Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012180

Physical Location & Seq

Genomic Coordinates Forward (+)

11695596 .. 11697964

Gene Structure 2369 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G32415.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2286 bp

ATGCGAGCTCTCTGTGTAAAGAAAGTTTGTGGCTTTCTCTCAAAATTATCTCTCAGATCTTCAATATCTTGTCGTCGATACTATGGAGATAAGATACCGAATTACGGAAGCTATCGTCGAGGTTTCTCTAATGAAGAAGCTCTTATACTTCGTCGTTTATCTGAGGGAGGTCTTGTACATGCACGCCACTTGCTCGACAAAATTCCTCAGAGAGGAAGTATCAACCGTGTTGTTTACTGGACTTCGCTTCTTAGTAAGTACGCGAAAACTGGATACTTGGATGAAGCAAGGGTTTTGTTTGAAGTAATGCCTGAGAGGAATATCGTTACTTGTAATGCGATGTTGACGGGTTATGTTAAATGTAGGAGAATGAATGAGGCTTGGACATTGTTTAGGGAAATGCCGAAGAATGTTGTTTCTTGGACTGTGATGCTTACTGCGCTATGTGACGACGGAAGGAGTGAAGATGCAGTTGAGTTGTTCGATGAAATGCCTGAGAGAAATGTGGTTTCGTGGAACACTTTGGTAACGGGTTTGATTAGGAATGGTGATATGGAGAAGGCAAAACAGGTGTTTGATGCTATGCCTAGTAGAGATGTTGTGTCGTGGAACGCTATGATTAAAGGGTATATTGAGAATGATGGGATGGAGGAAGCGAAACTATTGTTTGGGGATATGAGTGAGAAGAATGTAGTTACTTGGACGAGTATGGTATATGGTTATTGTAGGTATGGAGATGTTCGTGAAGCTTATAGATTGTTCTGTGAAATGCCGGAGAGAAATATCGTTTCTTGGACCGCTATGATTAGTGGGTTTGCTTGGAATGAGTTGTATAGAGAAGCGTTGATGCTTTTTCTTGAAATGAAGAAGGATGTTGATGCAGTATCACCAAATGGTGAGACTCTCATTTCTCTTGCTTATGCTTGTGGTGGTCTTGGTGTTGAATTTCGTCGTCTTGGTGAGCAATTGCACGCACAAGTTATATCTAACGGTTGGGAAACTGTGGATCACGATGGAAGGTTGGCGAAAAGTCTTGTTCATATGTATGCATCATCTGGCTTGATTGCTTCAGCTCAATCTCTGCTTAATGAAAGCTTTGATTTGCAGTCTTGTAACATTATTATCAACCGTTATCTAAAGAACGGGGATTTGGAGCGAGCTGAAACTCTGTTCGAGAGAGTCAAGAGCTTACATGACAAAGTATCTTGGACATCGATGATCGATGGATATCTAGAAGCGGGTGATGTATCCAGGGCCTTTGGTCTGTTTCAGAAACTTCACGACAAAGACGGGGTTACATGGACGGTTATGATCTCAGGTCTTGTCCAAAACGAACTTTTTGCAGAAGCTGCATCCTTACTGTCAGATATGGTGAGATGTGGTCTGAAACCGTTGAACTCGACTTACTCTGTTCTTCTTAGTTCTGCGGGAGCCACATCGAATCTCGATCAAGGGAAGCATATACACTGCGTGATTGCAAAAACCACGGCTTGCTATGATCCTGATCTCATCCTTCAAAACTCTCTTGTCTCTATGTACGCCAAATGCGGAGCCATAGAGGATGCTTATGAGATATTCGCAAAGATGGTTCAGAAAGATACAGTTTCATGGAACTCTATGATCATGGGGTTATCGCATCACGGCTTAGCGGATAAAGCCTTAAATCTGTTCAAAGAGATGCTTGATTCGGGGAAGAAACCGAACTCTGTAACGTTTCTCGGAGTCCTCTCTGCTTGTAGTCACTCTGGACTCATCACCAGAGGTTTAGAACTATTCAAAGCGATGAAAGAAACCTATTCGATCCAGCCCGGAATCGACCATTACATCTCGATGATAGACCTTTTAGGCAGAGCCGGAAAACTAAAAGAAGCAGAGGAATTCATCTCAGCTCTGCCTTTCACTCCAGACCATACAGTCTACGGCGCATTGTTAGGCTTATGCGGACTCAACTGGAGAGATAAAGATGCAGAAGGCATAGCGGAACGAGCTGCAATGCGGTTGCTAGAGCTTGACCCAGTCAATGCACCAGGACATGTGGCGCTATGCAACGTGTATGCGGGACTAGGGAGGCATGATATGGAGAAGGAAATGAGAAAAGAGATGGGAATAAAAGGAGTGAAGAAGACACCAGGATGTAGTTGGGTTGTGGTTAATGGAAGAGCTAATGTGTTTCTCTCTGGTGATAAGTCTGCAAGTGAAGCTGCTCAGATGGTTTTGCCAATCTTTTGTGGTAATGAAATGCTTGAGGAGGAAGAAGAGAAACCGTTGAGTCTATGCCATTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

761

Amino Acids

85.02

Weight (kDa)

6.01

Isoelectric Point (pI)

31.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	106 - 137	2.2e-08	PPR repeat family
PPR	PF01535	109 - 136	3.7e-06	PPR repeat
PPR_2	PF13041	136 - 169	4.9e-08	PPR repeat family
PPR_1	PF12854	137 - 164	3.5e-06	PPR repeat
PPR	PF01535	139 - 169	2.4e-07	PPR repeat
PPR_2	PF13041	167 - 199	3.4e-07	PPR repeat family
PPR_1	PF12854	167 - 195	1e-05	PPR repeat
PPR	PF01535	170 - 199	1.5e-06	PPR repeat
PPR_2	PF13041	198 - 231	1.4e-06	PPR repeat family
PPR_2	PF13041	229 - 262	9.8e-09	PPR repeat family
PPR_1	PF12854	230 - 257	7.5e-09	PPR repeat
PPR	PF01535	232 - 262	7.6e-09	PPR repeat
PPR_2	PF13041	260 - 302	2.1e-06	PPR repeat family
PPR	PF01535	263 - 290	9.2e-07	PPR repeat
PPR_2	PF13041	430 - 474	3e-08	PPR repeat family
PPR	PF01535	432 - 462	6.2e-06	PPR repeat
PPR_2	PF13041	532 - 580	5.9e-12	PPR repeat family
PPR	PF01535	535 - 564	1.1e-08	PPR repeat
E_motif	PF20431	659 - 715	2e-12	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012180)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32415
fragaria_vesca	FvH4_5g21130 FvH4_5g21130 FvH4_5g21130
malus_domestica	MD06G1040900.v1.1
prunus_persica	Prupe.5G047200_v2.0.a1
pyrus_communis	pycom06g03410
rosa_chinensis	RchiOBHm_Chr7g0208251
rosa_laevigata	RLG00000003235
rosa_multiflora	Rmu_sc0000841.1_g000023 Rmu_sc0000841.1_g000024 Rmu_sc0007869.1_g000019
rosa_roxburghii	Rroxscaffold_3G00250640
rosa_rugosa	Rorug07G0102500
rosa_samantha	Rh7AG236700 Rh7BG232300 Rh7CG252600 Rh7DG242700
rosa_wichuraiana	Rw7G020200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1913
AccI	GTMKAC	1 cut(s)	1917
AccII	CGCG	1 cut(s)	263
AciI	CCGC	9 cut(s)	798, 1238, 1427, 1548, 1649, 1941, 1979, 1996, 2057
AclI	AACGTT	1 cut(s)	1712
AclWI	GGATC	3 cut(s)	1014, 1493, 1795
AcsI	RAATTY	3 cut(s)	201, 944, 1877
AcuI	CTGAAG	1 cut(s)	1053
AdeI	CACNNNGTG	1 cut(s)	1471
AfaI	GTAC	3 cut(s)	177, 260, 1538
AfiI	CCNNNNNNNGG	2 cut(s)	104, 212
AflIII	ACRYGT	2 cut(s)	2032, 2049
AgsI	TTSAA	8 cut(s)	63, 302, 860, 944, 1396, 1517, 1672, 1777
AjnI	CCWGG	3 cut(s)	1250, 2026, 2128
AjuI	GAANNNNNNNTTGG	2 cut(s)	1133, 1165
Alw21I	GWGCWC	1 cut(s)	10
Alw26I	GTCTC	2 cut(s)	893, 1534
AlwI	GGATC	3 cut(s)	1014, 1493, 1795
AlwNI	CAGNNNCTG	1 cut(s)	1349
AoxI	GGCC	1 cut(s)	1254
ApeKI	GCWGC	3 cut(s)	1349, 1988, 2201
ApoI	RAATTY	3 cut(s)	201, 944, 1877
AspLEI	GCGC	3 cut(s)	442, 1925, 2041
AspS9I	GGNCC	2 cut(s)	795, 1254
AsuC2I	CCSGG	1 cut(s)	1809
AsuHPI	GGTGA	8 cut(s)	560, 879, 908, 971, 1253, 1384, 1747, 2192
AvaII	GGWCC	1 cut(s)	795
BanII	GRGCYC	1 cut(s)	10
BarI	GAAGNNNNNNTAC	2 cut(s)	129, 161
BbsI	GAAGAC	1 cut(s)	2129
Bbv12I	GWGCWC	1 cut(s)	10
BbvI	GCAGC	3 cut(s)	1336, 1975, 2188
BccI	CCATC	7 cut(s)	635, 640, 1007, 1217, 1579, 2095, 2203
BceAI	ACGGC	3 cut(s)	1503, 1657, 1936
BcgI	CGANNNNNNTGC	2 cut(s)	1322, 1356
BciT130I	CCWGG	3 cut(s)	1252, 2028, 2130
BciVI	GTATCC	2 cut(s)	266, 1258
BclI	TGATCA	1 cut(s)	1620
BcnI	CCSGG	1 cut(s)	1809
BcoDI	GTCTC	2 cut(s)	893, 1534
BfaI	CTAG	4 cut(s)	588, 1232, 2003, 2063
BfoI	RGCGCY	1 cut(s)	2042
BfuI	GTATCC	2 cut(s)	266, 1258
BglII	AGATCT	1 cut(s)	56
BisI	GCNGC	3 cut(s)	1350, 1989, 2202
BlpI	GCTNAGC	1 cut(s)	1645
BlsI	GCNGC	3 cut(s)	1351, 1990, 2203
Bme1390I	CCNGG	4 cut(s)	1252, 1809, 2028, 2130
Bme18I	GGWCC	1 cut(s)	795
BmgT120I	GGNCC	2 cut(s)	795, 1254
BmiI	GGNNCC	2 cut(s)	1432, 1552
BmrFI	CCNGG	4 cut(s)	1252, 1809, 2028, 2130
BmrI	ACTGGG	1 cut(s)	2009
BmuI	ACTGGG	1 cut(s)	2009
BpiI	GAAGAC	1 cut(s)	2129
BpmI	CTGGAG	2 cut(s)	1887, 1972
Bpu1102I	GCTNAGC	1 cut(s)	1645
BpuEI	CTTGAG	1 cut(s)	2264
BpuMI	CCSGG	1 cut(s)	1809
Bsa29I	ATCGAT	2 cut(s)	1214, 1221
BsaBI	GATNNNNATC	2 cut(s)	1227, 1503
BsaJI	CCNNGG	2 cut(s)	1251, 1485
BsaXI	ACNNNNNCTCC	2 cut(s)	159, 189
Bsc4I	CCNNNNNNNGG	2 cut(s)	104, 212
Bse1I	ACTGG	4 cut(s)	242, 274, 1955, 2015
Bse3DI	GCAATG	2 cut(s)	1998, 2278
Bse8I	GATNNNNATC	2 cut(s)	1227, 1503
BseBI	CCWGG	3 cut(s)	1252, 2028, 2130
BseCI	ATCGAT	2 cut(s)	1214, 1221
BseDI	CCNNGG	2 cut(s)	1251, 1485
BseGI	GGATG	7 cut(s)	286, 651, 877, 1352, 1509, 1567, 2138
BseJI	GATNNNNATC	2 cut(s)	1227, 1503
BseLI	CCNNNNNNNGG	2 cut(s)	104, 212
BseMI	GCAATG	2 cut(s)	1998, 2278
BseMII	CTCAG	8 cut(s)	67, 153, 221, 303, 486, 1329, 1899, 2219
BseNI	ACTGG	4 cut(s)	242, 274, 1955, 2015
BseRI	GAGGAG	1 cut(s)	2261
BseXI	GCAGC	3 cut(s)	1336, 1975, 2188
Bsh1236I	CGCG	1 cut(s)	263
BshFI	GGCC	1 cut(s)	1256
BshVI	ATCGAT	2 cut(s)	1214, 1221
BsiHKAI	GWGCWC	1 cut(s)	10
BsiSI	CCGG	3 cut(s)	773, 1809, 1854
BslFI	GGGAC	1 cut(s)	2073
BslI	CCNNNNNNNGG	2 cut(s)	104, 212
BsmAI	GTCTC	2 cut(s)	893, 1534
BsmFI	GGGAC	1 cut(s)	2073
BsnI	GGCC	1 cut(s)	1256
Bsp1286I	GDGCHC	1 cut(s)	10
Bsp1407I	TGTACA	1 cut(s)	175
Bsp143I	GATC	9 cut(s)	56, 1006, 1218, 1311, 1447, 1498, 1504, 1620, 1800
Bsp1720I	GCTNAGC	1 cut(s)	1645
BspACI	CCGC	9 cut(s)	798, 1238, 1427, 1548, 1649, 1941, 1979, 1996, 2057
BspANI	GGCC	1 cut(s)	1256
BspCNI	CTCAG	8 cut(s)	66, 154, 220, 304, 487, 1328, 1898, 2218
BspDI	ATCGAT	2 cut(s)	1214, 1221
BspFNI	CGCG	1 cut(s)	263
BspLI	GGNNCC	2 cut(s)	1432, 1552
BspPI	GGATC	3 cut(s)	1014, 1493, 1795
BspQI	GCTCTTC	1 cut(s)	2152
BsrDI	GCAATG	2 cut(s)	1998, 2278
BsrGI	TGTACA	1 cut(s)	175
BsrI	ACTGG	4 cut(s)	242, 274, 1955, 2015
BssECI	CCNNGG	2 cut(s)	1251, 1485
BssMI	GATC	9 cut(s)	56, 1006, 1218, 1311, 1447, 1498, 1504, 1620, 1800
Bst2UI	CCWGG	3 cut(s)	1252, 2028, 2130
Bst6I	CTCTTC	2 cut(s)	2152, 2250
BstAPI	GCANNNNNTGC	1 cut(s)	1349
BstAUI	TGTACA	1 cut(s)	175
BstC8I	GCNNGC	5 cut(s)	6, 184, 972, 1158, 1492
BstDSI	CCRYGG	1 cut(s)	1485
BstENI	CCTNNNNNAGG	1 cut(s)	210
BstF5I	GGATG	7 cut(s)	286, 651, 877, 1352, 1509, 1567, 2138
BstFNI	CGCG	1 cut(s)	263
BstH2I	RGCGCY	1 cut(s)	2042
BstHHI	GCGC	3 cut(s)	442, 1925, 2041
BstKTI	GATC	9 cut(s)	59, 1009, 1221, 1314, 1450, 1501, 1507, 1623, 1803
BstMAI	GTCTC	2 cut(s)	893, 1534
BstMBI	GATC	9 cut(s)	56, 1006, 1218, 1311, 1447, 1498, 1504, 1620, 1800
BstMWI	GCNNNNNNNGC	5 cut(s)	439, 1349, 1655, 1985, 2198
BstNI	CCWGG	3 cut(s)	1252, 2028, 2130
BstNSI	RCATGY	2 cut(s)	182, 2036
BstSCI	CCNGG	4 cut(s)	1250, 1807, 2026, 2128
BstUI	CGCG	1 cut(s)	263
BstV1I	GCAGC	3 cut(s)	1336, 1975, 2188
BstV2I	GAAGAC	1 cut(s)	2129
BstX2I	RGATCY	1 cut(s)	56
BstYI	RGATCY	1 cut(s)	56
Bsu15I	ATCGAT	2 cut(s)	1214, 1221
BsuI	GTATCC	2 cut(s)	266, 1258
BsuRI	GGCC	1 cut(s)	1256
BsuTUI	ATCGAT	2 cut(s)	1214, 1221
BtgI	CCRYGG	1 cut(s)	1485
BtgZI	GCGATG	2 cut(s)	353, 1796
BtsCI	GGATG	7 cut(s)	286, 651, 877, 1352, 1509, 1567, 2138
BtsI	GCAGTG	1 cut(s)	1465
BtsIMutI	CAGTG	1 cut(s)	1465
Cac8I	GCNNGC	5 cut(s)	6, 184, 972, 1158, 1492
CaiI	CAGNNNCTG	1 cut(s)	1349
CfoI	GCGC	3 cut(s)	442, 1925, 2041
Cfr13I	GGNCC	2 cut(s)	795, 1254
ClaI	ATCGAT	2 cut(s)	1214, 1221
Csp6I	GTAC	3 cut(s)	176, 259, 1537
CviAII	CATG	7 cut(s)	179, 1193, 1299, 1608, 1624, 2033, 2072
CviQI	GTAC	3 cut(s)	176, 259, 1537
DpnI	GATC	9 cut(s)	58, 1008, 1220, 1313, 1449, 1500, 1506, 1622, 1802
DpnII	GATC	9 cut(s)	56, 1006, 1218, 1311, 1447, 1498, 1504, 1620, 1800
DraIII	CACNNNGTG	1 cut(s)	1471
DrdI	GACNNNNNNGTC	1 cut(s)	1913
DseDI	GACNNNNNNGTC	1 cut(s)	1913
Eam1104I	CTCTTC	2 cut(s)	2152, 2250
EarI	CTCTTC	2 cut(s)	2152, 2250
Ecl136II	GAGCTC	1 cut(s)	8
Eco24I	GRGCYC	1 cut(s)	10
Eco32I	GATATC	1 cut(s)	1229
Eco47I	GGWCC	1 cut(s)	795
Eco53kI	GAGCTC	1 cut(s)	8
Eco57I	CTGAAG	1 cut(s)	1053
EcoICRI	GAGCTC	1 cut(s)	8
EcoNI	CCTNNNNNAGG	1 cut(s)	210
EcoO109I	RGGNCCY	1 cut(s)	1254
EcoRI	GAATTC	1 cut(s)	1877
EcoRII	CCWGG	3 cut(s)	1250, 2026, 2128
EcoRV	GATATC	1 cut(s)	1229
EcoT22I	ATGCAT	1 cut(s)	1051
EcoT38I	GRGCYC	1 cut(s)	10
FaeI	CATG	7 cut(s)	182, 1196, 1302, 1611, 1627, 2036, 2075
FalI	AAGNNNNNCTT	4 cut(s)	126, 158, 1665, 1697
FaqI	GGGAC	1 cut(s)	2073
FatI	CATG	7 cut(s)	178, 1192, 1298, 1607, 1623, 2032, 2071
FauI	CCCGC	3 cut(s)	1231, 1420, 2050
FauNDI	CATATG	1 cut(s)	1041
FbaI	TGATCA	1 cut(s)	1620
FblI	GTMKAC	1 cut(s)	1917
Fnu4HI	GCNGC	3 cut(s)	1350, 1989, 2202
FokI	GGATG	7 cut(s)	293, 658, 884, 1339, 1496, 1574, 2145
FriOI	GRGCYC	1 cut(s)	10
Fsp4HI	GCNGC	3 cut(s)	1350, 1989, 2202
FspBI	CTAG	4 cut(s)	588, 1232, 2003, 2063
GlaI	GCGC	3 cut(s)	441, 1924, 2040
GluI	GCNGC	3 cut(s)	1350, 1989, 2202
GsuI	CTGGAG	2 cut(s)	1887, 1972
HaeII	RGCGCY	1 cut(s)	2042
HaeIII	GGCC	1 cut(s)	1256
HapII	CCGG	3 cut(s)	773, 1809, 1854
HhaI	GCGC	3 cut(s)	442, 1925, 2041
Hin1II	CATG	7 cut(s)	182, 1196, 1302, 1611, 1627, 2036, 2075
Hin6I	GCGC	3 cut(s)	440, 1923, 2039
HinP1I	GCGC	3 cut(s)	440, 1923, 2039
HincII	GTYRAC	1 cut(s)	345
HindII	GTYRAC	1 cut(s)	345
HindIII	AAGCTT	2 cut(s)	747, 1093
HinfI	GANTC	9 cut(s)	901, 1179, 1441, 1685, 1722, 1749, 1812, 1944, 2269
HpaII	CCGG	3 cut(s)	773, 1809, 1854
HphI	GGTGA	8 cut(s)	560, 879, 908, 971, 1253, 1384, 1747, 2192
Hpy166II	GTNNAC	3 cut(s)	235, 345, 1918
Hpy188I	TCNGA	9 cut(s)	56, 163, 210, 1272, 1366, 1386, 1593, 1721, 2208
Hpy8I	GTNNAC	3 cut(s)	235, 345, 1918
Hpy99I	CGWCG	5 cut(s)	78, 120, 156, 455, 954
HpyAV	CCTTC	7 cut(s)	450, 553, 862, 1011, 1523, 1964, 2077
HpyCH4IV	ACGT	2 cut(s)	1712, 2049
HpyF10VI	GCNNNNNNNGC	5 cut(s)	439, 1349, 1655, 1985, 2198
HpySE526I	ACGT	2 cut(s)	1712, 2049
Hsp92II	CATG	7 cut(s)	182, 1196, 1302, 1611, 1627, 2036, 2075
HspAI	GCGC	3 cut(s)	440, 1923, 2039
Ksp22I	TGATCA	1 cut(s)	1620
Kzo9I	GATC	9 cut(s)	56, 1006, 1218, 1311, 1447, 1498, 1504, 1620, 1800
LguI	GCTCTTC	1 cut(s)	2152
LmnI	GCTCC	3 cut(s)	1153, 1430, 1550
Lsp1109I	GCAGC	3 cut(s)	1336, 1975, 2188
MaeI	CTAG	4 cut(s)	588, 1232, 2003, 2063
MaeII	ACGT	2 cut(s)	1712, 2049
MaeIII	GTNAC	8 cut(s)	325, 446, 526, 694, 1112, 1294, 1708, 1739
MalI	GATC	9 cut(s)	58, 1008, 1220, 1313, 1449, 1500, 1506, 1622, 1802
MboI	GATC	9 cut(s)	56, 1006, 1218, 1311, 1447, 1498, 1504, 1620, 1800
MfeI	CAATTG	1 cut(s)	965
MflI	RGATCY	1 cut(s)	56
MhlI	GDGCHC	1 cut(s)	10
MluCI	AATT	6 cut(s)	44, 100, 201, 944, 965, 1877
MlyI	GAGTC	6 cut(s)	895, 1188, 1731, 1743, 1938, 2278
Mph1103I	ATGCAT	1 cut(s)	1051
MseI	TTAA	5 cut(s)	357, 621, 1086, 1661, 2151
MslI	CAYNNNNRTG	3 cut(s)	1044, 1829, 2131
MspI	CCGG	3 cut(s)	773, 1809, 1854
MspR9I	CCNGG	4 cut(s)	1252, 1809, 2028, 2130
MunI	CAATTG	1 cut(s)	965
MvaI	CCWGG	3 cut(s)	1252, 2028, 2130
MvnI	CGCG	1 cut(s)	263
MwoI	GCNNNNNNNGC	5 cut(s)	439, 1349, 1655, 1985, 2198
NciI	CCSGG	1 cut(s)	1809
NdeI	CATATG	1 cut(s)	1041
NdeII	GATC	9 cut(s)	56, 1006, 1218, 1311, 1447, 1498, 1504, 1620, 1800
NlaIII	CATG	7 cut(s)	182, 1196, 1302, 1611, 1627, 2036, 2075
NlaIV	GGNNCC	2 cut(s)	1432, 1552
NmuCI	GTSAC	2 cut(s)	446, 1739
NsiI	ATGCAT	1 cut(s)	1051
NspI	RCATGY	2 cut(s)	182, 2036
PciI	ACATGT	1 cut(s)	2032
PciSI	GCTCTTC	1 cut(s)	2152
PfeI	GAWTC	3 cut(s)	1441, 1685, 1812
PflFI	GACNNNGTC	1 cut(s)	2015
PkrI	GCNGC	3 cut(s)	1351, 1990, 2203
PleI	GAGTC	6 cut(s)	895, 1187, 1730, 1743, 1938, 2277
PpsI	GAGTC	6 cut(s)	895, 1187, 1730, 1743, 1938, 2277
PscI	ACATGT	1 cut(s)	2032
Psp124BI	GAGCTC	1 cut(s)	10
Psp1406I	AACGTT	1 cut(s)	1712
Psp6I	CCWGG	3 cut(s)	1250, 2026, 2128
PspGI	CCWGG	3 cut(s)	1250, 2026, 2128
PspN4I	GGNNCC	2 cut(s)	1432, 1552
PspPI	GGNCC	2 cut(s)	795, 1254
PsrI	GAACNNNNNNTAC	2 cut(s)	1388, 1420
PstNI	CAGNNNCTG	1 cut(s)	1349
PsuI	RGATCY	1 cut(s)	56
PsyI	GACNNNGTC	1 cut(s)	2015
RsaI	GTAC	3 cut(s)	177, 260, 1538
RsaNI	GTAC	3 cut(s)	176, 259, 1537
RseI	CAYNNNNRTG	3 cut(s)	1044, 1829, 2131
SacI	GAGCTC	1 cut(s)	10
SapI	GCTCTTC	1 cut(s)	2152
SaqAI	TTAA	5 cut(s)	357, 621, 1086, 1661, 2151
SatI	GCNGC	3 cut(s)	1350, 1989, 2202
Sau3AI	GATC	9 cut(s)	56, 1006, 1218, 1311, 1447, 1498, 1504, 1620, 1800
Sau96I	GGNCC	2 cut(s)	795, 1254
SchI	GAGTC	6 cut(s)	895, 1188, 1731, 1743, 1938, 2278
ScrFI	CCNGG	4 cut(s)	1252, 1809, 2028, 2130
SduI	GDGCHC	1 cut(s)	10
SinI	GGWCC	1 cut(s)	795
SmiMI	CAYNNNNRTG	3 cut(s)	1044, 1829, 2131
SmlI	CTYRAG	1 cut(s)	2243
SmoI	CTYRAG	1 cut(s)	2243
Sse9I	AATT	6 cut(s)	44, 100, 201, 944, 965, 1877
SsiI	CCGC	9 cut(s)	798, 1238, 1427, 1548, 1649, 1941, 1979, 1996, 2057
SspMI	CTAG	4 cut(s)	588, 1232, 2003, 2063
SstI	GAGCTC	1 cut(s)	10
StyD4I	CCNGG	4 cut(s)	1250, 1807, 2026, 2128
TaiI	ACGT	2 cut(s)	1715, 2052
TasI	AATT	6 cut(s)	44, 100, 201, 944, 965, 1877
TatI	WGTACW	1 cut(s)	175
TfiI	GAWTC	3 cut(s)	1441, 1685, 1812
Tru1I	TTAA	5 cut(s)	357, 621, 1086, 1661, 2151
Tru9I	TTAA	5 cut(s)	357, 621, 1086, 1661, 2151
TscAI	CASTG	1 cut(s)	1472
TseFI	GTSAC	2 cut(s)	446, 1739
TseI	GCWGC	3 cut(s)	1349, 1988, 2201
Tsp45I	GTSAC	2 cut(s)	446, 1739
TspGWI	ACGGA	2 cut(s)	120, 468
TspRI	CASTG	1 cut(s)	1472
Tth111I	GACNNNGTC	1 cut(s)	2015
VpaK11BI	GGWCC	1 cut(s)	795
XagI	CCTNNNNNAGG	1 cut(s)	210
XapI	RAATTY	3 cut(s)	201, 944, 1877
XbaI	TCTAGA	1 cut(s)	1231
XceI	RCATGY	2 cut(s)	182, 2036
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2136
XmiI	GTMKAC	1 cut(s)	1917
XspI	CTAG	4 cut(s)	588, 1232, 2003, 2063
Zsp2I	ATGCAT	1 cut(s)	1051

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.