Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0007727

Physical Location & Seq

Genomic Coordinates Reverse (-)

7870938 .. 7876565

Gene Structure 5628 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g13190.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGGATTTGTTATCGAAGTTTACGTTTATATTTGCGGTGTTGGCTGTTCTTGAACACCATGTTGGTGTTTATGGAAGGTTTGTGGTGGAGACTGGTAGTATTAAAGTTCTGTATCCAATGGCTCTGAGGGGTAAGCGTGATGGTGCTATTGGAAACTTTGGTCTGCCGGACTATGGAGGCTCCTTGGTGGGTTCTGTGGTATACCCTGAGAAAGGGTCTACTGGGTGTGAAGCTTTTGAGGGTGATAAGCCTTTCAGGTCTCGGATGTCTCGCCCCACTATTCTTGTTCTTGATCGTGGAGGTTGCTACTTTGCTTTGAAGGTGTGGAATGCTCAAGAGGCAGGAGCTACTGCCGTTTTAGTGGCTGACAATGTTGAAGAGCCTCTAATTACAATGGACTCCCCAGAGGAGAGCACTGATGCAGATGGTTACATTGAGAAGATTGGAATTCCATCAGCTTTGATAGAGAAATCATTTGGTGACAGCTTGAAGGATGCTGTGAAGAACAATGAAGATGTTGTGGTGAAACTGGACTGGAGAGAGTCAGTTCCCCACCCTGATCAAAGAGTTGAGTATGAGTTCTGGACAAACAGCAATGATGAATGCGGGGCTCGCTGTGATGAGCAAATGAATTTTGTGAAAAATTTCAAGGGTCATGCTCAGATTCTAGAGAAAGGGGGTTACACCCTTTTCACTCCACACTACATAACTTGGTATTGCCCTCAGGCTTTTGTCCTTACCGCTCAATGCAAGTCTCAATGCATAAACCGGGGGAGGTACTGTGCCCCAGATCCGGAGAAAGATTTCGGAGAAGGGTACCAAGGGAAGGATGTGGTATTTGAGAACTTGAGGCAGCTATGTGTGCATAGAGTTGCCAATGAGAGCAACCGGTCATGGGTCTGGTGGGATTATGTGACAGACTTCCATATCAGATGTTCCATGAAAGAAAAGCGTTACAGCAAAGAATGCGCTGAGGATGTCATGAAATCACTTGATTTGCCTATTGAAAAGATTAAAAAATGCATGGGCAACCCTGAAGATGATGTGGAGAATGAAGTGCTTAAAGCTGAACAAGAAGTCCAGGTTGGTCGAGGATCTCGTGGTGATGTTACCATCTTGCCAACATTGGTGATTAATAATGTTCAATATCGAGGAAAACTGGAACGAAATGGTGTCCTAAAGGCGCTGTGTGCTGGATTCAAGGAGACAACTGAACCTCGAATTTGTTTGAATGGAGATCTTGAAACTAATGAGTGTCTAGAGAGAAATGGTGGCTGTTGGCTAGACAACCGGGGTAATCTAACTGCTTGCAAGGACACATTCCGGGGAAGAGTTTGCGAGTGCCCTGTAGTGGATGGTGTTCAATATAAAGGCGATGGTTATACATCTTGTGCTGCTTTTGGGCCAGCAAGGTGCGCAATAGACAATGGAGGTTGCTGGTCAGAATCTAGAAATGGAGTAACTATATCAGCTTGCTCAAATACCGAGTTATCTGGCTGCAAGTGTCCGCAAGGATTTAAAGGGGATGGTCATCATTGTGAAGATATCGATGAATGCAAGGAACGTAGTGCTTGTCAGTGTGATGGCTGCAGCTGTAAGAACACTTGGGGTGGATACAACTGCAAATGTAAGGGAGGACATCTTTATATAAAGGAGCAAGATACTTGTATTGAGAGACAAGGATCGAGATTTGCATGGTTCATAACATCCATTGTTCTTGCAGCTGTGGCCGGAGTCGGCTTGGGTGGTTACATATTCTACAAATACAGGCTTCGATCTTACATGGACTCAGAAATCATGGCTATCATGTCACAATACATGCCTCTAGACAGCCAACAGGCCAATCAAGTCCATACTGCCGAGGTAGAACCTCTACGTCAAGGCTCAGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PA cEGF

Protein Analysis

631

Amino Acids

70.17

Weight (kDa)

5.36

Isoelectric Point (pI)

38.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PA	PF02225	64 - 163	1.5e-15	PA domain
VSR_TRX	PF25011	190 - 397	1e-102	Vacuolar sorting receptor thioredoxin-like domain
cEGF	PF12662	500 - 518	1.1e-06	Complement Clr-like EGF-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007727)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30900 AT2G34940 AT4G20110 AT4G20110
fragaria_vesca	FvH4_3g13190 FvH4_3g13190
malus_domestica	MD05G1244500.v1.1 MD10G1226100.v1.1
prunus_persica	Prupe.4G119200_v2.0.a1 Prupe.4G119200_v2.0.a1 Prupe.4G119200_v2.0.a1
pyrus_communis	pycom05g22100 pycom10g19000
rosa_chinensis	RchiOBHm_Chr5g0021401
rosa_laevigata	RLG00000032610
rosa_multiflora	Rmu_co8489967.1_g000001 Rmu_sc0004847.1_g000021
rosa_roxburghii	Rroxscaffold_1G00057140
rosa_rugosa	Rorug05G0067000
rosa_samantha	Rh5AG156100 Rh5BG155600 Rh5CG169300 Rh5DG156100
rosa_wichuraiana	Rw5G013900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1417
Acc65I	GGTACC	1 cut(s)	816
AccB1I	GGYRCC	1 cut(s)	816
AccBSI	CCGCTC	1 cut(s)	743
AccI	GTMKAC	2 cut(s)	201, 218
AccIII	TCCGGA	1 cut(s)	793
AciI	CCGC	4 cut(s)	35, 606, 741, 1508
AclWI	GGATC	3 cut(s)	785, 1102, 1690
AcoI	YGGCCR	1 cut(s)	1728
AcsI	RAATTY	4 cut(s)	447, 631, 643, 1221
AcuI	CTGAAG	1 cut(s)	1056
AfaI	GTAC	2 cut(s)	779, 818
AfiI	CCNNNNNNNGG	6 cut(s)	173, 212, 793, 826, 895, 1351
AgeI	ACCGGT	1 cut(s)	888
AjnI	CCWGG	1 cut(s)	1080
AjuI	GAANNNNNNNTTGG	4 cut(s)	45, 77, 1068, 1100
AloI	GAACNNNNNNTCC	2 cut(s)	1062, 1094
AluBI	AGCT	9 cut(s)	233, 347, 458, 486, 856, 1067, 1472, 1593, 1724
AluI	AGCT	9 cut(s)	233, 347, 458, 486, 856, 1067, 1472, 1593, 1724
Alw21I	GWGCWC	1 cut(s)	416
Alw26I	GTCTC	6 cut(s)	83, 264, 273, 759, 1199, 1669
AlwI	GGATC	3 cut(s)	785, 1102, 1690
Aor13HI	TCCGGA	1 cut(s)	793
AoxI	GGCC	3 cut(s)	1403, 1728, 1839
ApeKI	GCWGC	6 cut(s)	853, 1394, 1497, 1587, 1590, 1721
ApoI	RAATTY	4 cut(s)	447, 631, 643, 1221
AseI	ATTAAT	1 cut(s)	1134
AsiGI	ACCGGT	1 cut(s)	888
Asp700I	GAANNNNTTC	2 cut(s)	644, 803
Asp718I	GGTACC	1 cut(s)	816
AspLEI	GCGC	3 cut(s)	971, 1186, 1418
AspS9I	GGNCC	1 cut(s)	1403
AsuC2I	CCSGG	3 cut(s)	770, 1292, 1325
AsuHPI	GGTGA	5 cut(s)	254, 491, 535, 1115, 1141
AxyI	CCTNAGG	1 cut(s)	723
BaeGI	GKGCMC	2 cut(s)	787, 1346
BanI	GGYRCC	1 cut(s)	816
BanII	GRGCYC	1 cut(s)	613
BauI	CACGAG	1 cut(s)	1098
Bbv12I	GWGCWC	1 cut(s)	416
BbvCI	CCTCAGC	1 cut(s)	972
BbvI	GCAGC	6 cut(s)	865, 1381, 1484, 1574, 1602, 1733
BccI	CCATC	8 cut(s)	134, 419, 460, 1121, 1349, 1370, 1520, 1577
BceAI	ACGGC	1 cut(s)	338
BciT130I	CCWGG	1 cut(s)	1082
BciVI	GTATCC	2 cut(s)	123, 1607
BclI	TGATCA	1 cut(s)	559
BcnI	CCSGG	3 cut(s)	770, 1292, 1325
BcoDI	GTCTC	6 cut(s)	83, 264, 273, 759, 1199, 1669
BfaI	CTAG	5 cut(s)	668, 1259, 1283, 1449, 1826
BfmI	CTRYAG	2 cut(s)	1347, 1588
BfoI	RGCGCY	1 cut(s)	1187
BfuI	GTATCC	2 cut(s)	123, 1607
BglII	AGATCT	1 cut(s)	1237
BisI	GCNGC	6 cut(s)	854, 1395, 1498, 1588, 1591, 1722
BlsI	GCNGC	6 cut(s)	855, 1396, 1499, 1589, 1592, 1723
Bme1390I	CCNGG	4 cut(s)	770, 1082, 1292, 1325
BmgT120I	GGNCC	1 cut(s)	1403
BmiI	GGNNCC	2 cut(s)	181, 818
BmrFI	CCNGG	4 cut(s)	770, 1082, 1292, 1325
BmrI	ACTGGG	1 cut(s)	231
BmsI	GCATC	2 cut(s)	409, 484
BmuI	ACTGGG	1 cut(s)	231
BpmI	CTGGAG	1 cut(s)	556
Bpu10I	CCTNAGC	1 cut(s)	972
BpuEI	CTTGAG	2 cut(s)	318, 868
BpuMI	CCSGG	3 cut(s)	770, 1292, 1325
Bsa29I	ATCGAT	1 cut(s)	1548
BsaBI	GATNNNNATC	1 cut(s)	1530
BsaI	GGTCTC	1 cut(s)	264
BsaJI	CCNNGG	6 cut(s)	183, 769, 820, 1291, 1324, 1860
BsaWI	WCCGGW	2 cut(s)	793, 888
BsaXI	ACNNNNNCTCC	2 cut(s)	766, 796
Bsc4I	CCNNNNNNNGG	6 cut(s)	173, 212, 793, 826, 895, 1351
Bse118I	RCCGGY	1 cut(s)	888
Bse1I	ACTGG	5 cut(s)	97, 226, 534, 539, 1164
Bse21I	CCTNAGG	1 cut(s)	723
Bse3DI	GCAATG	1 cut(s)	601
Bse8I	GATNNNNATC	1 cut(s)	1530
BseAI	TCCGGA	1 cut(s)	793
BseBI	CCWGG	1 cut(s)	1082
BseCI	ATCGAT	1 cut(s)	1548
BseDI	CCNNGG	6 cut(s)	183, 769, 820, 1291, 1324, 1860
BseGI	GGATG	7 cut(s)	270, 499, 835, 982, 1360, 1531, 1706
BseJI	GATNNNNATC	1 cut(s)	1530
BseLI	CCNNNNNNNGG	6 cut(s)	173, 212, 793, 826, 895, 1351
BseMI	GCAATG	1 cut(s)	601
BseMII	CTCAG	6 cut(s)	116, 198, 674, 737, 963, 1803
BseNI	ACTGG	5 cut(s)	97, 226, 534, 539, 1164
BseRI	GAGGAG	1 cut(s)	422
BseSI	GKGCMC	2 cut(s)	787, 1346
BseXI	GCAGC	6 cut(s)	865, 1381, 1484, 1574, 1602, 1733
BshFI	GGCC	3 cut(s)	1405, 1730, 1841
BshNI	GGYRCC	1 cut(s)	816
BshTI	ACCGGT	1 cut(s)	888
BshVI	ATCGAT	1 cut(s)	1548
BsiHKAI	GWGCWC	1 cut(s)	416
BsiSI	CCGG	7 cut(s)	167, 769, 794, 889, 1291, 1324, 1731
BslI	CCNNNNNNNGG	6 cut(s)	173, 212, 793, 826, 895, 1351
BsmAI	GTCTC	6 cut(s)	83, 264, 273, 759, 1199, 1669
BsmI	GAATGC	4 cut(s)	334, 608, 971, 1559
BsnI	GGCC	3 cut(s)	1405, 1730, 1841
Bso31I	GGTCTC	1 cut(s)	264
Bsp1286I	GDGCHC	4 cut(s)	416, 613, 787, 1346
Bsp13I	TCCGGA	1 cut(s)	793
Bsp143I	GATC	7 cut(s)	292, 559, 790, 1094, 1237, 1682, 1775
BspACI	CCGC	4 cut(s)	35, 606, 741, 1508
BspANI	GGCC	3 cut(s)	1405, 1730, 1841
BspCNI	CTCAG	6 cut(s)	117, 199, 673, 736, 964, 1802
BspDI	ATCGAT	1 cut(s)	1548
BspEI	TCCGGA	1 cut(s)	793
BspHI	TCATGA	1 cut(s)	981
BspLI	GGNNCC	2 cut(s)	181, 818
BspMAI	CTGCAG	1 cut(s)	1592
BspPI	GGATC	3 cut(s)	785, 1102, 1690
BspQI	GCTCTTC	1 cut(s)	372
BspT107I	GGYRCC	1 cut(s)	816
BspTNI	GGTCTC	1 cut(s)	264
BsrBI	CCGCTC	1 cut(s)	743
BsrDI	GCAATG	1 cut(s)	601
BsrFI	RCCGGY	1 cut(s)	888
BsrI	ACTGG	5 cut(s)	97, 226, 534, 539, 1164
BssAI	RCCGGY	1 cut(s)	888
BssECI	CCNNGG	6 cut(s)	183, 769, 820, 1291, 1324, 1860
BssMI	GATC	7 cut(s)	292, 559, 790, 1094, 1237, 1682, 1775
BssNAI	GTATAC	1 cut(s)	202
BssSI	CACGAG	1 cut(s)	1098
BssT1I	CCWWGG	2 cut(s)	183, 820
Bst1107I	GTATAC	1 cut(s)	202
Bst2BI	CACGAG	1 cut(s)	1098
Bst2UI	CCWGG	1 cut(s)	1082
Bst4CI	ACNGT	1 cut(s)	782
Bst6I	CTCTTC	2 cut(s)	372, 1324
BstAPI	GCANNNNNTGC	1 cut(s)	966
BstC8I	GCNNGC	4 cut(s)	613, 1309, 1407, 1474
BstDEI	CTNAG	7 cut(s)	125, 207, 660, 723, 972, 1789, 1885
BstENI	CCTNNNNNAGG	1 cut(s)	210
BstF5I	GGATG	7 cut(s)	270, 499, 835, 982, 1360, 1531, 1706
BstH2I	RGCGCY	1 cut(s)	1187
BstHHI	GCGC	3 cut(s)	971, 1186, 1418
BstKTI	GATC	7 cut(s)	295, 562, 793, 1097, 1240, 1685, 1778
BstMAI	GTCTC	6 cut(s)	83, 264, 273, 759, 1199, 1669
BstMBI	GATC	7 cut(s)	292, 559, 790, 1094, 1237, 1682, 1775
BstMWI	GCNNNNNNNGC	8 cut(s)	41, 338, 612, 862, 966, 1190, 1415, 1727
BstNI	CCWGG	1 cut(s)	1082
BstNSI	RCATGY	1 cut(s)	1822
BstSCI	CCNGG	4 cut(s)	768, 1080, 1290, 1323
BstSFI	CTRYAG	2 cut(s)	1347, 1588
BstSLI	GKGCMC	2 cut(s)	787, 1346
BstV1I	GCAGC	6 cut(s)	865, 1381, 1484, 1574, 1602, 1733
BstX2I	RGATCY	3 cut(s)	790, 1094, 1237
BstYI	RGATCY	3 cut(s)	790, 1094, 1237
BstZ17I	GTATAC	1 cut(s)	202
Bsu15I	ATCGAT	1 cut(s)	1548
Bsu36I	CCTNAGG	1 cut(s)	723
BsuI	GTATCC	2 cut(s)	123, 1607
BsuRI	GGCC	3 cut(s)	1405, 1730, 1841
BsuTUI	ATCGAT	1 cut(s)	1548
BtgZI	GCGATG	1 cut(s)	1389
BtsCI	GGATG	7 cut(s)	270, 499, 835, 982, 1360, 1531, 1706
BtsIMutI	CAGTG	2 cut(s)	414, 1583
Cac8I	GCNNGC	4 cut(s)	613, 1309, 1407, 1474
CciI	TCATGA	1 cut(s)	981
CfoI	GCGC	3 cut(s)	971, 1186, 1418
Cfr10I	RCCGGY	1 cut(s)	888
Cfr13I	GGNCC	1 cut(s)	1403
ClaI	ATCGAT	1 cut(s)	1548
Csp6I	GTAC	2 cut(s)	778, 817
CspAI	ACCGGT	1 cut(s)	888
CspCI	CAANNNNNGTGG	2 cut(s)	265, 300
CviQI	GTAC	2 cut(s)	778, 817
DdeI	CTNAG	7 cut(s)	125, 207, 660, 723, 972, 1789, 1885
DpnI	GATC	7 cut(s)	294, 561, 792, 1096, 1239, 1684, 1777
DpnII	GATC	7 cut(s)	292, 559, 790, 1094, 1237, 1682, 1775
DraI	TTTAAA	1 cut(s)	1519
EaeI	YGGCCR	1 cut(s)	1728
Eam1104I	CTCTTC	2 cut(s)	372, 1324
EarI	CTCTTC	2 cut(s)	372, 1324
Eco130I	CCWWGG	2 cut(s)	183, 820
Eco24I	GRGCYC	1 cut(s)	613
Eco31I	GGTCTC	1 cut(s)	264
Eco32I	GATATC	1 cut(s)	1546
Eco57I	CTGAAG	1 cut(s)	1056
Eco81I	CCTNAGG	1 cut(s)	723
EcoNI	CCTNNNNNAGG	1 cut(s)	210
EcoRI	GAATTC	1 cut(s)	447
EcoRII	CCWGG	1 cut(s)	1080
EcoRV	GATATC	1 cut(s)	1546
EcoT14I	CCWWGG	2 cut(s)	183, 820
EcoT22I	ATGCAT	2 cut(s)	764, 1025
EcoT38I	GRGCYC	1 cut(s)	613
ErhI	CCWWGG	2 cut(s)	183, 820
FauI	CCCGC	1 cut(s)	599
FbaI	TGATCA	1 cut(s)	559
FblI	GTMKAC	2 cut(s)	201, 218
Fnu4HI	GCNGC	6 cut(s)	854, 1395, 1498, 1588, 1591, 1722
FokI	GGATG	7 cut(s)	277, 506, 842, 989, 1367, 1538, 1693
FriOI	GRGCYC	1 cut(s)	613
Fsp4HI	GCNGC	6 cut(s)	854, 1395, 1498, 1588, 1591, 1722
FspBI	CTAG	5 cut(s)	668, 1259, 1283, 1449, 1826
FspI	TGCGCA	1 cut(s)	1417
GlaI	GCGC	3 cut(s)	970, 1185, 1417
GluI	GCNGC	6 cut(s)	854, 1395, 1498, 1588, 1591, 1722
GsuI	CTGGAG	1 cut(s)	556
HaeII	RGCGCY	1 cut(s)	1187
HaeIII	GGCC	3 cut(s)	1405, 1730, 1841
HapII	CCGG	7 cut(s)	167, 769, 794, 889, 1291, 1324, 1731
HhaI	GCGC	3 cut(s)	971, 1186, 1418
Hin6I	GCGC	3 cut(s)	969, 1184, 1416
HinP1I	GCGC	3 cut(s)	969, 1184, 1416
HindIII	AAGCTT	1 cut(s)	231
HinfI	GANTC	7 cut(s)	398, 542, 664, 1197, 1445, 1734, 1787
HpaII	CCGG	7 cut(s)	167, 769, 794, 889, 1291, 1324, 1731
HphI	GGTGA	5 cut(s)	254, 491, 535, 1115, 1141
Hpy166II	GTNNAC	3 cut(s)	21, 202, 219
Hpy188I	TCNGA	7 cut(s)	126, 264, 663, 809, 932, 1444, 1792
Hpy8I	GTNNAC	3 cut(s)	21, 202, 219
HpyAV	CCTTC	5 cut(s)	69, 313, 484, 806, 820
HpyCH4III	ACNGT	1 cut(s)	782
HpyCH4IV	ACGT	3 cut(s)	23, 1564, 1876
HpyF10VI	GCNNNNNNNGC	8 cut(s)	41, 338, 612, 862, 966, 1190, 1415, 1727
HpyF3I	CTNAG	7 cut(s)	125, 207, 660, 723, 972, 1789, 1885
HpySE526I	ACGT	3 cut(s)	23, 1564, 1876
HspAI	GCGC	3 cut(s)	969, 1184, 1416
Kpn2I	TCCGGA	1 cut(s)	793
KpnI	GGTACC	1 cut(s)	820
Ksp22I	TGATCA	1 cut(s)	559
Kzo9I	GATC	7 cut(s)	292, 559, 790, 1094, 1237, 1682, 1775
LguI	GCTCTTC	1 cut(s)	372
LmnI	GCTCC	3 cut(s)	185, 344, 1654
Lsp1109I	GCAGC	6 cut(s)	865, 1381, 1484, 1574, 1602, 1733
LweI	GCATC	2 cut(s)	409, 484
MaeI	CTAG	5 cut(s)	668, 1259, 1283, 1449, 1826
MaeII	ACGT	3 cut(s)	23, 1564, 1876
MaeIII	GTNAC	9 cut(s)	428, 479, 680, 913, 953, 1108, 1459, 1748, 1809
MalI	GATC	7 cut(s)	294, 561, 792, 1096, 1239, 1684, 1777
MbiI	CCGCTC	1 cut(s)	743
MboI	GATC	7 cut(s)	292, 559, 790, 1094, 1237, 1682, 1775
MboII	GAAGA	7 cut(s)	389, 451, 514, 524, 1049, 1341, 1553
MflI	RGATCY	3 cut(s)	790, 1094, 1237
MhlI	GDGCHC	4 cut(s)	416, 613, 787, 1346
MluCI	AATT	5 cut(s)	387, 447, 631, 643, 1221
MlyI	GAGTC	4 cut(s)	392, 551, 1743, 1781
Mph1103I	ATGCAT	2 cut(s)	764, 1025
MroI	TCCGGA	1 cut(s)	793
MroXI	GAANNNNTTC	2 cut(s)	644, 803
MseI	TTAA	5 cut(s)	102, 1014, 1062, 1134, 1518
MslI	CAYNNNNRTG	2 cut(s)	63, 1536
MspA1I	CMGCKG	2 cut(s)	1593, 1724
MspI	CCGG	7 cut(s)	167, 769, 794, 889, 1291, 1324, 1731
MspR9I	CCNGG	4 cut(s)	770, 1082, 1292, 1325
Mva1269I	GAATGC	4 cut(s)	334, 608, 971, 1559
MvaI	CCWGG	1 cut(s)	1082
MwoI	GCNNNNNNNGC	8 cut(s)	41, 338, 612, 862, 966, 1190, 1415, 1727
NciI	CCSGG	3 cut(s)	770, 1292, 1325
NdeII	GATC	7 cut(s)	292, 559, 790, 1094, 1237, 1682, 1775
NlaIV	GGNNCC	2 cut(s)	181, 818
NmeAIII	GCCGAG	1 cut(s)	1885
NmuCI	GTSAC	3 cut(s)	479, 913, 1809
NsbI	TGCGCA	1 cut(s)	1417
NsiI	ATGCAT	2 cut(s)	764, 1025
NspI	RCATGY	1 cut(s)	1822
PagI	TCATGA	1 cut(s)	981
PciSI	GCTCTTC	1 cut(s)	372
PcsI	WCGNNNNNNNCGW	2 cut(s)	20, 1096
PctI	GAATGC	4 cut(s)	334, 608, 971, 1559
PdmI	GAANNNNTTC	2 cut(s)	644, 803
PfeI	GAWTC	3 cut(s)	664, 1197, 1445
PinAI	ACCGGT	1 cut(s)	888
PkrI	GCNGC	6 cut(s)	855, 1396, 1499, 1589, 1592, 1723
PleI	GAGTC	4 cut(s)	392, 550, 1742, 1781
PpsI	GAGTC	4 cut(s)	392, 550, 1742, 1781
PshBI	ATTAAT	1 cut(s)	1134
Psp6I	CCWGG	1 cut(s)	1080
PspGI	CCWGG	1 cut(s)	1080
PspN4I	GGNNCC	2 cut(s)	181, 818
PspPI	GGNCC	1 cut(s)	1403
PstI	CTGCAG	1 cut(s)	1592
PsuI	RGATCY	3 cut(s)	790, 1094, 1237
PvuII	CAGCTG	2 cut(s)	1593, 1724
RsaI	GTAC	2 cut(s)	779, 818
RsaNI	GTAC	2 cut(s)	778, 817
RseI	CAYNNNNRTG	2 cut(s)	63, 1536
SapI	GCTCTTC	1 cut(s)	372
SaqAI	TTAA	5 cut(s)	102, 1014, 1062, 1134, 1518
SatI	GCNGC	6 cut(s)	854, 1395, 1498, 1588, 1591, 1722
Sau3AI	GATC	7 cut(s)	292, 559, 790, 1094, 1237, 1682, 1775
Sau96I	GGNCC	1 cut(s)	1403
SchI	GAGTC	4 cut(s)	392, 551, 1743, 1781
ScrFI	CCNGG	4 cut(s)	770, 1082, 1292, 1325
SduI	GDGCHC	4 cut(s)	416, 613, 787, 1346
SfaNI	GCATC	2 cut(s)	409, 484
SfcI	CTRYAG	2 cut(s)	1347, 1588
SmiMI	CAYNNNNRTG	2 cut(s)	63, 1536
SmlI	CTYRAG	2 cut(s)	333, 847
SmoI	CTYRAG	2 cut(s)	333, 847
Sse9I	AATT	5 cut(s)	387, 447, 631, 643, 1221
SsiI	CCGC	4 cut(s)	35, 606, 741, 1508
SspMI	CTAG	5 cut(s)	668, 1259, 1283, 1449, 1826
StyD4I	CCNGG	4 cut(s)	768, 1080, 1290, 1323
StyI	CCWWGG	2 cut(s)	183, 820
TaaI	ACNGT	1 cut(s)	782
TaiI	ACGT	3 cut(s)	26, 1567, 1879
TaqI	TCGA	7 cut(s)	14, 1090, 1150, 1219, 1548, 1685, 1774
TasI	AATT	5 cut(s)	387, 447, 631, 643, 1221
TfiI	GAWTC	3 cut(s)	664, 1197, 1445
Tru1I	TTAA	5 cut(s)	102, 1014, 1062, 1134, 1518
Tru9I	TTAA	5 cut(s)	102, 1014, 1062, 1134, 1518
TscAI	CASTG	2 cut(s)	421, 1583
TseFI	GTSAC	3 cut(s)	479, 913, 1809
TseI	GCWGC	6 cut(s)	853, 1394, 1497, 1587, 1590, 1721
Tsp45I	GTSAC	3 cut(s)	479, 913, 1809
TspDTI	ATGAA	8 cut(s)	525, 615, 644, 956, 998, 1068, 1566, 1690
TspRI	CASTG	2 cut(s)	421, 1583
VspI	ATTAAT	1 cut(s)	1134
XagI	CCTNNNNNAGG	1 cut(s)	210
XapI	RAATTY	4 cut(s)	447, 631, 643, 1221
XbaI	TCTAGA	4 cut(s)	667, 1258, 1448, 1825
XceI	RCATGY	1 cut(s)	1822
XmiI	GTMKAC	2 cut(s)	201, 218
XmnI	GAANNNNTTC	2 cut(s)	644, 803
XspI	CTAG	5 cut(s)	668, 1259, 1283, 1449, 1826
Zsp2I	ATGCAT	2 cut(s)	764, 1025

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.