AT1G30440

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0014576
Physical Location & Seq
Forward (+)
10758743 .. 10762429
3687 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G30440.1

Sequence Viewer

Length: 1998 bp
ATGGCTTGCATGAAGCTGGGATCCAAATCTGATGCTTTCCAGAGACAAGGCCAGGCTTGGTTTTGCACAACTGGACTTCCTAGTGATATTGTCGTTGAAGTTGGGGAGATGTCTTTTCATCTCCACAAGTTTCCCTTGCTCTCTAGAAGTGGAGTCATGGAAAGAAGGATTGCAGAAGCATCAAAAGAAGGCGATGATAAATGTCTCATTGAAATCTCTGATCTTCCTGGTGGAGACAAAACGTTTGAACTAGTCGCTAAGTTCTGCTATGGTGTGAAGCTTGAACTCACTGCTTCTAACGTTGTATATCTCAGATGCGCTGCTGAGCATCTCGAAATGACTGAAGAACATGGGGAAGGAAATCTTATTTCTCAAACTGAAACATTTTTCAATCAAGTAGTCCTCAAAAGCTGGAAAGATTCAATAAAAGCGCTTCATAGCTGCGATGAGGTCCTCGAGTATGCTGATGAATTGAACATTACCAAGAAATGCATTGAGTCACTAGCCATGAGAGCATCGACAGACCCAAACTTGTTTGGATGGCCAGTTGTGGAGCATGGTGGGCCCATGCAGAGTCCAGGTGGCAGTGTTTTATGGAATGGGATAAGCACCGGGGCTAGACCTAAACATACTAGTTCAGACTGGTGGTACGAGGATGCATCGATGCTAAGTTTTCCCCTTTTTAAGAGACTTATCACGGTGATGGAGTCCCGCGGCATTAGAGAAGACATCATCGCTGGCTCCCTAACCTATTACACACGAAAACACTTGCCTGGCTTAAAAAGACGACGTGGTGGACCTGAATCTAGTGGTCGTTTCAGCACACCTTTGGGCTCAGGGAATGTACTGTCCGAGGAAGAGCAGAAGAACTTGCTTGAAGAGATCCAGGAGCTTCTTCGTATGCAAAAAGGTTTAGTTCCAACCAAGTTTTTCGTTGACATGCTTCGAATCGCCAAGATTTTAAAAGCAAGTCCGGATTGCATAGCCAATTTGGAGAAGAGGATAGGGATGCAGCTTGACCAGGCTGCGTTGGAAGATCTTGTAATGCCTAGCTTTTCTCATACTATGGAGACCCTATACGATGTTGACTCTGTGCAAAGGATCTTGGACCATTTTCTTGGGACAGATCAGATTATGCCTGGTGGGGTTGGCTCTCCTTGTTCTTCAGTAGATGACGGGAATTTAATCGGATCCCCACAGTCAATAACACCAATGACAGCGGTTGCAAAGCTGATTGATGGGTATCTTGCTGAAGTTGCTCCTGATGTCAATCTTAAGCTTCCAAAGTTCCAAGCTTTAGCTGCTTCTATTCCTGAATACGCCAGACTCTTAGATGACGGACTCTATCGTGCAATAGACATTTATCTAAAGCATCATCCATGGTTGGCGGAAACAGAAAGAGAGAATCTGTGCCGGTTGTTAGATTGTCAGAAACTCTCTTTAGAAGCTTGTACACATGCGGCGCAGAACGAGAGATTACCGCTAAGAATAATCGTCCAAGTGCTCTTCTTTGAGCAGCTACAGCTCAGAACCTCTGTAGCTGGATGCTTCCTGGTCTCAGACAACCTCGATGGCGGATCAAGACAGTTAAGAAGCGGAGGATATGTAGGAGGACCAAACGAAGGAGGCGGAGGAGGAGGAGGATGGGCAACCGCGGTAAGAGAGAATCAAGTCCTGAAAGTTGGAATGGACAGTATGAGAATGCGAGTTTGTGAGTTAGAGAAAGAATGTTCCAACATGAGACAAGAGATTGAGAAACTCGGTAAGACGACAAAAGGTGGTGGTTCTGCAAGCAATGGAGTCGGTAGCAAGACTTGGGAAAACGTTTCTAAGAAACTCGGGTTCGGTTTTAAGCTGAAGTCGCATCAAATGTGCAGTGCTCAGGAAGGTTCTGTGTCTAAGTCTAACAACGAGAATGTGAAGATAGAGAAGCTAAAGGATGTTAAAGAGCGTCGTGGGAAGCATAAGAAAGCTTCGAGCATTAGTTCTGAGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

665

Amino Acids

73.41

Weight (kDa)

6.36

Isoelectric Point (pI)

43.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB PF00651 26 - 115 3.8e-06 BTB/POZ domain
NPH3 PF03000 214 - 484 5.8e-91 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014576)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G30440
fragaria_vesca FvH4_3g09890 FvH4_3g09890
malus_domestica MD05G1275200.v1.1 MD10G1254600.v1.1
prunus_persica Prupe.4G088800_v2.0.a1
pyrus_communis pycom05g25650 pycom10g21020
rosa_chinensis RchiOBHm_Chr5g0015601
rosa_laevigata RLG00000023153 RLG00000032212
rosa_multiflora Rmu_sc0003230.1_g000001
rosa_roxburghii Rroxscaffold_1G00060870
rosa_rugosa Rorug05G0028800 Rorug05G0028800
rosa_samantha Rh5AG122100
rosa_wichuraiana Rw5G010530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 714, 1655
AccIII TCCGGA 1 cut(s) 973
AclI AACGTT 3 cut(s) 242, 300, 1824
AclWI GGATC 7 cut(s) 15, 28, 877, 1109, 1185, 1198, 1585
AcoI YGGCCR 1 cut(s) 542
AcsI RAATTY 1 cut(s) 1180
AcuI CTGAAG 4 cut(s) 363, 1149, 1272, 1877
AfaI GTAC 3 cut(s) 650, 846, 1453
AfeI AGCGCT 1 cut(s) 432
AfiI CCNNNNNNNGG 1 cut(s) 1622
AflII CTTAAG 1 cut(s) 1274
AgsI TTSAA 8 cut(s) 98, 212, 248, 284, 391, 423, 475, 878
AhlI ACTAGT 2 cut(s) 250, 632
AjiI CACGTC 1 cut(s) 791
AjnI CCWGG 8 cut(s) 51, 226, 577, 772, 885, 1020, 1138, 1551
Alw21I GWGCWC 2 cut(s) 1506, 1882
Alw26I GTCTC 7 cut(s) 37, 209, 228, 682, 1064, 1561, 1735
AlwI GGATC 7 cut(s) 15, 28, 877, 1109, 1185, 1198, 1585
Ama87I CYCGRG 2 cut(s) 455, 1838
Aor13HI TCCGGA 1 cut(s) 973
Aor51HI AGCGCT 1 cut(s) 432
AoxI GGCC 3 cut(s) 49, 542, 563
ApaI GGGCCC 1 cut(s) 567
ApeKI GCWGC 6 cut(s) 320, 441, 1012, 1025, 1301, 1516
ApoI RAATTY 1 cut(s) 1180
ArsI GACNNNNNNTTYG 2 cut(s) 227, 259
AspLEI GCGC 3 cut(s) 320, 433, 1465
AspS9I GGNCC 6 cut(s) 451, 563, 564, 797, 1108, 1613
AsuC2I CCSGG 1 cut(s) 613
AsuHPI GGTGA 1 cut(s) 712
AsuII TTCGAA 1 cut(s) 946
AvaI CYCGRG 2 cut(s) 455, 1838
AvaII GGWCC 4 cut(s) 451, 797, 1108, 1613
BaeGI GKGCMC 1 cut(s) 567
BalI TGGCCA 1 cut(s) 544
BamHI GGATCC 2 cut(s) 20, 1190
BanII GRGCYC 2 cut(s) 567, 836
BbsI GAAGAC 1 cut(s) 732
Bbv12I GWGCWC 2 cut(s) 1506, 1882
BbvI GCAGC 6 cut(s) 307, 428, 1012, 1024, 1288, 1528
BccI CCATC 5 cut(s) 534, 697, 1232, 1565, 1638
BcgI CGANNNNNNTGC 2 cut(s) 1783, 1817
BciT130I CCWGG 8 cut(s) 53, 228, 579, 774, 887, 1022, 1140, 1553
BcnI CCSGG 1 cut(s) 613
BcoDI GTCTC 7 cut(s) 37, 209, 228, 682, 1064, 1561, 1735
BcuI ACTAGT 2 cut(s) 250, 632
BfaI CTAG 8 cut(s) 81, 144, 251, 503, 618, 633, 807, 1050
BfmI CTRYAG 2 cut(s) 1520, 1536
BfoI RGCGCY 1 cut(s) 434
BfrI CTTAAG 1 cut(s) 1274
BglII AGATCT 1 cut(s) 1036
BisI GCNGC 8 cut(s) 321, 442, 715, 1013, 1026, 1302, 1461, 1517
BlpI GCTNAGC 1 cut(s) 324
BlsI GCNGC 8 cut(s) 322, 443, 716, 1014, 1027, 1303, 1462, 1518
Bme1390I CCNGG 9 cut(s) 53, 228, 579, 613, 774, 887, 1022, 1140, 1553
Bme18I GGWCC 4 cut(s) 451, 797, 1108, 1613
BmeT110I CYCGRG 2 cut(s) 455, 1838
BmgBI CACGTC 1 cut(s) 791
BmgT120I GGNCC 6 cut(s) 451, 563, 564, 797, 1108, 1613
BmiI GGNNCC 4 cut(s) 22, 565, 742, 1192
BmrFI CCNGG 9 cut(s) 53, 228, 579, 613, 774, 887, 1022, 1140, 1553
BpiI GAAGAC 1 cut(s) 732
Bpu10I CCTNAGC 2 cut(s) 835, 1881
Bpu1102I GCTNAGC 1 cut(s) 324
Bpu14I TTCGAA 1 cut(s) 946
BpuMI CCSGG 1 cut(s) 613
Bsa29I ATCGAT 1 cut(s) 662
BsaBI GATNNNNATC 3 cut(s) 25, 1242, 1269
BsaI GGTCTC 2 cut(s) 1064, 1561
BsaJI CCNNGG 5 cut(s) 612, 712, 852, 1379, 1653
BsaWI WCCGGW 1 cut(s) 973
BsaXI ACNNNNNCTCC 2 cut(s) 1590, 1620
Bsc4I CCNNNNNNNGG 1 cut(s) 1622
Bse118I RCCGGY 1 cut(s) 1413
Bse1I ACTGG 3 cut(s) 76, 545, 647
Bse3DI GCAATG 1 cut(s) 1801
Bse8I GATNNNNATC 3 cut(s) 25, 1242, 1269
BseAI TCCGGA 1 cut(s) 973
BseBI CCWGG 8 cut(s) 53, 228, 579, 774, 887, 1022, 1140, 1553
BseCI ATCGAT 1 cut(s) 662
BseDI CCNNGG 5 cut(s) 612, 712, 852, 1379, 1653
BseGI GGATG 7 cut(s) 545, 661, 1014, 1375, 1550, 1649, 1945
BseJI GATNNNNATC 3 cut(s) 25, 1242, 1269
BseLI CCNNNNNNNGG 1 cut(s) 1622
BseMI GCAATG 1 cut(s) 1801
BseMII CTCAG 7 cut(s) 315, 325, 849, 1540, 1572, 1895, 1980
BseNI ACTGG 3 cut(s) 76, 545, 647
BseRI GAGGAG 3 cut(s) 1647, 1650, 1653
BseSI GKGCMC 1 cut(s) 567
BseXI GCAGC 6 cut(s) 307, 428, 1012, 1024, 1288, 1528
BseYI CCCAGC 1 cut(s) 16
BsgI GTGCAG 1 cut(s) 1894
Bsh1236I CGCG 2 cut(s) 714, 1655
BshFI GGCC 3 cut(s) 51, 544, 565
BshVI ATCGAT 1 cut(s) 662
BsiHKAI GWGCWC 2 cut(s) 1506, 1882
BsiHKCI CYCGRG 2 cut(s) 455, 1838
BsiSI CCGG 3 cut(s) 612, 974, 1414
BslFI GGGAC 2 cut(s) 694, 1135
BslI CCNNNNNNNGG 1 cut(s) 1622
BsmAI GTCTC 7 cut(s) 37, 209, 228, 682, 1064, 1561, 1735
BsmFI GGGAC 2 cut(s) 694, 1135
BsmI GAATGC 1 cut(s) 1707
BsnI GGCC 3 cut(s) 51, 544, 565
Bso31I GGTCTC 2 cut(s) 1064, 1561
BsoBI CYCGRG 2 cut(s) 455, 1838
Bsp119I TTCGAA 1 cut(s) 946
Bsp120I GGGCCC 1 cut(s) 563
Bsp1286I GDGCHC 4 cut(s) 567, 836, 1506, 1882
Bsp13I TCCGGA 1 cut(s) 973
Bsp1407I TGTACA 1 cut(s) 1451
Bsp143I GATC 8 cut(s) 20, 220, 882, 1036, 1101, 1126, 1190, 1577
Bsp1720I GCTNAGC 1 cut(s) 324
Bsp19I CCATGG 1 cut(s) 1379
BspANI GGCC 3 cut(s) 51, 544, 565
BspCNI CTCAG 7 cut(s) 316, 324, 848, 1539, 1571, 1894, 1981
BspDI ATCGAT 1 cut(s) 662
BspEI TCCGGA 1 cut(s) 973
BspFNI CGCG 2 cut(s) 714, 1655
BspLI GGNNCC 4 cut(s) 22, 565, 742, 1192
BspPI GGATC 7 cut(s) 15, 28, 877, 1109, 1185, 1198, 1585
BspQI GCTCTTC 2 cut(s) 852, 1511
BspT104I TTCGAA 1 cut(s) 946
BspTI CTTAAG 1 cut(s) 1274
BspTNI GGTCTC 2 cut(s) 1064, 1561
BsrDI GCAATG 1 cut(s) 1801
BsrFI RCCGGY 1 cut(s) 1413
BsrGI TGTACA 1 cut(s) 1451
BsrI ACTGG 3 cut(s) 76, 545, 647
BssAI RCCGGY 1 cut(s) 1413
BssECI CCNNGG 5 cut(s) 612, 712, 852, 1379, 1653
BssMI GATC 8 cut(s) 20, 220, 882, 1036, 1101, 1126, 1190, 1577
BssT1I CCWWGG 1 cut(s) 1379
Bst2UI CCWGG 8 cut(s) 53, 228, 579, 774, 887, 1022, 1140, 1553
Bst4CI ACNGT 5 cut(s) 700, 849, 1200, 1587, 1694
Bst6I CTCTTC 4 cut(s) 852, 873, 992, 1511
BstAFI CTTAAG 1 cut(s) 1274
BstAUI TGTACA 1 cut(s) 1451
BstBI TTCGAA 1 cut(s) 946
BstC8I GCNNGC 3 cut(s) 7, 739, 1792
BstDSI CCRYGG 3 cut(s) 712, 1379, 1653
BstF5I GGATG 7 cut(s) 545, 661, 1014, 1375, 1550, 1649, 1945
BstFNI CGCG 2 cut(s) 714, 1655
BstH2I RGCGCY 1 cut(s) 434
BstHHI GCGC 3 cut(s) 320, 433, 1465
BstKTI GATC 8 cut(s) 23, 223, 885, 1039, 1104, 1129, 1193, 1580
BstMAI GTCTC 7 cut(s) 37, 209, 228, 682, 1064, 1561, 1735
BstMBI GATC 8 cut(s) 20, 220, 882, 1036, 1101, 1126, 1190, 1577
BstMWI GCNNNNNNNGC 6 cut(s) 512, 562, 1256, 1301, 1522, 1861
BstNI CCWGG 8 cut(s) 53, 228, 579, 774, 887, 1022, 1140, 1553
BstNSI RCATGY 2 cut(s) 943, 1460
BstSCI CCNGG 9 cut(s) 51, 226, 577, 611, 772, 885, 1020, 1138, 1551
BstSFI CTRYAG 2 cut(s) 1520, 1536
BstSLI GKGCMC 1 cut(s) 567
BstUI CGCG 2 cut(s) 714, 1655
BstV1I GCAGC 6 cut(s) 307, 428, 1012, 1024, 1288, 1528
BstV2I GAAGAC 1 cut(s) 732
BstX2I RGATCY 5 cut(s) 20, 882, 1036, 1101, 1190
BstXI CCANNNNNNTGG 1 cut(s) 1118
BstYI RGATCY 5 cut(s) 20, 882, 1036, 1101, 1190
Bsu15I ATCGAT 1 cut(s) 662
BsuRI GGCC 3 cut(s) 51, 544, 565
BsuTUI ATCGAT 1 cut(s) 662
BtgI CCRYGG 3 cut(s) 712, 1379, 1653
BtgZI GCGATG 3 cut(s) 207, 459, 718
BtrI CACGTC 1 cut(s) 791
BtsCI GGATG 7 cut(s) 545, 661, 1014, 1375, 1550, 1649, 1945
BtsI GCAGTG 3 cut(s) 288, 592, 1882
BtsIMutI CAGTG 3 cut(s) 288, 592, 1882
Cac8I GCNNGC 3 cut(s) 7, 739, 1792
CfoI GCGC 3 cut(s) 320, 433, 1465
Cfr10I RCCGGY 1 cut(s) 1413
Cfr13I GGNCC 6 cut(s) 451, 563, 564, 797, 1108, 1613
Cfr42I CCGCGG 2 cut(s) 715, 1656
ClaI ATCGAT 1 cut(s) 662
CseI GACGC 1 cut(s) 1940
Csp6I GTAC 3 cut(s) 649, 845, 1452
CviQI GTAC 3 cut(s) 649, 845, 1452
DpnI GATC 8 cut(s) 22, 222, 884, 1038, 1103, 1128, 1192, 1579
DpnII GATC 8 cut(s) 20, 220, 882, 1036, 1101, 1126, 1190, 1577
DraI TTTAAA 1 cut(s) 963
EaeI YGGCCR 1 cut(s) 542
Eam1104I CTCTTC 4 cut(s) 852, 873, 992, 1511
EarI CTCTTC 4 cut(s) 852, 873, 992, 1511
EciI GGCGGA 3 cut(s) 1403, 1590, 1644
Eco130I CCWWGG 1 cut(s) 1379
Eco24I GRGCYC 2 cut(s) 567, 836
Eco31I GGTCTC 2 cut(s) 1064, 1561
Eco47I GGWCC 4 cut(s) 451, 797, 1108, 1613
Eco47III AGCGCT 1 cut(s) 432
Eco57I CTGAAG 4 cut(s) 363, 1149, 1272, 1877
Eco88I CYCGRG 2 cut(s) 455, 1838
EcoO109I RGGNCCY 1 cut(s) 451
EcoRII CCWGG 8 cut(s) 51, 226, 577, 772, 885, 1020, 1138, 1551
EcoT14I CCWWGG 1 cut(s) 1379
EcoT22I ATGCAT 2 cut(s) 494, 661
EcoT38I GRGCYC 2 cut(s) 567, 836
ErhI CCWWGG 1 cut(s) 1379
FalI AAGNNNNNCTT 4 cut(s) 119, 151, 348, 380
FaqI GGGAC 2 cut(s) 694, 1135
FauI CCCGC 1 cut(s) 719
Fnu4HI GCNGC 8 cut(s) 321, 442, 715, 1013, 1026, 1302, 1461, 1517
FokI GGATG 7 cut(s) 552, 668, 1021, 1362, 1557, 1656, 1952
FriOI GRGCYC 2 cut(s) 567, 836
Fsp4HI GCNGC 8 cut(s) 321, 442, 715, 1013, 1026, 1302, 1461, 1517
FspBI CTAG 8 cut(s) 81, 144, 251, 503, 618, 633, 807, 1050
GlaI GCGC 3 cut(s) 319, 432, 1464
GluI GCNGC 8 cut(s) 321, 442, 715, 1013, 1026, 1302, 1461, 1517
GsaI CCCAGC 1 cut(s) 20
HaeII RGCGCY 1 cut(s) 434
HaeIII GGCC 3 cut(s) 51, 544, 565
HapII CCGG 3 cut(s) 612, 974, 1414
HgaI GACGC 1 cut(s) 1940
HhaI GCGC 3 cut(s) 320, 433, 1465
Hin6I GCGC 3 cut(s) 318, 431, 1463
HinP1I GCGC 3 cut(s) 318, 431, 1463
HincII GTYRAC 2 cut(s) 937, 1087
HindII GTYRAC 2 cut(s) 937, 1087
HindIII AAGCTT 5 cut(s) 278, 1277, 1293, 1446, 1971
HpaII CCGG 3 cut(s) 612, 974, 1414
HphI GGTGA 1 cut(s) 712
Hpy166II GTNNAC 4 cut(s) 797, 937, 1087, 1454
Hpy188III TCNNGA 9 cut(s) 40, 144, 332, 974, 1262, 1313, 1581, 1675, 1883
Hpy8I GTNNAC 4 cut(s) 797, 937, 1087, 1454
Hpy99I CGWCG 2 cut(s) 792, 1956
HpyAV CCTTC 5 cut(s) 159, 182, 350, 1616, 1880
HpyCH4III ACNGT 5 cut(s) 700, 849, 1200, 1587, 1694
HpyCH4IV ACGT 4 cut(s) 242, 300, 790, 1824
HpyF10VI GCNNNNNNNGC 6 cut(s) 512, 562, 1256, 1301, 1522, 1861
HpySE526I ACGT 4 cut(s) 242, 300, 790, 1824
HspAI GCGC 3 cut(s) 318, 431, 1463
Kpn2I TCCGGA 1 cut(s) 973
KspI CCGCGG 2 cut(s) 715, 1656
Kzo9I GATC 8 cut(s) 20, 220, 882, 1036, 1101, 1126, 1190, 1577
LguI GCTCTTC 2 cut(s) 852, 1511
LmnI GCTCC 4 cut(s) 553, 746, 889, 1264
Lsp1109I GCAGC 6 cut(s) 307, 428, 1012, 1024, 1288, 1528
MaeI CTAG 8 cut(s) 81, 144, 251, 503, 618, 633, 807, 1050
MaeII ACGT 4 cut(s) 242, 300, 790, 1824
MaeIII GTNAC 1 cut(s) 498
MalI GATC 8 cut(s) 22, 222, 884, 1038, 1103, 1128, 1192, 1579
MboI GATC 8 cut(s) 20, 220, 882, 1036, 1101, 1126, 1190, 1577
MflI RGATCY 5 cut(s) 20, 882, 1036, 1101, 1190
MhlI GDGCHC 4 cut(s) 567, 836, 1506, 1882
MlsI TGGCCA 1 cut(s) 544
MluCI AATT 3 cut(s) 470, 988, 1180
MluNI TGGCCA 1 cut(s) 544
MlyI GAGTC 8 cut(s) 162, 506, 583, 716, 1082, 1320, 1335, 1809
MmeI TCCRAC 4 cut(s) 944, 1011, 1663, 1758
Mox20I TGGCCA 1 cut(s) 544
Mph1103I ATGCAT 2 cut(s) 494, 661
MroI TCCGGA 1 cut(s) 973
MscI TGGCCA 1 cut(s) 544
MseI TTAA 8 cut(s) 684, 779, 962, 1184, 1275, 1589, 1851, 1944
MslI CAYNNNNRTG 1 cut(s) 701
Msp20I TGGCCA 1 cut(s) 544
MspA1I CMGCKG 3 cut(s) 714, 1220, 1655
MspCI CTTAAG 1 cut(s) 1274
MspI CCGG 3 cut(s) 612, 974, 1414
MspR9I CCNGG 9 cut(s) 53, 228, 579, 613, 774, 887, 1022, 1140, 1553
Mva1269I GAATGC 1 cut(s) 1707
MvaI CCWGG 8 cut(s) 53, 228, 579, 774, 887, 1022, 1140, 1553
MvnI CGCG 2 cut(s) 714, 1655
MwoI GCNNNNNNNGC 6 cut(s) 512, 562, 1256, 1301, 1522, 1861
NciI CCSGG 1 cut(s) 613
NcoI CCATGG 1 cut(s) 1379
NdeII GATC 8 cut(s) 20, 220, 882, 1036, 1101, 1126, 1190, 1577
NlaIV GGNNCC 4 cut(s) 22, 565, 742, 1192
NmuCI GTSAC 1 cut(s) 498
NsiI ATGCAT 2 cut(s) 494, 661
NspI RCATGY 2 cut(s) 943, 1460
NspV TTCGAA 1 cut(s) 946
PaeR7I CTCGAG 1 cut(s) 455
PciSI GCTCTTC 2 cut(s) 852, 1511
PctI GAATGC 1 cut(s) 1707
PfeI GAWTC 5 cut(s) 419, 803, 948, 1405, 1666
PfoI TCCNGGA 1 cut(s) 885
PkrI GCNGC 8 cut(s) 322, 443, 716, 1014, 1027, 1303, 1462, 1518
PleI GAGTC 8 cut(s) 161, 505, 582, 715, 1082, 1320, 1335, 1808
PpsI GAGTC 8 cut(s) 161, 505, 582, 715, 1082, 1320, 1335, 1808
PpuMI RGGWCCY 1 cut(s) 451
Psp1406I AACGTT 3 cut(s) 242, 300, 1824
Psp5II RGGWCCY 1 cut(s) 451
Psp6I CCWGG 8 cut(s) 51, 226, 577, 772, 885, 1020, 1138, 1551
PspFI CCCAGC 1 cut(s) 16
PspGI CCWGG 8 cut(s) 51, 226, 577, 772, 885, 1020, 1138, 1551
PspN4I GGNNCC 4 cut(s) 22, 565, 742, 1192
PspOMI GGGCCC 1 cut(s) 563
PspPI GGNCC 6 cut(s) 451, 563, 564, 797, 1108, 1613
PspPPI RGGWCCY 1 cut(s) 451
PspXI VCTCGAGB 1 cut(s) 455
PsuI RGATCY 5 cut(s) 20, 882, 1036, 1101, 1190
RsaI GTAC 3 cut(s) 650, 846, 1453
RsaNI GTAC 3 cut(s) 649, 845, 1452
RseI CAYNNNNRTG 1 cut(s) 701
SacII CCGCGG 2 cut(s) 715, 1656
SapI GCTCTTC 2 cut(s) 852, 1511
SaqAI TTAA 8 cut(s) 684, 779, 962, 1184, 1275, 1589, 1851, 1944
SatI GCNGC 8 cut(s) 321, 442, 715, 1013, 1026, 1302, 1461, 1517
Sau3AI GATC 8 cut(s) 20, 220, 882, 1036, 1101, 1126, 1190, 1577
Sau96I GGNCC 6 cut(s) 451, 563, 564, 797, 1108, 1613
SchI GAGTC 8 cut(s) 162, 506, 583, 716, 1082, 1320, 1335, 1809
ScrFI CCNGG 9 cut(s) 53, 228, 579, 613, 774, 887, 1022, 1140, 1553
SduI GDGCHC 4 cut(s) 567, 836, 1506, 1882
SfcI CTRYAG 2 cut(s) 1520, 1536
Sfr274I CTCGAG 1 cut(s) 455
Sfr303I CCGCGG 2 cut(s) 715, 1656
SfuI TTCGAA 1 cut(s) 946
SgrBI CCGCGG 2 cut(s) 715, 1656
SinI GGWCC 4 cut(s) 451, 797, 1108, 1613
SlaI CTCGAG 1 cut(s) 455
SmiMI CAYNNNNRTG 1 cut(s) 701
SmlI CTYRAG 2 cut(s) 455, 1274
SmoI CTYRAG 2 cut(s) 455, 1274
SpeI ACTAGT 2 cut(s) 250, 632
Sse9I AATT 3 cut(s) 470, 988, 1180
SspMI CTAG 8 cut(s) 81, 144, 251, 503, 618, 633, 807, 1050
StyD4I CCNGG 9 cut(s) 51, 226, 577, 611, 772, 885, 1020, 1138, 1551
StyI CCWWGG 1 cut(s) 1379
TaaI ACNGT 5 cut(s) 700, 849, 1200, 1587, 1694
TaiI ACGT 4 cut(s) 245, 303, 793, 1827
TaqI TCGA 7 cut(s) 333, 456, 518, 662, 946, 1569, 1976
TasI AATT 3 cut(s) 470, 988, 1180
TatI WGTACW 2 cut(s) 844, 1451
TauI GCSGC 2 cut(s) 717, 1463
TfiI GAWTC 5 cut(s) 419, 803, 948, 1405, 1666
Tru1I TTAA 8 cut(s) 684, 779, 962, 1184, 1275, 1589, 1851, 1944
Tru9I TTAA 8 cut(s) 684, 779, 962, 1184, 1275, 1589, 1851, 1944
TscAI CASTG 3 cut(s) 295, 592, 1882
TseFI GTSAC 1 cut(s) 498
TseI GCWGC 6 cut(s) 320, 441, 1012, 1025, 1301, 1516
Tsp45I GTSAC 1 cut(s) 498
TspDTI ATGAA 4 cut(s) 26, 107, 425, 483
TspGWI ACGGA 1 cut(s) 1353
TspRI CASTG 3 cut(s) 295, 592, 1882
Vha464I CTTAAG 1 cut(s) 1274
VpaK11BI GGWCC 4 cut(s) 451, 797, 1108, 1613
XapI RAATTY 1 cut(s) 1180
XbaI TCTAGA 1 cut(s) 143
XceI RCATGY 2 cut(s) 943, 1460
XhoI CTCGAG 1 cut(s) 455
XspI CTAG 8 cut(s) 81, 144, 251, 503, 618, 633, 807, 1050
Zsp2I ATGCAT 2 cut(s) 494, 661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.