Prupe.5G026300_v2.0.a1

Phosphomevalonate

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
2974859 .. 2981363
6505 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G026300.1

Sequence Viewer

Length: 1530 bp
ATGGAGGCCGTGGTTGCTTCAGCTCCAGGGAAGGTGTTGTTGACGGGAGGTTACCTGATTTTGGAGAGACCCAATGCAGGCCTTGTTCTCAGCACCAATTCTCGCTTCTTCGCCATTGTCAAGCCACTTTACCACCAGCTCAAGCCTGATAGCTGGGCTTGGGGTTGGACGGATGTGAAATTGACGTCTCCTCAGCTCTCCAGAGAAAGCATCTACAAACTCTCCCTCAAAAATTTGTCACTTGAATACGTCTCTTCAAGTGACTCGAAGAACCCTTTTGTGGAACAAGCGGTGCAATACTGTGTAGCTGCTGCCCGTGCCACAGTTGACAAGAACAAGAAAGATTCATTAGAAAAACTACTTTTGCAAGGTCTTGATATCACAATTTTAGGCAGCAATGACTTTTATTCTTATCGGAACCAGATTGAAGCCCGTGGTCTGCCTTTGACTCCGGACGCATTGGCTGCATTACCTCCTTTTGCCTCGATTACCTTCAATGCTGAGGAATCAAATGGAGAAAATTGTAAGCCTGAAGTTGCAAAAACTGGATTGGGTTCATCTGCGGCAATGACAACAGCTGTTGTTGCTGCTTTGCTTCATTACCTCAGAGTTGTTGATCTTTCCTCCGTGCTTGAAGATCATCAACATGAAAAATACACTGCAGATCTTGATTTGGTGCATGTTATAGCTCAAACTGCTCATTGCATTGCACAGGGAAAAGTGGGCAGTGGGTTTGATGTTAGTTCTGCAGTTTATGGAAGTCAACGCTATGTCCGCTTTTCACCGGAAGTGCTTTCTTCTGCTCAGGTTGCAGTGAAGGGAACTCCACTACAAGAAGTCATTCTTGAAATCCTGAAAGGAACGTGGGACCATGAGAGGACTAAGTTCTCCTTGCCACCATTGATGACTCTTTTACTTGGAGAACCAGGAACTGGAGGATCATCCACTCCATCAATGGTGGGTGCTGTGAAAAAGTGGCAGAAGGCTGACCCTCAGAAATCCTTGGAAACATGGAGAAAGTTGTCAGAGGCAAATTCAGCACTTGAAACACAACTCAGTACATTGAGCAAATTGGCAGAACAACACTGGGATGAATATGAAAGCTTGATAAAAAGCTGCAGCATTCTCAAATCAGAGAAGTGGATACACCAAGCTGCTAAACCAAACCAAGAAGCAATTACTAAAGCATTATTAGGAGCAAGAGATGCTATGCTTCGGATCAGGTATCATATGCATCAGATGGGTGAGGCTGCAGGTGTTCCGATAGAACCAGAATCACAAACTAGTCTTTTGGATGCCACTATGAATATGGAAGGAGTTTTGTTGGCTGGAGTTCCTGGAGCAGGTGGGTTTGATGCCGTATTTGCTGTTACCTTAGGGGATTCTGGAAGCCATGTTGCAAGTTCTTGGAGTTCGTTCAATGTTTTGGCCTTGTTAGTGAGAGAAGATCCTCATGGTGTTTCTTTAGAGAGTGCTGATCCACGAACCAAGGAAATTACTTCATCCATTTCTTCAGTTCACATTGAATAA

Protein Analysis

510

Amino Acids

55.1

Weight (kDa)

5.82

Isoelectric Point (pI)

33.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010984)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1244, 1334
AatII GACGTC 1 cut(s) 188
Acc36I ACCTGC 2 cut(s) 1244, 1334
AccB7I CCANNNNNTGG 1 cut(s) 932
AccIII TCCGGA 1 cut(s) 451
AciI CCGC 3 cut(s) 290, 563, 775
AclWI GGATC 4 cut(s) 946, 1226, 1442, 1472
AcsI RAATTY 2 cut(s) 232, 1033
AcuI CTGAAG 2 cut(s) 552, 1497
AcyI GRCGYC 1 cut(s) 185
AfaI GTAC 1 cut(s) 1060
AfiI CCNNNNNNNGG 5 cut(s) 61, 77, 280, 932, 1343
AgsI TTSAA 9 cut(s) 245, 258, 428, 496, 635, 848, 1046, 1420, 1526
AhlI ACTAGT 1 cut(s) 1283
AjnI CCWGG 3 cut(s) 25, 925, 1336
AjuI GAANNNNNNNTTGG 2 cut(s) 89, 121
Alw26I GTCTC 3 cut(s) 61, 192, 256
AlwI GGATC 4 cut(s) 946, 1226, 1442, 1472
AlwNI CAGNNNCTG 1 cut(s) 932
Aor13HI TCCGGA 1 cut(s) 451
AoxI GGCC 3 cut(s) 6, 79, 1428
ApeKI GCWGC 9 cut(s) 308, 311, 393, 464, 587, 1116, 1119, 1154, 1250
ApoI RAATTY 2 cut(s) 232, 1033
Asp700I GAANNNNTTC 1 cut(s) 840
AspS9I GGNCC 1 cut(s) 868
AsuHPI GGTGA 2 cut(s) 774, 1256
AvaII GGWCC 1 cut(s) 868
AxyI CCTNAGG 1 cut(s) 1375
BbvCI CCTCAGC 2 cut(s) 192, 501
BbvI GCAGC 9 cut(s) 295, 298, 405, 451, 574, 1103, 1131, 1141, 1237
BccI CCATC 2 cut(s) 958, 1234
BceAI ACGGC 1 cut(s) 1343
BciT130I CCWGG 3 cut(s) 27, 927, 1338
BciVI GTATCC 1 cut(s) 1137
BcoDI GTCTC 3 cut(s) 61, 192, 256
BcuI ACTAGT 1 cut(s) 1283
BfaI CTAG 1 cut(s) 1284
BfmI CTRYAG 4 cut(s) 660, 747, 1117, 1251
BfuAI ACCTGC 2 cut(s) 1244, 1334
BfuI GTATCC 1 cut(s) 1137
BglII AGATCT 1 cut(s) 664
Bme1390I CCNGG 3 cut(s) 27, 927, 1338
Bme18I GGWCC 1 cut(s) 868
BmgT120I GGNCC 1 cut(s) 868
BmiI GGNNCC 2 cut(s) 419, 869
BmrFI CCNGG 3 cut(s) 27, 927, 1338
BmrI ACTGGG 1 cut(s) 1096
BmsI GCATC 5 cut(s) 219, 1195, 1243, 1285, 1345
BmuI ACTGGG 1 cut(s) 1096
BpmI CTGGAG 5 cut(s) 9, 184, 954, 1350, 1359
Bpu10I CCTNAGC 3 cut(s) 192, 501, 804
BpuEI CTTGAG 1 cut(s) 125
BsaHI GRCGYC 1 cut(s) 185
BsaI GGTCTC 1 cut(s) 61
BsaJI CCNNGG 5 cut(s) 9, 26, 433, 1002, 1488
BsaWI WCCGGW 2 cut(s) 451, 784
BsaXI ACNNNNNCTCC 2 cut(s) 206, 236
Bsc4I CCNNNNNNNGG 5 cut(s) 61, 77, 280, 932, 1343
Bse1I ACTGG 3 cut(s) 550, 937, 1091
Bse21I CCTNAGG 1 cut(s) 1375
Bse3DI GCAATG 4 cut(s) 403, 573, 700, 705
BseAI TCCGGA 1 cut(s) 451
BseBI CCWGG 3 cut(s) 27, 927, 1338
BseDI CCNNGG 5 cut(s) 9, 26, 433, 1002, 1488
BseGI GGATG 5 cut(s) 178, 941, 1096, 1300, 1502
BseLI CCNNNNNNNGG 5 cut(s) 61, 77, 280, 932, 1343
BseMI GCAATG 4 cut(s) 403, 573, 700, 705
BseMII CTCAG 7 cut(s) 103, 206, 492, 619, 818, 1007, 1069
BseNI ACTGG 3 cut(s) 550, 937, 1091
BseRI GAGGAG 1 cut(s) 180
BseXI GCAGC 9 cut(s) 295, 298, 405, 451, 574, 1103, 1131, 1141, 1237
BseYI CCCAGC 1 cut(s) 153
BshFI GGCC 3 cut(s) 8, 81, 1430
BsiSI CCGG 2 cut(s) 452, 785
BslFI GGGAC 1 cut(s) 881
BslI CCNNNNNNNGG 5 cut(s) 61, 77, 280, 932, 1343
BsmAI GTCTC 3 cut(s) 61, 192, 256
BsmBI CGTCTC 2 cut(s) 192, 256
BsmFI GGGAC 1 cut(s) 881
BsmI GAATGC 1 cut(s) 1122
BsnI GGCC 3 cut(s) 8, 81, 1430
Bso31I GGTCTC 1 cut(s) 61
Bsp13I TCCGGA 1 cut(s) 451
Bsp143I GATC 7 cut(s) 616, 637, 664, 938, 1218, 1447, 1477
BspACI CCGC 3 cut(s) 290, 563, 775
BspANI GGCC 3 cut(s) 8, 81, 1430
BspCNI CTCAG 7 cut(s) 102, 205, 493, 618, 817, 1006, 1068
BspEI TCCGGA 1 cut(s) 451
BspLI GGNNCC 2 cut(s) 419, 869
BspMAI CTGCAG 4 cut(s) 664, 751, 1121, 1255
BspMI ACCTGC 2 cut(s) 1244, 1334
BspPI GGATC 4 cut(s) 946, 1226, 1442, 1472
BspTNI GGTCTC 1 cut(s) 61
BsrDI GCAATG 4 cut(s) 403, 573, 700, 705
BsrI ACTGG 3 cut(s) 550, 937, 1091
BssECI CCNNGG 5 cut(s) 9, 26, 433, 1002, 1488
BssMI GATC 7 cut(s) 616, 637, 664, 938, 1218, 1447, 1477
BssNI GRCGYC 1 cut(s) 185
BssT1I CCWWGG 2 cut(s) 1002, 1488
Bst2UI CCWGG 3 cut(s) 27, 927, 1338
Bst4CI ACNGT 2 cut(s) 302, 325
Bst6I CTCTTC 1 cut(s) 259
BstACI GRCGYC 1 cut(s) 185
BstAPI GCANNNNNTGC 2 cut(s) 464, 1205
BstC8I GCNNGC 1 cut(s) 79
BstDEI CTNAG 9 cut(s) 89, 192, 501, 605, 804, 882, 993, 1055, 1375
BstDSI CCRYGG 2 cut(s) 9, 433
BstEII GGTNACC 1 cut(s) 50
BstENI CCTNNNNNAGG 1 cut(s) 1341
BstF5I GGATG 5 cut(s) 178, 941, 1096, 1300, 1502
BstKTI GATC 7 cut(s) 619, 640, 667, 941, 1221, 1450, 1480
BstMAI GTCTC 3 cut(s) 61, 192, 256
BstMBI GATC 7 cut(s) 616, 637, 664, 938, 1218, 1447, 1477
BstNI CCWGG 3 cut(s) 27, 927, 1338
BstNSI RCATGY 1 cut(s) 683
BstPI GGTNACC 1 cut(s) 50
BstSCI CCNGG 3 cut(s) 25, 925, 1336
BstSFI CTRYAG 4 cut(s) 660, 747, 1117, 1251
BstV1I GCAGC 9 cut(s) 295, 298, 405, 451, 574, 1103, 1131, 1141, 1237
BstX2I RGATCY 2 cut(s) 664, 1447
BstYI RGATCY 2 cut(s) 664, 1447
Bsu36I CCTNAGG 1 cut(s) 1375
BsuI GTATCC 1 cut(s) 1137
BsuRI GGCC 3 cut(s) 8, 81, 1430
BtgI CCRYGG 2 cut(s) 9, 433
BtsCI GGATG 5 cut(s) 178, 941, 1096, 1300, 1502
BtsI GCAGTG 3 cut(s) 657, 733, 819
BtsIMutI CAGTG 4 cut(s) 657, 733, 819, 1084
BveI ACCTGC 2 cut(s) 1244, 1334
Cac8I GCNNGC 1 cut(s) 79
CaiI CAGNNNCTG 1 cut(s) 932
Cfr13I GGNCC 1 cut(s) 868
CseI GACGC 1 cut(s) 464
Csp6I GTAC 1 cut(s) 1059
CviAII CATG 6 cut(s) 647, 680, 872, 1011, 1394, 1454
CviQI GTAC 1 cut(s) 1059
DdeI CTNAG 9 cut(s) 89, 192, 501, 605, 804, 882, 993, 1055, 1375
DpnI GATC 7 cut(s) 618, 639, 666, 940, 1220, 1449, 1479
DpnII GATC 7 cut(s) 616, 637, 664, 938, 1218, 1447, 1477
Eam1104I CTCTTC 1 cut(s) 259
EarI CTCTTC 1 cut(s) 259
Eco130I CCWWGG 2 cut(s) 1002, 1488
Eco147I AGGCCT 1 cut(s) 81
Eco31I GGTCTC 1 cut(s) 61
Eco32I GATATC 1 cut(s) 379
Eco47I GGWCC 1 cut(s) 868
Eco57I CTGAAG 2 cut(s) 552, 1497
Eco81I CCTNAGG 1 cut(s) 1375
Eco91I GGTNACC 1 cut(s) 50
EcoNI CCTNNNNNAGG 1 cut(s) 1341
EcoO65I GGTNACC 1 cut(s) 50
EcoRII CCWGG 3 cut(s) 25, 925, 1336
EcoRV GATATC 1 cut(s) 379
EcoT14I CCWWGG 2 cut(s) 1002, 1488
EcoT22I ATGCAT 1 cut(s) 1236
ErhI CCWWGG 2 cut(s) 1002, 1488
Esp3I CGTCTC 2 cut(s) 192, 256
FaeI CATG 6 cut(s) 650, 683, 875, 1014, 1397, 1457
FalI AAGNNNNNCTT 4 cut(s) 828, 860, 875, 907
FaqI GGGAC 1 cut(s) 881
FatI CATG 6 cut(s) 646, 679, 871, 1010, 1393, 1453
FauNDI CATATG 1 cut(s) 1230
FokI GGATG 5 cut(s) 185, 928, 1103, 1307, 1489
FspBI CTAG 1 cut(s) 1284
GsaI CCCAGC 1 cut(s) 157
GsuI CTGGAG 5 cut(s) 9, 184, 954, 1350, 1359
HaeIII GGCC 3 cut(s) 8, 81, 1430
HapII CCGG 2 cut(s) 452, 785
HgaI GACGC 1 cut(s) 464
Hin1I GRCGYC 1 cut(s) 185
Hin1II CATG 6 cut(s) 650, 683, 875, 1014, 1397, 1457
HincII GTYRAC 3 cut(s) 42, 328, 764
HindII GTYRAC 3 cut(s) 42, 328, 764
HindIII AAGCTT 1 cut(s) 1102
HinfI GANTC 7 cut(s) 263, 344, 448, 506, 907, 1274, 1382
HpaII CCGG 2 cut(s) 452, 785
HphI GGTGA 2 cut(s) 774, 1256
Hpy166II GTNNAC 4 cut(s) 42, 328, 764, 1519
Hpy188I TCNGA 8 cut(s) 417, 608, 996, 1027, 1135, 1218, 1239, 1263
Hpy188III TCNNGA 7 cut(s) 201, 374, 452, 668, 845, 853, 1386
Hpy8I GTNNAC 4 cut(s) 42, 328, 764, 1519
HpyAV CCTTC 5 cut(s) 25, 502, 811, 976, 1307
HpyCH4III ACNGT 2 cut(s) 302, 325
HpyCH4IV ACGT 3 cut(s) 185, 249, 863
HpyF3I CTNAG 9 cut(s) 89, 192, 501, 605, 804, 882, 993, 1055, 1375
HpySE526I ACGT 3 cut(s) 185, 249, 863
Hsp92I GRCGYC 1 cut(s) 185
Hsp92II CATG 6 cut(s) 650, 683, 875, 1014, 1397, 1457
Kpn2I TCCGGA 1 cut(s) 451
Kzo9I GATC 7 cut(s) 616, 637, 664, 938, 1218, 1447, 1477
LmnI GCTCC 3 cut(s) 28, 1196, 1340
Lsp1109I GCAGC 9 cut(s) 295, 298, 405, 451, 574, 1103, 1131, 1141, 1237
LweI GCATC 5 cut(s) 219, 1195, 1243, 1285, 1345
MaeI CTAG 1 cut(s) 1284
MaeII ACGT 3 cut(s) 185, 249, 863
MaeIII GTNAC 4 cut(s) 50, 237, 260, 1369
MalI GATC 7 cut(s) 618, 639, 666, 940, 1220, 1449, 1479
MboI GATC 7 cut(s) 616, 637, 664, 938, 1218, 1447, 1477
MboII GAAGA 7 cut(s) 100, 246, 280, 647, 789, 1457, 1503
MflI RGATCY 2 cut(s) 664, 1447
MluCI AATT 9 cut(s) 97, 179, 232, 384, 520, 1033, 1070, 1176, 1494
MlyI GAGTC 3 cut(s) 257, 442, 901
MmeI TCCRAC 1 cut(s) 146
Mph1103I ATGCAT 1 cut(s) 1236
MroI TCCGGA 1 cut(s) 451
MroXI GAANNNNTTC 1 cut(s) 840
MslI CAYNNNNRTG 2 cut(s) 645, 1089
MspA1I CMGCKG 1 cut(s) 578
MspI CCGG 2 cut(s) 452, 785
MspR9I CCNGG 3 cut(s) 27, 927, 1338
Mva1269I GAATGC 1 cut(s) 1122
MvaI CCWGG 3 cut(s) 27, 927, 1338
NdeI CATATG 1 cut(s) 1230
NdeII GATC 7 cut(s) 616, 637, 664, 938, 1218, 1447, 1477
NlaIII CATG 6 cut(s) 650, 683, 875, 1014, 1397, 1457
NlaIV GGNNCC 2 cut(s) 419, 869
NmuCI GTSAC 2 cut(s) 237, 260
NsiI ATGCAT 1 cut(s) 1236
NspI RCATGY 1 cut(s) 683
PaqCI CACCTGC 2 cut(s) 1244, 1334
PceI AGGCCT 1 cut(s) 81
PctI GAATGC 1 cut(s) 1122
PdmI GAANNNNTTC 1 cut(s) 840
PfeI GAWTC 4 cut(s) 344, 506, 1274, 1382
PflMI CCANNNNNTGG 1 cut(s) 932
PfoI TCCNGGA 1 cut(s) 1336
PleI GAGTC 3 cut(s) 257, 442, 901
PpsI GAGTC 3 cut(s) 257, 442, 901
Psp6I CCWGG 3 cut(s) 25, 925, 1336
PspEI GGTNACC 1 cut(s) 50
PspFI CCCAGC 1 cut(s) 153
PspGI CCWGG 3 cut(s) 25, 925, 1336
PspN4I GGNNCC 2 cut(s) 419, 869
PspPI GGNCC 1 cut(s) 868
PstI CTGCAG 4 cut(s) 664, 751, 1121, 1255
PstNI CAGNNNCTG 1 cut(s) 932
PsuI RGATCY 2 cut(s) 664, 1447
PvuII CAGCTG 1 cut(s) 578
RsaI GTAC 1 cut(s) 1060
RsaNI GTAC 1 cut(s) 1059
RseI CAYNNNNRTG 2 cut(s) 645, 1089
Sau3AI GATC 7 cut(s) 616, 637, 664, 938, 1218, 1447, 1477
Sau96I GGNCC 1 cut(s) 868
SchI GAGTC 3 cut(s) 257, 442, 901
ScrFI CCNGG 3 cut(s) 27, 927, 1338
SfaNI GCATC 5 cut(s) 219, 1195, 1243, 1285, 1345
SfcI CTRYAG 4 cut(s) 660, 747, 1117, 1251
SinI GGWCC 1 cut(s) 868
SmiMI CAYNNNNRTG 2 cut(s) 645, 1089
SmlI CTYRAG 1 cut(s) 140
SmoI CTYRAG 1 cut(s) 140
SpeI ACTAGT 1 cut(s) 1283
Sse9I AATT 9 cut(s) 97, 179, 232, 384, 520, 1033, 1070, 1176, 1494
SseBI AGGCCT 1 cut(s) 81
SsiI CCGC 3 cut(s) 290, 563, 775
SspMI CTAG 1 cut(s) 1284
StuI AGGCCT 1 cut(s) 81
StyD4I CCNGG 3 cut(s) 25, 925, 1336
StyI CCWWGG 2 cut(s) 1002, 1488
TaaI ACNGT 2 cut(s) 302, 325
TaiI ACGT 3 cut(s) 188, 252, 866
TaqI TCGA 2 cut(s) 266, 485
TasI AATT 9 cut(s) 97, 179, 232, 384, 520, 1033, 1070, 1176, 1494
TatI WGTACW 1 cut(s) 1058
TauI GCSGC 1 cut(s) 566
TfiI GAWTC 4 cut(s) 344, 506, 1274, 1382
TscAI CASTG 4 cut(s) 664, 733, 819, 1091
TseFI GTSAC 2 cut(s) 237, 260
TseI GCWGC 9 cut(s) 308, 311, 393, 464, 587, 1116, 1119, 1154, 1250
Tsp45I GTSAC 2 cut(s) 237, 260
TspDTI ATGAA 8 cut(s) 336, 546, 587, 663, 1107, 1113, 1319, 1491
TspGWI ACGGA 2 cut(s) 185, 616
TspRI CASTG 4 cut(s) 664, 733, 819, 1091
Van91I CCANNNNNTGG 1 cut(s) 932
VpaK11BI GGWCC 1 cut(s) 868
XagI CCTNNNNNAGG 1 cut(s) 1341
XapI RAATTY 2 cut(s) 232, 1033
XceI RCATGY 1 cut(s) 683
XcmI CCANNNNNNNNNTGG 2 cut(s) 952, 1306
XmnI GAANNNNTTC 1 cut(s) 840
XspI CTAG 1 cut(s) 1284
ZraI GACGTC 1 cut(s) 186
Zsp2I ATGCAT 1 cut(s) 1236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.