Belongs to the NPH3 family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G30440 |
| fragaria_vesca | FvH4_3g09890 FvH4_3g09890 |
| malus_domestica | MD05G1275200.v1.1 MD10G1254600.v1.1 |
| prunus_persica | Prupe.4G088800_v2.0.a1 |
| pyrus_communis | pycom05g25650 pycom10g21020 |
| rosa_chinensis | RchiOBHm_Chr5g0015601 |
| rosa_laevigata | RLG00000023153 RLG00000032212 |
| rosa_multiflora | Rmu_sc0003230.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00060870 |
| rosa_rugosa | Rorug05G0028800 Rorug05G0028800 |
| rosa_samantha | Rh5AG122100 |
| rosa_wichuraiana | Rw5G010530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1124 |
| Acc36I | ACCTGC | 2 cut(s) | 1124, 1353 |
| AccI | GTMKAC | 3 cut(s) | 306, 662, 937 |
| AciI | CCGC | 3 cut(s) | 464, 582, 1235 |
| AclWI | GGATC | 5 cut(s) | 28, 518, 891, 1531, 1795 |
| AcoI | YGGCCR | 1 cut(s) | 1165 |
| AcsI | RAATTY | 3 cut(s) | 923, 985, 1255 |
| AcuI | CTGAAG | 4 cut(s) | 204, 363, 446, 870 |
| AcyI | GRCGYC | 1 cut(s) | 787 |
| AfaI | GTAC | 3 cut(s) | 610, 811, 1092 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 463, 1120, 1596 |
| AflIII | ACRYGT | 1 cut(s) | 440 |
| AhlI | ACTAGT | 1 cut(s) | 797 |
| AjnI | CCWGG | 5 cut(s) | 56, 226, 577, 772, 1147 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1373, 1405 |
| Alw21I | GWGCWC | 2 cut(s) | 330, 1780 |
| Alw26I | GTCTC | 3 cut(s) | 1061, 1331, 1672 |
| AlwI | GGATC | 5 cut(s) | 28, 518, 891, 1531, 1795 |
| Ama87I | CYCGRG | 1 cut(s) | 1558 |
| AoxI | GGCC | 3 cut(s) | 54, 542, 1165 |
| ApeKI | GCWGC | 7 cut(s) | 320, 1009, 1286, 1289, 1409, 1465, 1494 |
| ApoI | RAATTY | 3 cut(s) | 923, 985, 1255 |
| AspS9I | GGNCC | 2 cut(s) | 563, 913 |
| AsuHPI | GGTGA | 3 cut(s) | 286, 361, 1173 |
| AsuII | TTCGAA | 2 cut(s) | 246, 406 |
| AvaI | CYCGRG | 1 cut(s) | 1558 |
| AvaII | GGWCC | 2 cut(s) | 563, 913 |
| BalI | TGGCCA | 1 cut(s) | 1167 |
| BanII | GRGCYC | 1 cut(s) | 839 |
| BauI | CACGAG | 1 cut(s) | 711 |
| BbsI | GAAGAC | 2 cut(s) | 192, 861 |
| Bbv12I | GWGCWC | 2 cut(s) | 330, 1780 |
| BbvI | GCAGC | 7 cut(s) | 307, 1021, 1273, 1276, 1396, 1477, 1481 |
| BccI | CCATC | 8 cut(s) | 126, 853, 979, 1157, 1316, 1363, 1514, 1618 |
| BceAI | ACGGC | 1 cut(s) | 1103 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1786, 1820 |
| BciT130I | CCWGG | 5 cut(s) | 58, 228, 579, 774, 1149 |
| BciVI | GTATCC | 1 cut(s) | 1657 |
| BclI | TGATCA | 1 cut(s) | 1015 |
| BcoDI | GTCTC | 3 cut(s) | 1061, 1331, 1672 |
| BcuI | ACTAGT | 1 cut(s) | 797 |
| BfaI | CTAG | 4 cut(s) | 503, 798, 807, 1716 |
| BfmI | CTRYAG | 2 cut(s) | 1338, 1360 |
| BfuAI | ACCTGC | 2 cut(s) | 1124, 1353 |
| BfuI | GTATCC | 1 cut(s) | 1657 |
| BglII | AGATCT | 1 cut(s) | 1033 |
| BisI | GCNGC | 7 cut(s) | 321, 1010, 1287, 1290, 1410, 1466, 1495 |
| BlpI | GCTNAGC | 1 cut(s) | 324 |
| BlsI | GCNGC | 7 cut(s) | 322, 1011, 1288, 1291, 1411, 1467, 1496 |
| Bme1390I | CCNGG | 5 cut(s) | 58, 228, 579, 774, 1149 |
| Bme18I | GGWCC | 2 cut(s) | 563, 913 |
| BmeT110I | CYCGRG | 1 cut(s) | 1558 |
| BmgT120I | GGNCC | 2 cut(s) | 563, 913 |
| BmiI | GGNNCC | 2 cut(s) | 838, 915 |
| BmrFI | CCNGG | 5 cut(s) | 58, 228, 579, 774, 1149 |
| BmrI | ACTGGG | 1 cut(s) | 81 |
| BmuI | ACTGGG | 1 cut(s) | 81 |
| BpiI | GAAGAC | 2 cut(s) | 192, 861 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1779 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 324 |
| Bpu14I | TTCGAA | 2 cut(s) | 246, 406 |
| BpuEI | CTTGAG | 2 cut(s) | 127, 1676 |
| BsaBI | GATNNNNATC | 1 cut(s) | 528 |
| BsaHI | GRCGYC | 1 cut(s) | 787 |
| BsaI | GGTCTC | 1 cut(s) | 1331 |
| BsaJI | CCNNGG | 4 cut(s) | 773, 1062, 1119, 1389 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 463, 1120, 1596 |
| Bse1I | ACTGG | 2 cut(s) | 76, 1196 |
| Bse3DI | GCAATG | 1 cut(s) | 896 |
| Bse8I | GATNNNNATC | 1 cut(s) | 528 |
| BseBI | CCWGG | 5 cut(s) | 58, 228, 579, 774, 1149 |
| BseDI | CCNNGG | 4 cut(s) | 773, 1062, 1119, 1389 |
| BseGI | GGATG | 5 cut(s) | 661, 971, 1168, 1324, 1629 |
| BseJI | GATNNNNATC | 1 cut(s) | 528 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 463, 1120, 1596 |
| BseMI | GCAATG | 1 cut(s) | 896 |
| BseMII | CTCAG | 2 cut(s) | 315, 1793 |
| BseNI | ACTGG | 2 cut(s) | 76, 1196 |
| BseRI | GAGGAG | 1 cut(s) | 1590 |
| BseXI | GCAGC | 7 cut(s) | 307, 1021, 1273, 1276, 1396, 1477, 1481 |
| BsgI | GTGCAG | 1 cut(s) | 1792 |
| BshFI | GGCC | 3 cut(s) | 56, 544, 1167 |
| BsiHKAI | GWGCWC | 2 cut(s) | 330, 1780 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1558 |
| BslFI | GGGAC | 2 cut(s) | 899, 1747 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 463, 1120, 1596 |
| BsmAI | GTCTC | 3 cut(s) | 1061, 1331, 1672 |
| BsmFI | GGGAC | 2 cut(s) | 899, 1747 |
| BsmI | GAATGC | 1 cut(s) | 1644 |
| BsnI | GGCC | 3 cut(s) | 56, 544, 1167 |
| Bso31I | GGTCTC | 1 cut(s) | 1331 |
| BsoBI | CYCGRG | 1 cut(s) | 1558 |
| Bsp119I | TTCGAA | 2 cut(s) | 246, 406 |
| Bsp1286I | GDGCHC | 3 cut(s) | 330, 839, 1780 |
| Bsp1407I | TGTACA | 1 cut(s) | 1090 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 324 |
| Bsp19I | CCATGG | 1 cut(s) | 1062 |
| BspACI | CCGC | 3 cut(s) | 464, 582, 1235 |
| BspANI | GGCC | 3 cut(s) | 56, 544, 1167 |
| BspCNI | CTCAG | 2 cut(s) | 316, 1792 |
| BspLI | GGNNCC | 2 cut(s) | 838, 915 |
| BspMAI | CTGCAG | 1 cut(s) | 1364 |
| BspMI | ACCTGC | 2 cut(s) | 1124, 1353 |
| BspPI | GGATC | 5 cut(s) | 28, 518, 891, 1531, 1795 |
| BspT104I | TTCGAA | 2 cut(s) | 246, 406 |
| BspTNI | GGTCTC | 1 cut(s) | 1331 |
| BsrDI | GCAATG | 1 cut(s) | 896 |
| BsrGI | TGTACA | 1 cut(s) | 1090 |
| BsrI | ACTGG | 2 cut(s) | 76, 1196 |
| BssECI | CCNNGG | 4 cut(s) | 773, 1062, 1119, 1389 |
| BssNAI | GTATAC | 1 cut(s) | 307 |
| BssNI | GRCGYC | 1 cut(s) | 787 |
| BssSI | CACGAG | 1 cut(s) | 711 |
| BssT1I | CCWWGG | 2 cut(s) | 1062, 1389 |
| Bst1107I | GTATAC | 1 cut(s) | 307 |
| Bst2BI | CACGAG | 1 cut(s) | 711 |
| Bst2UI | CCWGG | 5 cut(s) | 58, 228, 579, 774, 1149 |
| Bst4CI | ACNGT | 2 cut(s) | 1226, 1594 |
| Bst6I | CTCTTC | 1 cut(s) | 339 |
| BstACI | GRCGYC | 1 cut(s) | 787 |
| BstAUI | TGTACA | 1 cut(s) | 1090 |
| BstBI | TTCGAA | 2 cut(s) | 246, 406 |
| BstC8I | GCNNGC | 5 cut(s) | 7, 202, 1169, 1399, 1492 |
| BstDEI | CTNAG | 3 cut(s) | 324, 779, 1779 |
| BstDSI | CCRYGG | 2 cut(s) | 1062, 1119 |
| BstEII | GGTNACC | 2 cut(s) | 1179, 1226 |
| BstF5I | GGATG | 5 cut(s) | 661, 971, 1168, 1324, 1629 |
| BstMAI | GTCTC | 3 cut(s) | 1061, 1331, 1672 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 512, 784, 1139, 1241, 1286, 1849 |
| BstNI | CCWGG | 5 cut(s) | 58, 228, 579, 774, 1149 |
| BstNSI | RCATGY | 2 cut(s) | 204, 444 |
| BstPI | GGTNACC | 2 cut(s) | 1179, 1226 |
| BstSCI | CCNGG | 5 cut(s) | 56, 226, 577, 772, 1147 |
| BstSFI | CTRYAG | 2 cut(s) | 1338, 1360 |
| BstV1I | GCAGC | 7 cut(s) | 307, 1021, 1273, 1276, 1396, 1477, 1481 |
| BstV2I | GAAGAC | 2 cut(s) | 192, 861 |
| BstX2I | RGATCY | 3 cut(s) | 20, 1033, 1787 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1175, 1315 |
| BstYI | RGATCY | 3 cut(s) | 20, 1033, 1787 |
| BstZ17I | GTATAC | 1 cut(s) | 307 |
| BsuI | GTATCC | 1 cut(s) | 1657 |
| BsuRI | GGCC | 3 cut(s) | 56, 544, 1167 |
| BtgI | CCRYGG | 2 cut(s) | 1062, 1119 |
| BtsCI | GGATG | 5 cut(s) | 661, 971, 1168, 1324, 1629 |
| BtsI | GCAGTG | 1 cut(s) | 1780 |
| BtsIMutI | CAGTG | 3 cut(s) | 69, 1590, 1780 |
| BveI | ACCTGC | 2 cut(s) | 1124, 1353 |
| Cac8I | GCNNGC | 5 cut(s) | 7, 202, 1169, 1399, 1492 |
| Cfr13I | GGNCC | 2 cut(s) | 563, 913 |
| CseI | GACGC | 2 cut(s) | 648, 776 |
| Csp6I | GTAC | 3 cut(s) | 609, 810, 1091 |
| CviQI | GTAC | 3 cut(s) | 609, 810, 1091 |
| DdeI | CTNAG | 3 cut(s) | 324, 779, 1779 |
| DraI | TTTAAA | 1 cut(s) | 1353 |
| EaeI | YGGCCR | 1 cut(s) | 1165 |
| Eam1104I | CTCTTC | 1 cut(s) | 339 |
| EarI | CTCTTC | 1 cut(s) | 339 |
| Eco130I | CCWWGG | 2 cut(s) | 1062, 1389 |
| Eco147I | AGGCCT | 1 cut(s) | 56 |
| Eco24I | GRGCYC | 1 cut(s) | 839 |
| Eco31I | GGTCTC | 1 cut(s) | 1331 |
| Eco47I | GGWCC | 2 cut(s) | 563, 913 |
| Eco57I | CTGAAG | 4 cut(s) | 204, 363, 446, 870 |
| Eco88I | CYCGRG | 1 cut(s) | 1558 |
| Eco91I | GGTNACC | 2 cut(s) | 1179, 1226 |
| EcoO65I | GGTNACC | 2 cut(s) | 1179, 1226 |
| EcoRII | CCWGG | 5 cut(s) | 56, 226, 577, 772, 1147 |
| EcoT14I | CCWWGG | 2 cut(s) | 1062, 1389 |
| EcoT22I | ATGCAT | 1 cut(s) | 494 |
| EcoT38I | GRGCYC | 1 cut(s) | 839 |
| ErhI | CCWWGG | 2 cut(s) | 1062, 1389 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1373, 1405 |
| FaqI | GGGAC | 2 cut(s) | 899, 1747 |
| FbaI | TGATCA | 1 cut(s) | 1015 |
| FblI | GTMKAC | 3 cut(s) | 306, 662, 937 |
| Fnu4HI | GCNGC | 7 cut(s) | 321, 1010, 1287, 1290, 1410, 1466, 1495 |
| FokI | GGATG | 5 cut(s) | 668, 958, 1175, 1331, 1636 |
| FriOI | GRGCYC | 1 cut(s) | 839 |
| Fsp4HI | GCNGC | 7 cut(s) | 321, 1010, 1287, 1290, 1410, 1466, 1495 |
| FspBI | CTAG | 4 cut(s) | 503, 798, 807, 1716 |
| GluI | GCNGC | 7 cut(s) | 321, 1010, 1287, 1290, 1410, 1466, 1495 |
| HaeIII | GGCC | 3 cut(s) | 56, 544, 1167 |
| HgaI | GACGC | 2 cut(s) | 648, 776 |
| Hin1I | GRCGYC | 1 cut(s) | 787 |
| HincII | GTYRAC | 1 cut(s) | 663 |
| HindII | GTYRAC | 1 cut(s) | 663 |
| HindIII | AAGCTT | 3 cut(s) | 1278, 1382, 1395 |
| HinfI | GANTC | 7 cut(s) | 380, 419, 497, 707, 803, 955, 1603 |
| HphI | GGTGA | 3 cut(s) | 286, 361, 1173 |
| Hpy166II | GTNNAC | 4 cut(s) | 307, 663, 938, 1091 |
| Hpy8I | GTNNAC | 4 cut(s) | 307, 663, 938, 1091 |
| Hpy99I | CGWCG | 2 cut(s) | 664, 1811 |
| HpyAV | CCTTC | 7 cut(s) | 46, 350, 421, 1060, 1194, 1609, 1654 |
| HpyCH4III | ACNGT | 2 cut(s) | 1226, 1594 |
| HpyCH4IV | ACGT | 1 cut(s) | 1731 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 512, 784, 1139, 1241, 1286, 1849 |
| HpyF3I | CTNAG | 3 cut(s) | 324, 779, 1779 |
| HpySE526I | ACGT | 1 cut(s) | 1731 |
| Hsp92I | GRCGYC | 1 cut(s) | 787 |
| Ksp22I | TGATCA | 1 cut(s) | 1015 |
| LmnI | GCTCC | 4 cut(s) | 553, 842, 1249, 1269 |
| Lsp1109I | GCAGC | 7 cut(s) | 307, 1021, 1273, 1276, 1396, 1477, 1481 |
| MaeI | CTAG | 4 cut(s) | 503, 798, 807, 1716 |
| MaeII | ACGT | 1 cut(s) | 1731 |
| MaeIII | GTNAC | 4 cut(s) | 498, 1179, 1198, 1226 |
| MfeI | CAATTG | 1 cut(s) | 1485 |
| MflI | RGATCY | 3 cut(s) | 20, 1033, 1787 |
| MhlI | GDGCHC | 3 cut(s) | 330, 839, 1780 |
| MlsI | TGGCCA | 1 cut(s) | 1167 |
| MluNI | TGGCCA | 1 cut(s) | 1167 |
| MlyI | GAGTC | 3 cut(s) | 389, 506, 812 |
| MmeI | TCCRAC | 2 cut(s) | 82, 1695 |
| Mox20I | TGGCCA | 1 cut(s) | 1167 |
| Mph1103I | ATGCAT | 1 cut(s) | 494 |
| MscI | TGGCCA | 1 cut(s) | 1167 |
| MseI | TTAA | 7 cut(s) | 365, 474, 549, 668, 1352, 1433, 1832 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1317 |
| Msp20I | TGGCCA | 1 cut(s) | 1167 |
| MspA1I | CMGCKG | 1 cut(s) | 1171 |
| MspR9I | CCNGG | 5 cut(s) | 58, 228, 579, 774, 1149 |
| MunI | CAATTG | 1 cut(s) | 1485 |
| Mva1269I | GAATGC | 1 cut(s) | 1644 |
| MvaI | CCWGG | 5 cut(s) | 58, 228, 579, 774, 1149 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 512, 784, 1139, 1241, 1286, 1849 |
| NcoI | CCATGG | 1 cut(s) | 1062 |
| NlaIV | GGNNCC | 2 cut(s) | 838, 915 |
| NmuCI | GTSAC | 2 cut(s) | 498, 1179 |
| NsiI | ATGCAT | 1 cut(s) | 494 |
| NspI | RCATGY | 2 cut(s) | 204, 444 |
| NspV | TTCGAA | 2 cut(s) | 246, 406 |
| PaeI | GCATGC | 1 cut(s) | 204 |
| PaqCI | CACCTGC | 1 cut(s) | 1124 |
| PceI | AGGCCT | 1 cut(s) | 56 |
| PciI | ACATGT | 1 cut(s) | 440 |
| PctI | GAATGC | 1 cut(s) | 1644 |
| PfeI | GAWTC | 4 cut(s) | 419, 707, 955, 1603 |
| PkrI | GCNGC | 7 cut(s) | 322, 1011, 1288, 1291, 1411, 1467, 1496 |
| PleI | GAGTC | 3 cut(s) | 388, 505, 811 |
| PpsI | GAGTC | 3 cut(s) | 388, 505, 811 |
| PscI | ACATGT | 1 cut(s) | 440 |
| Psp6I | CCWGG | 5 cut(s) | 56, 226, 577, 772, 1147 |
| PspEI | GGTNACC | 2 cut(s) | 1179, 1226 |
| PspGI | CCWGG | 5 cut(s) | 56, 226, 577, 772, 1147 |
| PspN4I | GGNNCC | 2 cut(s) | 838, 915 |
| PspPI | GGNCC | 2 cut(s) | 563, 913 |
| PstI | CTGCAG | 1 cut(s) | 1364 |
| PsuI | RGATCY | 3 cut(s) | 20, 1033, 1787 |
| PvuII | CAGCTG | 1 cut(s) | 1171 |
| RsaI | GTAC | 3 cut(s) | 610, 811, 1092 |
| RsaNI | GTAC | 3 cut(s) | 609, 810, 1091 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1317 |
| SalI | GTCGAC | 1 cut(s) | 661 |
| SaqAI | TTAA | 7 cut(s) | 365, 474, 549, 668, 1352, 1433, 1832 |
| SatI | GCNGC | 7 cut(s) | 321, 1010, 1287, 1290, 1410, 1466, 1495 |
| Sau96I | GGNCC | 2 cut(s) | 563, 913 |
| SchI | GAGTC | 3 cut(s) | 389, 506, 812 |
| ScrFI | CCNGG | 5 cut(s) | 58, 228, 579, 774, 1149 |
| SduI | GDGCHC | 3 cut(s) | 330, 839, 1780 |
| SfcI | CTRYAG | 2 cut(s) | 1338, 1360 |
| SfuI | TTCGAA | 2 cut(s) | 246, 406 |
| SinI | GGWCC | 2 cut(s) | 563, 913 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1317 |
| SmlI | CTYRAG | 2 cut(s) | 142, 1655 |
| SmoI | CTYRAG | 2 cut(s) | 142, 1655 |
| SpeI | ACTAGT | 1 cut(s) | 797 |
| SphI | GCATGC | 1 cut(s) | 204 |
| SseBI | AGGCCT | 1 cut(s) | 56 |
| SsiI | CCGC | 3 cut(s) | 464, 582, 1235 |
| SspMI | CTAG | 4 cut(s) | 503, 798, 807, 1716 |
| StuI | AGGCCT | 1 cut(s) | 56 |
| StyD4I | CCNGG | 5 cut(s) | 56, 226, 577, 772, 1147 |
| StyI | CCWWGG | 2 cut(s) | 1062, 1389 |
| TaaI | ACNGT | 2 cut(s) | 1226, 1594 |
| TaiI | ACGT | 1 cut(s) | 1734 |
| TatI | WGTACW | 2 cut(s) | 608, 1090 |
| TfiI | GAWTC | 4 cut(s) | 419, 707, 955, 1603 |
| Tru1I | TTAA | 7 cut(s) | 365, 474, 549, 668, 1352, 1433, 1832 |
| Tru9I | TTAA | 7 cut(s) | 365, 474, 549, 668, 1352, 1433, 1832 |
| TscAI | CASTG | 3 cut(s) | 76, 1597, 1780 |
| TseFI | GTSAC | 2 cut(s) | 498, 1179 |
| TseI | GCWGC | 7 cut(s) | 320, 1009, 1286, 1289, 1409, 1465, 1494 |
| Tsp45I | GTSAC | 2 cut(s) | 498, 1179 |
| TspDTI | ATGAA | 3 cut(s) | 26, 210, 1176 |
| TspGWI | ACGGA | 3 cut(s) | 204, 1111, 1824 |
| TspRI | CASTG | 3 cut(s) | 76, 1597, 1780 |
| VpaK11BI | GGWCC | 2 cut(s) | 563, 913 |
| XapI | RAATTY | 3 cut(s) | 923, 985, 1255 |
| XceI | RCATGY | 2 cut(s) | 204, 444 |
| XmiI | GTMKAC | 3 cut(s) | 306, 662, 937 |
| XspI | CTAG | 4 cut(s) | 503, 798, 807, 1716 |
| Zsp2I | ATGCAT | 1 cut(s) | 494 |