Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G32415 |
| fragaria_vesca | FvH4_5g21130 FvH4_5g21130 FvH4_5g21130 |
| malus_domestica | MD06G1040900.v1.1 |
| prunus_persica | Prupe.5G047200_v2.0.a1 |
| pyrus_communis | pycom06g03410 |
| rosa_chinensis | RchiOBHm_Chr7g0208251 |
| rosa_laevigata | RLG00000003235 |
| rosa_multiflora | Rmu_sc0000841.1_g000023 Rmu_sc0000841.1_g000024 Rmu_sc0007869.1_g000019 |
| rosa_roxburghii | Rroxscaffold_3G00250640 |
| rosa_rugosa | Rorug07G0102500 |
| rosa_samantha | Rh7AG236700 Rh7BG232300 Rh7CG252600 Rh7DG242700 |
| rosa_wichuraiana | Rw7G020200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 339 |
| AarI | CACCTGC | 1 cut(s) | 2026 |
| AatII | GACGTC | 1 cut(s) | 1220 |
| Acc36I | ACCTGC | 2 cut(s) | 926, 2026 |
| AccII | CGCG | 2 cut(s) | 6, 481 |
| AciI | CCGC | 8 cut(s) | 391, 461, 481, 577, 1594, 1696, 1941, 2049 |
| AclWI | GGATC | 4 cut(s) | 699, 1448, 1997, 2010 |
| AcoI | YGGCCR | 1 cut(s) | 229 |
| AcsI | RAATTY | 7 cut(s) | 526, 1066, 1093, 1402, 1612, 1702, 1877 |
| AcuI | CTGAAG | 2 cut(s) | 420, 1682 |
| AcyI | GRCGYC | 1 cut(s) | 1217 |
| AfaI | GTAC | 3 cut(s) | 1046, 1076, 1108 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 956, 1999 |
| AflIII | ACRYGT | 1 cut(s) | 1041 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2226 |
| AjnI | CCWGG | 3 cut(s) | 1456, 1992, 2119 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 545, 577 |
| Alw21I | GWGCWC | 1 cut(s) | 444 |
| Alw26I | GTCTC | 4 cut(s) | 899, 1194, 1456, 1649 |
| AlwI | GGATC | 4 cut(s) | 699, 1448, 1997, 2010 |
| Ama87I | CYCGRG | 2 cut(s) | 268, 1164 |
| AoxI | GGCC | 2 cut(s) | 229, 1474 |
| ApeKI | GCWGC | 4 cut(s) | 196, 1430, 1979, 2140 |
| ApoI | RAATTY | 7 cut(s) | 526, 1066, 1093, 1402, 1612, 1702, 1877 |
| AseI | ATTAAT | 1 cut(s) | 1134 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 836 |
| AspLEI | GCGC | 3 cut(s) | 6, 8, 481 |
| AspS9I | GGNCC | 1 cut(s) | 1692 |
| AsuC2I | CCSGG | 2 cut(s) | 1165, 1166 |
| AsuHPI | GGTGA | 2 cut(s) | 1693, 1961 |
| AsuNHI | GCTAGC | 1 cut(s) | 1159 |
| AvaI | CYCGRG | 2 cut(s) | 268, 1164 |
| AvaII | GGWCC | 1 cut(s) | 1692 |
| BaeGI | GKGCMC | 1 cut(s) | 1329 |
| BamHI | GGATCC | 1 cut(s) | 2002 |
| BanII | GRGCYC | 1 cut(s) | 1171 |
| BbsI | GAAGAC | 1 cut(s) | 2152 |
| Bbv12I | GWGCWC | 1 cut(s) | 444 |
| BbvCI | CCTCAGC | 1 cut(s) | 1962 |
| BbvI | GCAGC | 4 cut(s) | 183, 1417, 1991, 2127 |
| BccI | CCATC | 5 cut(s) | 560, 679, 1007, 2086, 2236 |
| BceAI | ACGGC | 2 cut(s) | 216, 1489 |
| BciT130I | CCWGG | 3 cut(s) | 1458, 1994, 2121 |
| BclI | TGATCA | 2 cut(s) | 1224, 1620 |
| BcnI | CCSGG | 2 cut(s) | 1165, 1166 |
| BcoDI | GTCTC | 4 cut(s) | 899, 1194, 1456, 1649 |
| BfaI | CTAG | 3 cut(s) | 714, 1160, 1971 |
| BfmI | CTRYAG | 1 cut(s) | 733 |
| BfuAI | ACCTGC | 2 cut(s) | 926, 2026 |
| BglII | AGATCT | 2 cut(s) | 1206, 1665 |
| BisI | GCNGC | 5 cut(s) | 197, 1431, 1980, 2049, 2141 |
| BlpI | GCTNAGC | 1 cut(s) | 642 |
| BlsI | GCNGC | 5 cut(s) | 198, 1432, 1981, 2050, 2142 |
| Bme1390I | CCNGG | 5 cut(s) | 1165, 1166, 1458, 1994, 2121 |
| Bme18I | GGWCC | 1 cut(s) | 1692 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2226 |
| BmeT110I | CYCGRG | 2 cut(s) | 268, 1164 |
| BmgT120I | GGNCC | 1 cut(s) | 1692 |
| BmiI | GGNNCC | 4 cut(s) | 1693, 1694, 2004, 2118 |
| BmrFI | CCNGG | 5 cut(s) | 1165, 1166, 1458, 1994, 2121 |
| BmrI | ACTGGG | 1 cut(s) | 1239 |
| BmsI | GCATC | 9 cut(s) | 53, 288, 396, 448, 484, 489, 1285, 2114, 2190 |
| BmtI | GCTAGC | 1 cut(s) | 1163 |
| BmuI | ACTGGG | 1 cut(s) | 1239 |
| BpiI | GAAGAC | 1 cut(s) | 2152 |
| BpmI | CTGGAG | 1 cut(s) | 2015 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1962 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 642 |
| BpuEI | CTTGAG | 1 cut(s) | 221 |
| BpuMI | CCSGG | 2 cut(s) | 1165, 1166 |
| BsaAI | YACGTR | 1 cut(s) | 708 |
| BsaHI | GRCGYC | 1 cut(s) | 1217 |
| BsaI | GGTCTC | 1 cut(s) | 899 |
| BsaJI | CCNNGG | 5 cut(s) | 226, 1164, 1457, 1471, 1639 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 956, 1999 |
| Bse1I | ACTGG | 2 cut(s) | 248, 1234 |
| Bse3DI | GCAATG | 2 cut(s) | 1446, 1925 |
| BseBI | CCWGG | 3 cut(s) | 1458, 1994, 2121 |
| BseDI | CCNNGG | 5 cut(s) | 226, 1164, 1457, 1471, 1639 |
| BseGI | GGATG | 6 cut(s) | 303, 571, 757, 1329, 2129, 2200 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 956, 1999 |
| BseMI | GCAATG | 2 cut(s) | 1446, 1925 |
| BseNI | ACTGG | 2 cut(s) | 248, 1234 |
| BsePI | GCGCGC | 1 cut(s) | 4 |
| BseRI | GAGGAG | 1 cut(s) | 416 |
| BseSI | GKGCMC | 1 cut(s) | 1329 |
| BseXI | GCAGC | 4 cut(s) | 183, 1417, 1991, 2127 |
| BseYI | CCCAGC | 2 cut(s) | 539, 1853 |
| BsgI | GTGCAG | 1 cut(s) | 954 |
| Bsh1236I | CGCG | 2 cut(s) | 6, 481 |
| BshFI | GGCC | 2 cut(s) | 231, 1476 |
| BsiHKAI | GWGCWC | 1 cut(s) | 444 |
| BsiHKCI | CYCGRG | 2 cut(s) | 268, 1164 |
| BsiSI | CCGG | 1 cut(s) | 1165 |
| BslFI | GGGAC | 2 cut(s) | 1705, 2233 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 956, 1999 |
| BsmAI | GTCTC | 4 cut(s) | 899, 1194, 1456, 1649 |
| BsmFI | GGGAC | 2 cut(s) | 1705, 2233 |
| BsmI | GAATGC | 3 cut(s) | 625, 1574, 1679 |
| BsnI | GGCC | 2 cut(s) | 231, 1476 |
| Bso31I | GGTCTC | 1 cut(s) | 899 |
| BsoBI | CYCGRG | 2 cut(s) | 268, 1164 |
| Bsp1286I | GDGCHC | 3 cut(s) | 444, 1171, 1329 |
| Bsp1407I | TGTACA | 1 cut(s) | 1106 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 642 |
| Bsp19I | CCATGG | 2 cut(s) | 226, 1639 |
| BspACI | CCGC | 8 cut(s) | 391, 461, 481, 577, 1594, 1696, 1941, 2049 |
| BspANI | GGCC | 2 cut(s) | 231, 1476 |
| BspFNI | CGCG | 2 cut(s) | 6, 481 |
| BspHI | TCATGA | 1 cut(s) | 1062 |
| BspLI | GGNNCC | 4 cut(s) | 1693, 1694, 2004, 2118 |
| BspMI | ACCTGC | 2 cut(s) | 926, 2026 |
| BspOI | GCTAGC | 1 cut(s) | 1163 |
| BspPI | GGATC | 4 cut(s) | 699, 1448, 1997, 2010 |
| BspTNI | GGTCTC | 1 cut(s) | 899 |
| BsrDI | GCAATG | 2 cut(s) | 1446, 1925 |
| BsrGI | TGTACA | 1 cut(s) | 1106 |
| BsrI | ACTGG | 2 cut(s) | 248, 1234 |
| BssECI | CCNNGG | 5 cut(s) | 226, 1164, 1457, 1471, 1639 |
| BssHII | GCGCGC | 1 cut(s) | 4 |
| BssNI | GRCGYC | 1 cut(s) | 1217 |
| BssT1I | CCWWGG | 2 cut(s) | 226, 1639 |
| Bst2UI | CCWGG | 3 cut(s) | 1458, 1994, 2121 |
| Bst4CI | ACNGT | 5 cut(s) | 734, 884, 992, 1467, 1571 |
| Bst6I | CTCTTC | 1 cut(s) | 2143 |
| BstACI | GRCGYC | 1 cut(s) | 1217 |
| BstAUI | TGTACA | 1 cut(s) | 1106 |
| BstBAI | YACGTR | 1 cut(s) | 708 |
| BstC8I | GCNNGC | 8 cut(s) | 6, 190, 194, 213, 389, 962, 1161, 1478 |
| BstDSI | CCRYGG | 3 cut(s) | 226, 1471, 1639 |
| BstF5I | GGATG | 6 cut(s) | 303, 571, 757, 1329, 2129, 2200 |
| BstFNI | CGCG | 2 cut(s) | 6, 481 |
| BstHHI | GCGC | 3 cut(s) | 6, 8, 481 |
| BstMAI | GTCTC | 4 cut(s) | 899, 1194, 1456, 1649 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1310, 1436, 1571, 1967, 1976 |
| BstNI | CCWGG | 3 cut(s) | 1458, 1994, 2121 |
| BstNSI | RCATGY | 4 cut(s) | 974, 1045, 1649, 1737 |
| BstSCI | CCNGG | 5 cut(s) | 1163, 1164, 1456, 1992, 2119 |
| BstSFI | CTRYAG | 1 cut(s) | 733 |
| BstSLI | GKGCMC | 1 cut(s) | 1329 |
| BstUI | CGCG | 2 cut(s) | 6, 481 |
| BstV1I | GCAGC | 4 cut(s) | 183, 1417, 1991, 2127 |
| BstV2I | GAAGAC | 1 cut(s) | 2152 |
| BstX2I | RGATCY | 3 cut(s) | 1206, 1665, 2002 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1624 |
| BstYI | RGATCY | 3 cut(s) | 1206, 1665, 2002 |
| BsuRI | GGCC | 2 cut(s) | 231, 1476 |
| BtgI | CCRYGG | 3 cut(s) | 226, 1471, 1639 |
| BtgZI | GCGATG | 3 cut(s) | 359, 512, 1328 |
| BtsCI | GGATG | 6 cut(s) | 303, 571, 757, 1329, 2129, 2200 |
| BtsIMutI | CAGTG | 4 cut(s) | 241, 444, 1227, 1523 |
| BveI | ACCTGC | 2 cut(s) | 926, 2026 |
| Cac8I | GCNNGC | 8 cut(s) | 6, 190, 194, 213, 389, 962, 1161, 1478 |
| CciI | TCATGA | 1 cut(s) | 1062 |
| CfoI | GCGC | 3 cut(s) | 6, 8, 481 |
| Cfr13I | GGNCC | 1 cut(s) | 1692 |
| Cfr9I | CCCGGG | 1 cut(s) | 1164 |
| CseI | GACGC | 1 cut(s) | 1571 |
| Csp6I | GTAC | 3 cut(s) | 1045, 1075, 1107 |
| CviQI | GTAC | 3 cut(s) | 1045, 1075, 1107 |
| DraI | TTTAAA | 1 cut(s) | 2010 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2226 |
| EaeI | YGGCCR | 1 cut(s) | 229 |
| Eam1104I | CTCTTC | 1 cut(s) | 2143 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2226 |
| EarI | CTCTTC | 1 cut(s) | 2143 |
| Eco130I | CCWWGG | 2 cut(s) | 226, 1639 |
| Eco24I | GRGCYC | 1 cut(s) | 1171 |
| Eco31I | GGTCTC | 1 cut(s) | 899 |
| Eco32I | GATATC | 1 cut(s) | 723 |
| Eco47I | GGWCC | 1 cut(s) | 1692 |
| Eco57I | CTGAAG | 2 cut(s) | 420, 1682 |
| Eco88I | CYCGRG | 2 cut(s) | 268, 1164 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1692 |
| EcoRI | GAATTC | 5 cut(s) | 526, 1066, 1093, 1612, 1877 |
| EcoRII | CCWGG | 3 cut(s) | 1456, 1992, 2119 |
| EcoRV | GATATC | 1 cut(s) | 723 |
| EcoT14I | CCWWGG | 2 cut(s) | 226, 1639 |
| EcoT22I | ATGCAT | 1 cut(s) | 1679 |
| EcoT38I | GRGCYC | 1 cut(s) | 1171 |
| ErhI | CCWWGG | 2 cut(s) | 226, 1639 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1879, 1911 |
| FaqI | GGGAC | 2 cut(s) | 1705, 2233 |
| FauI | CCCGC | 6 cut(s) | 454, 474, 570, 1587, 1703, 1934 |
| FbaI | TGATCA | 2 cut(s) | 1224, 1620 |
| Fnu4HI | GCNGC | 5 cut(s) | 197, 1431, 1980, 2049, 2141 |
| FokI | GGATG | 6 cut(s) | 310, 578, 764, 1316, 2136, 2207 |
| FriOI | GRGCYC | 1 cut(s) | 1171 |
| Fsp4HI | GCNGC | 5 cut(s) | 197, 1431, 1980, 2049, 2141 |
| FspBI | CTAG | 3 cut(s) | 714, 1160, 1971 |
| GlaI | GCGC | 3 cut(s) | 5, 7, 480 |
| GluI | GCNGC | 5 cut(s) | 197, 1431, 1980, 2049, 2141 |
| GsaI | CCCAGC | 2 cut(s) | 543, 1857 |
| GsuI | CTGGAG | 1 cut(s) | 2015 |
| HaeIII | GGCC | 2 cut(s) | 231, 1476 |
| HapII | CCGG | 1 cut(s) | 1165 |
| HgaI | GACGC | 1 cut(s) | 1571 |
| HhaI | GCGC | 3 cut(s) | 6, 8, 481 |
| Hin1I | GRCGYC | 1 cut(s) | 1217 |
| Hin6I | GCGC | 3 cut(s) | 4, 6, 479 |
| HinP1I | GCGC | 3 cut(s) | 4, 6, 479 |
| HinfI | GANTC | 4 cut(s) | 143, 1499, 1657, 2233 |
| HpaII | CCGG | 1 cut(s) | 1165 |
| HphI | GGTGA | 2 cut(s) | 1693, 1961 |
| Hpy166II | GTNNAC | 5 cut(s) | 241, 432, 711, 988, 1756 |
| Hpy188III | TCNNGA | 7 cut(s) | 111, 270, 1063, 1090, 1276, 1451, 2169 |
| Hpy8I | GTNNAC | 5 cut(s) | 241, 432, 711, 988, 1756 |
| HpyAV | CCTTC | 5 cut(s) | 46, 868, 1379, 1852, 2079 |
| HpyCH4III | ACNGT | 5 cut(s) | 734, 884, 992, 1467, 1571 |
| HpyCH4IV | ACGT | 2 cut(s) | 707, 1217 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1310, 1436, 1571, 1967, 1976 |
| HpySE526I | ACGT | 2 cut(s) | 707, 1217 |
| Hsp92I | GRCGYC | 1 cut(s) | 1217 |
| HspAI | GCGC | 3 cut(s) | 4, 6, 479 |
| KflI | GGGWCCC | 1 cut(s) | 1692 |
| Ksp22I | TGATCA | 2 cut(s) | 1224, 1620 |
| LmnI | GCTCC | 4 cut(s) | 569, 1427, 1816, 1996 |
| Lsp1109I | GCAGC | 4 cut(s) | 183, 1417, 1991, 2127 |
| LweI | GCATC | 9 cut(s) | 53, 288, 396, 448, 484, 489, 1285, 2114, 2190 |
| MaeI | CTAG | 3 cut(s) | 714, 1160, 1971 |
| MaeII | ACGT | 2 cut(s) | 707, 1217 |
| MaeIII | GTNAC | 6 cut(s) | 331, 728, 884, 1139, 1708, 2036 |
| MboII | GAAGA | 9 cut(s) | 146, 613, 671, 1412, 1675, 1832, 1886, 2152, 2160 |
| MflI | RGATCY | 3 cut(s) | 1206, 1665, 2002 |
| MhlI | GDGCHC | 3 cut(s) | 444, 1171, 1329 |
| MlyI | GAGTC | 1 cut(s) | 1651 |
| MmeI | TCCRAC | 2 cut(s) | 1225, 2111 |
| Mph1103I | ATGCAT | 1 cut(s) | 1679 |
| MroXI | GAANNNNTTC | 1 cut(s) | 836 |
| MseI | TTAA | 6 cut(s) | 867, 1134, 1515, 1836, 2009, 2154 |
| MslI | CAYNNNNRTG | 5 cut(s) | 231, 1040, 1622, 1644, 1650 |
| MspI | CCGG | 1 cut(s) | 1165 |
| MspR9I | CCNGG | 5 cut(s) | 1165, 1166, 1458, 1994, 2121 |
| Mva1269I | GAATGC | 3 cut(s) | 625, 1574, 1679 |
| MvaI | CCWGG | 3 cut(s) | 1458, 1994, 2121 |
| MvnI | CGCG | 2 cut(s) | 6, 481 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1310, 1436, 1571, 1967, 1976 |
| NciI | CCSGG | 2 cut(s) | 1165, 1166 |
| NcoI | CCATGG | 2 cut(s) | 226, 1639 |
| NheI | GCTAGC | 1 cut(s) | 1159 |
| NlaIV | GGNNCC | 4 cut(s) | 1693, 1694, 2004, 2118 |
| NmuCI | GTSAC | 3 cut(s) | 331, 884, 1708 |
| NsiI | ATGCAT | 1 cut(s) | 1679 |
| NspI | RCATGY | 4 cut(s) | 974, 1045, 1649, 1737 |
| PaeR7I | CTCGAG | 1 cut(s) | 268 |
| PagI | TCATGA | 1 cut(s) | 1062 |
| PaqCI | CACCTGC | 1 cut(s) | 2026 |
| PauI | GCGCGC | 1 cut(s) | 4 |
| PciI | ACATGT | 1 cut(s) | 1041 |
| PctI | GAATGC | 3 cut(s) | 625, 1574, 1679 |
| PdmI | GAANNNNTTC | 1 cut(s) | 836 |
| PfeI | GAWTC | 3 cut(s) | 143, 1499, 2233 |
| PfoI | TCCNGGA | 2 cut(s) | 1992, 2119 |
| PkrI | GCNGC | 5 cut(s) | 198, 1432, 1981, 2050, 2142 |
| PleI | GAGTC | 1 cut(s) | 1651 |
| PpsI | GAGTC | 1 cut(s) | 1651 |
| Ppu21I | YACGTR | 1 cut(s) | 708 |
| PpuMI | RGGWCCY | 1 cut(s) | 1692 |
| PscI | ACATGT | 1 cut(s) | 1041 |
| PshBI | ATTAAT | 1 cut(s) | 1134 |
| PsiI | TTATAA | 1 cut(s) | 339 |
| Psp5II | RGGWCCY | 1 cut(s) | 1692 |
| Psp6I | CCWGG | 3 cut(s) | 1456, 1992, 2119 |
| PspFI | CCCAGC | 2 cut(s) | 539, 1853 |
| PspGI | CCWGG | 3 cut(s) | 1456, 1992, 2119 |
| PspN4I | GGNNCC | 4 cut(s) | 1693, 1694, 2004, 2118 |
| PspPI | GGNCC | 1 cut(s) | 1692 |
| PspPPI | RGGWCCY | 1 cut(s) | 1692 |
| PsuI | RGATCY | 3 cut(s) | 1206, 1665, 2002 |
| PteI | GCGCGC | 1 cut(s) | 4 |
| RsaI | GTAC | 3 cut(s) | 1046, 1076, 1108 |
| RsaNI | GTAC | 3 cut(s) | 1045, 1075, 1107 |
| RseI | CAYNNNNRTG | 5 cut(s) | 231, 1040, 1622, 1644, 1650 |
| SaqAI | TTAA | 6 cut(s) | 867, 1134, 1515, 1836, 2009, 2154 |
| SatI | GCNGC | 5 cut(s) | 197, 1431, 1980, 2049, 2141 |
| Sau96I | GGNCC | 1 cut(s) | 1692 |
| SchI | GAGTC | 1 cut(s) | 1651 |
| ScrFI | CCNGG | 5 cut(s) | 1165, 1166, 1458, 1994, 2121 |
| SduI | GDGCHC | 3 cut(s) | 444, 1171, 1329 |
| SfaNI | GCATC | 9 cut(s) | 53, 288, 396, 448, 484, 489, 1285, 2114, 2190 |
| SfcI | CTRYAG | 1 cut(s) | 733 |
| Sfr274I | CTCGAG | 1 cut(s) | 268 |
| SinI | GGWCC | 1 cut(s) | 1692 |
| SlaI | CTCGAG | 1 cut(s) | 268 |
| SmaI | CCCGGG | 1 cut(s) | 1166 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 231, 1040, 1622, 1644, 1650 |
| SmlI | CTYRAG | 2 cut(s) | 200, 268 |
| SmoI | CTYRAG | 2 cut(s) | 200, 268 |
| SrfI | GCCCGGGC | 1 cut(s) | 1166 |
| SsiI | CCGC | 8 cut(s) | 391, 461, 481, 577, 1594, 1696, 1941, 2049 |
| SspI | AATATT | 1 cut(s) | 1792 |
| SspMI | CTAG | 3 cut(s) | 714, 1160, 1971 |
| StyD4I | CCNGG | 5 cut(s) | 1163, 1164, 1456, 1992, 2119 |
| StyI | CCWWGG | 2 cut(s) | 226, 1639 |
| TaaI | ACNGT | 5 cut(s) | 734, 884, 992, 1467, 1571 |
| TaiI | ACGT | 2 cut(s) | 710, 1220 |
| TaqI | TCGA | 2 cut(s) | 61, 269 |
| TatI | WGTACW | 2 cut(s) | 1044, 1106 |
| TauI | GCSGC | 1 cut(s) | 2051 |
| TfiI | GAWTC | 3 cut(s) | 143, 1499, 2233 |
| Tru1I | TTAA | 6 cut(s) | 867, 1134, 1515, 1836, 2009, 2154 |
| Tru9I | TTAA | 6 cut(s) | 867, 1134, 1515, 1836, 2009, 2154 |
| TscAI | CASTG | 4 cut(s) | 248, 444, 1234, 1530 |
| TseFI | GTSAC | 3 cut(s) | 331, 884, 1708 |
| TseI | GCWGC | 4 cut(s) | 196, 1430, 1979, 2140 |
| Tsp45I | GTSAC | 3 cut(s) | 331, 884, 1708 |
| TspDTI | ATGAA | 7 cut(s) | 105, 146, 614, 1079, 1512, 1596, 1686 |
| TspMI | CCCGGG | 1 cut(s) | 1164 |
| TspRI | CASTG | 4 cut(s) | 248, 444, 1234, 1530 |
| VpaK11BI | GGWCC | 1 cut(s) | 1692 |
| VspI | ATTAAT | 1 cut(s) | 1134 |
| XapI | RAATTY | 7 cut(s) | 526, 1066, 1093, 1402, 1612, 1702, 1877 |
| XceI | RCATGY | 4 cut(s) | 974, 1045, 1649, 1737 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 176, 1990 |
| XhoI | CTCGAG | 1 cut(s) | 268 |
| XmaI | CCCGGG | 1 cut(s) | 1164 |
| XmnI | GAANNNNTTC | 1 cut(s) | 836 |
| XspI | CTAG | 3 cut(s) | 714, 1160, 1971 |
| ZraI | GACGTC | 1 cut(s) | 1218 |
| Zsp2I | ATGCAT | 1 cut(s) | 1679 |