AT1G32160

Protein of unknown function (DUF760)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0014092
Physical Location & Seq
Forward (+)
11568654 .. 11570438
1785 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G32160.1

Sequence Viewer

Length: 1221 bp
ATGCAAGCCATCGGTAGCAGCCATGGCAGGAGGCTCTGCTTCAACCACTATCTCTCCGATTCCTTCTCCAAATTCCTCTCTCCTTCTTCTTCTCCTTCCCTTCTCCCTCAGAGATGCCATTCGTTCTGTATCCCCAAGCTTGGAAGTAGTAGTACCAATGAGAATGGCAGAGGAAGAAGTGTAACAGTGAGAGCTTCAGGAGATGAAGATTCTAATGAGAACTTTGCTCCTCTTGCTCCTGTTGAGCTTGAATCTCCTGTAGGACAGCTTTTGGAGCAGATTCTTAGAACTCATCCTCATCTTTTACCCGTTACTGTCGATGAGCAGCTCGAGAAATTCGCCGCGGAAAGCGAGTCTCGTAAAGCTGATTCGTCTTCCACACAAGACATTCTCCAAAAGAGGATATCTGAAGTTAGAGATAAGGAAAGACGTAAAACTTTAGCAGAGATCATTTACTGTTTAGTGGTACACAGATTTGTGGAAAAAGGAATCTCTATGATTCCTCGGATTAAACCAACTTCAGACCCAGCAGGACGGATAGACTTATGGCCGAATCAAGAAGAGAAGCTCGAAGTCATTCACTCTGCGGATGCGTTCGAGATGATACAGAGTCACTTGTCTTCAGTTCTTGGAGACGGACCAGCAGTTGGTCCGTTAAGCTCTATAGTTCAGATAGGCAAAATCAAGCTAGGAAAACTCTATGCTGCTTCTGCTATGTATGGATATTTTCTCAGAAGAGTAGACCAAAGATACCAACTTGAGAGAACCATGAACACACTTCCGAAACGCCCTGAGAAAACCAGAGAACGGTTCGAAGAACCTTCGCCTCCTTACCCGTTATGGGACCCGGATTCCTTGATCAGGATTCAACCAGAGGAATATGATCCCGATGAATACGCGATACAAAGAAATGAAGATGAGTCATCGTCTTATGGATTGAGATCATATGTTACGTATTTGGACTCGGATACGCTTCAGAGATATGCCACGATACGTTCTAAAGAAGCCATGACTCTGATTGAGAAGCAGACTCAGGCGCTCTTTGGACGACCGGATATAAGGATACTCGAGGATGGAAAGCTCGATACTTCTAACGACGAGGTTCTGTCTCTGAGTGTCTCTGGACTTGCGATGTTGGTTTTGGAAGCTGTGGCTTTTGGGTCTTTCTTATGGGATTCAGAGAGTTACGTTGAATCCAAATACCATTTCCTCAAGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF760

Protein Analysis

406

Amino Acids

45.87

Weight (kDa)

5.54

Isoelectric Point (pI)

56.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF760 PF05542 184 - 257 2.8e-18 Protein of unknown function (DUF760)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014092)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32160
fragaria_vesca FvH4_5g23190
malus_domestica MD06G1027100.v1.1 MD16G1279100.v1.1
prunus_persica Prupe.5G027900_v2.0.a1 Prupe.5G027900_v2.0.a1
pyrus_communis pycom06g02220
rosa_chinensis RchiOBHm_Chr7g0212111
rosa_laevigata RLG00000002934
rosa_multiflora Rmu_sc0002283.1_g000040
rosa_roxburghii Rroxscaffold_3G00247130
rosa_rugosa Rorug07G0131000
rosa_samantha Rh7AG264000 Rh7BG257700 Rh7CG280500 Rh7DG270500
rosa_wichuraiana Rw7G022530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 647
AccI GTMKAC 1 cut(s) 741
AccII CGCG 2 cut(s) 344, 899
AciI CCGC 3 cut(s) 342, 344, 587
AclWI GGATC 1 cut(s) 878
AcoI YGGCCR 1 cut(s) 548
AcsI RAATTY 2 cut(s) 71, 335
AcuI CTGAAG 5 cut(s) 180, 429, 504, 606, 959
AfaI GTAC 2 cut(s) 154, 468
AfiI CCNNNNNNNGG 5 cut(s) 140, 647, 807, 841, 861
AgsI TTSAA 4 cut(s) 43, 251, 869, 1193
AjuI GAANNNNNNNTTGG 1 cut(s) 1190
Alw26I GTCTC 4 cut(s) 360, 627, 1113, 1123
AlwI GGATC 1 cut(s) 878
Ama87I CYCGRG 2 cut(s) 329, 1067
AoxI GGCC 1 cut(s) 548
ApeKI GCWGC 3 cut(s) 18, 325, 704
ApoI RAATTY 2 cut(s) 71, 335
Asp700I GAANNNNTTC 1 cut(s) 576
AspLEI GCGC 1 cut(s) 1039
AspS9I GGNCC 3 cut(s) 638, 650, 844
AsuC2I CCSGG 1 cut(s) 848
AsuII TTCGAA 1 cut(s) 813
AvaI CYCGRG 2 cut(s) 329, 1067
AvaII GGWCC 3 cut(s) 638, 650, 844
BarI GAAGNNNNNNTAC 2 cut(s) 136, 168
BbsI GAAGAC 2 cut(s) 366, 612
BbvI GCAGC 3 cut(s) 30, 337, 691
BccI CCATC 2 cut(s) 17, 1067
BciVI GTATCC 3 cut(s) 140, 961, 1056
BclI TGATCA 1 cut(s) 858
BcnI CCSGG 1 cut(s) 848
BcoDI GTCTC 4 cut(s) 360, 627, 1113, 1123
BfaI CTAG 1 cut(s) 689
BfmI CTRYAG 2 cut(s) 258, 663
BfoI RGCGCY 1 cut(s) 1040
BfuI GTATCC 3 cut(s) 140, 961, 1056
BisI GCNGC 4 cut(s) 19, 326, 342, 705
BlsI GCNGC 4 cut(s) 20, 327, 343, 706
Bme1390I CCNGG 1 cut(s) 848
Bme18I GGWCC 3 cut(s) 638, 650, 844
BmeT110I CYCGRG 2 cut(s) 329, 1067
BmgT120I GGNCC 3 cut(s) 638, 650, 844
BmiI GGNNCC 2 cut(s) 845, 846
BmrFI CCNGG 1 cut(s) 848
BmsI GCATC 2 cut(s) 104, 580
BpiI GAAGAC 2 cut(s) 366, 612
Bpu14I TTCGAA 1 cut(s) 813
BpuEI CTTGAG 2 cut(s) 779, 1196
BpuMI CCSGG 1 cut(s) 848
BsaAI YACGTR 1 cut(s) 954
BsaBI GATNNNNATC 1 cut(s) 940
BsaJI CCNNGG 3 cut(s) 22, 342, 503
BsaWI WCCGGW 1 cut(s) 1051
BsaXI ACNNNNNCTCC 2 cut(s) 38, 68
Bsc4I CCNNNNNNNGG 5 cut(s) 140, 647, 807, 841, 861
Bse8I GATNNNNATC 1 cut(s) 940
BseDI CCNNGG 3 cut(s) 22, 342, 503
BseGI GGATG 3 cut(s) 292, 595, 1078
BseJI GATNNNNATC 1 cut(s) 940
BseLI CCNNNNNNNGG 5 cut(s) 140, 647, 807, 841, 861
BseMII CTCAG 5 cut(s) 122, 745, 783, 1046, 1103
BseRI GAGGAG 1 cut(s) 219
BseXI GCAGC 3 cut(s) 30, 337, 691
BseYI CCCAGC 1 cut(s) 526
Bsh1236I CGCG 2 cut(s) 344, 899
Bsh1285I CGRYCG 1 cut(s) 1052
BshFI GGCC 1 cut(s) 550
BsiEI CGRYCG 1 cut(s) 1052
BsiHKCI CYCGRG 2 cut(s) 329, 1067
BsiSI CCGG 2 cut(s) 848, 1052
BslFI GGGAC 1 cut(s) 857
BslI CCNNNNNNNGG 5 cut(s) 140, 647, 807, 841, 861
BsmAI GTCTC 4 cut(s) 360, 627, 1113, 1123
BsmBI CGTCTC 1 cut(s) 627
BsmFI GGGAC 1 cut(s) 857
BsnI GGCC 1 cut(s) 550
BsoBI CYCGRG 2 cut(s) 329, 1067
Bsp119I TTCGAA 1 cut(s) 813
Bsp143I GATC 4 cut(s) 447, 858, 883, 941
Bsp19I CCATGG 1 cut(s) 22
BspACI CCGC 3 cut(s) 342, 344, 587
BspANI GGCC 1 cut(s) 550
BspCNI CTCAG 5 cut(s) 121, 744, 784, 1045, 1104
BspFNI CGCG 2 cut(s) 344, 899
BspLI GGNNCC 2 cut(s) 845, 846
BspPI GGATC 1 cut(s) 878
BspT104I TTCGAA 1 cut(s) 813
BssECI CCNNGG 3 cut(s) 22, 342, 503
BssMI GATC 4 cut(s) 447, 858, 883, 941
BssT1I CCWWGG 1 cut(s) 22
Bst4CI ACNGT 4 cut(s) 187, 316, 458, 810
Bst6I CTCTTC 2 cut(s) 555, 730
BstBAI YACGTR 1 cut(s) 954
BstBI TTCGAA 1 cut(s) 813
BstC8I GCNNGC 1 cut(s) 6
BstDEI CTNAG 6 cut(s) 108, 284, 731, 792, 1032, 1112
BstDSI CCRYGG 2 cut(s) 22, 342
BstENI CCTNNNNNAGG 1 cut(s) 859
BstF5I GGATG 3 cut(s) 292, 595, 1078
BstFNI CGCG 2 cut(s) 344, 899
BstH2I RGCGCY 1 cut(s) 1040
BstHHI GCGC 1 cut(s) 1039
BstKTI GATC 4 cut(s) 450, 861, 886, 944
BstMAI GTCTC 4 cut(s) 360, 627, 1113, 1123
BstMBI GATC 4 cut(s) 447, 858, 883, 941
BstMCI CGRYCG 1 cut(s) 1052
BstMWI GCNNNNNNNGC 4 cut(s) 24, 233, 274, 710
BstSCI CCNGG 1 cut(s) 846
BstSFI CTRYAG 2 cut(s) 258, 663
BstSNI TACGTA 1 cut(s) 954
BstUI CGCG 2 cut(s) 344, 899
BstV1I GCAGC 3 cut(s) 30, 337, 691
BstV2I GAAGAC 2 cut(s) 366, 612
BsuI GTATCC 3 cut(s) 140, 961, 1056
BsuRI GGCC 1 cut(s) 550
BtgI CCRYGG 2 cut(s) 22, 342
BtgZI GCGATG 1 cut(s) 1145
BtsCI GGATG 3 cut(s) 292, 595, 1078
BtsIMutI CAGTG 1 cut(s) 192
Cac8I GCNNGC 1 cut(s) 6
CfoI GCGC 1 cut(s) 1039
Cfr13I GGNCC 3 cut(s) 638, 650, 844
Cfr42I CCGCGG 1 cut(s) 345
Csp6I GTAC 2 cut(s) 153, 467
CviAII CATG 3 cut(s) 23, 769, 1009
CviQI GTAC 2 cut(s) 153, 467
DdeI CTNAG 6 cut(s) 108, 284, 731, 792, 1032, 1112
DpnI GATC 4 cut(s) 449, 860, 885, 943
DpnII GATC 4 cut(s) 447, 858, 883, 941
EaeI YGGCCR 1 cut(s) 548
Eam1104I CTCTTC 2 cut(s) 555, 730
EarI CTCTTC 2 cut(s) 555, 730
Eco105I TACGTA 1 cut(s) 954
Eco130I CCWWGG 1 cut(s) 22
Eco32I GATATC 1 cut(s) 405
Eco47I GGWCC 3 cut(s) 638, 650, 844
Eco57I CTGAAG 5 cut(s) 180, 429, 504, 606, 959
Eco88I CYCGRG 2 cut(s) 329, 1067
EcoNI CCTNNNNNAGG 1 cut(s) 859
EcoO109I RGGNCCY 1 cut(s) 844
EcoRV GATATC 1 cut(s) 405
EcoT14I CCWWGG 1 cut(s) 22
ErhI CCWWGG 1 cut(s) 22
Esp3I CGTCTC 1 cut(s) 627
FaeI CATG 3 cut(s) 26, 772, 1012
FaqI GGGAC 1 cut(s) 857
FatI CATG 3 cut(s) 22, 768, 1008
FauNDI CATATG 1 cut(s) 946
FbaI TGATCA 1 cut(s) 858
FblI GTMKAC 1 cut(s) 741
Fnu4HI GCNGC 4 cut(s) 19, 326, 342, 705
FokI GGATG 3 cut(s) 279, 602, 1085
Fsp4HI GCNGC 4 cut(s) 19, 326, 342, 705
FspBI CTAG 1 cut(s) 689
GlaI GCGC 1 cut(s) 1038
GluI GCNGC 4 cut(s) 19, 326, 342, 705
GsaI CCCAGC 1 cut(s) 530
HaeII RGCGCY 1 cut(s) 1040
HaeIII GGCC 1 cut(s) 550
HapII CCGG 2 cut(s) 848, 1052
HhaI GCGC 1 cut(s) 1039
Hin1II CATG 3 cut(s) 26, 772, 1012
Hin6I GCGC 1 cut(s) 1037
HinP1I GCGC 1 cut(s) 1037
HindIII AAGCTT 1 cut(s) 137
HpaII CCGG 2 cut(s) 848, 1052
Hpy166II GTNNAC 2 cut(s) 469, 742
Hpy188III TCNNGA 7 cut(s) 198, 331, 557, 598, 862, 887, 1122
Hpy8I GTNNAC 2 cut(s) 469, 742
Hpy99I CGWCG 1 cut(s) 1100
HpyAV CCTTC 5 cut(s) 73, 93, 105, 110, 831
HpyCH4III ACNGT 4 cut(s) 187, 316, 458, 810
HpyCH4IV ACGT 4 cut(s) 430, 953, 994, 1188
HpyCH4V TGCA 1 cut(s) 4
HpyF10VI GCNNNNNNNGC 4 cut(s) 24, 233, 274, 710
HpyF3I CTNAG 6 cut(s) 108, 284, 731, 792, 1032, 1112
HpySE526I ACGT 4 cut(s) 430, 953, 994, 1188
Hsp92II CATG 3 cut(s) 26, 772, 1012
HspAI GCGC 1 cut(s) 1037
KflI GGGWCCC 1 cut(s) 844
Ksp22I TGATCA 1 cut(s) 858
KspI CCGCGG 1 cut(s) 345
Kzo9I GATC 4 cut(s) 447, 858, 883, 941
LmnI GCTCC 3 cut(s) 232, 241, 274
Lsp1109I GCAGC 3 cut(s) 30, 337, 691
LweI GCATC 2 cut(s) 104, 580
MaeI CTAG 1 cut(s) 689
MaeII ACGT 4 cut(s) 430, 953, 994, 1188
MaeIII GTNAC 5 cut(s) 181, 310, 611, 949, 1184
MalI GATC 4 cut(s) 449, 860, 885, 943
MboI GATC 4 cut(s) 447, 858, 883, 941
MluCI AATT 2 cut(s) 71, 335
MlyI GAGTC 6 cut(s) 362, 619, 929, 956, 1006, 1024
MroXI GAANNNNTTC 1 cut(s) 576
MseI TTAA 2 cut(s) 510, 656
MspA1I CMGCKG 1 cut(s) 344
MspI CCGG 2 cut(s) 848, 1052
MspR9I CCNGG 1 cut(s) 848
MvnI CGCG 2 cut(s) 344, 899
MwoI GCNNNNNNNGC 4 cut(s) 24, 233, 274, 710
NciI CCSGG 1 cut(s) 848
NcoI CCATGG 1 cut(s) 22
NdeI CATATG 1 cut(s) 946
NdeII GATC 4 cut(s) 447, 858, 883, 941
NlaIII CATG 3 cut(s) 26, 772, 1012
NlaIV GGNNCC 2 cut(s) 845, 846
NmuCI GTSAC 1 cut(s) 611
NspV TTCGAA 1 cut(s) 813
PaeR7I CTCGAG 2 cut(s) 329, 1067
PdmI GAANNNNTTC 1 cut(s) 576
PflMI CCANNNNNTGG 1 cut(s) 647
PkrI GCNGC 4 cut(s) 20, 327, 343, 706
PleI GAGTC 6 cut(s) 361, 618, 928, 956, 1006, 1024
PpsI GAGTC 6 cut(s) 361, 618, 928, 956, 1006, 1024
Ppu21I YACGTR 1 cut(s) 954
PpuMI RGGWCCY 1 cut(s) 844
Psp5II RGGWCCY 1 cut(s) 844
PspFI CCCAGC 1 cut(s) 526
PspN4I GGNNCC 2 cut(s) 845, 846
PspPI GGNCC 3 cut(s) 638, 650, 844
PspPPI RGGWCCY 1 cut(s) 844
PspXI VCTCGAGB 1 cut(s) 1067
RsaI GTAC 2 cut(s) 154, 468
RsaNI GTAC 2 cut(s) 153, 467
SacII CCGCGG 1 cut(s) 345
SaqAI TTAA 2 cut(s) 510, 656
SatI GCNGC 4 cut(s) 19, 326, 342, 705
Sau3AI GATC 4 cut(s) 447, 858, 883, 941
Sau96I GGNCC 3 cut(s) 638, 650, 844
SchI GAGTC 6 cut(s) 362, 619, 929, 956, 1006, 1024
ScrFI CCNGG 1 cut(s) 848
SfaNI GCATC 2 cut(s) 104, 580
SfcI CTRYAG 2 cut(s) 258, 663
Sfr274I CTCGAG 2 cut(s) 329, 1067
Sfr303I CCGCGG 1 cut(s) 345
SfuI TTCGAA 1 cut(s) 813
SgrBI CCGCGG 1 cut(s) 345
SinI GGWCC 3 cut(s) 638, 650, 844
SlaI CTCGAG 2 cut(s) 329, 1067
SmlI CTYRAG 4 cut(s) 329, 758, 1067, 1211
SmoI CTYRAG 4 cut(s) 329, 758, 1067, 1211
SnaBI TACGTA 1 cut(s) 954
Sse9I AATT 2 cut(s) 71, 335
SsiI CCGC 3 cut(s) 342, 344, 587
SspMI CTAG 1 cut(s) 689
StyD4I CCNGG 1 cut(s) 846
StyI CCWWGG 1 cut(s) 22
TaaI ACNGT 4 cut(s) 187, 316, 458, 810
TaiI ACGT 4 cut(s) 433, 956, 997, 1191
TaqI TCGA 7 cut(s) 318, 330, 570, 597, 813, 1068, 1083
TasI AATT 2 cut(s) 71, 335
TauI GCSGC 1 cut(s) 344
Tru1I TTAA 2 cut(s) 510, 656
Tru9I TTAA 2 cut(s) 510, 656
TscAI CASTG 1 cut(s) 192
TseFI GTSAC 1 cut(s) 611
TseI GCWGC 3 cut(s) 18, 325, 704
Tsp45I GTSAC 1 cut(s) 611
TspDTI ATGAA 4 cut(s) 219, 785, 906, 927
TspGWI ACGGA 3 cut(s) 550, 642, 651
TspRI CASTG 1 cut(s) 192
Van91I CCANNNNNTGG 1 cut(s) 647
VpaK11BI GGWCC 3 cut(s) 638, 650, 844
XagI CCTNNNNNAGG 1 cut(s) 859
XapI RAATTY 2 cut(s) 71, 335
XhoI CTCGAG 2 cut(s) 329, 1067
XmiI GTMKAC 1 cut(s) 741
XmnI GAANNNNTTC 1 cut(s) 576
XspI CTAG 1 cut(s) 689
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.