI | GGTCTC | 2 cut(s) | 1160, 2060 |
| BsrBI | CCGCTC | 1 cut(s) | 1808 |
| BsrDI | GCAATG | 4 cut(s) | 127, 765, 1298, 2058 |
| BsrI | ACTGG | 3 cut(s) | 648, 763, 1384 |
| BssECI | CCNNGG | 8 cut(s) | 222, 832, 941, 1187, 1248, 1263, 1304, 1501 |
| BssMI | GATC | 8 cut(s) | 67, 144, 298, 788, 1899, 1915, 2039, 2112 |
| BssT1I | CCWWGG | 1 cut(s) | 941 |
| Bst2UI | CCWGG | 4 cut(s) | 224, 834, 1503, 1731 |
| Bst4CI | ACNGT | 3 cut(s) | 235, 1108, 1816 |
| Bst6I | CTCTTC | 2 cut(s) | 1283, 1586 |
| BstAFI | CTTAAG | 1 cut(s) | 634 |
| BstBAI | YACGTR | 1 cut(s) | 1397 |
| BstBI | TTCGAA | 1 cut(s) | 464 |
| BstC8I | GCNNGC | 3 cut(s) | 96, 551, 964 |
| BstDSI | CCRYGG | 4 cut(s) | 941, 1187, 1263, 1304 |
| BstF5I | GGATG | 5 cut(s) | 10, 482, 1726, 1839, 1937 |
| BstHHI | GCGC | 2 cut(s) | 391, 1561 |
| BstKTI | GATC | 8 cut(s) | 70, 147, 301, 791, 1902, 1918, 2042, 2115 |
| BstMAI | GTCTC | 5 cut(s) | 833, 1160, 1383, 1989, 2060 |
| BstMBI | GATC | 8 cut(s) | 67, 144, 298, 788, 1899, 1915, 2039, 2112 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 559, 602, 1067, 1856, 2095 |
| BstNI | CCWGG | 4 cut(s) | 224, 834, 1503, 1731 |
| BstNSI | RCATGY | 3 cut(s) | 98, 1565, 2080 |
| BstSCI | CCNGG | 6 cut(s) | 29, 222, 316, 832, 1501, 1729 |
| BstSFI | CTRYAG | 2 cut(s) | 993, 1484 |
| BstSLI | GKGCMC | 1 cut(s) | 873 |
| BstV1I | GCAGC | 7 cut(s) | 172, 415, 493, 963, 978, 1498, 1705 |
| BstX2I | RGATCY | 4 cut(s) | 144, 298, 788, 2039 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 613, 1775 |
| BstYI | RGATCY | 4 cut(s) | 144, 298, 788, 2039 |
| BsuRI | GGCC | 4 cut(s) | 63, 221, 596, 1767 |
| BtgI | CCRYGG | 4 cut(s) | 941, 1187, 1263, 1304 |
| BtgZI | GCGATG | 1 cut(s) | 1097 |
| BtsCI | GGATG | 5 cut(s) | 10, 482, 1726, 1839, 1937 |
| BtsI | GCAGTG | 1 cut(s) | 1744 |
| BtsIMutI | CAGTG | 3 cut(s) | 803, 1019, 1744 |
| BveI | ACCTGC | 1 cut(s) | 1185 |
| Cac8I | GCNNGC | 3 cut(s) | 96, 551, 964 |
| CaiI | CAGNNNCTG | 2 cut(s) | 140, 1721 |
| CfoI | GCGC | 2 cut(s) | 391, 1561 |
| Cfr13I | GGNCC | 3 cut(s) | 62, 220, 1586 |
| Csp6I | GTAC | 1 cut(s) | 1551 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1744, 1779 |
| CviQI | GTAC | 1 cut(s) | 1551 |
| DpnI | GATC | 8 cut(s) | 69, 146, 300, 790, 1901, 1917, 2041, 2114 |
| DpnII | GATC | 8 cut(s) | 67, 144, 298, 788, 1899, 1915, 2039, 2112 |
| DraI | TTTAAA | 1 cut(s) | 1228 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1981 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1431 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1981 |
| EaeI | YGGCCR | 2 cut(s) | 594, 1765 |
| Eam1104I | CTCTTC | 2 cut(s) | 1283, 1586 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1431 |
| EarI | CTCTTC | 2 cut(s) | 1283, 1586 |
| Eco130I | CCWWGG | 1 cut(s) | 941 |
| Eco24I | GRGCYC | 1 cut(s) | 850 |
| Eco31I | GGTCTC | 2 cut(s) | 1160, 2060 |
| Eco47I | GGWCC | 1 cut(s) | 1586 |
| Eco57I | CTGAAG | 2 cut(s) | 1358, 1819 |
| EcoO109I | RGGNCCY | 1 cut(s) | 62 |
| EcoRII | CCWGG | 4 cut(s) | 222, 832, 1501, 1729 |
| EcoT14I | CCWWGG | 1 cut(s) | 941 |
| EcoT38I | GRGCYC | 1 cut(s) | 850 |
| ErhI | CCWWGG | 1 cut(s) | 941 |
| FaqI | GGGAC | 4 cut(s) | 398, 614, 1484, 1825 |
| FauI | CCCGC | 2 cut(s) | 1705, 1801 |
| FauNDI | CATATG | 1 cut(s) | 1770 |
| FbaI | TGATCA | 1 cut(s) | 1915 |
| Fnu4HI | GCNGC | 8 cut(s) | 186, 429, 507, 916, 967, 977, 1487, 1719 |
| FokI | GGATG | 5 cut(s) | 17, 489, 1713, 1826, 1924 |
| FriOI | GRGCYC | 1 cut(s) | 850 |
| Fsp4HI | GCNGC | 8 cut(s) | 186, 429, 507, 916, 967, 977, 1487, 1719 |
| FspBI | CTAG | 8 cut(s) | 279, 623, 704, 1050, 1415, 1490, 1923, 2118 |
| FspI | TGCGCA | 1 cut(s) | 390 |
| GlaI | GCGC | 2 cut(s) | 390, 1560 |
| GluI | GCNGC | 8 cut(s) | 186, 429, 507, 916, 967, 977, 1487, 1719 |
| GsuI | CTGGAG | 1 cut(s) | 1641 |
| HaeIII | GGCC | 4 cut(s) | 63, 221, 596, 1767 |
| HapII | CCGG | 4 cut(s) | 31, 302, 317, 851 |
| HhaI | GCGC | 2 cut(s) | 391, 1561 |
| Hin6I | GCGC | 2 cut(s) | 389, 1559 |
| HinP1I | GCGC | 2 cut(s) | 389, 1559 |
| HincII | GTYRAC | 2 cut(s) | 650, 736 |
| HindII | GTYRAC | 2 cut(s) | 650, 736 |
| HindIII | AAGCTT | 3 cut(s) | 308, 450, 2096 |
| HinfI | GANTC | 7 cut(s) | 470, 627, 720, 1088, 1291, 1418, 1578 |
| HpaI | GTTAAC | 1 cut(s) | 736 |
| HpaII | CCGG | 4 cut(s) | 31, 302, 317, 851 |
| HphI | GGTGA | 8 cut(s) | 188, 316, 698, 720, 1166, 1229, 1403, 1959 |
| Hpy166II | GTNNAC | 4 cut(s) | 641, 650, 736, 1642 |
| Hpy188I | TCNGA | 4 cut(s) | 361, 1045, 1377, 1586 |
| Hpy188III | TCNNGA | 6 cut(s) | 212, 296, 474, 786, 1620, 1679 |
| Hpy8I | GTNNAC | 4 cut(s) | 641, 650, 736, 1642 |
| HpyCH4III | ACNGT | 3 cut(s) | 235, 1108, 1816 |
| HpyCH4IV | ACGT | 2 cut(s) | 1396, 1443 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 559, 602, 1067, 1856, 2095 |
| HpySE526I | ACGT | 2 cut(s) | 1396, 1443 |
| HspAI | GCGC | 2 cut(s) | 389, 1559 |
| Ksp22I | TGATCA | 1 cut(s) | 1915 |
| KspAI | GTTAAC | 1 cut(s) | 736 |
| Kzo9I | GATC | 8 cut(s) | 67, 144, 298, 788, 1899, 1915, 2039, 2112 |
| LmnI | GCTCC | 8 cut(s) | 376, 853, 947, 1020, 1244, 1318, 1515, 1805 |
| Lsp1109I | GCAGC | 7 cut(s) | 172, 415, 493, 963, 978, 1498, 1705 |
| LweI | GCATC | 7 cut(s) | 248, 549, 1036, 1735, 1834, 1848, 1944 |
| MaeI | CTAG | 8 cut(s) | 279, 623, 704, 1050, 1415, 1490, 1923, 2118 |
| MaeII | ACGT | 2 cut(s) | 1396, 1443 |
| MaeIII | GTNAC | 5 cut(s) | 269, 801, 1409, 1783, 2004 |
| MalI | GATC | 8 cut(s) | 69, 146, 300, 790, 1901, 1917, 2041, 2114 |
| MbiI | CCGCTC | 1 cut(s) | 1808 |
| MboI | GATC | 8 cut(s) | 67, 144, 298, 788, 1899, 1915, 2039, 2112 |
| MflI | RGATCY | 4 cut(s) | 144, 298, 788, 2039 |
| MhlI | GDGCHC | 2 cut(s) | 850, 873 |
| MlsI | TGGCCA | 2 cut(s) | 596, 1767 |
| MluNI | TGGCCA | 2 cut(s) | 596, 1767 |
| MlyI | GAGTC | 3 cut(s) | 636, 1300, 1572 |
| MmeI | TCCRAC | 3 cut(s) | 1318, 1537, 1549 |
| MnlI | CCTC | 8 cut(s) | 81, 172, 337, 976, 1185, 1243, 1551, 1644 |
| Mox20I | TGGCCA | 2 cut(s) | 596, 1767 |
| MroXI | GAANNNNTTC | 1 cut(s) | 724 |
| MscI | TGGCCA | 2 cut(s) | 596, 1767 |
| MseI | TTAA | 8 cut(s) | 260, 635, 735, 744, 875, 1038, 1143, 1227 |
| MslI | CAYNNNNRTG | 3 cut(s) | 611, 1397, 1731 |
| Msp20I | TGGCCA | 2 cut(s) | 596, 1767 |
| MspA1I | CMGCKG | 2 cut(s) | 931, 1718 |
| MspCI | CTTAAG | 1 cut(s) | 634 |
| MspI | CCGG | 4 cut(s) | 31, 302, 317, 851 |
| MspR9I | CCNGG | 6 cut(s) | 31, 224, 318, 834, 1503, 1731 |
| MvaI | CCWGG | 4 cut(s) | 224, 834, 1503, 1731 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 559, 602, 1067, 1856, 2095 |
| NciI | CCSGG | 2 cut(s) | 31, 318 |
| NcoI | CCATGG | 1 cut(s) | 941 |
| NdeI | CATATG | 1 cut(s) | 1770 |
| NdeII | GATC | 8 cut(s) | 67, 144, 298, 788, 1899, 1915, 2039, 2112 |
| NlaIV | GGNNCC | 9 cut(s) | 300, 384, 763, 790, 849, 939, 987, 1246, 1860 |
| NmeAIII | GCCGAG | 1 cut(s) | 1273 |
| NmuCI | GTSAC | 3 cut(s) | 269, 801, 1409 |
| NsbI | TGCGCA | 1 cut(s) | 390 |
| NspI | RCATGY | 3 cut(s) | 98, 1565, 2080 |
| NspV | TTCGAA | 1 cut(s) | 464 |
| PaeI | GCATGC | 1 cut(s) | 98 |
| PaqCI | CACCTGC | 1 cut(s) | 1185 |
| PciI | ACATGT | 1 cut(s) | 2076 |
| PdmI | GAANNNNTTC | 1 cut(s) | 724 |
| PfeI | GAWTC | 4 cut(s) | 470, 720, 1088, 1418 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1595 |
| PfoI | TCCNGGA | 1 cut(s) | 29 |
| PkrI | GCNGC | 8 cut(s) | 187, 430, 508, 917, 968, 978, 1488, 1720 |
| PleI | GAGTC | 3 cut(s) | 635, 1299, 1572 |
| PpsI | GAGTC | 3 cut(s) | 635, 1299, 1572 |
| Ppu21I | YACGTR | 1 cut(s) | 1397 |
| PscI | ACATGT | 1 cut(s) | 2076 |
| Psp6I | CCWGG | 4 cut(s) | 222, 832, 1501, 1729 |
| PspGI | CCWGG | 4 cut(s) | 222, 832, 1501, 1729 |
| PspN4I | GGNNCC | 9 cut(s) | 300, 384, 763, 790, 849, 939, 987, 1246, 1860 |
| PspPI | GGNCC | 3 cut(s) | 62, 220, 1586 |
| PstI | CTGCAG | 1 cut(s) | 1488 |
| PstNI | CAGNNNCTG | 2 cut(s) | 140, 1721 |
| PsuI | RGATCY | 4 cut(s) | 144, 298, 788, 2039 |
| PvuII | CAGCTG | 2 cut(s) | 931, 1718 |
| RsaI | GTAC | 1 cut(s) | 1552 |
| RsaNI | GTAC | 1 cut(s) | 1551 |
| RseI | CAYNNNNRTG | 3 cut(s) | 611, 1397, 1731 |
| SaqAI | TTAA | 8 cut(s) | 260, 635, 735, 744, 875, 1038, 1143, 1227 |
| SatI | GCNGC | 8 cut(s) | 186, 429, 507, 916, 967, 977, 1487, 1719 |
| Sau3AI | GATC | 8 cut(s) | 67, 144, 298, 788, 1899, 1915, 2039, 2112 |
| Sau96I | GGNCC | 3 cut(s) | 62, 220, 1586 |
| SchI | GAGTC | 3 cut(s) | 636, 1300, 1572 |
| ScrFI | CCNGG | 6 cut(s) | 31, 224, 318, 834, 1503, 1731 |
| SduI | GDGCHC | 2 cut(s) | 850, 873 |
| SfaNI | GCATC | 7 cut(s) | 248, 549, 1036, 1735, 1834, 1848, 1944 |
| SfcI | CTRYAG | 2 cut(s) | 993, 1484 |
| SfuI | TTCGAA | 1 cut(s) | 464 |
| SinI | GGWCC | 1 cut(s) | 1586 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 611, 1397, 1731 |
| SmlI | CTYRAG | 4 cut(s) | 634, 980, 1181, 1677 |
| SmoI | CTYRAG | 4 cut(s) | 634, 980, 1181, 1677 |
| SpeI | ACTAGT | 1 cut(s) | 278 |
| SphI | GCATGC | 1 cut(s) | 98 |
| SsiI | CCGC | 4 cut(s) | 915, 1698, 1808, 1823 |
| SspI | AATATT | 1 cut(s) | 535 |
| SspMI | CTAG | 8 cut(s) | 279, 623, 704, 1050, 1415, 1490, 1923, 2118 |
| StyD4I | CCNGG | 6 cut(s) | 29, 222, 316, 832, 1501, 1729 |
| StyI | CCWWGG | 1 cut(s) | 941 |
| TaaI | ACNGT | 3 cut(s) | 235, 1108, 1816 |
| TaiI | ACGT | 2 cut(s) | 1399, 1446 |
| TaqI | TCGA | 5 cut(s) | 57, 464, 610, 823, 1707 |
| TauI | GCSGC | 1 cut(s) | 918 |
| TfiI | GAWTC | 4 cut(s) | 470, 720, 1088, 1418 |
| Tru1I | TTAA | 8 cut(s) | 260, 635, 735, 744, 875, 1038, 1143, 1227 |
| Tru9I | TTAA | 8 cut(s) | 260, 635, 735, 744, 875, 1038, 1143, 1227 |
| TscAI | CASTG | 3 cut(s) | 810, 1019, 1744 |
| TseFI | GTSAC | 3 cut(s) | 269, 801, 1409 |
| TseI | GCWGC | 7 cut(s) | 185, 428, 506, 966, 976, 1486, 1718 |
| Tsp45I | GTSAC | 3 cut(s) | 269, 801, 1409 |
| TspDTI | ATGAA | 5 cut(s) | 92, 580, 660, 674, 2047 |
| TspGWI | ACGGA | 1 cut(s) | 1321 |
| TspRI | CASTG | 3 cut(s) | 810, 1019, 1744 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1595 |
| Vha464I | CTTAAG | 1 cut(s) | 634 |
| VpaK11BI | GGWCC | 1 cut(s) | 1586 |
| XapI | RAATTY | 5 cut(s) | 34, 661, 924, 1253, 1274 |
| XceI | RCATGY | 3 cut(s) | 98, 1565, 2080 |
| XmnI | GAANNNNTTC | 1 cut(s) | 724 |
| XspI | CTAG | 8 cut(s) | 279, 623, 704, 1050, 1415, 1490, 1923, 2118 |