Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0010984

Physical Location & Seq

Genomic Coordinates Reverse (-)

28979912 .. 28985390

Gene Structure 5479 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1240600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGGAGGCTGTAGTTGCTTCAGCTCCAGGGAAGGTGTTGTTGACTGGAGGTTACCTAATTCTGGAGAGACCCAATGCAGGCCTTGTACTCAGCACCAACGCCCGCTTCTTCGCCATTGTCAAACCGTTTTACCAGCCTCTCAAGCCCGATAGCTGGGCCTCGGGTTGTACAGATGTGAAATTGACGTCTCCTCAGCTCGCCAGAGAAAGCGTCTACAAACTCTCCCTAAAAAATTTATCACTTGAATATGTTTCTTCAGGTGACTCGAGGAACCCTTTTGTGGAACAAGCAGTCCAATACTGTGTAGCTGCTGCCCGTGCAACGGTTGACAAGAAGAACAAGGATTCGTTAGAAAAACTACTATTGCATGGTCTTGATATCACGATCTTAGGTAGCAATGACTTTTATTCTTATCGGAATCAGATTGAAGCCCGTGGTCTGCCTTTGACTCCAGACGCATTGGCTACACTACCTCCTTTTGCATCGATTACCTTCAATGATGAGGGATCAAATGTAGAAAACTGTAAACCTGAAGTTGCAAAAACTGGATTGGGTTCGTCTGCGGCAATGACAACCGCTGTGGTTGCTGCGTTGCTTCACTACCTCGGAGTTGTTAATCTTCCATCTATGCTTAAAGATCATCAACATGAAAAGCACATTGCAGATCTTGATTTGGTGCATGTGATAGCTCAGACTGCTCACTGTATTGCACAGGGAAAAGTGGGCAGTGGGTTTGATGTTAGTTCTGCAGTTTATGGAAGTCAACGTTATGTCCGCTTTTCACCAGAAGTTATTTCTTCTGCTCAGGTTGCAGTGACGGGAACACCACTACAAGAAGTCGTTCCTCAAATCCTAAAAGGAAAATGGGACCATGATAGGACTAAGTTCTCCTTGCCACCATTGATGACTCTTTTACTTGGAGAACCAGGAACTGGAGGATCATCCACTCCATCAATGGTGGGTTCTGTGAAAAAGTGGCAGAAGTCTGACCCTCAGAAATCGCTGGAGACATGGAAAAAGTTGTCGGAGGCAAATTCAGCACTTGAAATGCAACTCAATACATTAAGCAAATTGGCAGAAGAACACTGGGAAGAATATAAAAGCTTGATATACAGCTGCAGCATCCTCAAATCAGAGAAGTGGACACAACAAGTCTCTAAACCAAGCCAAGAAATAATTGTTAAAACATTATTAGGAGCAAGAGACGCTATGCTTGGGATCAGATATCATATGCATCAGATGGGAGAGGCTGCAGGTGTTCCGATAGAACCAGAATCACAGACAAAGCTTTTGGATGCTACTATGGATATGGAAGGAGTGTTGTTGGCTGGAGTTCCCGGAGCAGGTGGGTTTGATGCAGTATTTGCCGTTACCTTAGGGGATGCTGGGAGCCATGTGTCGAATTCTTGGAGTTCATTCAATGTTTTGGCCTTGTTAGTTAGAGAAGATCCTCAAGGTGTTTCTTTGGAGACTGCAGATCCACGAACCAAGGAAATAACTTCATCCATTTCCTCAGTTAATGTTGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004631 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006066 GO:0006084 GO:0006139 GO:0006163 GO:0006629 GO:0006637 GO:0006644 GO:0006694 GO:0006696 GO:0006720 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008202 GO:0008204 GO:0008299 GO:0008610 GO:0008654 GO:0009058 GO:0009117 GO:0009150 GO:0009240 GO:0009259 GO:0009987 GO:0016125 GO:0016126 GO:0016128 GO:0016129 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016776 GO:0019287 GO:0019637 GO:0019693 GO:0033865 GO:0033875 GO:0034032 GO:0034641 GO:0035383 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0044107 GO:0044108 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046165 GO:0046483 GO:0046490 GO:0051186 GO:0055086 GO:0071704 GO:0072521 GO:0090407 GO:0097384 GO:1901135 GO:1901360 GO:1901362 GO:1901564 GO:1901576 GO:1901615 GO:1901617 GO:1902652 GO:1902653

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 map00900 map01100 map01110 map01130

Pfam Domains

Protein Families

GHMP_kinases_C GHMP_kinases_N

Protein Analysis

510

Amino Acids

54.84

Weight (kDa)

5.98

Isoelectric Point (pI)

32.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GHMP_kinases_N	PF00288	180 - 253	4.7e-06	GHMP kinases N terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010984)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31910 AT1G31910
fragaria_vesca	FvH4_5g23300
malus_domestica	MD09G1247700.v1.1 MD17G1240600.v1.1
prunus_persica	Prupe.5G026300_v2.0.a1 Prupe.5G026300_v2.0.a1
pyrus_communis	pycom09g16520 pycom17g24390
rosa_chinensis	RchiOBHm_Chr7g0212251
rosa_laevigata	RLG00000002903
rosa_multiflora	Rmu_sc0001911.1_g000042 Rmu_sc0002882.1_g000066
rosa_roxburghii	Rroxscaffold_3G00246980
rosa_rugosa	Rorug07G0132800
rosa_samantha	Rh7AG265600 Rh7BG259800 Rh7CG282400 Rh7DG272500
rosa_wichuraiana	Rw7G022740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1244, 1334
AatII	GACGTC	1 cut(s)	188
Acc36I	ACCTGC	2 cut(s)	1244, 1334
AccB7I	CCANNNNNTGG	1 cut(s)	932
AccI	GTMKAC	1 cut(s)	213
AciI	CCGC	4 cut(s)	103, 563, 576, 775
AclI	AACGTT	1 cut(s)	766
AclWI	GGATC	5 cut(s)	514, 946, 1226, 1442, 1472
AcsI	RAATTY	3 cut(s)	232, 1033, 1402
AcuI	CTGAAG	2 cut(s)	240, 552
AcyI	GRCGYC	1 cut(s)	185
AfaI	GTAC	2 cut(s)	87, 169
AfiI	CCNNNNNNNGG	7 cut(s)	61, 77, 153, 280, 322, 932, 1343
AgsI	TTSAA	5 cut(s)	245, 428, 496, 1046, 1420
AjnI	CCWGG	2 cut(s)	25, 925
AjuI	GAANNNNNNNTTGG	2 cut(s)	89, 121
AloI	GAACNNNNNNTCC	2 cut(s)	276, 308
AluBI	AGCT	8 cut(s)	23, 153, 196, 308, 689, 1104, 1116, 1288
AluI	AGCT	8 cut(s)	23, 153, 196, 308, 689, 1104, 1116, 1288
Alw26I	GTCTC	6 cut(s)	61, 192, 1001, 1159, 1197, 1463
AlwI	GGATC	5 cut(s)	514, 946, 1226, 1442, 1472
AlwNI	CAGNNNCTG	1 cut(s)	932
Ama87I	CYCGRG	2 cut(s)	160, 265
AoxI	GGCC	3 cut(s)	79, 156, 1428
ApeKI	GCWGC	6 cut(s)	308, 311, 587, 1116, 1119, 1250
ApoI	RAATTY	3 cut(s)	232, 1033, 1402
ArsI	GACNNNNNNTTYG	2 cut(s)	1273, 1305
Asp700I	GAANNNNTTC	1 cut(s)	840
AspS9I	GGNCC	2 cut(s)	156, 868
AsuC2I	CCSGG	1 cut(s)	1338
AsuHPI	GGTGA	2 cut(s)	272, 774
AvaI	CYCGRG	2 cut(s)	160, 265
AvaII	GGWCC	1 cut(s)	868
AxyI	CCTNAGG	1 cut(s)	1375
BbvCI	CCTCAGC	1 cut(s)	192
BbvI	GCAGC	6 cut(s)	295, 298, 574, 1103, 1131, 1237
BccI	CCATC	3 cut(s)	631, 958, 1234
BceAI	ACGGC	1 cut(s)	1352
BciT130I	CCWGG	2 cut(s)	27, 927
BcnI	CCSGG	1 cut(s)	1338
BcoDI	GTCTC	6 cut(s)	61, 192, 1001, 1159, 1197, 1463
BfmI	CTRYAG	5 cut(s)	9, 747, 1117, 1251, 1473
BfuAI	ACCTGC	2 cut(s)	1244, 1334
BglII	AGATCT	1 cut(s)	664
BisI	GCNGC	7 cut(s)	309, 312, 564, 588, 1117, 1120, 1251
BlsI	GCNGC	7 cut(s)	310, 313, 565, 589, 1118, 1121, 1252
Bme1390I	CCNGG	3 cut(s)	27, 927, 1338
Bme18I	GGWCC	1 cut(s)	868
BmeT110I	CYCGRG	2 cut(s)	160, 265
BmgT120I	GGNCC	2 cut(s)	156, 868
BmiI	GGNNCC	3 cut(s)	272, 869, 1391
BmrFI	CCNGG	3 cut(s)	27, 927, 1338
BmrI	ACTGGG	1 cut(s)	1096
BmsI	GCATC	6 cut(s)	491, 1131, 1243, 1285, 1345, 1372
BmuI	ACTGGG	1 cut(s)	1096
BpmI	CTGGAG	7 cut(s)	9, 66, 83, 435, 954, 1025, 1350
Bpu10I	CCTNAGC	2 cut(s)	192, 804
BpuEI	CTTGAG	2 cut(s)	125, 1437
BpuMI	CCSGG	1 cut(s)	1338
Bsa29I	ATCGAT	1 cut(s)	485
BsaHI	GRCGYC	1 cut(s)	185
BsaI	GGTCTC	1 cut(s)	61
BsaJI	CCNNGG	5 cut(s)	26, 159, 433, 604, 1488
BsaXI	ACNNNNNCTCC	4 cut(s)	206, 236, 457, 487
Bsc4I	CCNNNNNNNGG	7 cut(s)	61, 77, 153, 280, 322, 932, 1343
Bse1I	ACTGG	4 cut(s)	49, 550, 937, 1091
Bse21I	CCTNAGG	1 cut(s)	1375
Bse3DI	GCAATG	3 cut(s)	403, 573, 657
BseBI	CCWGG	2 cut(s)	27, 927
BseCI	ATCGAT	1 cut(s)	485
BseDI	CCNNGG	5 cut(s)	26, 159, 433, 604, 1488
BseGI	GGATG	5 cut(s)	941, 1122, 1300, 1387, 1502
BseLI	CCNNNNNNNGG	7 cut(s)	61, 77, 153, 280, 322, 932, 1343
BseMI	GCAATG	3 cut(s)	403, 573, 657
BseMII	CTCAG	6 cut(s)	103, 206, 704, 818, 1007, 1527
BseNI	ACTGG	4 cut(s)	49, 550, 937, 1091
BseRI	GAGGAG	1 cut(s)	180
BseXI	GCAGC	6 cut(s)	295, 298, 574, 1103, 1131, 1237
BseYI	CCCAGC	2 cut(s)	153, 1385
BshFI	GGCC	3 cut(s)	81, 158, 1430
BshVI	ATCGAT	1 cut(s)	485
BsiHKCI	CYCGRG	2 cut(s)	160, 265
BsiSI	CCGG	1 cut(s)	1338
BslFI	GGGAC	1 cut(s)	881
BslI	CCNNNNNNNGG	7 cut(s)	61, 77, 153, 280, 322, 932, 1343
BsmAI	GTCTC	6 cut(s)	61, 192, 1001, 1159, 1197, 1463
BsmBI	CGTCTC	2 cut(s)	192, 1197
BsmFI	GGGAC	1 cut(s)	881
BsnI	GGCC	3 cut(s)	81, 158, 1430
Bso31I	GGTCTC	1 cut(s)	61
BsoBI	CYCGRG	2 cut(s)	160, 265
Bsp1407I	TGTACA	1 cut(s)	167
Bsp143I	GATC	8 cut(s)	384, 506, 637, 664, 938, 1218, 1447, 1477
BspACI	CCGC	4 cut(s)	103, 563, 576, 775
BspANI	GGCC	3 cut(s)	81, 158, 1430
BspCNI	CTCAG	6 cut(s)	102, 205, 703, 817, 1006, 1526
BspDI	ATCGAT	1 cut(s)	485
BspLI	GGNNCC	3 cut(s)	272, 869, 1391
BspMAI	CTGCAG	4 cut(s)	751, 1121, 1255, 1477
BspMI	ACCTGC	2 cut(s)	1244, 1334
BspPI	GGATC	5 cut(s)	514, 946, 1226, 1442, 1472
BspTNI	GGTCTC	1 cut(s)	61
BsrDI	GCAATG	3 cut(s)	403, 573, 657
BsrGI	TGTACA	1 cut(s)	167
BsrI	ACTGG	4 cut(s)	49, 550, 937, 1091
BssECI	CCNNGG	5 cut(s)	26, 159, 433, 604, 1488
BssMI	GATC	8 cut(s)	384, 506, 637, 664, 938, 1218, 1447, 1477
BssNI	GRCGYC	1 cut(s)	185
BssT1I	CCWWGG	1 cut(s)	1488
Bst2UI	CCWGG	2 cut(s)	27, 927
Bst4CI	ACNGT	5 cut(s)	126, 302, 325, 524, 704
BstACI	GRCGYC	1 cut(s)	185
BstAPI	GCANNNNNTGC	1 cut(s)	1364
BstAUI	TGTACA	1 cut(s)	167
BstC8I	GCNNGC	3 cut(s)	79, 103, 198
BstDEI	CTNAG	9 cut(s)	89, 192, 388, 690, 804, 882, 993, 1375, 1513
BstDSI	CCRYGG	1 cut(s)	433
BstEII	GGTNACC	1 cut(s)	50
BstF5I	GGATG	5 cut(s)	941, 1122, 1300, 1387, 1502
BstKTI	GATC	8 cut(s)	387, 509, 640, 667, 941, 1221, 1450, 1480
BstMAI	GTCTC	6 cut(s)	61, 192, 1001, 1159, 1197, 1463
BstMBI	GATC	8 cut(s)	384, 506, 637, 664, 938, 1218, 1447, 1477
BstMWI	GCNNNNNNNGC	9 cut(s)	14, 142, 317, 584, 695, 809, 1037, 1205, 1364
BstNI	CCWGG	2 cut(s)	27, 927
BstNSI	RCATGY	1 cut(s)	683
BstPI	GGTNACC	1 cut(s)	50
BstSCI	CCNGG	3 cut(s)	25, 925, 1336
BstSFI	CTRYAG	5 cut(s)	9, 747, 1117, 1251, 1473
BstV1I	GCAGC	6 cut(s)	295, 298, 574, 1103, 1131, 1237
BstX2I	RGATCY	3 cut(s)	664, 1447, 1477
BstYI	RGATCY	3 cut(s)	664, 1447, 1477
Bsu15I	ATCGAT	1 cut(s)	485
Bsu36I	CCTNAGG	1 cut(s)	1375
BsuRI	GGCC	3 cut(s)	81, 158, 1430
BsuTUI	ATCGAT	1 cut(s)	485
BtgI	CCRYGG	1 cut(s)	433
BtsCI	GGATG	5 cut(s)	941, 1122, 1300, 1387, 1502
BtsI	GCAGTG	2 cut(s)	733, 819
BtsIMutI	CAGTG	4 cut(s)	700, 733, 819, 1084
BveI	ACCTGC	2 cut(s)	1244, 1334
Cac8I	GCNNGC	3 cut(s)	79, 103, 198
CaiI	CAGNNNCTG	1 cut(s)	932
Cfr13I	GGNCC	2 cut(s)	156, 868
ClaI	ATCGAT	1 cut(s)	485
CseI	GACGC	3 cut(s)	199, 464, 1214
Csp6I	GTAC	2 cut(s)	86, 168
CspCI	CAANNNNNGTGG	2 cut(s)	561, 596
CviAII	CATG	6 cut(s)	368, 647, 680, 872, 1011, 1394
CviQI	GTAC	2 cut(s)	86, 168
DdeI	CTNAG	9 cut(s)	89, 192, 388, 690, 804, 882, 993, 1375, 1513
DpnI	GATC	8 cut(s)	386, 508, 639, 666, 940, 1220, 1449, 1479
DpnII	GATC	8 cut(s)	384, 506, 637, 664, 938, 1218, 1447, 1477
Eco130I	CCWWGG	1 cut(s)	1488
Eco147I	AGGCCT	1 cut(s)	81
Eco31I	GGTCTC	1 cut(s)	61
Eco32I	GATATC	2 cut(s)	379, 1226
Eco47I	GGWCC	1 cut(s)	868
Eco57I	CTGAAG	2 cut(s)	240, 552
Eco81I	CCTNAGG	1 cut(s)	1375
Eco88I	CYCGRG	2 cut(s)	160, 265
Eco91I	GGTNACC	1 cut(s)	50
EcoO65I	GGTNACC	1 cut(s)	50
EcoRI	GAATTC	1 cut(s)	1402
EcoRII	CCWGG	2 cut(s)	25, 925
EcoRV	GATATC	2 cut(s)	379, 1226
EcoT14I	CCWWGG	1 cut(s)	1488
EcoT22I	ATGCAT	1 cut(s)	1236
ErhI	CCWWGG	1 cut(s)	1488
Esp3I	CGTCTC	2 cut(s)	192, 1197
FaeI	CATG	6 cut(s)	371, 650, 683, 875, 1014, 1397
FalI	AAGNNNNNCTT	2 cut(s)	875, 907
FaqI	GGGAC	1 cut(s)	881
FatI	CATG	6 cut(s)	367, 646, 679, 871, 1010, 1393
FauI	CCCGC	1 cut(s)	110
FauNDI	CATATG	1 cut(s)	1230
FblI	GTMKAC	1 cut(s)	213
Fnu4HI	GCNGC	7 cut(s)	309, 312, 564, 588, 1117, 1120, 1251
FokI	GGATG	5 cut(s)	928, 1109, 1307, 1394, 1489
Fsp4HI	GCNGC	7 cut(s)	309, 312, 564, 588, 1117, 1120, 1251
GluI	GCNGC	7 cut(s)	309, 312, 564, 588, 1117, 1120, 1251
GsaI	CCCAGC	2 cut(s)	157, 1389
GsuI	CTGGAG	7 cut(s)	9, 66, 83, 435, 954, 1025, 1350
HaeIII	GGCC	3 cut(s)	81, 158, 1430
HapII	CCGG	1 cut(s)	1338
HgaI	GACGC	3 cut(s)	199, 464, 1214
Hin1I	GRCGYC	1 cut(s)	185
Hin1II	CATG	6 cut(s)	371, 650, 683, 875, 1014, 1397
HincII	GTYRAC	3 cut(s)	42, 328, 764
HindII	GTYRAC	3 cut(s)	42, 328, 764
HindIII	AAGCTT	2 cut(s)	1102, 1286
HinfI	GANTC	6 cut(s)	263, 344, 418, 448, 907, 1274
HpaII	CCGG	1 cut(s)	1338
HphI	GGTGA	2 cut(s)	272, 774
Hpy166II	GTNNAC	6 cut(s)	42, 214, 328, 527, 764, 1143
Hpy188III	TCNNGA	5 cut(s)	62, 374, 382, 452, 668
Hpy8I	GTNNAC	6 cut(s)	42, 214, 328, 527, 764, 1143
HpyAV	CCTTC	3 cut(s)	25, 502, 1307
HpyCH4III	ACNGT	5 cut(s)	126, 302, 325, 524, 704
HpyCH4IV	ACGT	2 cut(s)	185, 766
HpyF10VI	GCNNNNNNNGC	9 cut(s)	14, 142, 317, 584, 695, 809, 1037, 1205, 1364
HpyF3I	CTNAG	9 cut(s)	89, 192, 388, 690, 804, 882, 993, 1375, 1513
HpySE526I	ACGT	2 cut(s)	185, 766
Hsp92I	GRCGYC	1 cut(s)	185
Hsp92II	CATG	6 cut(s)	371, 650, 683, 875, 1014, 1397
Kzo9I	GATC	8 cut(s)	384, 506, 637, 664, 938, 1218, 1447, 1477
LmnI	GCTCC	4 cut(s)	28, 1196, 1340, 1389
Lsp1109I	GCAGC	6 cut(s)	295, 298, 574, 1103, 1131, 1237
LweI	GCATC	6 cut(s)	491, 1131, 1243, 1285, 1345, 1372
MaeII	ACGT	2 cut(s)	185, 766
MaeIII	GTNAC	4 cut(s)	50, 260, 814, 1369
MalI	GATC	8 cut(s)	386, 508, 639, 666, 940, 1220, 1449, 1479
MboI	GATC	8 cut(s)	384, 506, 637, 664, 938, 1218, 1447, 1477
MboII	GAAGA	8 cut(s)	100, 246, 346, 611, 789, 1091, 1103, 1457
MflI	RGATCY	3 cut(s)	664, 1447, 1477
MluCI	AATT	7 cut(s)	57, 179, 232, 1033, 1070, 1176, 1402
MlyI	GAGTC	3 cut(s)	257, 442, 901
MmeI	TCCRAC	2 cut(s)	1005, 1504
Mph1103I	ATGCAT	1 cut(s)	1236
MroXI	GAANNNNTTC	1 cut(s)	840
MseI	TTAA	5 cut(s)	615, 633, 1064, 1182, 1518
MslI	CAYNNNNRTG	1 cut(s)	645
MspA1I	CMGCKG	2 cut(s)	578, 1116
MspI	CCGG	1 cut(s)	1338
MspR9I	CCNGG	3 cut(s)	27, 927, 1338
MvaI	CCWGG	2 cut(s)	27, 927
MwoI	GCNNNNNNNGC	9 cut(s)	14, 142, 317, 584, 695, 809, 1037, 1205, 1364
NciI	CCSGG	1 cut(s)	1338
NdeI	CATATG	1 cut(s)	1230
NdeII	GATC	8 cut(s)	384, 506, 637, 664, 938, 1218, 1447, 1477
NlaIII	CATG	6 cut(s)	371, 650, 683, 875, 1014, 1397
NlaIV	GGNNCC	3 cut(s)	272, 869, 1391
NmuCI	GTSAC	2 cut(s)	260, 814
NsiI	ATGCAT	1 cut(s)	1236
NspI	RCATGY	1 cut(s)	683
PaeR7I	CTCGAG	1 cut(s)	265
PaqCI	CACCTGC	2 cut(s)	1244, 1334
PceI	AGGCCT	1 cut(s)	81
PdmI	GAANNNNTTC	1 cut(s)	840
PfeI	GAWTC	3 cut(s)	344, 418, 1274
PflMI	CCANNNNNTGG	1 cut(s)	932
PfoI	TCCNGGA	1 cut(s)	1336
PkrI	GCNGC	7 cut(s)	310, 313, 565, 589, 1118, 1121, 1252
PleI	GAGTC	3 cut(s)	257, 442, 901
PpsI	GAGTC	3 cut(s)	257, 442, 901
Psp1406I	AACGTT	1 cut(s)	766
Psp6I	CCWGG	2 cut(s)	25, 925
PspEI	GGTNACC	1 cut(s)	50
PspFI	CCCAGC	2 cut(s)	153, 1385
PspGI	CCWGG	2 cut(s)	25, 925
PspN4I	GGNNCC	3 cut(s)	272, 869, 1391
PspPI	GGNCC	2 cut(s)	156, 868
PspXI	VCTCGAGB	1 cut(s)	265
PstI	CTGCAG	4 cut(s)	751, 1121, 1255, 1477
PstNI	CAGNNNCTG	1 cut(s)	932
PsuI	RGATCY	3 cut(s)	664, 1447, 1477
PvuII	CAGCTG	1 cut(s)	1116
RsaI	GTAC	2 cut(s)	87, 169
RsaNI	GTAC	2 cut(s)	86, 168
RseI	CAYNNNNRTG	1 cut(s)	645
SaqAI	TTAA	5 cut(s)	615, 633, 1064, 1182, 1518
SatI	GCNGC	7 cut(s)	309, 312, 564, 588, 1117, 1120, 1251
Sau3AI	GATC	8 cut(s)	384, 506, 637, 664, 938, 1218, 1447, 1477
Sau96I	GGNCC	2 cut(s)	156, 868
SchI	GAGTC	3 cut(s)	257, 442, 901
ScrFI	CCNGG	3 cut(s)	27, 927, 1338
SfaNI	GCATC	6 cut(s)	491, 1131, 1243, 1285, 1345, 1372
SfcI	CTRYAG	5 cut(s)	9, 747, 1117, 1251, 1473
Sfr274I	CTCGAG	1 cut(s)	265
SinI	GGWCC	1 cut(s)	868
SlaI	CTCGAG	1 cut(s)	265
SmiMI	CAYNNNNRTG	1 cut(s)	645
SmlI	CTYRAG	3 cut(s)	140, 265, 1452
SmoI	CTYRAG	3 cut(s)	140, 265, 1452
Sse9I	AATT	7 cut(s)	57, 179, 232, 1033, 1070, 1176, 1402
SseBI	AGGCCT	1 cut(s)	81
SsiI	CCGC	4 cut(s)	103, 563, 576, 775
StuI	AGGCCT	1 cut(s)	81
StyD4I	CCNGG	3 cut(s)	25, 925, 1336
StyI	CCWWGG	1 cut(s)	1488
TaaI	ACNGT	5 cut(s)	126, 302, 325, 524, 704
TaiI	ACGT	2 cut(s)	188, 769
TaqI	TCGA	3 cut(s)	266, 485, 1400
TasI	AATT	7 cut(s)	57, 179, 232, 1033, 1070, 1176, 1402
TatI	WGTACW	2 cut(s)	85, 167
TauI	GCSGC	1 cut(s)	566
TfiI	GAWTC	3 cut(s)	344, 418, 1274
Tru1I	TTAA	5 cut(s)	615, 633, 1064, 1182, 1518
Tru9I	TTAA	5 cut(s)	615, 633, 1064, 1182, 1518
TscAI	CASTG	4 cut(s)	707, 733, 819, 1091
TseFI	GTSAC	2 cut(s)	260, 814
TseI	GCWGC	6 cut(s)	308, 311, 587, 1116, 1119, 1250
Tsp45I	GTSAC	2 cut(s)	260, 814
TspDTI	ATGAA	3 cut(s)	663, 1404, 1491
TspRI	CASTG	4 cut(s)	707, 733, 819, 1091
Van91I	CCANNNNNTGG	1 cut(s)	932
VpaK11BI	GGWCC	1 cut(s)	868
XapI	RAATTY	3 cut(s)	232, 1033, 1402
XceI	RCATGY	1 cut(s)	683
XcmI	CCANNNNNNNNNTGG	1 cut(s)	952
XhoI	CTCGAG	1 cut(s)	265
XmiI	GTMKAC	1 cut(s)	213
XmnI	GAANNNNTTC	1 cut(s)	840
ZraI	GACGTC	1 cut(s)	186
Zsp2I	ATGCAT	1 cut(s)	1236

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.