Prupe.5G047200_v2.0.a1

Pentatricopeptide repeat-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
5021413 .. 5024093
2681 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G047200.1

Sequence Viewer

Length: 2259 bp
ATGCGCGCCTCATTTTGCCGACCCCTCTGTTTTACCTTCTCAGAAACCTTAGTCAAACTTCGATGCTTTGATTTATATTGCCGATGTTATGAAACCCAGATTGCATTTTCAAGAACCCATAATGCAAAACTCACTTCTGATGATTCACAGCTTCTTCATTGTCTTTCCCAAAATCTATTTGGAGAGGCACGCAAGCTGCTTGAGAAATTGCCTGCAAGAAATAGCCATGGCCGTGTTGTTCACTGGACTTCTTTGCTTACAAAATACTCGAGAAGTGGTTGCGTTGATGAGGCTCGGATGCTCTTTGAGATCATGCCAGAGAGGAACATTGTGACTTATAATGCGATGTTGTCAGGGTATGTCCAATCTGGGAGGTTGAATGAGGGCTGGCGGTTCTTTGAGGAGATGCCAGAGAGAAATGTTGTATCGTGGACTTCAGTGCTCTGTGGGTTAGCAGATGCGGGGAGGATTGATGAGGCGCGGGGATTGTTTGATGCGATGCCAGAGAGGAATGTTGTTTCTTGGAATTCCATGATTGCTGGGTTGATTAGGAATGGGGATTTGGATGGAGCAAGGCGGGTTTTTGAGCAAATGCCGATGAAGAATGTTGTTTCTTGGAATGCCATGATTTCTGGGTATGCTGAGCATTGTAGAATGGAAGAAGCAAGAGTGTTATTTGATGAGATGGTGGATCGGAATGTGATTACGTGGACTAGCATGATATCTGGTTACTGTAGGTCTGGTAATGTGGATGAGGGCTATTCTTTGTTTCAAAAAATGCCTGAGAGGAATGTTGTTTCTTGGACAGCCATGATTGGTGGCTTTGCTTGGAATGGCTTCTATAAAGAAGCTCTATCACTATTTCTTAAATTGAAGGGGAACTGTGACACAAAACCGAATGGAGAGACCTTTATATCGCTTGTATATGCTTGTGCAGGTATTGATGTGCCTAATCTTGGCAAGCAACTACATGCTCAGTTGATTGTGAACGGTTGGGAGTATGATGATTATGATGGCAGATTATCAAAGAGCCTCATTCACATGTACTCAGCCTTTGGTATCATGAATTCTGCGTACTTTATTTTTATCAAGAATTCAAGTAATTGTACAGCTCAGTCTTGCAATTCCATGATTAATGGTTACATACAGATTGGACAGCTAGCCCGGGCTCAACATTTCTTTGACAATCTACCTATCCGAGACAAGATCTCTTGGACGTCTATGATCACTGGGTATTTTAGTGTTGGACAAGTATCAAAGGCTTGTTATCTTTTCCAGATCATGCCAGATAGAGATGCAGTTGCATGGACAGCGATGATTTCGGGGCACATCCAAAATGAGCTTTTTGCAGAAGCTACCGATTTCTTTTCAGAAATGAGGTCAGAAGGTGTTTCGCCTCTAAATTCAACATATTCAGTTCTTCTTGGAGCTGCTGGTGCAATGGCATATCTTGATCCTGGGAGACAGTTCCACGGCCTGCTGATAAAAACACAATATGAATCTGACTTGTTTATTAACAACTCACTGATTTCCATGTATGCAAAATGTGGGGAGATAGATGACGCTTACCGTGCATTCTCAAACATGAGTTTGCGGGATTTGATTTCATGGAATTCCATGATCATGGGGTTCTCAGACCATGGACATGCGAATGAGACTCTGAAGATCTATGAATGCATGGTGAAATCTGGGACCCGCCCAAATTCTGTCACTTTTTTGGGCATACTATCAGCATGTAGCCATGCAGGGCTTGTCCACAGAGGGTGGGAGTTTTTCAATGCCATGAGTAATATTTATGCAATTCAACCAGCTTTGGAGCATTATGTTTGTATGGTTAATCTTCTGGGCAGAGCTGGGAAGGTAAAAGAAGCAGAAGAATTCGTTTCAAGGCTACCTTTCAAATCAGATCATGCTGTTTTGGGGGCATTGCTTGGTGTATGCGGGTTTGGTGAAACAAATGCTGAGGTTGCTAGGTATGCAGCCAAACAACTCCTGGAGCTGGATCCTTTAAATGCACCTGCCCATGTGGTGCTTTGTAACATATATGCCGCTAATGGTCAGCATATTGAGGAAAAATTGCTGAGAAGGGAGATGGGATTGAAAGGAGTGAGAAAGGTTCCTGGATGCAGTTGGATTGTGCTGCAAGGAAGAGTTAATGTCTTCCTCTCAGGAGATAAATTACTTTCACAAGTGGATGAGATGCTATCACTTGTATTTGGGACTATTGGTCAGAATCATAAGATGGGTAGAAATATGTGA

Protein Analysis

753

Amino Acids

84.49

Weight (kDa)

6.68

Isoelectric Point (pI)

36.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012180)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 339
AarI CACCTGC 1 cut(s) 2026
AatII GACGTC 1 cut(s) 1220
Acc36I ACCTGC 2 cut(s) 926, 2026
AccII CGCG 2 cut(s) 6, 481
AciI CCGC 8 cut(s) 391, 461, 481, 577, 1594, 1696, 1941, 2049
AclWI GGATC 4 cut(s) 699, 1448, 1997, 2010
AcoI YGGCCR 1 cut(s) 229
AcsI RAATTY 7 cut(s) 526, 1066, 1093, 1402, 1612, 1702, 1877
AcuI CTGAAG 2 cut(s) 420, 1682
AcyI GRCGYC 1 cut(s) 1217
AfaI GTAC 3 cut(s) 1046, 1076, 1108
AfiI CCNNNNNNNGG 2 cut(s) 956, 1999
AflIII ACRYGT 1 cut(s) 1041
AhdI GACNNNNNGTC 1 cut(s) 2226
AjnI CCWGG 3 cut(s) 1456, 1992, 2119
AjuI GAANNNNNNNTTGG 2 cut(s) 545, 577
Alw21I GWGCWC 1 cut(s) 444
Alw26I GTCTC 4 cut(s) 899, 1194, 1456, 1649
AlwI GGATC 4 cut(s) 699, 1448, 1997, 2010
Ama87I CYCGRG 2 cut(s) 268, 1164
AoxI GGCC 2 cut(s) 229, 1474
ApeKI GCWGC 4 cut(s) 196, 1430, 1979, 2140
ApoI RAATTY 7 cut(s) 526, 1066, 1093, 1402, 1612, 1702, 1877
AseI ATTAAT 1 cut(s) 1134
Asp700I GAANNNNTTC 1 cut(s) 836
AspLEI GCGC 3 cut(s) 6, 8, 481
AspS9I GGNCC 1 cut(s) 1692
AsuC2I CCSGG 2 cut(s) 1165, 1166
AsuHPI GGTGA 2 cut(s) 1693, 1961
AsuNHI GCTAGC 1 cut(s) 1159
AvaI CYCGRG 2 cut(s) 268, 1164
AvaII GGWCC 1 cut(s) 1692
BaeGI GKGCMC 1 cut(s) 1329
BamHI GGATCC 1 cut(s) 2002
BanII GRGCYC 1 cut(s) 1171
BbsI GAAGAC 1 cut(s) 2152
Bbv12I GWGCWC 1 cut(s) 444
BbvCI CCTCAGC 1 cut(s) 1962
BbvI GCAGC 4 cut(s) 183, 1417, 1991, 2127
BccI CCATC 5 cut(s) 560, 679, 1007, 2086, 2236
BceAI ACGGC 2 cut(s) 216, 1489
BciT130I CCWGG 3 cut(s) 1458, 1994, 2121
BclI TGATCA 2 cut(s) 1224, 1620
BcnI CCSGG 2 cut(s) 1165, 1166
BcoDI GTCTC 4 cut(s) 899, 1194, 1456, 1649
BfaI CTAG 3 cut(s) 714, 1160, 1971
BfmI CTRYAG 1 cut(s) 733
BfuAI ACCTGC 2 cut(s) 926, 2026
BglII AGATCT 2 cut(s) 1206, 1665
BisI GCNGC 5 cut(s) 197, 1431, 1980, 2049, 2141
BlpI GCTNAGC 1 cut(s) 642
BlsI GCNGC 5 cut(s) 198, 1432, 1981, 2050, 2142
Bme1390I CCNGG 5 cut(s) 1165, 1166, 1458, 1994, 2121
Bme18I GGWCC 1 cut(s) 1692
BmeRI GACNNNNNGTC 1 cut(s) 2226
BmeT110I CYCGRG 2 cut(s) 268, 1164
BmgT120I GGNCC 1 cut(s) 1692
BmiI GGNNCC 4 cut(s) 1693, 1694, 2004, 2118
BmrFI CCNGG 5 cut(s) 1165, 1166, 1458, 1994, 2121
BmrI ACTGGG 1 cut(s) 1239
BmsI GCATC 9 cut(s) 53, 288, 396, 448, 484, 489, 1285, 2114, 2190
BmtI GCTAGC 1 cut(s) 1163
BmuI ACTGGG 1 cut(s) 1239
BpiI GAAGAC 1 cut(s) 2152
BpmI CTGGAG 1 cut(s) 2015
Bpu10I CCTNAGC 1 cut(s) 1962
Bpu1102I GCTNAGC 1 cut(s) 642
BpuEI CTTGAG 1 cut(s) 221
BpuMI CCSGG 2 cut(s) 1165, 1166
BsaAI YACGTR 1 cut(s) 708
BsaHI GRCGYC 1 cut(s) 1217
BsaI GGTCTC 1 cut(s) 899
BsaJI CCNNGG 5 cut(s) 226, 1164, 1457, 1471, 1639
Bsc4I CCNNNNNNNGG 2 cut(s) 956, 1999
Bse1I ACTGG 2 cut(s) 248, 1234
Bse3DI GCAATG 2 cut(s) 1446, 1925
BseBI CCWGG 3 cut(s) 1458, 1994, 2121
BseDI CCNNGG 5 cut(s) 226, 1164, 1457, 1471, 1639
BseGI GGATG 6 cut(s) 303, 571, 757, 1329, 2129, 2200
BseLI CCNNNNNNNGG 2 cut(s) 956, 1999
BseMI GCAATG 2 cut(s) 1446, 1925
BseNI ACTGG 2 cut(s) 248, 1234
BsePI GCGCGC 1 cut(s) 4
BseRI GAGGAG 1 cut(s) 416
BseSI GKGCMC 1 cut(s) 1329
BseXI GCAGC 4 cut(s) 183, 1417, 1991, 2127
BseYI CCCAGC 2 cut(s) 539, 1853
BsgI GTGCAG 1 cut(s) 954
Bsh1236I CGCG 2 cut(s) 6, 481
BshFI GGCC 2 cut(s) 231, 1476
BsiHKAI GWGCWC 1 cut(s) 444
BsiHKCI CYCGRG 2 cut(s) 268, 1164
BsiSI CCGG 1 cut(s) 1165
BslFI GGGAC 2 cut(s) 1705, 2233
BslI CCNNNNNNNGG 2 cut(s) 956, 1999
BsmAI GTCTC 4 cut(s) 899, 1194, 1456, 1649
BsmFI GGGAC 2 cut(s) 1705, 2233
BsmI GAATGC 3 cut(s) 625, 1574, 1679
BsnI GGCC 2 cut(s) 231, 1476
Bso31I GGTCTC 1 cut(s) 899
BsoBI CYCGRG 2 cut(s) 268, 1164
Bsp1286I GDGCHC 3 cut(s) 444, 1171, 1329
Bsp1407I TGTACA 1 cut(s) 1106
Bsp1720I GCTNAGC 1 cut(s) 642
Bsp19I CCATGG 2 cut(s) 226, 1639
BspACI CCGC 8 cut(s) 391, 461, 481, 577, 1594, 1696, 1941, 2049
BspANI GGCC 2 cut(s) 231, 1476
BspFNI CGCG 2 cut(s) 6, 481
BspHI TCATGA 1 cut(s) 1062
BspLI GGNNCC 4 cut(s) 1693, 1694, 2004, 2118
BspMI ACCTGC 2 cut(s) 926, 2026
BspOI GCTAGC 1 cut(s) 1163
BspPI GGATC 4 cut(s) 699, 1448, 1997, 2010
BspTNI GGTCTC 1 cut(s) 899
BsrDI GCAATG 2 cut(s) 1446, 1925
BsrGI TGTACA 1 cut(s) 1106
BsrI ACTGG 2 cut(s) 248, 1234
BssECI CCNNGG 5 cut(s) 226, 1164, 1457, 1471, 1639
BssHII GCGCGC 1 cut(s) 4
BssNI GRCGYC 1 cut(s) 1217
BssT1I CCWWGG 2 cut(s) 226, 1639
Bst2UI CCWGG 3 cut(s) 1458, 1994, 2121
Bst4CI ACNGT 5 cut(s) 734, 884, 992, 1467, 1571
Bst6I CTCTTC 1 cut(s) 2143
BstACI GRCGYC 1 cut(s) 1217
BstAUI TGTACA 1 cut(s) 1106
BstBAI YACGTR 1 cut(s) 708
BstC8I GCNNGC 8 cut(s) 6, 190, 194, 213, 389, 962, 1161, 1478
BstDSI CCRYGG 3 cut(s) 226, 1471, 1639
BstF5I GGATG 6 cut(s) 303, 571, 757, 1329, 2129, 2200
BstFNI CGCG 2 cut(s) 6, 481
BstHHI GCGC 3 cut(s) 6, 8, 481
BstMAI GTCTC 4 cut(s) 899, 1194, 1456, 1649
BstMWI GCNNNNNNNGC 5 cut(s) 1310, 1436, 1571, 1967, 1976
BstNI CCWGG 3 cut(s) 1458, 1994, 2121
BstNSI RCATGY 4 cut(s) 974, 1045, 1649, 1737
BstSCI CCNGG 5 cut(s) 1163, 1164, 1456, 1992, 2119
BstSFI CTRYAG 1 cut(s) 733
BstSLI GKGCMC 1 cut(s) 1329
BstUI CGCG 2 cut(s) 6, 481
BstV1I GCAGC 4 cut(s) 183, 1417, 1991, 2127
BstV2I GAAGAC 1 cut(s) 2152
BstX2I RGATCY 3 cut(s) 1206, 1665, 2002
BstXI CCANNNNNNTGG 1 cut(s) 1624
BstYI RGATCY 3 cut(s) 1206, 1665, 2002
BsuRI GGCC 2 cut(s) 231, 1476
BtgI CCRYGG 3 cut(s) 226, 1471, 1639
BtgZI GCGATG 3 cut(s) 359, 512, 1328
BtsCI GGATG 6 cut(s) 303, 571, 757, 1329, 2129, 2200
BtsIMutI CAGTG 4 cut(s) 241, 444, 1227, 1523
BveI ACCTGC 2 cut(s) 926, 2026
Cac8I GCNNGC 8 cut(s) 6, 190, 194, 213, 389, 962, 1161, 1478
CciI TCATGA 1 cut(s) 1062
CfoI GCGC 3 cut(s) 6, 8, 481
Cfr13I GGNCC 1 cut(s) 1692
Cfr9I CCCGGG 1 cut(s) 1164
CseI GACGC 1 cut(s) 1571
Csp6I GTAC 3 cut(s) 1045, 1075, 1107
CviQI GTAC 3 cut(s) 1045, 1075, 1107
DraI TTTAAA 1 cut(s) 2010
DriI GACNNNNNGTC 1 cut(s) 2226
EaeI YGGCCR 1 cut(s) 229
Eam1104I CTCTTC 1 cut(s) 2143
Eam1105I GACNNNNNGTC 1 cut(s) 2226
EarI CTCTTC 1 cut(s) 2143
Eco130I CCWWGG 2 cut(s) 226, 1639
Eco24I GRGCYC 1 cut(s) 1171
Eco31I GGTCTC 1 cut(s) 899
Eco32I GATATC 1 cut(s) 723
Eco47I GGWCC 1 cut(s) 1692
Eco57I CTGAAG 2 cut(s) 420, 1682
Eco88I CYCGRG 2 cut(s) 268, 1164
EcoO109I RGGNCCY 1 cut(s) 1692
EcoRI GAATTC 5 cut(s) 526, 1066, 1093, 1612, 1877
EcoRII CCWGG 3 cut(s) 1456, 1992, 2119
EcoRV GATATC 1 cut(s) 723
EcoT14I CCWWGG 2 cut(s) 226, 1639
EcoT22I ATGCAT 1 cut(s) 1679
EcoT38I GRGCYC 1 cut(s) 1171
ErhI CCWWGG 2 cut(s) 226, 1639
FalI AAGNNNNNCTT 2 cut(s) 1879, 1911
FaqI GGGAC 2 cut(s) 1705, 2233
FauI CCCGC 6 cut(s) 454, 474, 570, 1587, 1703, 1934
FbaI TGATCA 2 cut(s) 1224, 1620
Fnu4HI GCNGC 5 cut(s) 197, 1431, 1980, 2049, 2141
FokI GGATG 6 cut(s) 310, 578, 764, 1316, 2136, 2207
FriOI GRGCYC 1 cut(s) 1171
Fsp4HI GCNGC 5 cut(s) 197, 1431, 1980, 2049, 2141
FspBI CTAG 3 cut(s) 714, 1160, 1971
GlaI GCGC 3 cut(s) 5, 7, 480
GluI GCNGC 5 cut(s) 197, 1431, 1980, 2049, 2141
GsaI CCCAGC 2 cut(s) 543, 1857
GsuI CTGGAG 1 cut(s) 2015
HaeIII GGCC 2 cut(s) 231, 1476
HapII CCGG 1 cut(s) 1165
HgaI GACGC 1 cut(s) 1571
HhaI GCGC 3 cut(s) 6, 8, 481
Hin1I GRCGYC 1 cut(s) 1217
Hin6I GCGC 3 cut(s) 4, 6, 479
HinP1I GCGC 3 cut(s) 4, 6, 479
HinfI GANTC 4 cut(s) 143, 1499, 1657, 2233
HpaII CCGG 1 cut(s) 1165
HphI GGTGA 2 cut(s) 1693, 1961
Hpy166II GTNNAC 5 cut(s) 241, 432, 711, 988, 1756
Hpy188III TCNNGA 7 cut(s) 111, 270, 1063, 1090, 1276, 1451, 2169
Hpy8I GTNNAC 5 cut(s) 241, 432, 711, 988, 1756
HpyAV CCTTC 5 cut(s) 46, 868, 1379, 1852, 2079
HpyCH4III ACNGT 5 cut(s) 734, 884, 992, 1467, 1571
HpyCH4IV ACGT 2 cut(s) 707, 1217
HpyF10VI GCNNNNNNNGC 5 cut(s) 1310, 1436, 1571, 1967, 1976
HpySE526I ACGT 2 cut(s) 707, 1217
Hsp92I GRCGYC 1 cut(s) 1217
HspAI GCGC 3 cut(s) 4, 6, 479
KflI GGGWCCC 1 cut(s) 1692
Ksp22I TGATCA 2 cut(s) 1224, 1620
LmnI GCTCC 4 cut(s) 569, 1427, 1816, 1996
Lsp1109I GCAGC 4 cut(s) 183, 1417, 1991, 2127
LweI GCATC 9 cut(s) 53, 288, 396, 448, 484, 489, 1285, 2114, 2190
MaeI CTAG 3 cut(s) 714, 1160, 1971
MaeII ACGT 2 cut(s) 707, 1217
MaeIII GTNAC 6 cut(s) 331, 728, 884, 1139, 1708, 2036
MboII GAAGA 9 cut(s) 146, 613, 671, 1412, 1675, 1832, 1886, 2152, 2160
MflI RGATCY 3 cut(s) 1206, 1665, 2002
MhlI GDGCHC 3 cut(s) 444, 1171, 1329
MlyI GAGTC 1 cut(s) 1651
MmeI TCCRAC 2 cut(s) 1225, 2111
Mph1103I ATGCAT 1 cut(s) 1679
MroXI GAANNNNTTC 1 cut(s) 836
MseI TTAA 6 cut(s) 867, 1134, 1515, 1836, 2009, 2154
MslI CAYNNNNRTG 5 cut(s) 231, 1040, 1622, 1644, 1650
MspI CCGG 1 cut(s) 1165
MspR9I CCNGG 5 cut(s) 1165, 1166, 1458, 1994, 2121
Mva1269I GAATGC 3 cut(s) 625, 1574, 1679
MvaI CCWGG 3 cut(s) 1458, 1994, 2121
MvnI CGCG 2 cut(s) 6, 481
MwoI GCNNNNNNNGC 5 cut(s) 1310, 1436, 1571, 1967, 1976
NciI CCSGG 2 cut(s) 1165, 1166
NcoI CCATGG 2 cut(s) 226, 1639
NheI GCTAGC 1 cut(s) 1159
NlaIV GGNNCC 4 cut(s) 1693, 1694, 2004, 2118
NmuCI GTSAC 3 cut(s) 331, 884, 1708
NsiI ATGCAT 1 cut(s) 1679
NspI RCATGY 4 cut(s) 974, 1045, 1649, 1737
PaeR7I CTCGAG 1 cut(s) 268
PagI TCATGA 1 cut(s) 1062
PaqCI CACCTGC 1 cut(s) 2026
PauI GCGCGC 1 cut(s) 4
PciI ACATGT 1 cut(s) 1041
PctI GAATGC 3 cut(s) 625, 1574, 1679
PdmI GAANNNNTTC 1 cut(s) 836
PfeI GAWTC 3 cut(s) 143, 1499, 2233
PfoI TCCNGGA 2 cut(s) 1992, 2119
PkrI GCNGC 5 cut(s) 198, 1432, 1981, 2050, 2142
PleI GAGTC 1 cut(s) 1651
PpsI GAGTC 1 cut(s) 1651
Ppu21I YACGTR 1 cut(s) 708
PpuMI RGGWCCY 1 cut(s) 1692
PscI ACATGT 1 cut(s) 1041
PshBI ATTAAT 1 cut(s) 1134
PsiI TTATAA 1 cut(s) 339
Psp5II RGGWCCY 1 cut(s) 1692
Psp6I CCWGG 3 cut(s) 1456, 1992, 2119
PspFI CCCAGC 2 cut(s) 539, 1853
PspGI CCWGG 3 cut(s) 1456, 1992, 2119
PspN4I GGNNCC 4 cut(s) 1693, 1694, 2004, 2118
PspPI GGNCC 1 cut(s) 1692
PspPPI RGGWCCY 1 cut(s) 1692
PsuI RGATCY 3 cut(s) 1206, 1665, 2002
PteI GCGCGC 1 cut(s) 4
RsaI GTAC 3 cut(s) 1046, 1076, 1108
RsaNI GTAC 3 cut(s) 1045, 1075, 1107
RseI CAYNNNNRTG 5 cut(s) 231, 1040, 1622, 1644, 1650
SaqAI TTAA 6 cut(s) 867, 1134, 1515, 1836, 2009, 2154
SatI GCNGC 5 cut(s) 197, 1431, 1980, 2049, 2141
Sau96I GGNCC 1 cut(s) 1692
SchI GAGTC 1 cut(s) 1651
ScrFI CCNGG 5 cut(s) 1165, 1166, 1458, 1994, 2121
SduI GDGCHC 3 cut(s) 444, 1171, 1329
SfaNI GCATC 9 cut(s) 53, 288, 396, 448, 484, 489, 1285, 2114, 2190
SfcI CTRYAG 1 cut(s) 733
Sfr274I CTCGAG 1 cut(s) 268
SinI GGWCC 1 cut(s) 1692
SlaI CTCGAG 1 cut(s) 268
SmaI CCCGGG 1 cut(s) 1166
SmiMI CAYNNNNRTG 5 cut(s) 231, 1040, 1622, 1644, 1650
SmlI CTYRAG 2 cut(s) 200, 268
SmoI CTYRAG 2 cut(s) 200, 268
SrfI GCCCGGGC 1 cut(s) 1166
SsiI CCGC 8 cut(s) 391, 461, 481, 577, 1594, 1696, 1941, 2049
SspI AATATT 1 cut(s) 1792
SspMI CTAG 3 cut(s) 714, 1160, 1971
StyD4I CCNGG 5 cut(s) 1163, 1164, 1456, 1992, 2119
StyI CCWWGG 2 cut(s) 226, 1639
TaaI ACNGT 5 cut(s) 734, 884, 992, 1467, 1571
TaiI ACGT 2 cut(s) 710, 1220
TaqI TCGA 2 cut(s) 61, 269
TatI WGTACW 2 cut(s) 1044, 1106
TauI GCSGC 1 cut(s) 2051
TfiI GAWTC 3 cut(s) 143, 1499, 2233
Tru1I TTAA 6 cut(s) 867, 1134, 1515, 1836, 2009, 2154
Tru9I TTAA 6 cut(s) 867, 1134, 1515, 1836, 2009, 2154
TscAI CASTG 4 cut(s) 248, 444, 1234, 1530
TseFI GTSAC 3 cut(s) 331, 884, 1708
TseI GCWGC 4 cut(s) 196, 1430, 1979, 2140
Tsp45I GTSAC 3 cut(s) 331, 884, 1708
TspDTI ATGAA 7 cut(s) 105, 146, 614, 1079, 1512, 1596, 1686
TspMI CCCGGG 1 cut(s) 1164
TspRI CASTG 4 cut(s) 248, 444, 1234, 1530
VpaK11BI GGWCC 1 cut(s) 1692
VspI ATTAAT 1 cut(s) 1134
XapI RAATTY 7 cut(s) 526, 1066, 1093, 1402, 1612, 1702, 1877
XceI RCATGY 4 cut(s) 974, 1045, 1649, 1737
XcmI CCANNNNNNNNNTGG 2 cut(s) 176, 1990
XhoI CTCGAG 1 cut(s) 268
XmaI CCCGGG 1 cut(s) 1164
XmnI GAANNNNTTC 1 cut(s) 836
XspI CTAG 3 cut(s) 714, 1160, 1971
ZraI GACGTC 1 cut(s) 1218
Zsp2I ATGCAT 1 cut(s) 1679
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.