MD05G1244500.v1.1

Vacuolar-sorting receptor

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
37686510 .. 37691550
5041 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1244500.v1.1.491

Sequence Viewer

Length: 1914 bp
ATGGCTTTTCTGCCAAAGCTCACAGCTTTTTTTGTGGTGTTGTTATCAGTTTTTGAGAACCATGTGCATGCAAGGTTTGTGGTGGAGACGGAAAGCATTAAGGTTCTCTATCCAATGAGCTTGCGCTCGAAGCACGACGGAGCTATCGGCAATTTTGGGCGGCCGAACTATGGAGGCTCCCTGGTGGGCGCTGTTGTCTATCCTGAAAAGGGGTCTTCCGGGTGTGAAGCTTTTGAGGGTGACAAGCCTTTCAAGTCGAGACACTGTCGCTCCACCATTGTTTTACTTGATCGCGGAGGTTGCTACTTTGCTTTGAAGGTGTGGAATGCTCAACAGGCGGGAGCTAAAGCCGTTTTAGTGGCGGATAACATTGAAGAGCCTTTAATAACAATGGATTCCCCGGAAGAGAGCACAGATGCAGATGGTTACATAGAGAAGATTGGAATTCCATCAGCTCTGGTAGAGAAAGCTTTTGGTGATAGCTTGAAGGAAGCGTTAAAGAAGAAAGAAGATGTTGTGGTGAAACTTGACTGGAGAGAGTCCGTGCCAAACCCCGATCAAAGAGTTGAATACGAGTTCTGGACAAACAGCAACGACGAGTGTGGGGCTCGTTGTGATGAGCAAATGACATTTGTAAAAAATTTCAAGGGTCACGCTCAGGTTCTTGAGAGAGGGGGTTACACCCTCTTCACTCCACATTATATAACTTGGTATTGTCCTCGGGCTTTCATCCTTACAAAACAGTGCAAGTCTCAATGCATAAATCATGGGAGGTATTGTGCACCGGATCCTGAAAAAGATTTGGGAGAAGGGTACCAAGGGAAGGACGTGGTATACGAGAACTTGAGGCAGCTTTGTGTGCATAGAGTTGCCAATGAGAGCGGCCGGTCATGGGTTTGGTGGGACTATGTGACAGACTTCCATATCAGATGTTCAATGAAAGAAAAGAAGTATAGCAAAGAATGCGCTGAGGATGTCATGAAATCACTTGATTTGCCTGTTGACAAGATAAAAAAATGTATGGGTAATCCTGAAGATGATGCCGAGAATGCAGTGCTAAAAGCCGAACAAGAAATCCAGGTTGGACGAGGATCTCGTGGTGATGTTACCATCTTGCCGACTTTGGTTATTAACAATGTTCAGTTTCGAGGAAAATTAGAGAGAACTACTGTGCTAAAGGCCTTATGTGCTGGATTTAAGGAGATGGCTGATCCTCCTATTTGTTTGACTGGAGACCTCGAGACAAATGAGTGCGTTGAAAGGAATGGCGGTTGTTGGCAGGACATCCACTCTAATATAACTGCTTGCAAGGACACATTTAGGGGAAGAGTTTGTGAGTGCCCTATTGTGAACGGTGTTCAGTATAGAGGCGATGGTTATACATCTTGCGATGCTTTTGGACCTGCAAGATGTGCTATAAGCAATGGAGGTTGCTGGTCAGAATCTAAAAATGGATTGCATTTCTCAGCTTGCTCAAATTCTGAGTTATCTGGCTGCAAATGTCCACAAGGCTTTCAAGGGGACGGTCATAAATGTGAAGATATTGATGAATGCAAGGCGCATACTGCTTGTCAGTGTGATGGTTGCAGCTGTAAGAACACTTGGGGCGGGTACAACTGCAAATGTAAGGCAGGCCAGTTGTATATGAAGGAGCAAGATACTTGTATTGAGAGACATGGATCAAGATTTGCCTGGTTTTTAACTTTCATGGTCCTTGCGGCTGTGTCGGGAGTTGGCCTAGCCGGTTACATCTTCTACAAATACAGGCTTCGATCTTACATGGACTCTGAGATCACGGCTATCATGTCGCAATACATGCCTCTGGACAGTCAGCAGGCCAGTCAAGTGCACACCGCCGACTCAGAACCTCAACGACAAGGCTCAAAACACAAGCTAAACCACCTATTCCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

638

Amino Acids

71.2

Weight (kDa)

6.14

Isoelectric Point (pI)

41.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PA PF02225 63 - 162 3.3e-17 PA domain
VSR_TRX PF25011 189 - 396 1.2e-102 Vacuolar sorting receptor thioredoxin-like domain
cEGF PF12662 499 - 517 1.4e-06 Complement Clr-like EGF-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1411
Acc65I GGTACC 1 cut(s) 813
AccB1I GGYRCC 1 cut(s) 813
AccBSI CCGCTC 1 cut(s) 882
AccI GTMKAC 1 cut(s) 834
AccII CGCG 1 cut(s) 294
AciI CCGC 9 cut(s) 160, 294, 338, 362, 882, 1269, 1608, 1718, 1854
AclWI GGATC 5 cut(s) 782, 795, 1099, 1205, 1687
AcoI YGGCCR 2 cut(s) 161, 883
AcsI RAATTY 3 cut(s) 444, 640, 1477
AcuI CTGAAG 1 cut(s) 1053
AfaI GTAC 2 cut(s) 815, 1613
AfiI CCNNNNNNNGG 4 cut(s) 170, 209, 823, 892
AgsI TTSAA 9 cut(s) 253, 316, 374, 487, 569, 646, 936, 1259, 1517
AjiI CACGTC 1 cut(s) 829
AjnI CCWGG 3 cut(s) 180, 1077, 1691
AjuI GAANNNNNNNTTGG 2 cut(s) 1065, 1097
AloI GAACNNNNNNTCC 2 cut(s) 1059, 1091
Alw21I GWGCWC 3 cut(s) 413, 784, 1851
Alw26I GTCTC 6 cut(s) 80, 253, 756, 1227, 1235, 1666
Alw44I GTGCAC 2 cut(s) 780, 1847
AlwI GGATC 5 cut(s) 782, 795, 1099, 1205, 1687
Ama87I CYCGRG 2 cut(s) 720, 1238
AoxI GGCC 6 cut(s) 161, 883, 1179, 1633, 1735, 1836
ApaLI GTGCAC 2 cut(s) 780, 1847
ApeKI GCWGC 3 cut(s) 850, 1494, 1587
ApoI RAATTY 3 cut(s) 444, 640, 1477
Asp718I GGTACC 1 cut(s) 813
AspLEI GCGC 4 cut(s) 126, 191, 968, 1561
AspS9I GGNCC 2 cut(s) 1400, 1711
AsuC2I CCSGG 2 cut(s) 220, 401
AsuHPI GGTGA 4 cut(s) 251, 488, 532, 1112
AvaI CYCGRG 2 cut(s) 720, 1238
AvaII GGWCC 2 cut(s) 1400, 1711
BaeGI GKGCMC 3 cut(s) 784, 1343, 1851
BamHI GGATCC 1 cut(s) 787
BanI GGYRCC 1 cut(s) 813
BanII GRGCYC 1 cut(s) 610
BauI CACGAG 1 cut(s) 1095
BbsI GAAGAC 1 cut(s) 207
Bbv12I GWGCWC 3 cut(s) 413, 784, 1851
BbvCI CCTCAGC 1 cut(s) 969
BbvI GCAGC 3 cut(s) 862, 1481, 1599
BccI CCATC 6 cut(s) 416, 457, 1118, 1198, 1367, 1574
BceAI ACGGC 2 cut(s) 335, 1812
BciT130I CCWGG 3 cut(s) 182, 1079, 1693
BcnI CCSGG 2 cut(s) 220, 401
BcoDI GTCTC 6 cut(s) 80, 253, 756, 1227, 1235, 1666
BfaI CTAG 1 cut(s) 1739
BfoI RGCGCY 1 cut(s) 192
BfuAI ACCTGC 1 cut(s) 1411
BisI GCNGC 6 cut(s) 161, 851, 883, 1495, 1588, 1719
BlsI GCNGC 6 cut(s) 162, 852, 884, 1496, 1589, 1720
Bme1390I CCNGG 5 cut(s) 182, 220, 401, 1079, 1693
Bme18I GGWCC 2 cut(s) 1400, 1711
BmeT110I CYCGRG 2 cut(s) 720, 1238
BmgBI CACGTC 1 cut(s) 829
BmgT120I GGNCC 2 cut(s) 1400, 1711
BmiI GGNNCC 3 cut(s) 178, 789, 815
BmrFI CCNGG 5 cut(s) 182, 220, 401, 1079, 1693
BmsI GCATC 3 cut(s) 406, 1030, 1381
BpiI GAAGAC 1 cut(s) 207
BpmI CTGGAG 2 cut(s) 553, 1251
Bpu10I CCTNAGC 2 cut(s) 657, 969
BpuEI CTTGAG 2 cut(s) 686, 865
BpuMI CCSGG 2 cut(s) 220, 401
BsaI GGTCTC 1 cut(s) 1227
BsaJI CCNNGG 4 cut(s) 180, 399, 719, 817
BsaWI WCCGGW 1 cut(s) 784
BsaXI ACNNNNNCTCC 4 cut(s) 254, 284, 763, 793
Bsc4I CCNNNNNNNGG 4 cut(s) 170, 209, 823, 892
Bse118I RCCGGY 2 cut(s) 885, 1742
Bse1I ACTGG 5 cut(s) 536, 1234, 1636, 1839, 1909
Bse3DI GCAATG 1 cut(s) 1429
BseBI CCWGG 3 cut(s) 182, 1079, 1693
BseDI CCNNGG 4 cut(s) 180, 399, 719, 817
BseGI GGATG 3 cut(s) 729, 979, 1284
BseLI CCNNNNNNNGG 4 cut(s) 170, 209, 823, 892
BseMI GCAATG 1 cut(s) 1429
BseMII CTCAG 6 cut(s) 671, 960, 1473, 1479, 1779, 1875
BseNI ACTGG 5 cut(s) 536, 1234, 1636, 1839, 1909
BseSI GKGCMC 3 cut(s) 784, 1343, 1851
BseX3I CGGCCG 2 cut(s) 161, 883
BseXI GCAGC 3 cut(s) 862, 1481, 1599
Bsh1236I CGCG 1 cut(s) 294
Bsh1285I CGRYCG 2 cut(s) 164, 886
BshFI GGCC 6 cut(s) 163, 885, 1181, 1635, 1737, 1838
BshNI GGYRCC 1 cut(s) 813
BsiEI CGRYCG 2 cut(s) 164, 886
BsiHKAI GWGCWC 3 cut(s) 413, 784, 1851
BsiHKCI CYCGRG 2 cut(s) 720, 1238
BsiSI CCGG 5 cut(s) 219, 401, 785, 886, 1743
BslFI GGGAC 2 cut(s) 917, 1535
BslI CCNNNNNNNGG 4 cut(s) 170, 209, 823, 892
BsmAI GTCTC 6 cut(s) 80, 253, 756, 1227, 1235, 1666
BsmBI CGTCTC 1 cut(s) 80
BsmFI GGGAC 2 cut(s) 917, 1535
BsmI GAATGC 4 cut(s) 331, 968, 1054, 1556
BsnI GGCC 6 cut(s) 163, 885, 1181, 1635, 1737, 1838
Bso31I GGTCTC 1 cut(s) 1227
BsoBI CYCGRG 2 cut(s) 720, 1238
Bsp1286I GDGCHC 5 cut(s) 413, 610, 784, 1343, 1851
Bsp143I GATC 8 cut(s) 289, 556, 787, 1091, 1210, 1679, 1772, 1791
BspACI CCGC 9 cut(s) 160, 294, 338, 362, 882, 1269, 1608, 1718, 1854
BspANI GGCC 6 cut(s) 163, 885, 1181, 1635, 1737, 1838
BspCNI CTCAG 6 cut(s) 670, 961, 1474, 1478, 1780, 1874
BspFNI CGCG 1 cut(s) 294
BspHI TCATGA 1 cut(s) 978
BspLI GGNNCC 3 cut(s) 178, 789, 815
BspMI ACCTGC 1 cut(s) 1411
BspPI GGATC 5 cut(s) 782, 795, 1099, 1205, 1687
BspQI GCTCTTC 1 cut(s) 369
BspT107I GGYRCC 1 cut(s) 813
BspTNI GGTCTC 1 cut(s) 1227
BsrBI CCGCTC 1 cut(s) 882
BsrDI GCAATG 1 cut(s) 1429
BsrFI RCCGGY 2 cut(s) 885, 1742
BsrI ACTGG 5 cut(s) 536, 1234, 1636, 1839, 1909
BssAI RCCGGY 2 cut(s) 885, 1742
BssECI CCNNGG 4 cut(s) 180, 399, 719, 817
BssMI GATC 8 cut(s) 289, 556, 787, 1091, 1210, 1679, 1772, 1791
BssNAI GTATAC 1 cut(s) 835
BssSI CACGAG 1 cut(s) 1095
BssT1I CCWWGG 1 cut(s) 817
Bst1107I GTATAC 1 cut(s) 835
Bst2BI CACGAG 1 cut(s) 1095
Bst2UI CCWGG 3 cut(s) 182, 1079, 1693
Bst4CI ACNGT 6 cut(s) 266, 744, 1171, 1355, 1526, 1829
Bst6I CTCTTC 4 cut(s) 369, 399, 692, 1321
BstAPI GCANNNNNTGC 3 cut(s) 963, 1412, 1816
BstC8I GCNNGC 6 cut(s) 69, 122, 1306, 1471, 1633, 1836
BstDEI CTNAG 6 cut(s) 657, 969, 1465, 1482, 1788, 1861
BstF5I GGATG 3 cut(s) 729, 979, 1284
BstFNI CGCG 1 cut(s) 294
BstH2I RGCGCY 1 cut(s) 192
BstHHI GCGC 4 cut(s) 126, 191, 968, 1561
BstKTI GATC 8 cut(s) 292, 559, 790, 1094, 1213, 1682, 1775, 1794
BstMAI GTCTC 6 cut(s) 80, 253, 756, 1227, 1235, 1666
BstMBI GATC 8 cut(s) 289, 556, 787, 1091, 1210, 1679, 1772, 1791
BstMCI CGRYCG 2 cut(s) 164, 886
BstNI CCWGG 3 cut(s) 182, 1079, 1693
BstNSI RCATGY 2 cut(s) 71, 1819
BstSCI CCNGG 5 cut(s) 180, 218, 399, 1077, 1691
BstSLI GKGCMC 3 cut(s) 784, 1343, 1851
BstUI CGCG 1 cut(s) 294
BstV1I GCAGC 3 cut(s) 862, 1481, 1599
BstV2I GAAGAC 1 cut(s) 207
BstX2I RGATCY 2 cut(s) 787, 1091
BstYI RGATCY 2 cut(s) 787, 1091
BstZ17I GTATAC 1 cut(s) 835
BstZI CGGCCG 2 cut(s) 161, 883
BsuRI GGCC 6 cut(s) 163, 885, 1181, 1635, 1737, 1838
BtgZI GCGATG 2 cut(s) 1386, 1404
BtrI CACGTC 1 cut(s) 829
BtsCI GGATG 3 cut(s) 729, 979, 1284
BtsI GCAGTG 1 cut(s) 1059
BtsIMutI CAGTG 4 cut(s) 262, 749, 1059, 1580
BveI ACCTGC 1 cut(s) 1411
Cac8I GCNNGC 6 cut(s) 69, 122, 1306, 1471, 1633, 1836
CciI TCATGA 1 cut(s) 978
CfoI GCGC 4 cut(s) 126, 191, 968, 1561
Cfr10I RCCGGY 2 cut(s) 885, 1742
Cfr13I GGNCC 2 cut(s) 1400, 1711
Csp6I GTAC 2 cut(s) 814, 1612
CspCI CAANNNNNGTGG 2 cut(s) 60, 95
CviQI GTAC 2 cut(s) 814, 1612
DdeI CTNAG 6 cut(s) 657, 969, 1465, 1482, 1788, 1861
DpnI GATC 8 cut(s) 291, 558, 789, 1093, 1212, 1681, 1774, 1793
DpnII GATC 8 cut(s) 289, 556, 787, 1091, 1210, 1679, 1772, 1791
EaeI YGGCCR 2 cut(s) 161, 883
EagI CGGCCG 2 cut(s) 161, 883
Eam1104I CTCTTC 4 cut(s) 369, 399, 692, 1321
EarI CTCTTC 4 cut(s) 369, 399, 692, 1321
EciI GGCGGA 1 cut(s) 377
EclXI CGGCCG 2 cut(s) 161, 883
Eco130I CCWWGG 1 cut(s) 817
Eco147I AGGCCT 1 cut(s) 1181
Eco24I GRGCYC 1 cut(s) 610
Eco31I GGTCTC 1 cut(s) 1227
Eco47I GGWCC 2 cut(s) 1400, 1711
Eco52I CGGCCG 2 cut(s) 161, 883
Eco57I CTGAAG 1 cut(s) 1053
Eco88I CYCGRG 2 cut(s) 720, 1238
EcoRI GAATTC 1 cut(s) 444
EcoRII CCWGG 3 cut(s) 180, 1077, 1691
EcoT14I CCWWGG 1 cut(s) 817
EcoT22I ATGCAT 1 cut(s) 761
EcoT38I GRGCYC 1 cut(s) 610
ErhI CCWWGG 1 cut(s) 817
Esp3I CGTCTC 1 cut(s) 80
FaqI GGGAC 2 cut(s) 917, 1535
FauI CCCGC 2 cut(s) 331, 1601
FblI GTMKAC 1 cut(s) 834
Fnu4HI GCNGC 6 cut(s) 161, 851, 883, 1495, 1588, 1719
FokI GGATG 3 cut(s) 716, 986, 1271
FriOI GRGCYC 1 cut(s) 610
Fsp4HI GCNGC 6 cut(s) 161, 851, 883, 1495, 1588, 1719
FspBI CTAG 1 cut(s) 1739
GlaI GCGC 4 cut(s) 125, 190, 967, 1560
GluI GCNGC 6 cut(s) 161, 851, 883, 1495, 1588, 1719
GsuI CTGGAG 2 cut(s) 553, 1251
HaeII RGCGCY 1 cut(s) 192
HaeIII GGCC 6 cut(s) 163, 885, 1181, 1635, 1737, 1838
HapII CCGG 5 cut(s) 219, 401, 785, 886, 1743
HhaI GCGC 4 cut(s) 126, 191, 968, 1561
Hin6I GCGC 4 cut(s) 124, 189, 966, 1559
HinP1I GCGC 4 cut(s) 124, 189, 966, 1559
HincII GTYRAC 1 cut(s) 1003
HindII GTYRAC 1 cut(s) 1003
HindIII AAGCTT 2 cut(s) 228, 468
HinfI GANTC 5 cut(s) 395, 539, 1442, 1784, 1859
HpaII CCGG 5 cut(s) 219, 401, 785, 886, 1743
HphI GGTGA 4 cut(s) 251, 488, 532, 1112
Hpy166II GTNNAC 6 cut(s) 782, 835, 1003, 1351, 1505, 1849
Hpy188I TCNGA 5 cut(s) 929, 1441, 1483, 1789, 1864
Hpy8I GTNNAC 6 cut(s) 782, 835, 1003, 1351, 1505, 1849
Hpy99I CGWCG 2 cut(s) 140, 599
HpyAV CCTTC 5 cut(s) 310, 481, 803, 817, 1642
HpyCH4III ACNGT 6 cut(s) 266, 744, 1171, 1355, 1526, 1829
HpyCH4IV ACGT 1 cut(s) 828
HpyF3I CTNAG 6 cut(s) 657, 969, 1465, 1482, 1788, 1861
HpySE526I ACGT 1 cut(s) 828
HspAI GCGC 4 cut(s) 124, 189, 966, 1559
KpnI GGTACC 1 cut(s) 817
Kzo9I GATC 8 cut(s) 289, 556, 787, 1091, 1210, 1679, 1772, 1791
LguI GCTCTTC 1 cut(s) 369
LmnI GCTCC 5 cut(s) 140, 182, 275, 341, 1651
Lsp1109I GCAGC 3 cut(s) 862, 1481, 1599
LweI GCATC 3 cut(s) 406, 1030, 1381
MaeI CTAG 1 cut(s) 1739
MaeII ACGT 1 cut(s) 828
MaeIII GTNAC 7 cut(s) 239, 425, 650, 677, 910, 1105, 1745
MalI GATC 8 cut(s) 291, 558, 789, 1093, 1212, 1681, 1774, 1793
MbiI CCGCTC 1 cut(s) 882
MboI GATC 8 cut(s) 289, 556, 787, 1091, 1210, 1679, 1772, 1791
MflI RGATCY 2 cut(s) 787, 1091
MhlI GDGCHC 5 cut(s) 413, 610, 784, 1343, 1851
MluCI AATT 5 cut(s) 151, 444, 640, 1154, 1477
MlyI GAGTC 3 cut(s) 548, 1778, 1853
MmeI TCCRAC 1 cut(s) 1063
Mph1103I ATGCAT 1 cut(s) 761
MseI TTAA 6 cut(s) 99, 383, 497, 1131, 1197, 1700
MslI CAYNNNNRTG 2 cut(s) 66, 1533
MspA1I CMGCKG 1 cut(s) 1590
MspI CCGG 5 cut(s) 219, 401, 785, 886, 1743
MspR9I CCNGG 5 cut(s) 182, 220, 401, 1079, 1693
Mva1269I GAATGC 4 cut(s) 331, 968, 1054, 1556
MvaI CCWGG 3 cut(s) 182, 1079, 1693
MvnI CGCG 1 cut(s) 294
NciI CCSGG 2 cut(s) 220, 401
NdeII GATC 8 cut(s) 289, 556, 787, 1091, 1210, 1679, 1772, 1791
NlaIV GGNNCC 3 cut(s) 178, 789, 815
NmeAIII GCCGAG 1 cut(s) 1069
NmuCI GTSAC 3 cut(s) 239, 650, 910
NsiI ATGCAT 1 cut(s) 761
NspI RCATGY 2 cut(s) 71, 1819
PaeI GCATGC 1 cut(s) 71
PaeR7I CTCGAG 1 cut(s) 1238
PagI TCATGA 1 cut(s) 978
PceI AGGCCT 1 cut(s) 1181
PciSI GCTCTTC 1 cut(s) 369
PcsI WCGNNNNNNNCGW 2 cut(s) 834, 1093
PctI GAATGC 4 cut(s) 331, 968, 1054, 1556
PfeI GAWTC 2 cut(s) 395, 1442
PflFI GACNNNGTC 1 cut(s) 264
PkrI GCNGC 6 cut(s) 162, 852, 884, 1496, 1589, 1720
PleI GAGTC 3 cut(s) 547, 1778, 1853
PpsI GAGTC 3 cut(s) 547, 1778, 1853
Psp6I CCWGG 3 cut(s) 180, 1077, 1691
PspGI CCWGG 3 cut(s) 180, 1077, 1691
PspN4I GGNNCC 3 cut(s) 178, 789, 815
PspPI GGNCC 2 cut(s) 1400, 1711
PsuI RGATCY 2 cut(s) 787, 1091
PsyI GACNNNGTC 1 cut(s) 264
PvuII CAGCTG 1 cut(s) 1590
RsaI GTAC 2 cut(s) 815, 1613
RsaNI GTAC 2 cut(s) 814, 1612
RseI CAYNNNNRTG 2 cut(s) 66, 1533
SapI GCTCTTC 1 cut(s) 369
SaqAI TTAA 6 cut(s) 99, 383, 497, 1131, 1197, 1700
SatI GCNGC 6 cut(s) 161, 851, 883, 1495, 1588, 1719
Sau3AI GATC 8 cut(s) 289, 556, 787, 1091, 1210, 1679, 1772, 1791
Sau96I GGNCC 2 cut(s) 1400, 1711
SchI GAGTC 3 cut(s) 548, 1778, 1853
ScrFI CCNGG 5 cut(s) 182, 220, 401, 1079, 1693
SduI GDGCHC 5 cut(s) 413, 610, 784, 1343, 1851
SfaNI GCATC 3 cut(s) 406, 1030, 1381
Sfr274I CTCGAG 1 cut(s) 1238
SinI GGWCC 2 cut(s) 1400, 1711
SlaI CTCGAG 1 cut(s) 1238
SmiMI CAYNNNNRTG 2 cut(s) 66, 1533
SmlI CTYRAG 3 cut(s) 665, 844, 1238
SmoI CTYRAG 3 cut(s) 665, 844, 1238
SphI GCATGC 1 cut(s) 71
Sse9I AATT 5 cut(s) 151, 444, 640, 1154, 1477
SseBI AGGCCT 1 cut(s) 1181
SsiI CCGC 9 cut(s) 160, 294, 338, 362, 882, 1269, 1608, 1718, 1854
SspMI CTAG 1 cut(s) 1739
StuI AGGCCT 1 cut(s) 1181
StyD4I CCNGG 5 cut(s) 180, 218, 399, 1077, 1691
StyI CCWWGG 1 cut(s) 817
TaaI ACNGT 6 cut(s) 266, 744, 1171, 1355, 1526, 1829
TaiI ACGT 1 cut(s) 831
TaqI TCGA 5 cut(s) 128, 257, 1147, 1239, 1771
TasI AATT 5 cut(s) 151, 444, 640, 1154, 1477
TauI GCSGC 3 cut(s) 163, 885, 1721
TfiI GAWTC 2 cut(s) 395, 1442
Tru1I TTAA 6 cut(s) 99, 383, 497, 1131, 1197, 1700
Tru9I TTAA 6 cut(s) 99, 383, 497, 1131, 1197, 1700
TscAI CASTG 4 cut(s) 269, 749, 1059, 1580
TseFI GTSAC 3 cut(s) 239, 650, 910
TseI GCWGC 3 cut(s) 850, 1494, 1587
Tsp45I GTSAC 3 cut(s) 239, 650, 910
TspDTI ATGAA 6 cut(s) 718, 953, 995, 1563, 1661, 1696
TspGWI ACGGA 3 cut(s) 104, 153, 532
TspRI CASTG 4 cut(s) 269, 749, 1059, 1580
Tth111I GACNNNGTC 1 cut(s) 264
VneI GTGCAC 2 cut(s) 780, 1847
VpaK11BI GGWCC 2 cut(s) 1400, 1711
XapI RAATTY 3 cut(s) 444, 640, 1477
XceI RCATGY 2 cut(s) 71, 1819
XhoI CTCGAG 1 cut(s) 1238
XmiI GTMKAC 1 cut(s) 834
XspI CTAG 1 cut(s) 1739
Zsp2I ATGCAT 1 cut(s) 761
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.