Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0012180

Physical Location & Seq

Genomic Coordinates Forward (+)

45911930 .. 45913972

Gene Structure 2043 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000003235

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2043 bp

ATGCCTCGCAGAGATGTTCATGATAGCATTGTTCGTTGGACTTGTTTGGTTACTAAGTACTCGAGAGGCGGTTGGGTCGATGAGGCTCGGATGCTGTTTGATATCATGCCGGAGAGAAATGTGGTCACTTATAATGCTATGCTGTCGGGGTATGTGCAGTCTGGGAGGTTGAGTGAGGGTTGTCAGTTTTTTGAGGAGATGCCGGAGAGGAATGTGGTGTCGTGGACTTCGATGCTGTGTGGGTTGGCTGGTGCGGGGATGATTGAGGAGGCGAAGCGGTTGTTTGAGGAAATGCCAGAGAGGAATGTTGTTTCTTGGAATTCGATGATTGCTGGGTTGGTTAAGAATGGGGACTTGGAGGGAGCAAGGGAGGTTTTTGACCAGATGCGGATGAAGAATGTTGTTTCTTGTAATGCTATGATTGGTGGGTATGCGGAGCATTGTAGAATGGATGAGGCCAGAGCTTTGTTTGATGGGATGCTGGACAGGAATGTGATTACTTGGACTAGTATGATATCTGGTTATTGTAGGTCTGGCAATGTGGATGAAGGGTATGCTTTGTTTTGCAAAATGCCAGAGAGGAATGTTGTTTCTTGGACAGCCATGATTGGTGGCTTTGCTTGGAATGGATTTTATAAAGAAGCTCTATTGTTATTCCTTGAATGGAATGGGAACTATGAAACAAGACCAAATGGAGAGACGTTCATATCGCTTGTATATGCTTGTGCTGGTATTGGGTTGCCTCATCTTGGAAAGCAACTACATGCTCAGTTGATTGTCAACAATTGGGACCATGATGATTATGATGGCAGGCTATCAAAGAGCCTCATTCACATGTACTCGGCGTATGGTGTCATGGATTATGCAGATTTTCTGTTTATGAAGCATTCAAGTACTCGTAGTGTTCAGTCTTGTAATTCTATGATTAATGGTTACTTACAGATTGGGCAACTAGAACAAGCTCAGAATCTCTTTGACAGACTACCAATCCGAGACAAGATCTCTTGGACGTCTTTGATCACCGGGTATTTCAATGTTGGGGAAGTATCAAAGGCTTGTTATCTGTTCCAAATTATGCCAGATAGGGATGCAATTTCATGGACAGCGATGATTTCAGGGCACGTCCAAAATGAGCTTTTTGCAGAAGCCACTGATCTCTTCTTTAAAATGCGTTCAGAAAATGTTTCGCCTCTGAATTCAACATATTCAGTTCTTCTTGGAGTTGCTGGTGCAATGTCATATCTTGATTCTGGGAGACAGTTCCATGGCCTTCTGATAAAAACACATTATGAACTTGACTTGTTTATTAGTAACTCACTGATCTCTATGTATGCCAAATGTGGGGAGATAGATGACGCTTACCGTGCATTCTCAAACATGAGTTTGCGGGATTTGATTTCTTGGAATTCCATGATCATGGGGTTTTCTGACCATGGGCATGCAAATGAAGCTCTGAAGATCTTTGAAGCAATGGAACAATCTGGGGCTCACCCGAATTCTGTAACTTTTTTGGGCATCCTGTCAGCATGTAGCCATGCAGGGCTAGTCCATAGAGGATGGGAGTTTTTTAATGCCATGAGTGATGTTTATGGAATTCAACCAGCTTCAGAGCATTGCATTTGTATGATTAATCTTTTGGGTAGAGCTGGGAAGGTAAAGGAAGCCCAAGAATTGGTTTGGAGGCTACCTTTCAAACCAGATCCTGCTGTTTGGGGAGCATTGCTTGGTATATGTGGGCTCGGTAAGACAAATGCCGAGGTTGCTAAATATGCGGCCAAACAACTCCTGGAGCTGGATCCCTTAAATGCACCAGCCCATGTGGTCCTTTGTAACATATATGCAGCAAATGGTATGCATATTGAGGAAAAATCACTGAGAAGGGAGATGGGGTTGAAAGGAGTTAGAAAGGTTCCTGGGTGCAGTTGGATTCTGGTGCAAGGGAGAGTTAATGTATTCCTCTCTGGAGATAAATTACACCCAAATGTTGAGGAGATGCTGTCAATCCTATTTGGCACCATTGGTGAATCACAAAAAACAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

681

Amino Acids

76.23

Weight (kDa)

5.78

Isoelectric Point (pI)

39.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	39 - 72	4e-08	PPR repeat family
PPR_1	PF12854	39 - 67	2.5e-06	PPR repeat
PPR	PF01535	42 - 72	5.6e-08	PPR repeat
PPR_2	PF13041	70 - 103	8.6e-07	PPR repeat family
PPR	PF01535	73 - 103	2.7e-07	PPR repeat
PPR_2	PF13041	101 - 134	5e-08	PPR repeat family
PPR_1	PF12854	101 - 130	3e-06	PPR repeat
PPR	PF01535	104 - 134	8.7e-09	PPR repeat
PPR_2	PF13041	132 - 165	2.1e-06	PPR repeat family
PPR_1	PF12854	161 - 191	5.6e-10	PPR repeat
PPR_2	PF13041	163 - 196	3.2e-08	PPR repeat family
PPR	PF01535	166 - 196	1.3e-09	PPR repeat
PPR_2	PF13041	363 - 406	2.2e-07	PPR repeat family
PPR_2	PF13041	464 - 511	8.5e-11	PPR repeat family
PPR	PF01535	466 - 495	1.6e-06	PPR repeat
E_motif	PF20431	584 - 643	2.1e-14	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0012180)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32415
fragaria_vesca	FvH4_5g21130 FvH4_5g21130 FvH4_5g21130
malus_domestica	MD06G1040900.v1.1
prunus_persica	Prupe.5G047200_v2.0.a1
pyrus_communis	pycom06g03410
rosa_chinensis	RchiOBHm_Chr7g0208251
rosa_laevigata	RLG00000003235
rosa_multiflora	Rmu_sc0000841.1_g000023 Rmu_sc0000841.1_g000024 Rmu_sc0007869.1_g000019
rosa_roxburghii	Rroxscaffold_3G00250640
rosa_rugosa	Rorug07G0102500
rosa_samantha	Rh7AG236700 Rh7BG232300 Rh7CG252600 Rh7DG242700
rosa_wichuraiana	Rw7G020200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	132, 636
AatII	GACGTC	1 cut(s)	1013
AccB1I	GGYRCC	1 cut(s)	2012
AccB7I	CCANNNNNTGG	1 cut(s)	1672
AciI	CCGC	7 cut(s)	69, 254, 277, 388, 434, 1387, 1772
AclWI	GGATC	3 cut(s)	1694, 1790, 1803
AcoI	YGGCCR	1 cut(s)	1773
AcsI	RAATTY	5 cut(s)	319, 1195, 1405, 1495, 1593
AcuI	CTGAAG	2 cut(s)	1475, 1590
AcyI	GRCGYC	1 cut(s)	1010
AfaI	GTAC	3 cut(s)	59, 839, 895
AfiI	CCNNNNNNNGG	4 cut(s)	749, 1341, 1672, 1792
AflIII	ACRYGT	1 cut(s)	834
AgsI	TTSAA	8 cut(s)	662, 891, 1033, 1200, 1466, 1598, 1693, 1894
AhlI	ACTAGT	1 cut(s)	506
AjiI	CACGTC	1 cut(s)	1123
AjnI	CCWGG	2 cut(s)	1785, 1912
AjuI	GAANNNNNNNTTGG	2 cut(s)	338, 370
AluBI	AGCT	8 cut(s)	464, 644, 962, 1135, 1451, 1604, 1646, 1792
AluI	AGCT	8 cut(s)	464, 644, 962, 1135, 1451, 1604, 1646, 1792
Alw26I	GTCTC	3 cut(s)	692, 987, 1249
AlwI	GGATC	3 cut(s)	1694, 1790, 1803
AlwNI	CAGNNNCTG	1 cut(s)	1703
Ama87I	CYCGRG	1 cut(s)	61
AoxI	GGCC	3 cut(s)	456, 1267, 1773
ApeKI	GCWGC	1 cut(s)	1841
ApoI	RAATTY	5 cut(s)	319, 1195, 1405, 1495, 1593
AseI	ATTAAT	2 cut(s)	927, 1629
AspS9I	GGNCC	2 cut(s)	790, 1822
AsuC2I	CCSGG	1 cut(s)	1024
AsuHPI	GGTGA	3 cut(s)	1012, 1481, 2033
AvaI	CYCGRG	1 cut(s)	61
AvaII	GGWCC	2 cut(s)	790, 1822
BaeGI	GKGCMC	1 cut(s)	1122
BamHI	GGATCC	1 cut(s)	1795
BanI	GGYRCC	1 cut(s)	2012
BanII	GRGCYC	2 cut(s)	1489, 1740
BbvI	GCAGC	1 cut(s)	1853
BccI	CCATC	4 cut(s)	467, 800, 1551, 1879
BciT130I	CCWGG	2 cut(s)	1787, 1914
BclI	TGATCA	2 cut(s)	1017, 1413
BcnI	CCSGG	1 cut(s)	1024
BcoDI	GTCTC	3 cut(s)	692, 987, 1249
BcuI	ACTAGT	1 cut(s)	506
BfaI	CTAG	3 cut(s)	507, 953, 1544
BglII	AGATCT	2 cut(s)	999, 1458
BisI	GCNGC	2 cut(s)	1773, 1842
BlsI	GCNGC	2 cut(s)	1774, 1843
BmcAI	AGTACT	2 cut(s)	59, 895
Bme1390I	CCNGG	3 cut(s)	1024, 1787, 1914
Bme18I	GGWCC	2 cut(s)	790, 1822
BmeT110I	CYCGRG	1 cut(s)	61
BmgBI	CACGTC	1 cut(s)	1123
BmgT120I	GGNCC	2 cut(s)	790, 1822
BmiI	GGNNCC	4 cut(s)	791, 1797, 1911, 2014
BmrFI	CCNGG	3 cut(s)	1024, 1787, 1914
BmsI	GCATC	8 cut(s)	81, 189, 222, 375, 468, 1078, 1524, 1983
BpmI	CTGGAG	2 cut(s)	1808, 1983
BpuMI	CCSGG	1 cut(s)	1024
BsaHI	GRCGYC	1 cut(s)	1010
BsaJI	CCNNGG	4 cut(s)	1264, 1432, 1755, 1913
BsaXI	ACNNNNNCTCC	6 cut(s)	157, 187, 1874, 1904, 1982, 2012
Bsc4I	CCNNNNNNNGG	4 cut(s)	749, 1341, 1672, 1792
Bse3DI	GCAATG	5 cut(s)	544, 1239, 1476, 1612, 1718
BseBI	CCWGG	2 cut(s)	1787, 1914
BseDI	CCNNGG	4 cut(s)	1264, 1432, 1755, 1913
BseGI	GGATG	9 cut(s)	96, 264, 396, 457, 483, 550, 1093, 1515, 1562
BseLI	CCNNNNNNNGG	4 cut(s)	749, 1341, 1672, 1792
BseMI	GCAATG	5 cut(s)	544, 1239, 1476, 1612, 1718
BseMII	CTCAG	3 cut(s)	782, 977, 1865
BseRI	GAGGAG	3 cut(s)	209, 281, 2003
BseSI	GKGCMC	1 cut(s)	1122
BseXI	GCAGC	1 cut(s)	1853
BseYI	CCCAGC	2 cut(s)	332, 1646
BsgI	GTGCAG	2 cut(s)	176, 1939
BshFI	GGCC	3 cut(s)	458, 1269, 1775
BshNI	GGYRCC	1 cut(s)	2012
BsiHKCI	CYCGRG	1 cut(s)	61
BsiSI	CCGG	3 cut(s)	110, 203, 1023
BslFI	GGGAC	2 cut(s)	365, 803
BslI	CCNNNNNNNGG	4 cut(s)	749, 1341, 1672, 1792
BsmAI	GTCTC	3 cut(s)	692, 987, 1249
BsmBI	CGTCTC	1 cut(s)	692
BsmFI	GGGAC	2 cut(s)	365, 803
BsmI	GAATGC	2 cut(s)	886, 1367
BsnI	GGCC	3 cut(s)	458, 1269, 1775
BsoBI	CYCGRG	1 cut(s)	61
Bsp1286I	GDGCHC	3 cut(s)	1122, 1489, 1740
Bsp143I	GATC	8 cut(s)	999, 1017, 1153, 1320, 1413, 1458, 1699, 1795
Bsp19I	CCATGG	2 cut(s)	1264, 1432
BspACI	CCGC	7 cut(s)	69, 254, 277, 388, 434, 1387, 1772
BspANI	GGCC	3 cut(s)	458, 1269, 1775
BspCNI	CTCAG	3 cut(s)	781, 976, 1866
BspHI	TCATGA	1 cut(s)	19
BspLI	GGNNCC	4 cut(s)	791, 1797, 1911, 2014
BspPI	GGATC	3 cut(s)	1694, 1790, 1803
BspT107I	GGYRCC	1 cut(s)	2012
BsrDI	GCAATG	5 cut(s)	544, 1239, 1476, 1612, 1718
BssECI	CCNNGG	4 cut(s)	1264, 1432, 1755, 1913
BssMI	GATC	8 cut(s)	999, 1017, 1153, 1320, 1413, 1458, 1699, 1795
BssNI	GRCGYC	1 cut(s)	1010
BssT1I	CCWWGG	2 cut(s)	1264, 1432
Bst2UI	CCWGG	2 cut(s)	1787, 1914
Bst4CI	ACNGT	3 cut(s)	1260, 1364, 2038
Bst6I	CTCTTC	1 cut(s)	1163
BstACI	GRCGYC	1 cut(s)	1010
BstC8I	GCNNGC	2 cut(s)	812, 1440
BstDEI	CTNAG	4 cut(s)	54, 768, 963, 1874
BstDSI	CCRYGG	2 cut(s)	1264, 1432
BstF5I	GGATG	9 cut(s)	96, 264, 396, 457, 483, 550, 1093, 1515, 1562
BstKTI	GATC	8 cut(s)	1002, 1020, 1156, 1323, 1416, 1461, 1702, 1798
BstMAI	GTCTC	3 cut(s)	692, 987, 1249
BstMBI	GATC	8 cut(s)	999, 1017, 1153, 1320, 1413, 1458, 1699, 1795
BstMWI	GCNNNNNNNGC	4 cut(s)	1364, 1448, 1760, 1769
BstNI	CCWGG	2 cut(s)	1787, 1914
BstNSI	RCATGY	4 cut(s)	767, 838, 1442, 1530
BstSCI	CCNGG	3 cut(s)	1022, 1785, 1912
BstSLI	GKGCMC	1 cut(s)	1122
BstV1I	GCAGC	1 cut(s)	1853
BstX2I	RGATCY	4 cut(s)	999, 1458, 1699, 1795
BstXI	CCANNNNNNTGG	1 cut(s)	1417
BstYI	RGATCY	4 cut(s)	999, 1458, 1699, 1795
BsuRI	GGCC	3 cut(s)	458, 1269, 1775
BtgI	CCRYGG	2 cut(s)	1264, 1432
BtgZI	GCGATG	1 cut(s)	1121
BtrI	CACGTC	1 cut(s)	1123
BtsCI	GGATG	9 cut(s)	96, 264, 396, 457, 483, 550, 1093, 1515, 1562
BtsIMutI	CAGTG	3 cut(s)	1149, 1316, 1871
Cac8I	GCNNGC	2 cut(s)	812, 1440
CaiI	CAGNNNCTG	1 cut(s)	1703
CciI	TCATGA	1 cut(s)	19
Cfr13I	GGNCC	2 cut(s)	790, 1822
CseI	GACGC	1 cut(s)	1364
Csp6I	GTAC	3 cut(s)	58, 838, 894
CviQI	GTAC	3 cut(s)	58, 838, 894
DdeI	CTNAG	4 cut(s)	54, 768, 963, 1874
DpnI	GATC	8 cut(s)	1001, 1019, 1155, 1322, 1415, 1460, 1701, 1797
DpnII	GATC	8 cut(s)	999, 1017, 1153, 1320, 1413, 1458, 1699, 1795
DraI	TTTAAA	1 cut(s)	1165
EaeI	YGGCCR	1 cut(s)	1773
Eam1104I	CTCTTC	1 cut(s)	1163
EarI	CTCTTC	1 cut(s)	1163
Eco130I	CCWWGG	2 cut(s)	1264, 1432
Eco24I	GRGCYC	2 cut(s)	1489, 1740
Eco32I	GATATC	2 cut(s)	103, 516
Eco47I	GGWCC	2 cut(s)	790, 1822
Eco57I	CTGAAG	2 cut(s)	1475, 1590
Eco88I	CYCGRG	1 cut(s)	61
EcoRI	GAATTC	5 cut(s)	319, 1195, 1405, 1495, 1593
EcoRII	CCWGG	2 cut(s)	1785, 1912
EcoRV	GATATC	2 cut(s)	103, 516
EcoT14I	CCWWGG	2 cut(s)	1264, 1432
EcoT22I	ATGCAT	1 cut(s)	1857
EcoT38I	GRGCYC	2 cut(s)	1489, 1740
ErhI	CCWWGG	2 cut(s)	1264, 1432
Esp3I	CGTCTC	1 cut(s)	692
FaqI	GGGAC	2 cut(s)	365, 803
FauI	CCCGC	2 cut(s)	247, 1380
FbaI	TGATCA	2 cut(s)	1017, 1413
Fnu4HI	GCNGC	2 cut(s)	1773, 1842
FokI	GGATG	9 cut(s)	103, 271, 403, 464, 490, 557, 1100, 1502, 1569
FriOI	GRGCYC	2 cut(s)	1489, 1740
Fsp4HI	GCNGC	2 cut(s)	1773, 1842
FspBI	CTAG	3 cut(s)	507, 953, 1544
GluI	GCNGC	2 cut(s)	1773, 1842
GsaI	CCCAGC	2 cut(s)	336, 1650
GsuI	CTGGAG	2 cut(s)	1808, 1983
HaeIII	GGCC	3 cut(s)	458, 1269, 1775
HapII	CCGG	3 cut(s)	110, 203, 1023
HgaI	GACGC	1 cut(s)	1364
Hin1I	GRCGYC	1 cut(s)	1010
HincII	GTYRAC	1 cut(s)	781
HindII	GTYRAC	1 cut(s)	781
HinfI	GANTC	4 cut(s)	967, 1247, 1927, 2024
HpaII	CCGG	3 cut(s)	110, 203, 1023
HphI	GGTGA	3 cut(s)	1012, 1481, 2033
Hpy166II	GTNNAC	2 cut(s)	225, 781
Hpy188I	TCNGA	9 cut(s)	90, 966, 992, 1177, 1194, 1275, 1429, 1455, 1609
Hpy188III	TCNNGA	4 cut(s)	20, 63, 1244, 1962
Hpy8I	GTNNAC	2 cut(s)	225, 781
HpyAV	CCTTC	4 cut(s)	542, 1280, 1645, 1872
HpyCH4III	ACNGT	3 cut(s)	1260, 1364, 2038
HpyCH4IV	ACGT	3 cut(s)	701, 1010, 1122
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1364, 1448, 1760, 1769
HpyF3I	CTNAG	4 cut(s)	54, 768, 963, 1874
HpySE526I	ACGT	3 cut(s)	701, 1010, 1122
Hsp92I	GRCGYC	1 cut(s)	1010
Ksp22I	TGATCA	2 cut(s)	1017, 1413
Kzo9I	GATC	8 cut(s)	999, 1017, 1153, 1320, 1413, 1458, 1699, 1795
LmnI	GCTCC	4 cut(s)	362, 436, 1715, 1789
Lsp1109I	GCAGC	1 cut(s)	1853
LweI	GCATC	8 cut(s)	81, 189, 222, 375, 468, 1078, 1524, 1983
MaeI	CTAG	3 cut(s)	507, 953, 1544
MaeII	ACGT	3 cut(s)	701, 1010, 1122
MaeIII	GTNAC	6 cut(s)	49, 124, 932, 1310, 1501, 1829
MalI	GATC	8 cut(s)	1001, 1019, 1155, 1322, 1415, 1460, 1701, 1797
MboI	GATC	8 cut(s)	999, 1017, 1153, 1320, 1413, 1458, 1699, 1795
MboII	GAAGA	4 cut(s)	406, 1150, 1205, 1468
MfeI	CAATTG	1 cut(s)	784
MflI	RGATCY	4 cut(s)	999, 1458, 1699, 1795
MhlI	GDGCHC	3 cut(s)	1122, 1489, 1740
MmeI	TCCRAC	2 cut(s)	17, 1904
Mph1103I	ATGCAT	1 cut(s)	1857
MseI	TTAA	7 cut(s)	342, 927, 1164, 1569, 1629, 1802, 1947
MslI	CAYNNNNRTG	6 cut(s)	833, 1415, 1437, 1443, 1622, 1980
MspI	CCGG	3 cut(s)	110, 203, 1023
MspR9I	CCNGG	3 cut(s)	1024, 1787, 1914
MunI	CAATTG	1 cut(s)	784
Mva1269I	GAATGC	2 cut(s)	886, 1367
MvaI	CCWGG	2 cut(s)	1787, 1914
MwoI	GCNNNNNNNGC	4 cut(s)	1364, 1448, 1760, 1769
NciI	CCSGG	1 cut(s)	1024
NcoI	CCATGG	2 cut(s)	1264, 1432
NdeII	GATC	8 cut(s)	999, 1017, 1153, 1320, 1413, 1458, 1699, 1795
NlaIV	GGNNCC	4 cut(s)	791, 1797, 1911, 2014
NmeAIII	GCCGAG	2 cut(s)	821, 1780
NmuCI	GTSAC	1 cut(s)	124
NsiI	ATGCAT	1 cut(s)	1857
NspI	RCATGY	4 cut(s)	767, 838, 1442, 1530
PaeI	GCATGC	1 cut(s)	1442
PaeR7I	CTCGAG	1 cut(s)	61
PagI	TCATGA	1 cut(s)	19
PciI	ACATGT	1 cut(s)	834
PcsI	WCGNNNNNNNCGW	1 cut(s)	227
PctI	GAATGC	2 cut(s)	886, 1367
PfeI	GAWTC	4 cut(s)	967, 1247, 1927, 2024
PflMI	CCANNNNNTGG	1 cut(s)	1672
PfoI	TCCNGGA	1 cut(s)	1785
PkrI	GCNGC	2 cut(s)	1774, 1843
PscI	ACATGT	1 cut(s)	834
PshBI	ATTAAT	2 cut(s)	927, 1629
PsiI	TTATAA	2 cut(s)	132, 636
Psp6I	CCWGG	2 cut(s)	1785, 1912
PspFI	CCCAGC	2 cut(s)	332, 1646
PspGI	CCWGG	2 cut(s)	1785, 1912
PspN4I	GGNNCC	4 cut(s)	791, 1797, 1911, 2014
PspPI	GGNCC	2 cut(s)	790, 1822
PstNI	CAGNNNCTG	1 cut(s)	1703
PsuI	RGATCY	4 cut(s)	999, 1458, 1699, 1795
RsaI	GTAC	3 cut(s)	59, 839, 895
RsaNI	GTAC	3 cut(s)	58, 838, 894
RseI	CAYNNNNRTG	6 cut(s)	833, 1415, 1437, 1443, 1622, 1980
SaqAI	TTAA	7 cut(s)	342, 927, 1164, 1569, 1629, 1802, 1947
SatI	GCNGC	2 cut(s)	1773, 1842
Sau3AI	GATC	8 cut(s)	999, 1017, 1153, 1320, 1413, 1458, 1699, 1795
Sau96I	GGNCC	2 cut(s)	790, 1822
ScaI	AGTACT	2 cut(s)	59, 895
ScrFI	CCNGG	3 cut(s)	1024, 1787, 1914
SduI	GDGCHC	3 cut(s)	1122, 1489, 1740
SfaNI	GCATC	8 cut(s)	81, 189, 222, 375, 468, 1078, 1524, 1983
Sfr274I	CTCGAG	1 cut(s)	61
SinI	GGWCC	2 cut(s)	790, 1822
SlaI	CTCGAG	1 cut(s)	61
SmiMI	CAYNNNNRTG	6 cut(s)	833, 1415, 1437, 1443, 1622, 1980
SmlI	CTYRAG	1 cut(s)	61
SmoI	CTYRAG	1 cut(s)	61
SpeI	ACTAGT	1 cut(s)	506
SphI	GCATGC	1 cut(s)	1442
SsiI	CCGC	7 cut(s)	69, 254, 277, 388, 434, 1387, 1772
SspMI	CTAG	3 cut(s)	507, 953, 1544
StyD4I	CCNGG	3 cut(s)	1022, 1785, 1912
StyI	CCWWGG	2 cut(s)	1264, 1432
TaaI	ACNGT	3 cut(s)	1260, 1364, 2038
TaiI	ACGT	3 cut(s)	704, 1013, 1125
TaqI	TCGA	4 cut(s)	62, 78, 230, 323
TatI	WGTACW	3 cut(s)	57, 837, 893
TauI	GCSGC	1 cut(s)	1775
TfiI	GAWTC	4 cut(s)	967, 1247, 1927, 2024
Tru1I	TTAA	7 cut(s)	342, 927, 1164, 1569, 1629, 1802, 1947
Tru9I	TTAA	7 cut(s)	342, 927, 1164, 1569, 1629, 1802, 1947
TscAI	CASTG	3 cut(s)	1156, 1323, 1878
TseFI	GTSAC	1 cut(s)	124
TseI	GCWGC	1 cut(s)	1841
Tsp45I	GTSAC	1 cut(s)	124
TspDTI	ATGAA	9 cut(s)	8, 407, 561, 693, 694, 896, 1086, 1305, 1461
TspRI	CASTG	3 cut(s)	1156, 1323, 1878
Van91I	CCANNNNNTGG	1 cut(s)	1672
VpaK11BI	GGWCC	2 cut(s)	790, 1822
VspI	ATTAAT	2 cut(s)	927, 1629
XapI	RAATTY	5 cut(s)	319, 1195, 1405, 1495, 1593
XceI	RCATGY	4 cut(s)	767, 838, 1442, 1530
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1783
XhoI	CTCGAG	1 cut(s)	61
XspI	CTAG	3 cut(s)	507, 953, 1544
ZraI	GACGTC	1 cut(s)	1011
ZrmI	AGTACT	2 cut(s)	59, 895
Zsp2I	ATGCAT	1 cut(s)	1857

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.