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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G30900 AT2G34940 AT4G20110 AT4G20110 |
| fragaria_vesca | FvH4_3g13190 FvH4_3g13190 |
| malus_domestica | MD05G1244500.v1.1 MD10G1226100.v1.1 |
| prunus_persica | Prupe.4G119200_v2.0.a1 Prupe.4G119200_v2.0.a1 Prupe.4G119200_v2.0.a1 |
| pyrus_communis | pycom05g22100 pycom10g19000 |
| rosa_chinensis | RchiOBHm_Chr5g0021401 |
| rosa_laevigata | RLG00000032610 |
| rosa_multiflora | Rmu_co8489967.1_g000001 Rmu_sc0004847.1_g000021 |
| rosa_roxburghii | Rroxscaffold_1G00057140 |
| rosa_rugosa | Rorug05G0067000 |
| rosa_samantha | Rh5AG156100 Rh5BG155600 Rh5CG169300 Rh5DG156100 |
| rosa_wichuraiana | Rw5G013900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 654 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1850 |
| AccII | CGCG | 2 cut(s) | 1095, 1146 |
| AccIII | TCCGGA | 1 cut(s) | 550 |
| AciI | CCGC | 6 cut(s) | 127, 1093, 1095, 1144, 1146, 1674 |
| AclWI | GGATC | 4 cut(s) | 1019, 1223, 1684, 1835 |
| AcsI | RAATTY | 2 cut(s) | 257, 625 |
| AcuI | CTGAAG | 2 cut(s) | 539, 1058 |
| AdeI | CACNNNGTG | 1 cut(s) | 611 |
| AfaI | GTAC | 3 cut(s) | 1170, 1356, 1811 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 173, 889, 1212, 1850 |
| AflII | CTTAAG | 2 cut(s) | 494, 1172 |
| AgeI | ACCGGT | 1 cut(s) | 882 |
| AgsI | TTSAA | 9 cut(s) | 250, 643, 665, 933, 980, 1057, 1195, 1238, 1613 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1285 |
| AjnI | CCWGG | 1 cut(s) | 1504 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 783, 815 |
| Alw21I | GWGCWC | 2 cut(s) | 607, 781 |
| Alw26I | GTCTC | 7 cut(s) | 753, 838, 1256, 1475, 1640, 1769, 1809 |
| Alw44I | GTGCAC | 1 cut(s) | 603 |
| AlwI | GGATC | 4 cut(s) | 1019, 1223, 1684, 1835 |
| Ama87I | CYCGRG | 1 cut(s) | 1211 |
| Aor13HI | TCCGGA | 1 cut(s) | 550 |
| AoxI | GGCC | 1 cut(s) | 1396 |
| ApaLI | GTGCAC | 1 cut(s) | 603 |
| ApeKI | GCWGC | 5 cut(s) | 143, 344, 1497, 1715, 1889 |
| ApoI | RAATTY | 2 cut(s) | 257, 625 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 452, 484, 815, 847 |
| AsiGI | ACCGGT | 1 cut(s) | 882 |
| AspLEI | GCGC | 1 cut(s) | 655 |
| AspS9I | GGNCC | 1 cut(s) | 1397 |
| AsuC2I | CCSGG | 2 cut(s) | 1212, 1213 |
| AsuHPI | GGTGA | 6 cut(s) | 387, 515, 815, 1034, 1100, 1865 |
| AvaI | CYCGRG | 1 cut(s) | 1211 |
| AxyI | CCTNAGG | 1 cut(s) | 399 |
| BaeGI | GKGCMC | 1 cut(s) | 607 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 802, 835 |
| BbsI | GAAGAC | 2 cut(s) | 823, 1542 |
| Bbv12I | GWGCWC | 2 cut(s) | 607, 781 |
| BbvI | GCAGC | 4 cut(s) | 155, 356, 1484, 1702 |
| BccI | CCATC | 7 cut(s) | 454, 800, 809, 1364, 1514, 1571, 1683 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1392, 1426 |
| BciT130I | CCWGG | 1 cut(s) | 1506 |
| BciVI | GTATCC | 2 cut(s) | 668, 803 |
| BclI | TGATCA | 1 cut(s) | 279 |
| BcnI | CCSGG | 2 cut(s) | 1212, 1213 |
| BcoDI | GTCTC | 7 cut(s) | 753, 838, 1256, 1475, 1640, 1769, 1809 |
| BfaI | CTAG | 4 cut(s) | 41, 732, 986, 1712 |
| BfmI | CTRYAG | 2 cut(s) | 1716, 1887 |
| BfrI | CTTAAG | 2 cut(s) | 494, 1172 |
| BfuI | GTATCC | 2 cut(s) | 668, 803 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 29 |
| BisI | GCNGC | 5 cut(s) | 144, 345, 1498, 1716, 1890 |
| BlpI | GCTNAGC | 1 cut(s) | 1062 |
| BlsI | GCNGC | 5 cut(s) | 145, 346, 1499, 1717, 1891 |
| BmcAI | AGTACT | 1 cut(s) | 1170 |
| Bme1390I | CCNGG | 3 cut(s) | 1212, 1213, 1506 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1285 |
| BmeT110I | CYCGRG | 1 cut(s) | 1211 |
| BmgT120I | GGNCC | 1 cut(s) | 1397 |
| BmiI | GGNNCC | 3 cut(s) | 22, 193, 1694 |
| BmrFI | CCNGG | 3 cut(s) | 1212, 1213, 1506 |
| BmsI | GCATC | 3 cut(s) | 1021, 1397, 1571 |
| BpiI | GAAGAC | 2 cut(s) | 823, 1542 |
| BpmI | CTGGAG | 2 cut(s) | 550, 1488 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1062 |
| BpuEI | CTTGAG | 3 cut(s) | 467, 862, 1175 |
| BpuMI | CCSGG | 2 cut(s) | 1212, 1213 |
| Bsa29I | ATCGAT | 1 cut(s) | 285 |
| BsaAI | YACGTR | 1 cut(s) | 1747 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1378 |
| BsaJI | CCNNGG | 7 cut(s) | 27, 763, 1093, 1144, 1211, 1420, 1505 |
| BsaWI | WCCGGW | 3 cut(s) | 335, 550, 882 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 760, 790, 932, 962 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 173, 889, 1212, 1850 |
| Bse118I | RCCGGY | 2 cut(s) | 206, 882 |
| Bse1I | ACTGG | 2 cut(s) | 533, 1855 |
| Bse21I | CCTNAGG | 1 cut(s) | 399 |
| Bse3DI | GCAATG | 2 cut(s) | 129, 147 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1378 |
| BseAI | TCCGGA | 1 cut(s) | 550 |
| BseBI | CCWGG | 1 cut(s) | 1506 |
| BseCI | ATCGAT | 1 cut(s) | 285 |
| BseDI | CCNNGG | 7 cut(s) | 27, 763, 1093, 1144, 1211, 1420, 1505 |
| BseGI | GGATG | 6 cut(s) | 230, 547, 559, 1496, 1586, 1694 |
| BseJI | GATNNNNATC | 1 cut(s) | 1378 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 173, 889, 1212, 1850 |
| BseMI | GCAATG | 2 cut(s) | 129, 147 |
| BseMII | CTCAG | 6 cut(s) | 390, 764, 1053, 1780, 1820, 1865 |
| BseNI | ACTGG | 2 cut(s) | 533, 1855 |
| BseSI | GKGCMC | 1 cut(s) | 607 |
| BseXI | GCAGC | 4 cut(s) | 155, 356, 1484, 1702 |
| BsgI | GTGCAG | 1 cut(s) | 984 |
| Bsh1236I | CGCG | 2 cut(s) | 1095, 1146 |
| Bsh1285I | CGRYCG | 1 cut(s) | 289 |
| BshFI | GGCC | 1 cut(s) | 1398 |
| BshTI | ACCGGT | 1 cut(s) | 882 |
| BshVI | ATCGAT | 1 cut(s) | 285 |
| BsiEI | CGRYCG | 1 cut(s) | 289 |
| BsiHKAI | GWGCWC | 2 cut(s) | 607, 781 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1211 |
| BsiSI | CCGG | 5 cut(s) | 207, 336, 551, 883, 1212 |
| BslFI | GGGAC | 1 cut(s) | 914 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 173, 889, 1212, 1850 |
| BsmAI | GTCTC | 7 cut(s) | 753, 838, 1256, 1475, 1640, 1769, 1809 |
| BsmBI | CGTCTC | 2 cut(s) | 1640, 1769 |
| BsmFI | GGGAC | 1 cut(s) | 914 |
| BsmI | GAATGC | 2 cut(s) | 1340, 1619 |
| BsnI | GGCC | 1 cut(s) | 1398 |
| BsoBI | CYCGRG | 1 cut(s) | 1211 |
| Bsp1286I | GDGCHC | 2 cut(s) | 607, 781 |
| Bsp13I | TCCGGA | 1 cut(s) | 550 |
| Bsp1407I | TGTACA | 1 cut(s) | 1354 |
| Bsp143I | GATC | 9 cut(s) | 186, 279, 286, 1005, 1024, 1122, 1215, 1676, 1840 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1062 |
| BspACI | CCGC | 6 cut(s) | 127, 1093, 1095, 1144, 1146, 1674 |
| BspANI | GGCC | 1 cut(s) | 1398 |
| BspCNI | CTCAG | 6 cut(s) | 391, 763, 1054, 1779, 1819, 1866 |
| BspDI | ATCGAT | 1 cut(s) | 285 |
| BspEI | TCCGGA | 1 cut(s) | 550 |
| BspFNI | CGCG | 2 cut(s) | 1095, 1146 |
| BspLI | GGNNCC | 3 cut(s) | 22, 193, 1694 |
| BspMAI | CTGCAG | 2 cut(s) | 1720, 1891 |
| BspPI | GGATC | 4 cut(s) | 1019, 1223, 1684, 1835 |
| BspTI | CTTAAG | 2 cut(s) | 494, 1172 |
| BsrDI | GCAATG | 2 cut(s) | 129, 147 |
| BsrFI | RCCGGY | 2 cut(s) | 206, 882 |
| BsrGI | TGTACA | 1 cut(s) | 1354 |
| BsrI | ACTGG | 2 cut(s) | 533, 1855 |
| BssAI | RCCGGY | 2 cut(s) | 206, 882 |
| BssECI | CCNNGG | 7 cut(s) | 27, 763, 1093, 1144, 1211, 1420, 1505 |
| BssMI | GATC | 9 cut(s) | 186, 279, 286, 1005, 1024, 1122, 1215, 1676, 1840 |
| BssT1I | CCWWGG | 3 cut(s) | 27, 763, 1420 |
| Bst2UI | CCWGG | 1 cut(s) | 1506 |
| Bst4CI | ACNGT | 6 cut(s) | 176, 326, 609, 849, 1359, 1589 |
| Bst6I | CTCTTC | 2 cut(s) | 86, 1318 |
| BstAFI | CTTAAG | 2 cut(s) | 494, 1172 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 149 |
| BstAUI | TGTACA | 1 cut(s) | 1354 |
| BstBAI | YACGTR | 1 cut(s) | 1747 |
| BstC8I | GCNNGC | 5 cut(s) | 489, 1068, 1303, 1468, 1726 |
| BstDEI | CTNAG | 8 cut(s) | 132, 399, 750, 1062, 1223, 1766, 1806, 1874 |
| BstDSI | CCRYGG | 2 cut(s) | 1093, 1144 |
| BstEII | GGTNACC | 1 cut(s) | 1088 |
| BstF5I | GGATG | 6 cut(s) | 230, 547, 559, 1496, 1586, 1694 |
| BstFNI | CGCG | 2 cut(s) | 1095, 1146 |
| BstHHI | GCGC | 1 cut(s) | 655 |
| BstKTI | GATC | 9 cut(s) | 189, 282, 289, 1008, 1027, 1125, 1218, 1679, 1843 |
| BstMAI | GTCTC | 7 cut(s) | 753, 838, 1256, 1475, 1640, 1769, 1809 |
| BstMBI | GATC | 9 cut(s) | 186, 279, 286, 1005, 1024, 1122, 1215, 1676, 1840 |
| BstMCI | CGRYCG | 1 cut(s) | 289 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 29, 133, 149, 1067, 1614, 1721 |
| BstNI | CCWGG | 1 cut(s) | 1506 |
| BstNSI | RCATGY | 2 cut(s) | 653, 1816 |
| BstPI | GGTNACC | 1 cut(s) | 1088 |
| BstSCI | CCNGG | 3 cut(s) | 1210, 1211, 1504 |
| BstSFI | CTRYAG | 2 cut(s) | 1716, 1887 |
| BstSLI | GKGCMC | 1 cut(s) | 607 |
| BstSNI | TACGTA | 1 cut(s) | 1747 |
| BstUI | CGCG | 2 cut(s) | 1095, 1146 |
| BstV1I | GCAGC | 4 cut(s) | 155, 356, 1484, 1702 |
| BstV2I | GAAGAC | 2 cut(s) | 823, 1542 |
| BstX2I | RGATCY | 1 cut(s) | 1215 |
| BstYI | RGATCY | 1 cut(s) | 1215 |
| Bsu15I | ATCGAT | 1 cut(s) | 285 |
| Bsu36I | CCTNAGG | 1 cut(s) | 399 |
| BsuI | GTATCC | 2 cut(s) | 668, 803 |
| BsuRI | GGCC | 1 cut(s) | 1398 |
| BsuTUI | ATCGAT | 1 cut(s) | 285 |
| BtgI | CCRYGG | 2 cut(s) | 1093, 1144 |
| BtsCI | GGATG | 6 cut(s) | 230, 547, 559, 1496, 1586, 1694 |
| BtsIMutI | CAGTG | 1 cut(s) | 758 |
| Cac8I | GCNNGC | 5 cut(s) | 489, 1068, 1303, 1468, 1726 |
| CfoI | GCGC | 1 cut(s) | 655 |
| Cfr10I | RCCGGY | 2 cut(s) | 206, 882 |
| Cfr13I | GGNCC | 1 cut(s) | 1397 |
| Cfr42I | CCGCGG | 2 cut(s) | 1096, 1147 |
| Cfr9I | CCCGGG | 1 cut(s) | 1211 |
| ClaI | ATCGAT | 1 cut(s) | 285 |
| CseI | GACGC | 1 cut(s) | 149 |
| Csp6I | GTAC | 3 cut(s) | 1169, 1355, 1810 |
| CspAI | ACCGGT | 1 cut(s) | 882 |
| CviAII | CATG | 7 cut(s) | 184, 650, 705, 1383, 1642, 1792, 1813 |
| CviQI | GTAC | 3 cut(s) | 1169, 1355, 1810 |
| DdeI | CTNAG | 8 cut(s) | 132, 399, 750, 1062, 1223, 1766, 1806, 1874 |
| DpnI | GATC | 9 cut(s) | 188, 281, 288, 1007, 1026, 1124, 1217, 1678, 1842 |
| DpnII | GATC | 9 cut(s) | 186, 279, 286, 1005, 1024, 1122, 1215, 1676, 1840 |
| DraI | TTTAAA | 1 cut(s) | 1513 |
| DraIII | CACNNNGTG | 1 cut(s) | 611 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1285 |
| Eam1104I | CTCTTC | 2 cut(s) | 86, 1318 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1285 |
| EarI | CTCTTC | 2 cut(s) | 86, 1318 |
| Eco105I | TACGTA | 1 cut(s) | 1747 |
| Eco130I | CCWWGG | 3 cut(s) | 27, 763, 1420 |
| Eco57I | CTGAAG | 2 cut(s) | 539, 1058 |
| Eco81I | CCTNAGG | 1 cut(s) | 399 |
| Eco88I | CYCGRG | 1 cut(s) | 1211 |
| Eco91I | GGTNACC | 1 cut(s) | 1088 |
| EcoO65I | GGTNACC | 1 cut(s) | 1088 |
| EcoRII | CCWGG | 1 cut(s) | 1504 |
| EcoT14I | CCWWGG | 3 cut(s) | 27, 763, 1420 |
| ErhI | CCWWGG | 3 cut(s) | 27, 763, 1420 |
| Esp3I | CGTCTC | 2 cut(s) | 1640, 1769 |
| FaeI | CATG | 7 cut(s) | 187, 653, 708, 1386, 1645, 1795, 1816 |
| FaqI | GGGAC | 1 cut(s) | 914 |
| FatI | CATG | 7 cut(s) | 183, 649, 704, 1382, 1641, 1791, 1812 |
| FauNDI | CATATG | 1 cut(s) | 1730 |
| FbaI | TGATCA | 1 cut(s) | 279 |
| Fnu4HI | GCNGC | 5 cut(s) | 144, 345, 1498, 1716, 1890 |
| FokI | GGATG | 6 cut(s) | 237, 534, 566, 1503, 1593, 1701 |
| Fsp4HI | GCNGC | 5 cut(s) | 144, 345, 1498, 1716, 1890 |
| FspBI | CTAG | 4 cut(s) | 41, 732, 986, 1712 |
| FspI | TGCGCA | 1 cut(s) | 654 |
| GlaI | GCGC | 1 cut(s) | 654 |
| GluI | GCNGC | 5 cut(s) | 144, 345, 1498, 1716, 1890 |
| GsuI | CTGGAG | 2 cut(s) | 550, 1488 |
| HaeIII | GGCC | 1 cut(s) | 1398 |
| HapII | CCGG | 5 cut(s) | 207, 336, 551, 883, 1212 |
| HgaI | GACGC | 1 cut(s) | 149 |
| HhaI | GCGC | 1 cut(s) | 655 |
| Hin1II | CATG | 7 cut(s) | 187, 653, 708, 1386, 1645, 1795, 1816 |
| Hin6I | GCGC | 1 cut(s) | 653 |
| HinP1I | GCGC | 1 cut(s) | 653 |
| HincII | GTYRAC | 4 cut(s) | 48, 61, 329, 1129 |
| HindII | GTYRAC | 4 cut(s) | 48, 61, 329, 1129 |
| HpaII | CCGG | 5 cut(s) | 207, 336, 551, 883, 1212 |
| HphI | GGTGA | 6 cut(s) | 387, 515, 815, 1034, 1100, 1865 |
| Hpy188I | TCNGA | 3 cut(s) | 1438, 1688, 1786 |
| Hpy99I | CGWCG | 3 cut(s) | 143, 200, 371 |
| HpyAV | CCTTC | 1 cut(s) | 931 |
| HpyCH4III | ACNGT | 6 cut(s) | 176, 326, 609, 849, 1359, 1589 |
| HpyCH4IV | ACGT | 2 cut(s) | 366, 1746 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 29, 133, 149, 1067, 1614, 1721 |
| HpyF3I | CTNAG | 8 cut(s) | 132, 399, 750, 1062, 1223, 1766, 1806, 1874 |
| HpySE526I | ACGT | 2 cut(s) | 366, 1746 |
| Hsp92II | CATG | 7 cut(s) | 187, 653, 708, 1386, 1645, 1795, 1816 |
| HspAI | GCGC | 1 cut(s) | 653 |
| Kpn2I | TCCGGA | 1 cut(s) | 550 |
| Ksp22I | TGATCA | 1 cut(s) | 279 |
| KspI | CCGCGG | 2 cut(s) | 1096, 1147 |
| Kzo9I | GATC | 9 cut(s) | 186, 279, 286, 1005, 1024, 1122, 1215, 1676, 1840 |
| LmnI | GCTCC | 5 cut(s) | 20, 197, 215, 784, 1555 |
| Lsp1109I | GCAGC | 4 cut(s) | 155, 356, 1484, 1702 |
| LweI | GCATC | 3 cut(s) | 1021, 1397, 1571 |
| MaeI | CTAG | 4 cut(s) | 41, 732, 986, 1712 |
| MaeII | ACGT | 2 cut(s) | 366, 1746 |
| MaeIII | GTNAC | 9 cut(s) | 100, 179, 227, 299, 907, 1088, 1102, 1294, 1742 |
| MalI | GATC | 9 cut(s) | 188, 281, 288, 1007, 1026, 1124, 1217, 1678, 1842 |
| MboI | GATC | 9 cut(s) | 186, 279, 286, 1005, 1024, 1122, 1215, 1676, 1840 |
| MboII | GAAGA | 6 cut(s) | 103, 532, 823, 955, 1335, 1547 |
| MflI | RGATCY | 1 cut(s) | 1215 |
| MhlI | GDGCHC | 2 cut(s) | 607, 781 |
| MluCI | AATT | 2 cut(s) | 257, 625 |
| MlyI | GAGTC | 3 cut(s) | 224, 545, 1335 |
| MroI | TCCGGA | 1 cut(s) | 550 |
| MseI | TTAA | 9 cut(s) | 311, 455, 495, 1173, 1416, 1454, 1512, 1527, 1880 |
| MslI | CAYNNNNRTG | 2 cut(s) | 552, 1489 |
| MspA1I | CMGCKG | 3 cut(s) | 1095, 1146, 1873 |
| MspCI | CTTAAG | 2 cut(s) | 494, 1172 |
| MspI | CCGG | 5 cut(s) | 207, 336, 551, 883, 1212 |
| MspR9I | CCNGG | 3 cut(s) | 1212, 1213, 1506 |
| Mva1269I | GAATGC | 2 cut(s) | 1340, 1619 |
| MvaI | CCWGG | 1 cut(s) | 1506 |
| MvnI | CGCG | 2 cut(s) | 1095, 1146 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 29, 133, 149, 1067, 1614, 1721 |
| NciI | CCSGG | 2 cut(s) | 1212, 1213 |
| NdeI | CATATG | 1 cut(s) | 1730 |
| NdeII | GATC | 9 cut(s) | 186, 279, 286, 1005, 1024, 1122, 1215, 1676, 1840 |
| NlaIII | CATG | 7 cut(s) | 187, 653, 708, 1386, 1645, 1795, 1816 |
| NlaIV | GGNNCC | 3 cut(s) | 22, 193, 1694 |
| NmeAIII | GCCGAG | 1 cut(s) | 1442 |
| NmuCI | GTSAC | 5 cut(s) | 100, 227, 907, 1088, 1102 |
| NsbI | TGCGCA | 1 cut(s) | 654 |
| NspI | RCATGY | 2 cut(s) | 653, 1816 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 195, 1469 |
| PctI | GAATGC | 2 cut(s) | 1340, 1619 |
| PflFI | GACNNNGTC | 1 cut(s) | 827 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1850 |
| PinAI | ACCGGT | 1 cut(s) | 882 |
| PkrI | GCNGC | 5 cut(s) | 145, 346, 1499, 1717, 1891 |
| Ple19I | CGATCG | 1 cut(s) | 289 |
| PleI | GAGTC | 3 cut(s) | 224, 544, 1334 |
| PpsI | GAGTC | 3 cut(s) | 224, 544, 1334 |
| Ppu21I | YACGTR | 1 cut(s) | 1747 |
| Psp6I | CCWGG | 1 cut(s) | 1504 |
| PspEI | GGTNACC | 1 cut(s) | 1088 |
| PspGI | CCWGG | 1 cut(s) | 1504 |
| PspN4I | GGNNCC | 3 cut(s) | 22, 193, 1694 |
| PspPI | GGNCC | 1 cut(s) | 1397 |
| PstI | CTGCAG | 2 cut(s) | 1720, 1891 |
| PsuI | RGATCY | 1 cut(s) | 1215 |
| PsyI | GACNNNGTC | 1 cut(s) | 827 |
| PvuI | CGATCG | 1 cut(s) | 289 |
| PvuII | CAGCTG | 1 cut(s) | 1873 |
| RsaI | GTAC | 3 cut(s) | 1170, 1356, 1811 |
| RsaNI | GTAC | 3 cut(s) | 1169, 1355, 1810 |
| RseI | CAYNNNNRTG | 2 cut(s) | 552, 1489 |
| SacII | CCGCGG | 2 cut(s) | 1096, 1147 |
| SaqAI | TTAA | 9 cut(s) | 311, 455, 495, 1173, 1416, 1454, 1512, 1527, 1880 |
| SatI | GCNGC | 5 cut(s) | 144, 345, 1498, 1716, 1890 |
| Sau3AI | GATC | 9 cut(s) | 186, 279, 286, 1005, 1024, 1122, 1215, 1676, 1840 |
| Sau96I | GGNCC | 1 cut(s) | 1397 |
| ScaI | AGTACT | 1 cut(s) | 1170 |
| SchI | GAGTC | 3 cut(s) | 224, 545, 1335 |
| ScrFI | CCNGG | 3 cut(s) | 1212, 1213, 1506 |
| SduI | GDGCHC | 2 cut(s) | 607, 781 |
| SfaNI | GCATC | 3 cut(s) | 1021, 1397, 1571 |
| SfcI | CTRYAG | 2 cut(s) | 1716, 1887 |
| Sfr303I | CCGCGG | 2 cut(s) | 1096, 1147 |
| SgrBI | CCGCGG | 2 cut(s) | 1096, 1147 |
| SmaI | CCCGGG | 1 cut(s) | 1213 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 552, 1489 |
| SmlI | CTYRAG | 5 cut(s) | 482, 494, 841, 1154, 1172 |
| SmoI | CTYRAG | 5 cut(s) | 482, 494, 841, 1154, 1172 |
| SnaBI | TACGTA | 1 cut(s) | 1747 |
| Sse9I | AATT | 2 cut(s) | 257, 625 |
| SsiI | CCGC | 6 cut(s) | 127, 1093, 1095, 1144, 1146, 1674 |
| SspMI | CTAG | 4 cut(s) | 41, 732, 986, 1712 |
| StyD4I | CCNGG | 3 cut(s) | 1210, 1211, 1504 |
| StyI | CCWWGG | 3 cut(s) | 27, 763, 1420 |
| TaaI | ACNGT | 6 cut(s) | 176, 326, 609, 849, 1359, 1589 |
| TaiI | ACGT | 2 cut(s) | 369, 1749 |
| TaqI | TCGA | 6 cut(s) | 285, 369, 834, 1254, 1412, 1472 |
| TasI | AATT | 2 cut(s) | 257, 625 |
| TatI | WGTACW | 3 cut(s) | 1168, 1354, 1809 |
| Tru1I | TTAA | 9 cut(s) | 311, 455, 495, 1173, 1416, 1454, 1512, 1527, 1880 |
| Tru9I | TTAA | 9 cut(s) | 311, 455, 495, 1173, 1416, 1454, 1512, 1527, 1880 |
| TscAI | CASTG | 1 cut(s) | 758 |
| TseFI | GTSAC | 5 cut(s) | 100, 227, 907, 1088, 1102 |
| TseI | GCWGC | 5 cut(s) | 143, 344, 1497, 1715, 1889 |
| Tsp45I | GTSAC | 5 cut(s) | 100, 227, 907, 1088, 1102 |
| TspDTI | ATGAA | 7 cut(s) | 70, 638, 848, 950, 1062, 1260, 1658 |
| TspGWI | ACGGA | 2 cut(s) | 78, 184 |
| TspMI | CCCGGG | 1 cut(s) | 1211 |
| TspRI | CASTG | 1 cut(s) | 758 |
| Tth111I | GACNNNGTC | 1 cut(s) | 827 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1850 |
| Vha464I | CTTAAG | 2 cut(s) | 494, 1172 |
| VneI | GTGCAC | 1 cut(s) | 603 |
| XapI | RAATTY | 2 cut(s) | 257, 625 |
| XceI | RCATGY | 2 cut(s) | 653, 1816 |
| XmaI | CCCGGG | 1 cut(s) | 1211 |
| XspI | CTAG | 4 cut(s) | 41, 732, 986, 1712 |
| ZrmI | AGTACT | 1 cut(s) | 1170 |