Prupe.5G027900_v2.0.a1

Protein of unknown function (DUF760)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0014092
Physical Location & Seq
Reverse (-)
3247799 .. 3254719
6921 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G027900.2

Sequence Viewer

Length: 1218 bp
ATGCAGGTTTCAGGTGTTATTGGCGACGTTTCGTTGGTGATTCCCTCAGGCGGTGGTCTTAGCTGGCCAGAATTCAGACACTTCCATTCGCATACGCTCTCTAACTCCAAGCCATTTCTTTCTGGTGCTTTTTTCAGAAGCTGTCCTTCATCTTGCATCCCAAAGCTGGGAAACGGACTGTATAAGTGCCGAGCAAGAGGGTTGATTGTGAGAGCATCAAAGGATTCAAGTGATAATTTGGTGCCAGTTGCTCCCCTTCAATTTGAATCCCCCGCCGGCCAGCTTTTGGCCCAAATATTGCAAAATCATCCACATCTACTATCTGCAGCCATTGATCAGCAGCTTGAGAACCTTCAAAAAGATAGAGATGCCCGGAGAGAAGAAACTTCTGCTTCATCTGCAGATCCCCTCTACAAGCGAATAGCTCAAGTCAAAGAGAAAGAAAGACGCATGGCATTGGAAGAGATAATATACTGCTTGATAGTGCAGAAATTCATAGAGAATGATATTTCAATGATCCCTAAGATATCAGCGACCTCAGATCCCACTGGAAGAGTGGATTTCTGGCCAATGCAAGAAAAGAAACTAGAATCTGTTCATTCTCCTGAAGCATTGGAGATGATACAGAGCCACTTATCCCTTGTACTTGGAGAGCGACTTGTGGGCCCTCTTTCTGCGATCGTTGAGATTAGCAAAATCAAACTTGGAAAGTTGTATGCTGCTTCAATAATGTACGGATATTTTCTCAAGAGAGTTGATCAGCGGTTTCAGCTTGAGAGAACCATGAACACCCTTCCTGATGGTTTCACTCCAGACGCAGCACCAGCAAACCAGCTATGGGATCCGGATTCCTTGATCCGGATACCTCCAGACGGTGGTAGTGATAGTGATGGAGGTAGTTACATGAACAATGGTGATGACAAGTCCTATCGACTGAGATCCTATGTGATGTACTTGGATGCAGAGACTCTCCAGAGATACGCTACTATAAGATCAAAGGAAGCGATTTCTTTGATTGAAAATCAGACACAAGCACTATTTGGGAGGCCTGACATCAGGATTACTGAGGATGGTTCAATCGATGCCTCTAACGATGAAGTAATTGCGCTTACTTTCTCTGGATTGACAATGCTTGTCTTGGAAGCTGTTGCTTTCGGATCATTCCTATGGGATGCTGAAACCTACATTGAATCCAATTATCACTTTCTCAAAAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF760

Protein Analysis

406

Amino Acids

45.1

Weight (kDa)

5.49

Isoelectric Point (pI)

42.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014092)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32160
fragaria_vesca FvH4_5g23190
malus_domestica MD06G1027100.v1.1 MD16G1279100.v1.1
prunus_persica Prupe.5G027900_v2.0.a1 Prupe.5G027900_v2.0.a1
pyrus_communis pycom06g02220
rosa_chinensis RchiOBHm_Chr7g0212111
rosa_laevigata RLG00000002934
rosa_multiflora Rmu_sc0002283.1_g000040
rosa_roxburghii Rroxscaffold_3G00247130
rosa_rugosa Rorug07G0131000
rosa_samantha Rh7AG264000 Rh7BG257700 Rh7CG280500 Rh7DG270500
rosa_wichuraiana Rw7G022530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 241
AccB7I CCANNNNNTGG 2 cut(s) 286, 875
AccIII TCCGGA 2 cut(s) 844, 858
AciI CCGC 3 cut(s) 51, 273, 763
AclWI GGATC 8 cut(s) 398, 511, 536, 836, 849, 850, 933, 1165
AcoI YGGCCR 3 cut(s) 65, 277, 566
AcsI RAATTY 2 cut(s) 71, 491
AcuI CTGAAG 1 cut(s) 627
AfaI GTAC 3 cut(s) 645, 734, 953
AfiI CCNNNNNNNGG 8 cut(s) 50, 166, 167, 286, 838, 858, 872, 875
AgsI TTSAA 9 cut(s) 228, 260, 266, 356, 513, 726, 1019, 1077, 1190
Alw26I GTCTC 1 cut(s) 959
AlwI GGATC 8 cut(s) 398, 511, 536, 836, 849, 850, 933, 1165
AlwNI CAGNNNCTG 1 cut(s) 141
Aor13HI TCCGGA 2 cut(s) 844, 858
AoxI GGCC 6 cut(s) 65, 277, 288, 566, 664, 1046
ApaI GGGCCC 1 cut(s) 668
ApeKI GCWGC 4 cut(s) 326, 340, 719, 818
ApoI RAATTY 2 cut(s) 71, 491
Asp700I GAANNNNTTC 1 cut(s) 594
AspLEI GCGC 1 cut(s) 1108
AspS9I GGNCC 3 cut(s) 289, 664, 665
AsuC2I CCSGG 1 cut(s) 373
AsuHPI GGTGA 2 cut(s) 49, 926
AxyI CCTNAGG 1 cut(s) 46
BaeGI GKGCMC 1 cut(s) 668
BalI TGGCCA 2 cut(s) 67, 568
BamHI GGATCC 1 cut(s) 841
BanI GGYRCC 1 cut(s) 241
BanII GRGCYC 1 cut(s) 668
BbvI GCAGC 4 cut(s) 338, 352, 706, 830
BccI CCATC 3 cut(s) 794, 884, 1064
BciVI GTATCC 1 cut(s) 855
BclI TGATCA 2 cut(s) 334, 757
BcnI CCSGG 1 cut(s) 373
BcoDI GTCTC 1 cut(s) 959
BfaI CTAG 1 cut(s) 587
BfmI CTRYAG 2 cut(s) 324, 399
BfuI GTATCC 1 cut(s) 855
BisI GCNGC 4 cut(s) 327, 341, 720, 819
BlsI GCNGC 4 cut(s) 328, 342, 721, 820
Bme1390I CCNGG 1 cut(s) 373
BmgT120I GGNCC 3 cut(s) 289, 664, 665
BmiI GGNNCC 3 cut(s) 243, 666, 843
BmrFI CCNGG 1 cut(s) 373
BmsI GCATC 6 cut(s) 165, 224, 358, 949, 1072, 1162
BpmI CTGGAG 3 cut(s) 795, 852, 956
BpuEI CTTGAG 4 cut(s) 365, 411, 731, 794
BpuMI CCSGG 1 cut(s) 373
Bsa29I ATCGAT 1 cut(s) 1080
BsaWI WCCGGW 2 cut(s) 844, 858
Bsc4I CCNNNNNNNGG 8 cut(s) 50, 166, 167, 286, 838, 858, 872, 875
Bse118I RCCGGY 1 cut(s) 275
Bse1I ACTGG 2 cut(s) 245, 553
Bse21I CCTNAGG 1 cut(s) 46
BseAI TCCGGA 2 cut(s) 844, 858
BseCI ATCGAT 1 cut(s) 1080
BseGI GGATG 5 cut(s) 156, 307, 964, 1075, 1177
BseLI CCNNNNNNNGG 8 cut(s) 50, 166, 167, 286, 838, 858, 872, 875
BseMII CTCAG 4 cut(s) 60, 552, 926, 1056
BseNI ACTGG 2 cut(s) 245, 553
BseSI GKGCMC 1 cut(s) 668
BseXI GCAGC 4 cut(s) 338, 352, 706, 830
BseYI CCCAGC 1 cut(s) 166
BsgI GTGCAG 1 cut(s) 506
Bsh1285I CGRYCG 1 cut(s) 681
BshFI GGCC 6 cut(s) 67, 279, 290, 568, 666, 1048
BshNI GGYRCC 1 cut(s) 241
BshVI ATCGAT 1 cut(s) 1080
BsiEI CGRYCG 1 cut(s) 681
BsiSI CCGG 4 cut(s) 276, 373, 845, 859
BslI CCNNNNNNNGG 8 cut(s) 50, 166, 167, 286, 838, 858, 872, 875
BsmAI GTCTC 1 cut(s) 959
BsnI GGCC 6 cut(s) 67, 279, 290, 568, 666, 1048
Bsp120I GGGCCC 1 cut(s) 664
Bsp1286I GDGCHC 1 cut(s) 668
Bsp13I TCCGGA 2 cut(s) 844, 858
BspACI CCGC 3 cut(s) 51, 273, 763
BspANI GGCC 6 cut(s) 67, 279, 290, 568, 666, 1048
BspCNI CTCAG 4 cut(s) 59, 551, 927, 1057
BspDI ATCGAT 1 cut(s) 1080
BspEI TCCGGA 2 cut(s) 844, 858
BspLI GGNNCC 3 cut(s) 243, 666, 843
BspMAI CTGCAG 2 cut(s) 328, 403
BspPI GGATC 8 cut(s) 398, 511, 536, 836, 849, 850, 933, 1165
BspT107I GGYRCC 1 cut(s) 241
BsrFI RCCGGY 1 cut(s) 275
BsrI ACTGG 2 cut(s) 245, 553
BssAI RCCGGY 1 cut(s) 275
Bst4CI ACNGT 2 cut(s) 180, 875
Bst6I CTCTTC 2 cut(s) 456, 547
BstC8I GCNNGC 3 cut(s) 65, 277, 281
BstDEI CTNAG 6 cut(s) 46, 59, 522, 538, 935, 1065
BstF5I GGATG 5 cut(s) 156, 307, 964, 1075, 1177
BstHHI GCGC 1 cut(s) 1108
BstMAI GTCTC 1 cut(s) 959
BstMCI CGRYCG 1 cut(s) 681
BstMWI GCNNNNNNNGC 3 cut(s) 398, 769, 824
BstSCI CCNGG 1 cut(s) 371
BstSFI CTRYAG 2 cut(s) 324, 399
BstSLI GKGCMC 1 cut(s) 668
BstV1I GCAGC 4 cut(s) 338, 352, 706, 830
BstX2I RGATCY 4 cut(s) 403, 541, 841, 938
BstYI RGATCY 4 cut(s) 403, 541, 841, 938
Bsu15I ATCGAT 1 cut(s) 1080
Bsu36I CCTNAGG 1 cut(s) 46
BsuI GTATCC 1 cut(s) 855
BsuRI GGCC 6 cut(s) 67, 279, 290, 568, 666, 1048
BsuTUI ATCGAT 1 cut(s) 1080
BtsCI GGATG 5 cut(s) 156, 307, 964, 1075, 1177
BtsIMutI CAGTG 1 cut(s) 546
Cac8I GCNNGC 3 cut(s) 65, 277, 281
CaiI CAGNNNCTG 1 cut(s) 141
CfoI GCGC 1 cut(s) 1108
Cfr10I RCCGGY 1 cut(s) 275
Cfr13I GGNCC 3 cut(s) 289, 664, 665
ClaI ATCGAT 1 cut(s) 1080
CseI GACGC 2 cut(s) 456, 824
Csp6I GTAC 3 cut(s) 644, 733, 952
CviAII CATG 3 cut(s) 451, 784, 904
CviQI GTAC 3 cut(s) 644, 733, 952
DdeI CTNAG 6 cut(s) 46, 59, 522, 538, 935, 1065
EaeI YGGCCR 3 cut(s) 65, 277, 566
Eam1104I CTCTTC 2 cut(s) 456, 547
EarI CTCTTC 2 cut(s) 456, 547
Eco147I AGGCCT 1 cut(s) 1048
Eco24I GRGCYC 1 cut(s) 668
Eco32I GATATC 1 cut(s) 528
Eco57I CTGAAG 1 cut(s) 627
Eco81I CCTNAGG 1 cut(s) 46
EcoO109I RGGNCCY 1 cut(s) 665
EcoRI GAATTC 1 cut(s) 71
EcoRV GATATC 1 cut(s) 528
EcoT38I GRGCYC 1 cut(s) 668
FaeI CATG 3 cut(s) 454, 787, 907
FalI AAGNNNNNCTT 2 cut(s) 130, 162
FatI CATG 3 cut(s) 450, 783, 903
FauI CCCGC 1 cut(s) 280
FbaI TGATCA 2 cut(s) 334, 757
Fnu4HI GCNGC 4 cut(s) 327, 341, 720, 819
FokI GGATG 5 cut(s) 143, 294, 971, 1082, 1184
FriOI GRGCYC 1 cut(s) 668
Fsp4HI GCNGC 4 cut(s) 327, 341, 720, 819
FspBI CTAG 1 cut(s) 587
GlaI GCGC 1 cut(s) 1107
GluI GCNGC 4 cut(s) 327, 341, 720, 819
GsaI CCCAGC 1 cut(s) 170
GsuI CTGGAG 3 cut(s) 795, 852, 956
HaeIII GGCC 6 cut(s) 67, 279, 290, 568, 666, 1048
HapII CCGG 4 cut(s) 276, 373, 845, 859
HgaI GACGC 2 cut(s) 456, 824
HhaI GCGC 1 cut(s) 1108
Hin1II CATG 3 cut(s) 454, 787, 907
Hin6I GCGC 1 cut(s) 1106
HinP1I GCGC 1 cut(s) 1106
HinfI GANTC 7 cut(s) 40, 224, 266, 590, 848, 967, 1190
HpaII CCGG 4 cut(s) 276, 373, 845, 859
HphI GGTGA 2 cut(s) 49, 926
Hpy188I TCNGA 5 cut(s) 77, 137, 541, 1026, 1157
Hpy99I CGWCG 1 cut(s) 29
HpyAV CCTTC 4 cut(s) 156, 266, 362, 803
HpyCH4III ACNGT 2 cut(s) 180, 875
HpyCH4IV ACGT 1 cut(s) 27
HpyCH4V TGCA 8 cut(s) 4, 156, 301, 326, 401, 487, 574, 962
HpyF10VI GCNNNNNNNGC 3 cut(s) 398, 769, 824
HpyF3I CTNAG 6 cut(s) 46, 59, 522, 538, 935, 1065
HpySE526I ACGT 1 cut(s) 27
Hsp92II CATG 3 cut(s) 454, 787, 907
HspAI GCGC 1 cut(s) 1106
Kpn2I TCCGGA 2 cut(s) 844, 858
KroI GCCGGC 1 cut(s) 275
KroNI GCCGGC 1 cut(s) 277
Ksp22I TGATCA 2 cut(s) 334, 757
LmnI GCTCC 1 cut(s) 256
Lsp1109I GCAGC 4 cut(s) 338, 352, 706, 830
LweI GCATC 6 cut(s) 165, 224, 358, 949, 1072, 1162
MaeI CTAG 1 cut(s) 587
MaeII ACGT 1 cut(s) 27
MaeIII GTNAC 1 cut(s) 899
MboII GAAGA 3 cut(s) 392, 473, 564
MflI RGATCY 4 cut(s) 403, 541, 841, 938
MhlI GDGCHC 1 cut(s) 668
MlsI TGGCCA 2 cut(s) 67, 568
MluCI AATT 6 cut(s) 71, 235, 260, 491, 1101, 1195
MluNI TGGCCA 2 cut(s) 67, 568
MlyI GAGTC 1 cut(s) 961
Mox20I TGGCCA 2 cut(s) 67, 568
MroI TCCGGA 2 cut(s) 844, 858
MroNI GCCGGC 1 cut(s) 275
MroXI GAANNNNTTC 1 cut(s) 594
MscI TGGCCA 2 cut(s) 67, 568
MslI CAYNNNNRTG 1 cut(s) 1165
Msp20I TGGCCA 2 cut(s) 67, 568
MspA1I CMGCKG 1 cut(s) 763
MspI CCGG 4 cut(s) 276, 373, 845, 859
MspR9I CCNGG 1 cut(s) 373
MwoI GCNNNNNNNGC 3 cut(s) 398, 769, 824
NaeI GCCGGC 1 cut(s) 277
NciI CCSGG 1 cut(s) 373
NgoMIV GCCGGC 1 cut(s) 275
NlaIII CATG 3 cut(s) 454, 787, 907
NlaIV GGNNCC 3 cut(s) 243, 666, 843
NmeAIII GCCGAG 1 cut(s) 215
PceI AGGCCT 1 cut(s) 1048
PdiI GCCGGC 1 cut(s) 277
PdmI GAANNNNTTC 1 cut(s) 594
PfeI GAWTC 6 cut(s) 40, 224, 266, 590, 848, 1190
PflMI CCANNNNNTGG 2 cut(s) 286, 875
PkrI GCNGC 4 cut(s) 328, 342, 721, 820
Ple19I CGATCG 1 cut(s) 681
PleI GAGTC 1 cut(s) 961
PpsI GAGTC 1 cut(s) 961
PspFI CCCAGC 1 cut(s) 166
PspN4I GGNNCC 3 cut(s) 243, 666, 843
PspOMI GGGCCC 1 cut(s) 664
PspPI GGNCC 3 cut(s) 289, 664, 665
PstI CTGCAG 2 cut(s) 328, 403
PstNI CAGNNNCTG 1 cut(s) 141
PsuI RGATCY 4 cut(s) 403, 541, 841, 938
PvuI CGATCG 1 cut(s) 681
RsaI GTAC 3 cut(s) 645, 734, 953
RsaNI GTAC 3 cut(s) 644, 733, 952
RseI CAYNNNNRTG 1 cut(s) 1165
SatI GCNGC 4 cut(s) 327, 341, 720, 819
Sau96I GGNCC 3 cut(s) 289, 664, 665
SchI GAGTC 1 cut(s) 961
ScrFI CCNGG 1 cut(s) 373
SduI GDGCHC 1 cut(s) 668
SfaNI GCATC 6 cut(s) 165, 224, 358, 949, 1072, 1162
SfcI CTRYAG 2 cut(s) 324, 399
SmiMI CAYNNNNRTG 1 cut(s) 1165
SmlI CTYRAG 4 cut(s) 344, 426, 746, 773
SmoI CTYRAG 4 cut(s) 344, 426, 746, 773
Sse9I AATT 6 cut(s) 71, 235, 260, 491, 1101, 1195
SseBI AGGCCT 1 cut(s) 1048
SsiI CCGC 3 cut(s) 51, 273, 763
SspI AATATT 1 cut(s) 297
SspMI CTAG 1 cut(s) 587
StuI AGGCCT 1 cut(s) 1048
StyD4I CCNGG 1 cut(s) 371
TaaI ACNGT 2 cut(s) 180, 875
TaiI ACGT 1 cut(s) 30
TaqI TCGA 2 cut(s) 931, 1080
TasI AATT 6 cut(s) 71, 235, 260, 491, 1101, 1195
TatI WGTACW 2 cut(s) 643, 951
TfiI GAWTC 6 cut(s) 40, 224, 266, 590, 848, 1190
TscAI CASTG 1 cut(s) 553
TseI GCWGC 4 cut(s) 326, 340, 719, 818
TspDTI ATGAA 7 cut(s) 138, 384, 484, 587, 800, 920, 1110
TspGWI ACGGA 2 cut(s) 189, 750
TspRI CASTG 1 cut(s) 553
Van91I CCANNNNNTGG 2 cut(s) 286, 875
XapI RAATTY 2 cut(s) 71, 491
XcmI CCANNNNNNNNNTGG 1 cut(s) 553
XmnI GAANNNNTTC 1 cut(s) 594
XspI CTAG 1 cut(s) 587
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.