AT1G31910

GHMP kinase family protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
11456802 .. 11463896
7095 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G31910.1

Sequence Viewer

Length: 1518 bp
ATGGCTGTTGTTGCTTCTGCTCCTGGGAAAGTTTTGATGACTGGAGGCTACCTTGTACTCGAGAAGCCAAATGCAGGGCTTGTGTTGAGTACAAATGCACGGTTTTACGCGATTGTGAAGCCAATCAACGAAGAAGTCAAGCCTGAAAGTTGGGCATGGAAATGGACAGATGTCAAATTAACATCACCACAGCTCTCGAGAGAAAGCATGTATAAACTGTCACTGAATCATTTGACTCTTCAGTCTGTGTCTGCAAGTGATTCAAGAAACCCCTTTGTAGAGCATGCGATACAGTATGCTATAGCTGCTGCTCATTTGGCAACCGAGAAGGACAAAGAATCATTGCACAAACTCTTATTGCAAGGTCTTGATATAACAATATTAGGCTCCAATGACTTTTACTCATATCGGAACCAGATAGAATCGGCTGGGCTTCCATTGACACCAGAATCGCTGGGTACCCTTGCACCGTTTGCATCAATCACATTCAATGCTGCGGAGTCAAATGGTGCTAATTCCAAGCCTGAAGTAGCAAAAACTGGCTTAGGTTCTTCTGCAGCAATGACAACAGCTGTGGTTGCAGCTCTGTTACATTATCTTGGAGTGGTTGACCTATCTGATCCATGTAAAGAAGGAAAGTTTGGCTGTTCTGATCTAGATGTTATCCATATGATAGCACAAACGTCTCATTGTCTTGCACAAGGGAAGGTCGGAAGTGGGTTTGATGTCAGCTGTGCTGTCTATGGAAGTCAGCGTTATGTTCGCTTCTCTCCAGAAGTCTTGTCATTTGCTCAGGTTGCAGTAACAGGTCTGCCATTAAATGAAGTTATTGGTACAATTTTGAAGGGAAAATGGGACAATAAGAGAACTGAGTTCTCTTTACCACCACTGATGAATCTTTTCCTTGGAGAACCTGGAAGTGGTGGATCCTCCACACCATCAATGGTAGGTGCAGTAAAGAAGTGGCAAATGTCTGATCCAGAGAAGGCACGAGAAAACTGGCAGAATTTGTCAGATGCAAATTTAGAACTGGAAACTAAGCTAAACGATCTGAGCAAATTAGCTAAAGACCACTGGGATGTTTATCTACGAGTCATTAAGTCTTGTAGTGTGCTTACTTCTGAAAAGTGGGTGTTACATGCTACTGAACCAATCAACGAAGCCATTATTAAAGAACTCTTAGAGGCAAGAGAAGCTATGTTGAGGATCAGAATTCTTATGCGTCAGATGGGTGAGGCGGCTAGCGTTCCGATAGAGCCTGAATCTCAAACTCAACTTTTGGATTCTACAATGAGTGCTGAAGGAGTTCTACTTGCTGGTGTTCCTGGAGCTGGTGGATTTGATGCCATATTTGCAATCACTTTAGGGGATTCCGGCACCAAACTGACCCAGGCATGGAGTTCGCACAATGTTTTGGCCTTGTTGGTGAGAGAAGATCCACATGGCGTTTGCCTAGAAAGTGGTGATCCACGAACCACATGTATTACTTCAGGCGTTTCATCAATTCACCTTGAGTAA

Protein Analysis

505

Amino Acids

54.41

Weight (kDa)

5.55

Isoelectric Point (pI)

36.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GHMP_kinases_N PF00288 179 - 249 1.5e-06 GHMP kinases N terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010984)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 241
Acc65I GGTACC 1 cut(s) 458
AccB1I GGYRCC 2 cut(s) 458, 1376
AccII CGCG 1 cut(s) 110
AciI CCGC 2 cut(s) 497, 1238
AclWI GGATC 7 cut(s) 614, 921, 934, 971, 1214, 1430, 1460
AcsI RAATTY 3 cut(s) 1006, 1021, 1212
AcuI CTGAAG 4 cut(s) 224, 546, 1320, 1473
AfaI GTAC 4 cut(s) 57, 91, 460, 835
AfiI CCNNNNNNNGG 4 cut(s) 74, 920, 1331, 1395
AflIII ACRYGT 1 cut(s) 1478
AgsI TTSAA 3 cut(s) 264, 490, 844
AjnI CCWGG 4 cut(s) 22, 913, 1324, 1389
AjuI GAANNNNNNNTTGG 2 cut(s) 624, 656
AluBI AGCT 9 cut(s) 193, 305, 572, 584, 732, 1042, 1064, 1196, 1331
AluI AGCT 9 cut(s) 193, 305, 572, 584, 732, 1042, 1064, 1196, 1331
Alw26I GTCTC 1 cut(s) 690
AlwI GGATC 7 cut(s) 614, 921, 934, 971, 1214, 1430, 1460
Ama87I CYCGRG 2 cut(s) 59, 196
AoxI GGCC 1 cut(s) 1416
ApeKI GCWGC 5 cut(s) 305, 308, 494, 557, 581
ApoI RAATTY 3 cut(s) 1006, 1021, 1212
Asp700I GAANNNNTTC 2 cut(s) 899, 1305
Asp718I GGTACC 1 cut(s) 458
AsuHPI GGTGA 5 cut(s) 177, 1244, 1438, 1475, 1499
AsuNHI GCTAGC 1 cut(s) 1241
AvaI CYCGRG 2 cut(s) 59, 196
BamHI GGATCC 1 cut(s) 926
BanI GGYRCC 2 cut(s) 458, 1376
BarI GAAGNNNNNNTAC 2 cut(s) 1293, 1325
BauI CACGAG 1 cut(s) 990
BbvI GCAGC 5 cut(s) 292, 295, 481, 569, 593
BccI CCATC 2 cut(s) 946, 1222
BcgI CGANNNNNNTGC 2 cut(s) 1383, 1417
BciT130I CCWGG 4 cut(s) 24, 915, 1326, 1391
BcoDI GTCTC 1 cut(s) 690
BfaI CTAG 3 cut(s) 656, 1242, 1454
BfmI CTRYAG 2 cut(s) 300, 555
BisI GCNGC 6 cut(s) 306, 309, 495, 558, 582, 1239
BlsI GCNGC 6 cut(s) 307, 310, 496, 559, 583, 1240
Bme1390I CCNGG 4 cut(s) 24, 915, 1326, 1391
BmeT110I CYCGRG 2 cut(s) 59, 196
BmiI GGNNCC 5 cut(s) 388, 413, 460, 928, 1378
BmrFI CCNGG 4 cut(s) 24, 915, 1326, 1391
BmrI ACTGGG 1 cut(s) 1084
BmsI GCATC 3 cut(s) 485, 1006, 1333
BmtI GCTAGC 1 cut(s) 1245
BmuI ACTGGG 1 cut(s) 1084
BoxI GACNNNNGTC 1 cut(s) 170
BpmI CTGGAG 3 cut(s) 63, 756, 1347
Bpu10I CCTNAGC 2 cut(s) 544, 792
BsaBI GATNNNNATC 1 cut(s) 1083
BsaJI CCNNGG 3 cut(s) 23, 904, 1389
Bsc4I CCNNNNNNNGG 4 cut(s) 74, 920, 1331, 1395
Bse1I ACTGG 5 cut(s) 46, 544, 1004, 1035, 1079
Bse3DI GCAATG 2 cut(s) 341, 567
Bse8I GATNNNNATC 1 cut(s) 1083
BseBI CCWGG 4 cut(s) 24, 915, 1326, 1391
BseDI CCNNGG 3 cut(s) 23, 904, 1389
BseGI GGATG 1 cut(s) 1084
BseJI GATNNNNATC 1 cut(s) 1083
BseLI CCNNNNNNNGG 4 cut(s) 74, 920, 1331, 1395
BseMI GCAATG 2 cut(s) 341, 567
BseMII CTCAG 3 cut(s) 806, 861, 1043
BseNI ACTGG 5 cut(s) 46, 544, 1004, 1035, 1079
BseXI GCAGC 5 cut(s) 292, 295, 481, 569, 593
BseYI CCCAGC 2 cut(s) 428, 454
BsgI GTGCAG 1 cut(s) 972
Bsh1236I CGCG 1 cut(s) 110
BshFI GGCC 1 cut(s) 1418
BshNI GGYRCC 2 cut(s) 458, 1376
BsiHKCI CYCGRG 2 cut(s) 59, 196
BsiSI CCGG 1 cut(s) 1374
BslFI GGGAC 1 cut(s) 869
BslI CCNNNNNNNGG 4 cut(s) 74, 920, 1331, 1395
BsmAI GTCTC 1 cut(s) 690
BsmBI CGTCTC 1 cut(s) 690
BsmFI GGGAC 1 cut(s) 869
BsnI GGCC 1 cut(s) 1418
BsoBI CYCGRG 2 cut(s) 59, 196
Bsp143I GATC 8 cut(s) 619, 652, 926, 976, 1048, 1206, 1435, 1465
BspACI CCGC 2 cut(s) 497, 1238
BspANI GGCC 1 cut(s) 1418
BspCNI CTCAG 3 cut(s) 805, 862, 1044
BspFNI CGCG 1 cut(s) 110
BspLI GGNNCC 5 cut(s) 388, 413, 460, 928, 1378
BspMAI CTGCAG 1 cut(s) 559
BspOI GCTAGC 1 cut(s) 1245
BspPI GGATC 7 cut(s) 614, 921, 934, 971, 1214, 1430, 1460
BspT107I GGYRCC 2 cut(s) 458, 1376
BsrDI GCAATG 2 cut(s) 341, 567
BsrI ACTGG 5 cut(s) 46, 544, 1004, 1035, 1079
BssECI CCNNGG 3 cut(s) 23, 904, 1389
BssMI GATC 8 cut(s) 619, 652, 926, 976, 1048, 1206, 1435, 1465
BssSI CACGAG 1 cut(s) 990
BssT1I CCWWGG 1 cut(s) 904
Bst2BI CACGAG 1 cut(s) 990
Bst2UI CCWGG 4 cut(s) 24, 915, 1326, 1391
Bst4CI ACNGT 4 cut(s) 102, 219, 294, 471
Bst6I CTCTTC 1 cut(s) 243
BstAPI GCANNNNNTGC 1 cut(s) 473
BstC8I GCNNGC 2 cut(s) 285, 1243
BstDEI CTNAG 6 cut(s) 544, 792, 870, 1038, 1052, 1180
BstF5I GGATG 1 cut(s) 1084
BstFNI CGCG 1 cut(s) 110
BstKTI GATC 8 cut(s) 622, 655, 929, 979, 1051, 1209, 1438, 1468
BstMAI GTCTC 1 cut(s) 690
BstMBI GATC 8 cut(s) 619, 652, 926, 976, 1048, 1206, 1435, 1465
BstMWI GCNNNNNNNGC 8 cut(s) 11, 305, 317, 473, 578, 797, 1193, 1352
BstNI CCWGG 4 cut(s) 24, 915, 1326, 1391
BstNSI RCATGY 4 cut(s) 211, 287, 1142, 1482
BstPAI GACNNNNGTC 1 cut(s) 170
BstSCI CCNGG 4 cut(s) 22, 913, 1324, 1389
BstSFI CTRYAG 2 cut(s) 300, 555
BstUI CGCG 1 cut(s) 110
BstV1I GCAGC 5 cut(s) 292, 295, 481, 569, 593
BstX2I RGATCY 2 cut(s) 926, 1435
BstYI RGATCY 2 cut(s) 926, 1435
BsuRI GGCC 1 cut(s) 1418
BtsCI GGATG 1 cut(s) 1084
BtsIMutI CAGTG 3 cut(s) 221, 887, 1072
Cac8I GCNNGC 2 cut(s) 285, 1243
CseI GACGC 1 cut(s) 1211
Csp6I GTAC 4 cut(s) 56, 90, 459, 834
CspCI CAANNNNNGTGG 2 cut(s) 555, 590
CviAII CATG 8 cut(s) 156, 208, 284, 624, 1139, 1395, 1442, 1479
CviQI GTAC 4 cut(s) 56, 90, 459, 834
DdeI CTNAG 6 cut(s) 544, 792, 870, 1038, 1052, 1180
DpnI GATC 8 cut(s) 621, 654, 928, 978, 1050, 1208, 1437, 1467
DpnII GATC 8 cut(s) 619, 652, 926, 976, 1048, 1206, 1435, 1465
DrdI GACNNNNNNGTC 1 cut(s) 241
DseDI GACNNNNNNGTC 1 cut(s) 241
Eam1104I CTCTTC 1 cut(s) 243
EarI CTCTTC 1 cut(s) 243
Eco130I CCWWGG 1 cut(s) 904
Eco57I CTGAAG 4 cut(s) 224, 546, 1320, 1473
Eco88I CYCGRG 2 cut(s) 59, 196
EcoRI GAATTC 1 cut(s) 1212
EcoRII CCWGG 4 cut(s) 22, 913, 1324, 1389
EcoT14I CCWWGG 1 cut(s) 904
ErhI CCWWGG 1 cut(s) 904
Esp3I CGTCTC 1 cut(s) 690
FaeI CATG 8 cut(s) 159, 211, 287, 627, 1142, 1398, 1445, 1482
FaqI GGGAC 1 cut(s) 869
FatI CATG 8 cut(s) 155, 207, 283, 623, 1138, 1394, 1441, 1478
FauNDI CATATG 1 cut(s) 669
Fnu4HI GCNGC 6 cut(s) 306, 309, 495, 558, 582, 1239
FokI GGATG 1 cut(s) 1091
Fsp4HI GCNGC 6 cut(s) 306, 309, 495, 558, 582, 1239
FspBI CTAG 3 cut(s) 656, 1242, 1454
GluI GCNGC 6 cut(s) 306, 309, 495, 558, 582, 1239
GsaI CCCAGC 2 cut(s) 432, 458
GsuI CTGGAG 3 cut(s) 63, 756, 1347
HaeIII GGCC 1 cut(s) 1418
HapII CCGG 1 cut(s) 1374
HgaI GACGC 1 cut(s) 1211
Hin1II CATG 8 cut(s) 159, 211, 287, 627, 1142, 1398, 1445, 1482
HincII GTYRAC 1 cut(s) 610
HindII GTYRAC 1 cut(s) 610
HpaII CCGG 1 cut(s) 1374
HphI GGTGA 5 cut(s) 177, 1244, 1438, 1475, 1499
Hpy166II GTNNAC 1 cut(s) 610
Hpy188III TCNNGA 8 cut(s) 61, 196, 198, 264, 368, 656, 773, 980
Hpy8I GTNNAC 1 cut(s) 610
HpyAV CCTTC 6 cut(s) 322, 626, 700, 838, 979, 1295
HpyCH4III ACNGT 4 cut(s) 102, 219, 294, 471
HpyCH4IV ACGT 1 cut(s) 683
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 305, 317, 473, 578, 797, 1193, 1352
HpyF3I CTNAG 6 cut(s) 544, 792, 870, 1038, 1052, 1180
HpySE526I ACGT 1 cut(s) 683
Hsp92II CATG 8 cut(s) 159, 211, 287, 627, 1142, 1398, 1445, 1482
KpnI GGTACC 1 cut(s) 462
Kzo9I GATC 8 cut(s) 619, 652, 926, 976, 1048, 1206, 1435, 1465
LmnI GCTCC 3 cut(s) 25, 392, 1328
Lsp1109I GCAGC 5 cut(s) 292, 295, 481, 569, 593
LweI GCATC 3 cut(s) 485, 1006, 1333
MaeI CTAG 3 cut(s) 656, 1242, 1454
MaeII ACGT 1 cut(s) 683
MaeIII GTNAC 4 cut(s) 219, 588, 802, 1134
MalI GATC 8 cut(s) 621, 654, 928, 978, 1050, 1208, 1437, 1467
MboI GATC 8 cut(s) 619, 652, 926, 976, 1048, 1206, 1435, 1465
MboII GAAGA 4 cut(s) 143, 230, 543, 1445
MflI RGATCY 2 cut(s) 926, 1435
MluCI AATT 8 cut(s) 176, 514, 837, 1006, 1021, 1058, 1212, 1503
MlyI GAGTC 3 cut(s) 229, 509, 1101
MmeI TCCRAC 1 cut(s) 691
MnlI CCTC 5 cut(s) 38, 940, 1177, 1197, 1228
MroXI GAANNNNTTC 2 cut(s) 899, 1305
MseI TTAA 4 cut(s) 179, 818, 1098, 1170
MslI CAYNNNNRTG 2 cut(s) 160, 1077
MspA1I CMGCKG 2 cut(s) 572, 732
MspI CCGG 1 cut(s) 1374
MspR9I CCNGG 4 cut(s) 24, 915, 1326, 1391
MvaI CCWGG 4 cut(s) 24, 915, 1326, 1391
MvnI CGCG 1 cut(s) 110
MwoI GCNNNNNNNGC 8 cut(s) 11, 305, 317, 473, 578, 797, 1193, 1352
NdeI CATATG 1 cut(s) 669
NdeII GATC 8 cut(s) 619, 652, 926, 976, 1048, 1206, 1435, 1465
NheI GCTAGC 1 cut(s) 1241
NlaIII CATG 8 cut(s) 159, 211, 287, 627, 1142, 1398, 1445, 1482
NlaIV GGNNCC 5 cut(s) 388, 413, 460, 928, 1378
NmuCI GTSAC 1 cut(s) 219
NspI RCATGY 4 cut(s) 211, 287, 1142, 1482
PaeI GCATGC 1 cut(s) 287
PaeR7I CTCGAG 2 cut(s) 59, 196
PciI ACATGT 1 cut(s) 1478
PdmI GAANNNNTTC 2 cut(s) 899, 1305
PfeI GAWTC 9 cut(s) 226, 260, 338, 422, 449, 895, 1262, 1283, 1370
PfoI TCCNGGA 1 cut(s) 1324
PkrI GCNGC 6 cut(s) 307, 310, 496, 559, 583, 1240
PleI GAGTC 3 cut(s) 229, 508, 1100
PpsI GAGTC 3 cut(s) 229, 508, 1100
PscI ACATGT 1 cut(s) 1478
PshAI GACNNNNGTC 1 cut(s) 170
Psp6I CCWGG 4 cut(s) 22, 913, 1324, 1389
PspFI CCCAGC 2 cut(s) 428, 454
PspGI CCWGG 4 cut(s) 22, 913, 1324, 1389
PspN4I GGNNCC 5 cut(s) 388, 413, 460, 928, 1378
PstI CTGCAG 1 cut(s) 559
PsuI RGATCY 2 cut(s) 926, 1435
PvuII CAGCTG 2 cut(s) 572, 732
RsaI GTAC 4 cut(s) 57, 91, 460, 835
RsaNI GTAC 4 cut(s) 56, 90, 459, 834
RseI CAYNNNNRTG 2 cut(s) 160, 1077
SaqAI TTAA 4 cut(s) 179, 818, 1098, 1170
SatI GCNGC 6 cut(s) 306, 309, 495, 558, 582, 1239
Sau3AI GATC 8 cut(s) 619, 652, 926, 976, 1048, 1206, 1435, 1465
SchI GAGTC 3 cut(s) 229, 509, 1101
ScrFI CCNGG 4 cut(s) 24, 915, 1326, 1391
SfaNI GCATC 3 cut(s) 485, 1006, 1333
SfcI CTRYAG 2 cut(s) 300, 555
Sfr274I CTCGAG 2 cut(s) 59, 196
SlaI CTCGAG 2 cut(s) 59, 196
SmiMI CAYNNNNRTG 2 cut(s) 160, 1077
SmlI CTYRAG 3 cut(s) 59, 196, 1511
SmoI CTYRAG 3 cut(s) 59, 196, 1511
SphI GCATGC 1 cut(s) 287
Sse9I AATT 8 cut(s) 176, 514, 837, 1006, 1021, 1058, 1212, 1503
SsiI CCGC 2 cut(s) 497, 1238
SspI AATATT 1 cut(s) 381
SspMI CTAG 3 cut(s) 656, 1242, 1454
StyD4I CCNGG 4 cut(s) 22, 913, 1324, 1389
StyI CCWWGG 1 cut(s) 904
TaaI ACNGT 4 cut(s) 102, 219, 294, 471
TaiI ACGT 1 cut(s) 686
TaqI TCGA 2 cut(s) 60, 197
TasI AATT 8 cut(s) 176, 514, 837, 1006, 1021, 1058, 1212, 1503
TatI WGTACW 2 cut(s) 55, 89
TauI GCSGC 1 cut(s) 1241
TfiI GAWTC 9 cut(s) 226, 260, 338, 422, 449, 895, 1262, 1283, 1370
Tru1I TTAA 4 cut(s) 179, 818, 1098, 1170
Tru9I TTAA 4 cut(s) 179, 818, 1098, 1170
TscAI CASTG 3 cut(s) 228, 894, 1079
TseFI GTSAC 1 cut(s) 219
TseI GCWGC 5 cut(s) 305, 308, 494, 557, 581
Tsp45I GTSAC 1 cut(s) 219
TspDTI ATGAA 3 cut(s) 837, 908, 1488
TspRI CASTG 3 cut(s) 228, 894, 1079
XapI RAATTY 3 cut(s) 1006, 1021, 1212
XbaI TCTAGA 1 cut(s) 655
XceI RCATGY 4 cut(s) 211, 287, 1142, 1482
XcmI CCANNNNNNNNNTGG 1 cut(s) 940
XhoI CTCGAG 2 cut(s) 59, 196
XmnI GAANNNNTTC 2 cut(s) 899, 1305
XspI CTAG 3 cut(s) 656, 1242, 1454
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.