Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0007916

Physical Location & Seq

Genomic Coordinates Forward (+)

88498014 .. 88502785

Gene Structure 4772 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00067110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2193 bp

ATGGGCTTACCGGAAATCGTCGGTTTTGCTCGGAATTTCGCCGTCATGGTCAGAGTCAAAGGCCCCGACCCCAAAGGCCTCAAAATGCGAAACCATGCTTTCCACCAGTACAACTCTGGGACGACGACTATATCAGCTTCCGGAATGTTATTGCCGGAAACCCTTTACGACGGTGAGGTCGCGAAGCAGCTATGCGGCGGCGGAAATGACCGGTCACCGGCTCTGGTTGTGACTGTTGCTTCAGTTGTTGAGCCGTTTCTGTCTTTGCAACACAGAGAGAGCCTCGCCCAGGGCAGGCCTGAGTTGATTCCTGGGGTTGAGATTGATGTTATGGCAGAGGATGACATGTCGTTGGAGCAAGGCTCGGAGAAAGGACCTCCATGCTGGTTTGCAGCGCAGCTTTTAACCCTGATTGACGTTCCTGCATCTGCTATTGCACTCCAATCTCTTATTGATGCTTCTATAAGCTCTCCAGAGCATGGATGGGAGGTCGGTTGGTCTTTAGCCTCACATTATAATCCTCAGCCAGTTAGGGATGTTATTCAGACTCAGGTAAATTTGGCAGTTAGAGAATTGAGGAACGCAAGTCTTACGGGAAAATCAACTACAAGAATAGCAATTCTTGGAGTATCCTTGCTTTCTAAGGATGTGCCAAATATAACTATATCACCCTCCAATAAAAGGGGAGACTTTCTTGTAGCAGTGGGTTCTCCTTTTGGTATCCTCTCACCTGTGCACTTCTTTAACAGCATATCAGTGGGGTCCATTGCCAACTGCTATCCTCCTAATTCATCTTATAGTCCATTGCTGATGGCAGACATACGGTGTCTTCCTGGAGCGGAAGGTGGTCCAGTTTTGAGCGAGAATGCACAACTTATTGGTATGTTGATTAGACCATTGAGGCAGAAGACTAGCGGTGCTGAAGTTCAGCTGGTAATTTCGTGGGAAGCCATTGCAACTGCTTGCAGTGACTTGCTGCAGAAGGAGCCCCATTATGCAGAAAAGGGGATTTATTATGACAAAGGAAACTTAAATGCTGTAGGGAAAGCATTTTTAGCAAACACCAACGGCTCAAATGGACCCATAACGCATATTCAGGAGCATCTTTCTACTAGTTGCTCCCCATCAGCTGTTGAGAAGGCAATAACTTCTGTTTGTCTTATAACCATAGATGATGGAGTATGGGCATCTGGAGTTTTCCTCAACAAGCAAGGCCTAATACTCACAAATGCTCACCTCTTGGAACCATGGAGATTTGGTAAAAGGACTGCAAGTGACGGATCCATTTCTGAGGCTCCTCCCCTCCTATCCGACGGATCTCTATCTCCAGAGCAAAAGATTCAAGGCTTTCTGCCTGGGCTTCACAAGAATGGAGATCCCTCAGTTGGGAATGAACATGGAGCATTGAACTCATCTTACAAAGGCCGTAGAAATATACGTGTCCGCCTGGATCATATGGACCCTTGGGTTTGGTGTGACGCCAAAGTAGTCTATGTTTGTAAAGGACCTTTAGATGTTGCCTTGTTACAGCTCCAGTACATCCCAGGTCAGCTTTCCCCAGTTGTCATGGACTTTTCATCGCCATCTTTAGGATCAAAGGCATACGTTATTGGACATGGACTGTTTGGACCCAGATGTGGCTTTTCCCCATCAATTTGTTCTGGTGTGGTGGCAAAAGTTGTCAAAGCAAAGTTTCTACTCTCATATCAACCCAGTCAACCAGGAAATGCTCGAGGGCACTCTCCTGTGATGCTTGAAACAACAGCAGCTGTCCATCCAGGTGGTAGTGGTGGTGCTGTTGTAAATTCAGATGGTCATATGATTGGGCTTGTTACAAGCAACGCTAGACATGGTGGAGGAACAGTTATACCACATCTGAACTTCAGCATTCCATGTGCAGCTCTCCTGCCAATTTTCAAGTTCTCAGAAGACATGCAAGATCTTTCACATCTTCAGGTTCTCGACCAACCAAACAAACATCTTTCTTCTGTATGGGCGTTGATGCCGCATCTGTCTCCAAAGCCCCCTCCTTTGCCTCATATGCAACAGTCATTACCAAATGATCACAACAAAGAAGAGAAAGGTTCTCGCTTTGCAAAATTTTTAGCTGAAAGACGAGATGTGTTTTCAAAGCCAACGCAGCTTAACAGGGCTGGAAGACTATTGAACGACATTGTTCCTAGCAAGTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0010467 GO:0016485 GO:0016787 GO:0017171 GO:0019538 GO:0042579 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0051604 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Trypsin_2

Protein Analysis

730

Amino Acids

78.25

Weight (kDa)

7.34

Isoelectric Point (pI)

47.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Trypsin_2	PF13365	186 - 295	5.9e-09	Trypsin-like peptidase domain
Trypsin_2	PF13365	396 - 610	1.1e-17	Trypsin-like peptidase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007916)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28320
fragaria_vesca	FvH4_3g08860 FvH4_3g08860 FvH4_3g08860
malus_domestica	MD10G1291600.v1.1
prunus_persica	Prupe.4G050600_v2.0.a1 Prupe.4G050600_v2.0.a1 Prupe.4G050600_v2.0.a1
pyrus_communis	pycom10g24380
rosa_chinensis	RchiOBHm_Chr5g0008891 RchiOBHm_Chr5g0008901
rosa_laevigata	RLG00000022692 RLG00000031614
rosa_multiflora	Rmu_co8519179.1_g000001 Rmu_sc0004677.1_g000010
rosa_roxburghii	Rroxscaffold_1G00067110 Rroxscaffold_1G00067730
rosa_rugosa	Rorug04G0440000 Rorug04G0440000
rosa_samantha	Rh5AG068700 Rh5BG065400 Rh5CG076600 Rh5DG064400
rosa_wichuraiana	Rw5G006430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	516, 1163
AasI	GACNNNNNNGTC	1 cut(s)	176
AccB7I	CCANNNNNTGG	1 cut(s)	479
AccBSI	CCGCTC	1 cut(s)	839
AccII	CGCG	1 cut(s)	182
AccIII	TCCGGA	1 cut(s)	140
AciI	CCGC	7 cut(s)	195, 198, 201, 839, 915, 1444, 2006
AclWI	GGATC	6 cut(s)	1275, 1288, 1324, 1370, 1458, 1600
AcsI	RAATTY	4 cut(s)	34, 556, 1804, 2099
AcuI	CTGAAG	4 cut(s)	225, 942, 1867, 1937
AcyI	GRCGYC	1 cut(s)	1479
AfaI	GTAC	2 cut(s)	110, 1538
AfiI	CCNNNNNNNGG	9 cut(s)	217, 289, 294, 479, 681, 1385, 1386, 1589, 1637
AflIII	ACRYGT	2 cut(s)	345, 1438
AgeI	ACCGGT	1 cut(s)	210
AgsI	TTSAA	6 cut(s)	1343, 1408, 1757, 1918, 2130, 2167
AhlI	ACTAGT	1 cut(s)	1112
AjnI	CCWGG	8 cut(s)	288, 310, 832, 1354, 1446, 1543, 1720, 1777
Alw21I	GWGCWC	1 cut(s)	738
Alw26I	GTCTC	2 cut(s)	681, 2019
Alw44I	GTGCAC	1 cut(s)	734
AlwI	GGATC	6 cut(s)	1275, 1288, 1324, 1370, 1458, 1600
AlwNI	CAGNNNCTG	1 cut(s)	1769
Ama87I	CYCGRG	1 cut(s)	1731
Aor13HI	TCCGGA	1 cut(s)	140
AoxI	GGCC	5 cut(s)	61, 76, 296, 1213, 1423
ApaLI	GTGCAC	1 cut(s)	734
ApeKI	GCWGC	7 cut(s)	187, 392, 397, 976, 1766, 1898, 2140
ApoI	RAATTY	4 cut(s)	34, 556, 1804, 2099
AsiGI	ACCGGT	1 cut(s)	210
AspLEI	GCGC	1 cut(s)	397
AspS9I	GGNCC	8 cut(s)	62, 374, 762, 848, 1079, 1459, 1505, 1628
AsuHPI	GGTGA	5 cut(s)	185, 207, 660, 720, 1226
AvaI	CYCGRG	1 cut(s)	1731
AvaII	GGWCC	7 cut(s)	374, 762, 848, 1079, 1459, 1505, 1628
BaeGI	GKGCMC	2 cut(s)	738, 1740
BamHI	GGATCC	1 cut(s)	1280
BanII	GRGCYC	1 cut(s)	990
BbsI	GAAGAC	4 cut(s)	821, 914, 1935, 2164
Bbv12I	GWGCWC	1 cut(s)	738
BbvCI	CCTCAGC	1 cut(s)	522
BbvI	GCAGC	7 cut(s)	199, 404, 409, 963, 1778, 1910, 2152
BccI	CCATC	8 cut(s)	477, 805, 1132, 1169, 1591, 1657, 1782, 1805
BceAI	ACGGC	4 cut(s)	26, 238, 1084, 1410
BciT130I	CCWGG	8 cut(s)	290, 312, 834, 1356, 1448, 1545, 1722, 1779
BciVI	GTATCC	2 cut(s)	640, 731
BclI	TGATCA	1 cut(s)	2062
BcoDI	GTCTC	2 cut(s)	681, 2019
BcuI	ACTAGT	1 cut(s)	1112
BfaI	CTAG	4 cut(s)	912, 1113, 1845, 2181
BfmI	CTRYAG	2 cut(s)	977, 1038
BfuI	GTATCC	2 cut(s)	640, 731
BglII	AGATCT	1 cut(s)	1939
Bme1390I	CCNGG	8 cut(s)	290, 312, 834, 1356, 1448, 1545, 1722, 1779
Bme18I	GGWCC	7 cut(s)	374, 762, 848, 1079, 1459, 1505, 1628
BmeT110I	CYCGRG	1 cut(s)	1731
BmgT120I	GGNCC	8 cut(s)	62, 374, 762, 848, 1079, 1459, 1505, 1628
BmiI	GGNNCC	9 cut(s)	64, 763, 987, 1081, 1245, 1282, 1296, 1461, 1630
BmrFI	CCNGG	8 cut(s)	290, 312, 834, 1356, 1448, 1545, 1722, 1779
BmrI	ACTGGG	2 cut(s)	1553, 1707
BmsI	GCATC	7 cut(s)	434, 445, 1111, 1196, 1740, 1992, 2017
BmuI	ACTGGG	2 cut(s)	1553, 1707
BpiI	GAAGAC	4 cut(s)	821, 914, 1935, 2164
BplI	GAGNNNNNCTC	6 cut(s)	267, 299, 347, 379, 1185, 1217
BpmI	CTGGAG	5 cut(s)	456, 855, 1212, 1311, 1517
Bpu10I	CCTNAGC	1 cut(s)	522
BsaAI	YACGTR	1 cut(s)	1439
BsaBI	GATNNNNATC	1 cut(s)	1321
BsaHI	GRCGYC	1 cut(s)	1479
BsaJI	CCNNGG	7 cut(s)	288, 289, 311, 1247, 1355, 1463, 1543
BsaWI	WCCGGW	3 cut(s)	10, 140, 210
BsaXI	ACNNNNNCTCC	4 cut(s)	1243, 1273, 1848, 1878
Bsc4I	CCNNNNNNNGG	9 cut(s)	217, 289, 294, 479, 681, 1385, 1386, 1589, 1637
Bse118I	RCCGGY	2 cut(s)	210, 217
Bse1I	ACTGG	6 cut(s)	106, 527, 851, 1534, 1559, 1713
Bse3DI	GCAATG	3 cut(s)	765, 803, 951
Bse8I	GATNNNNATC	1 cut(s)	1321
BseAI	TCCGGA	1 cut(s)	140
BseBI	CCWGG	8 cut(s)	290, 312, 834, 1356, 1448, 1545, 1722, 1779
BseDI	CCNNGG	7 cut(s)	288, 289, 311, 1247, 1355, 1463, 1543
BseGI	GGATG	6 cut(s)	346, 488, 541, 652, 1539, 1774
BseJI	GATNNNNATC	1 cut(s)	1321
BseLI	CCNNNNNNNGG	9 cut(s)	217, 289, 294, 479, 681, 1385, 1386, 1589, 1637
BseMI	GCAATG	3 cut(s)	765, 803, 951
BseMII	CTCAG	6 cut(s)	291, 536, 563, 1281, 1395, 1938
BseNI	ACTGG	6 cut(s)	106, 527, 851, 1534, 1559, 1713
BseRI	GAGGAG	1 cut(s)	1287
BseSI	GKGCMC	2 cut(s)	738, 1740
BseXI	GCAGC	7 cut(s)	199, 404, 409, 963, 1778, 1910, 2152
BsgI	GTGCAG	1 cut(s)	1917
Bsh1236I	CGCG	1 cut(s)	182
BshFI	GGCC	5 cut(s)	63, 78, 298, 1215, 1425
BshTI	ACCGGT	1 cut(s)	210
BsiHKAI	GWGCWC	1 cut(s)	738
BsiHKCI	CYCGRG	1 cut(s)	1731
BsiSI	CCGG	5 cut(s)	11, 141, 155, 211, 218
BslFI	GGGAC	1 cut(s)	133
BslI	CCNNNNNNNGG	9 cut(s)	217, 289, 294, 479, 681, 1385, 1386, 1589, 1637
BsmAI	GTCTC	2 cut(s)	681, 2019
BsmFI	GGGAC	1 cut(s)	133
BsmI	GAATGC	2 cut(s)	871, 1887
BsnI	GGCC	5 cut(s)	63, 78, 298, 1215, 1425
BsoBI	CYCGRG	1 cut(s)	1731
Bsp1286I	GDGCHC	3 cut(s)	738, 990, 1740
Bsp13I	TCCGGA	1 cut(s)	140
Bsp143I	GATC	7 cut(s)	1280, 1316, 1375, 1450, 1592, 1939, 2062
Bsp19I	CCATGG	1 cut(s)	1247
Bsp68I	TCGCGA	1 cut(s)	182
BspACI	CCGC	7 cut(s)	195, 198, 201, 839, 915, 1444, 2006
BspANI	GGCC	5 cut(s)	63, 78, 298, 1215, 1425
BspCNI	CTCAG	6 cut(s)	292, 535, 562, 1282, 1394, 1937
BspEI	TCCGGA	1 cut(s)	140
BspFNI	CGCG	1 cut(s)	182
BspLI	GGNNCC	9 cut(s)	64, 763, 987, 1081, 1245, 1282, 1296, 1461, 1630
BspMAI	CTGCAG	1 cut(s)	981
BspPI	GGATC	6 cut(s)	1275, 1288, 1324, 1370, 1458, 1600
BsrBI	CCGCTC	1 cut(s)	839
BsrDI	GCAATG	3 cut(s)	765, 803, 951
BsrFI	RCCGGY	2 cut(s)	210, 217
BsrI	ACTGG	6 cut(s)	106, 527, 851, 1534, 1559, 1713
BssAI	RCCGGY	2 cut(s)	210, 217
BssECI	CCNNGG	7 cut(s)	288, 289, 311, 1247, 1355, 1463, 1543
BssMI	GATC	7 cut(s)	1280, 1316, 1375, 1450, 1592, 1939, 2062
BssNI	GRCGYC	1 cut(s)	1479
BssT1I	CCWWGG	2 cut(s)	1247, 1463
Bst2UI	CCWGG	8 cut(s)	290, 312, 834, 1356, 1448, 1545, 1722, 1779
Bst4CI	ACNGT	6 cut(s)	173, 235, 825, 1623, 1864, 2049
Bst6I	CTCTTC	1 cut(s)	2070
BstACI	GRCGYC	1 cut(s)	1479
BstBAI	YACGTR	1 cut(s)	1439
BstC8I	GCNNGC	2 cut(s)	296, 964
BstDEI	CTNAG	7 cut(s)	300, 522, 549, 642, 1290, 1381, 1924
BstDSI	CCRYGG	1 cut(s)	1247
BstEII	GGTNACC	1 cut(s)	213
BstENI	CCTNNNNNAGG	1 cut(s)	287
BstF5I	GGATG	6 cut(s)	346, 488, 541, 652, 1539, 1774
BstFNI	CGCG	1 cut(s)	182
BstHHI	GCGC	1 cut(s)	397
BstKTI	GATC	7 cut(s)	1283, 1319, 1378, 1453, 1595, 1942, 2065
BstMAI	GTCTC	2 cut(s)	681, 2019
BstMBI	GATC	7 cut(s)	1280, 1316, 1375, 1450, 1592, 1939, 2062
BstMWI	GCNNNNNNNGC	4 cut(s)	985, 1055, 2041, 2140
BstNI	CCWGG	8 cut(s)	290, 312, 834, 1356, 1448, 1545, 1722, 1779
BstNSI	RCATGY	2 cut(s)	349, 1936
BstPI	GGTNACC	1 cut(s)	213
BstSCI	CCNGG	8 cut(s)	288, 310, 832, 1354, 1446, 1543, 1720, 1777
BstSFI	CTRYAG	2 cut(s)	977, 1038
BstSLI	GKGCMC	2 cut(s)	738, 1740
BstUI	CGCG	1 cut(s)	182
BstV1I	GCAGC	7 cut(s)	199, 404, 409, 963, 1778, 1910, 2152
BstV2I	GAAGAC	4 cut(s)	821, 914, 1935, 2164
BstX2I	RGATCY	4 cut(s)	1280, 1316, 1375, 1939
BstXI	CCANNNNNNTGG	1 cut(s)	1781
BstYI	RGATCY	4 cut(s)	1280, 1316, 1375, 1939
BsuI	GTATCC	2 cut(s)	640, 731
BsuRI	GGCC	5 cut(s)	63, 78, 298, 1215, 1425
BtgI	CCRYGG	1 cut(s)	1247
BtgZI	GCGATG	1 cut(s)	1563
BtsCI	GGATG	6 cut(s)	346, 488, 541, 652, 1539, 1774
BtsI	GCAGTG	2 cut(s)	708, 973
BtsIMutI	CAGTG	3 cut(s)	708, 762, 973
BtuMI	TCGCGA	1 cut(s)	182
Cac8I	GCNNGC	2 cut(s)	296, 964
CaiI	CAGNNNCTG	1 cut(s)	1769
CfoI	GCGC	1 cut(s)	397
Cfr10I	RCCGGY	2 cut(s)	210, 217
Cfr13I	GGNCC	8 cut(s)	62, 374, 762, 848, 1079, 1459, 1505, 1628
CseI	GACGC	1 cut(s)	1487
Csp6I	GTAC	2 cut(s)	109, 1537
CspAI	ACCGGT	1 cut(s)	210
CviQI	GTAC	2 cut(s)	109, 1537
DdeI	CTNAG	7 cut(s)	300, 522, 549, 642, 1290, 1381, 1924
DpnI	GATC	7 cut(s)	1282, 1318, 1377, 1452, 1594, 1941, 2064
DpnII	GATC	7 cut(s)	1280, 1316, 1375, 1450, 1592, 1939, 2062
DrdI	GACNNNNNNGTC	1 cut(s)	176
DseDI	GACNNNNNNGTC	1 cut(s)	176
Eam1104I	CTCTTC	1 cut(s)	2070
EarI	CTCTTC	1 cut(s)	2070
EciI	GGCGGA	2 cut(s)	216, 1433
Eco130I	CCWWGG	2 cut(s)	1247, 1463
Eco147I	AGGCCT	3 cut(s)	78, 298, 1215
Eco24I	GRGCYC	1 cut(s)	990
Eco47I	GGWCC	7 cut(s)	374, 762, 848, 1079, 1459, 1505, 1628
Eco57I	CTGAAG	4 cut(s)	225, 942, 1867, 1937
Eco88I	CYCGRG	1 cut(s)	1731
Eco91I	GGTNACC	1 cut(s)	213
EcoNI	CCTNNNNNAGG	1 cut(s)	287
EcoO109I	RGGNCCY	3 cut(s)	62, 374, 1505
EcoO65I	GGTNACC	1 cut(s)	213
EcoRII	CCWGG	8 cut(s)	288, 310, 832, 1354, 1446, 1543, 1720, 1777
EcoT14I	CCWWGG	2 cut(s)	1247, 1463
EcoT38I	GRGCYC	1 cut(s)	990
ErhI	CCWWGG	2 cut(s)	1247, 1463
FaqI	GGGAC	1 cut(s)	133
FauNDI	CATATG	3 cut(s)	1455, 1818, 2040
FbaI	TGATCA	1 cut(s)	2062
FokI	GGATG	6 cut(s)	353, 495, 548, 659, 1526, 1761
FriOI	GRGCYC	1 cut(s)	990
FspBI	CTAG	4 cut(s)	912, 1113, 1845, 2181
GlaI	GCGC	1 cut(s)	396
GsuI	CTGGAG	5 cut(s)	456, 855, 1212, 1311, 1517
HaeIII	GGCC	5 cut(s)	63, 78, 298, 1215, 1425
HapII	CCGG	5 cut(s)	11, 141, 155, 211, 218
HgaI	GACGC	1 cut(s)	1487
HhaI	GCGC	1 cut(s)	397
Hin1I	GRCGYC	1 cut(s)	1479
Hin6I	GCGC	1 cut(s)	395
HinP1I	GCGC	1 cut(s)	395
HincII	GTYRAC	1 cut(s)	1718
HindII	GTYRAC	1 cut(s)	1718
HinfI	GANTC	4 cut(s)	54, 307, 547, 1339
HpaII	CCGG	5 cut(s)	11, 141, 155, 211, 218
HphI	GGTGA	5 cut(s)	185, 207, 660, 720, 1226
Hpy166II	GTNNAC	2 cut(s)	736, 1718
Hpy188I	TCNGA	9 cut(s)	33, 53, 367, 546, 1291, 1312, 1810, 1878, 1927
Hpy188III	TCNNGA	7 cut(s)	141, 181, 473, 1097, 1191, 1328, 1961
Hpy8I	GTNNAC	2 cut(s)	736, 1718
Hpy99I	CGWCG	4 cut(s)	23, 127, 173, 1316
HpyAV	CCTTC	3 cut(s)	836, 976, 1132
HpyCH4III	ACNGT	6 cut(s)	173, 235, 825, 1623, 1864, 2049
HpyCH4IV	ACGT	3 cut(s)	417, 1438, 1605
HpyF10VI	GCNNNNNNNGC	4 cut(s)	985, 1055, 2041, 2140
HpyF3I	CTNAG	7 cut(s)	300, 522, 549, 642, 1290, 1381, 1924
HpySE526I	ACGT	3 cut(s)	417, 1438, 1605
Hsp92I	GRCGYC	1 cut(s)	1479
HspAI	GCGC	1 cut(s)	395
Kpn2I	TCCGGA	1 cut(s)	140
Ksp22I	TGATCA	1 cut(s)	2062
Kzo9I	GATC	7 cut(s)	1280, 1316, 1375, 1450, 1592, 1939, 2062
LmnI	GCTCC	8 cut(s)	355, 836, 985, 1099, 1124, 1300, 1400, 1536
Lsp1109I	GCAGC	7 cut(s)	199, 404, 409, 963, 1778, 1910, 2152
LweI	GCATC	7 cut(s)	434, 445, 1111, 1196, 1740, 1992, 2017
MaeI	CTAG	4 cut(s)	912, 1113, 1845, 2181
MaeII	ACGT	3 cut(s)	417, 1438, 1605
MaeIII	GTNAC	7 cut(s)	213, 229, 968, 1274, 1475, 1524, 1831
MalI	GATC	7 cut(s)	1282, 1318, 1377, 1452, 1594, 1941, 2064
MbiI	CCGCTC	1 cut(s)	839
MboI	GATC	7 cut(s)	1280, 1316, 1375, 1450, 1592, 1939, 2062
MboII	GAAGA	7 cut(s)	821, 919, 1940, 1943, 1977, 2087, 2169
MflI	RGATCY	4 cut(s)	1280, 1316, 1375, 1939
MhlI	GDGCHC	3 cut(s)	738, 990, 1740
MlyI	GAGTC	2 cut(s)	63, 541
MmeI	TCCRAC	2 cut(s)	333, 1335
MroI	TCCGGA	1 cut(s)	140
MseI	TTAA	4 cut(s)	404, 744, 1031, 2145
MslI	CAYNNNNRTG	3 cut(s)	755, 1368, 1779
MspA1I	CMGCKG	3 cut(s)	931, 1130, 1769
MspI	CCGG	5 cut(s)	11, 141, 155, 211, 218
MspR9I	CCNGG	8 cut(s)	290, 312, 834, 1356, 1448, 1545, 1722, 1779
Mva1269I	GAATGC	2 cut(s)	871, 1887
MvaI	CCWGG	8 cut(s)	290, 312, 834, 1356, 1448, 1545, 1722, 1779
MvnI	CGCG	1 cut(s)	182
MwoI	GCNNNNNNNGC	4 cut(s)	985, 1055, 2041, 2140
NcoI	CCATGG	1 cut(s)	1247
NdeI	CATATG	3 cut(s)	1455, 1818, 2040
NdeII	GATC	7 cut(s)	1280, 1316, 1375, 1450, 1592, 1939, 2062
NlaIV	GGNNCC	9 cut(s)	64, 763, 987, 1081, 1245, 1282, 1296, 1461, 1630
NmuCI	GTSAC	5 cut(s)	213, 229, 968, 1274, 1475
NruI	TCGCGA	1 cut(s)	182
NspI	RCATGY	2 cut(s)	349, 1936
PaeR7I	CTCGAG	1 cut(s)	1731
PasI	CCCWGGG	1 cut(s)	289
PceI	AGGCCT	3 cut(s)	78, 298, 1215
PciI	ACATGT	1 cut(s)	345
PctI	GAATGC	2 cut(s)	871, 1887
PfeI	GAWTC	2 cut(s)	307, 1339
PflMI	CCANNNNNTGG	1 cut(s)	479
PfoI	TCCNGGA	1 cut(s)	832
PinAI	ACCGGT	1 cut(s)	210
PleI	GAGTC	2 cut(s)	62, 541
PpsI	GAGTC	2 cut(s)	62, 541
Ppu21I	YACGTR	1 cut(s)	1439
PpuMI	RGGWCCY	2 cut(s)	374, 1505
PscI	ACATGT	1 cut(s)	345
PsiI	TTATAA	2 cut(s)	516, 1163
Psp5II	RGGWCCY	2 cut(s)	374, 1505
Psp6I	CCWGG	8 cut(s)	288, 310, 832, 1354, 1446, 1543, 1720, 1777
PspEI	GGTNACC	1 cut(s)	213
PspGI	CCWGG	8 cut(s)	288, 310, 832, 1354, 1446, 1543, 1720, 1777
PspN4I	GGNNCC	9 cut(s)	64, 763, 987, 1081, 1245, 1282, 1296, 1461, 1630
PspPI	GGNCC	8 cut(s)	62, 374, 762, 848, 1079, 1459, 1505, 1628
PspPPI	RGGWCCY	2 cut(s)	374, 1505
PspXI	VCTCGAGB	1 cut(s)	1731
PsrI	GAACNNNNNNTAC	2 cut(s)	1400, 1432
PstI	CTGCAG	1 cut(s)	981
PstNI	CAGNNNCTG	1 cut(s)	1769
PsuI	RGATCY	4 cut(s)	1280, 1316, 1375, 1939
PvuII	CAGCTG	3 cut(s)	931, 1130, 1769
RruI	TCGCGA	1 cut(s)	182
RsaI	GTAC	2 cut(s)	110, 1538
RsaNI	GTAC	2 cut(s)	109, 1537
RseI	CAYNNNNRTG	3 cut(s)	755, 1368, 1779
SaqAI	TTAA	4 cut(s)	404, 744, 1031, 2145
Sau3AI	GATC	7 cut(s)	1280, 1316, 1375, 1450, 1592, 1939, 2062
Sau96I	GGNCC	8 cut(s)	62, 374, 762, 848, 1079, 1459, 1505, 1628
SchI	GAGTC	2 cut(s)	63, 541
ScrFI	CCNGG	8 cut(s)	290, 312, 834, 1356, 1448, 1545, 1722, 1779
SduI	GDGCHC	3 cut(s)	738, 990, 1740
SfaNI	GCATC	7 cut(s)	434, 445, 1111, 1196, 1740, 1992, 2017
SfcI	CTRYAG	2 cut(s)	977, 1038
Sfr274I	CTCGAG	1 cut(s)	1731
SinI	GGWCC	7 cut(s)	374, 762, 848, 1079, 1459, 1505, 1628
SlaI	CTCGAG	1 cut(s)	1731
SmiMI	CAYNNNNRTG	3 cut(s)	755, 1368, 1779
SmlI	CTYRAG	1 cut(s)	1731
SmoI	CTYRAG	1 cut(s)	1731
SpeI	ACTAGT	1 cut(s)	1112
SseBI	AGGCCT	3 cut(s)	78, 298, 1215
SsiI	CCGC	7 cut(s)	195, 198, 201, 839, 915, 1444, 2006
SspMI	CTAG	4 cut(s)	912, 1113, 1845, 2181
StuI	AGGCCT	3 cut(s)	78, 298, 1215
StyD4I	CCNGG	8 cut(s)	288, 310, 832, 1354, 1446, 1543, 1720, 1777
StyI	CCWWGG	2 cut(s)	1247, 1463
TaaI	ACNGT	6 cut(s)	173, 235, 825, 1623, 1864, 2049
TaiI	ACGT	3 cut(s)	420, 1441, 1608
TaqI	TCGA	2 cut(s)	1732, 1962
TatI	WGTACW	2 cut(s)	108, 1536
TauI	GCSGC	3 cut(s)	198, 201, 2008
TfiI	GAWTC	2 cut(s)	307, 1339
Tru1I	TTAA	4 cut(s)	404, 744, 1031, 2145
Tru9I	TTAA	4 cut(s)	404, 744, 1031, 2145
TscAI	CASTG	3 cut(s)	708, 762, 973
TseFI	GTSAC	5 cut(s)	213, 229, 968, 1274, 1475
TseI	GCWGC	7 cut(s)	187, 392, 397, 976, 1766, 1898, 2140
Tsp45I	GTSAC	5 cut(s)	213, 229, 968, 1274, 1475
TspDTI	ATGAA	3 cut(s)	780, 1407, 1566
TspGWI	ACGGA	2 cut(s)	1293, 1329
TspRI	CASTG	3 cut(s)	708, 762, 973
Van91I	CCANNNNNTGG	1 cut(s)	479
VneI	GTGCAC	1 cut(s)	734
VpaK11BI	GGWCC	7 cut(s)	374, 762, 848, 1079, 1459, 1505, 1628
XagI	CCTNNNNNAGG	1 cut(s)	287
XapI	RAATTY	4 cut(s)	34, 556, 1804, 2099
XceI	RCATGY	2 cut(s)	349, 1936
XcmI	CCANNNNNNNNNTGG	2 cut(s)	113, 480
XhoI	CTCGAG	1 cut(s)	1731
XspI	CTAG	4 cut(s)	912, 1113, 1845, 2181

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.