AT1G50940

electron transfer flavoprotein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
18877812 .. 18880012
2201 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G50940.1

Sequence Viewer

Length: 1092 bp
ATGACGAGAACTGTTCTACTGAGAGCTCTGACGAAGAATAAGTTCGTCGCCTCTAATGCTCCTCGATCTATATCCATTTCCATCACCAGTCTCTCTAGATGCATTAGCACTCTGATTCTAGCAGAACATGAGAGTGGTACAATCAAACCTCAGACAGTGAGTACAGTAGTTGCAGCTAATTCATTAGGTGAGAGCTCTTCAATTTCTTTGTTATTGGCTGGTTCTGGTTCTTCTCTTCAAGAAGCTGCTTCTCAAGCTGCCTCTTGTCATCCTTCTGTTTCCGAGGTACTTGTTGCTGATTCTGATAAATTTGAGTACTCTTTAGCTGAGCCTTGGGCTAAATTGGTTGACTTTGTTCGGCAACAAGGAGATTACTCACACATTCTTGCTTCCTCTAGTTCATTTGGCAAGAATATATTACCCCGTGTCGCTGCTCTTTTAGATGTTTCTCCTATTACTGATGTTGTCAAAATCTTAGGATCTGACCAGTTTATCAGGCCTATTTATGCGGGAAACGCTTTGTGTACAGTTCGTTATACTGGTGCGGGTCCTTGTATGTTGACTATTAGATCTACATCTTTTCCTGTCACCCCGATTACAGCAAACTCAGAGTCAAAGAAAGCTACTGTCTCTCAGATTGATCTCTCAAATTTTGAAGACGACTCTGTCAGCAAATCTAGATATGTGGGACGTTCAACTCAGGATACAGAACGGCCTGATCTTGGAAGTGCACGTGTTGTGATCACTGGTGGAAGGGCGTTGAAGAGTGTTGAGAATTTTAAAATGATCGAAAAGCTTGCAGAAAAACTTGGTGGAGCAGTGGGCGCTACTCGTGCTGCTGTTGATGCTGGATATGTTCCTAATGATCTTCAGGTGGGGCAAACAGGTAAAATAGTAGCACCAGAGCTATACATGGCATTTGGTGTTTCAGGAGCCATTCAACACTTAGCTGGAATTAAGGATTCTAAGGTGATTGTTGCGGTTAATAAAGACGCCGATGCACCTATTTTCCAGGTAGCTGATTATGGACTCGTTGGAGATCTTTTCGAGGTGATACCGGAGTTGCTGGAGAAGCTTCCAGAAAAGAAATGA

Protein Analysis

363

Amino Acids

38.41

Weight (kDa)

6.46

Isoelectric Point (pI)

38.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ETF PF01012 37 - 215 2.8e-37 Electron transfer flavoprotein domain
ETF_alpha PF00766 240 - 320 2.1e-34 Electron transfer flavoprotein FAD-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014613)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G50940
fragaria_vesca FvH4_3g22000 FvH4_3g22000
malus_domestica MD03G1209400.v1.1
prunus_persica Prupe.4G205700_v2.0.a1
pyrus_communis pycom03g15820
rosa_chinensis RchiOBHm_Chr5g0037851
rosa_laevigata RLG00000033817
rosa_multiflora Rmu_sc0003735.1_g000010 Rmu_sc0005416.1_g000017
rosa_roxburghii Rroxscaffold_1G00043070
rosa_rugosa Rorug05G0168100
rosa_samantha Rh5AG257000 Rh5BG259400 Rh5CG292400 Rh5DG269300
rosa_wichuraiana Rw5G023830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 665
AciI CCGC 3 cut(s) 509, 545, 980
AclWI GGATC 1 cut(s) 487
AcsI RAATTY 3 cut(s) 308, 649, 775
AcuI CTGAAG 1 cut(s) 854
AcvI CACGTG 1 cut(s) 734
AcyI GRCGYC 1 cut(s) 993
AfaI GTAC 5 cut(s) 139, 163, 288, 317, 526
AfiI CCNNNNNNNGG 1 cut(s) 722
AflIII ACRYGT 1 cut(s) 733
AgsI TTSAA 6 cut(s) 201, 239, 656, 696, 763, 941
AjnI CCWGG 1 cut(s) 1011
Alw21I GWGCWC 3 cut(s) 28, 197, 733
Alw26I GTCTC 2 cut(s) 95, 634
Alw44I GTGCAC 1 cut(s) 729
AlwI GGATC 1 cut(s) 487
AoxI GGCC 2 cut(s) 497, 713
ApaLI GTGCAC 1 cut(s) 729
ApeKI GCWGC 5 cut(s) 173, 245, 257, 431, 836
ApoI RAATTY 3 cut(s) 308, 649, 775
ArsI GACNNNNNNTTYG 2 cut(s) 596, 628
Asp700I GAANNNNTTC 1 cut(s) 41
AspLEI GCGC 1 cut(s) 827
AspS9I GGNCC 1 cut(s) 548
AsuHPI GGTGA 5 cut(s) 76, 200, 580, 982, 1063
AvaII GGWCC 1 cut(s) 548
BaeGI GKGCMC 1 cut(s) 733
BaeI ACNNNNGTAYC 2 cut(s) 1046, 1079
BanII GRGCYC 2 cut(s) 28, 197
BauI CACGAG 1 cut(s) 831
BbrPI CACGTG 1 cut(s) 734
BbsI GAAGAC 1 cut(s) 663
Bbv12I GWGCWC 3 cut(s) 28, 197, 733
BbvI GCAGC 5 cut(s) 185, 232, 244, 418, 823
BccI CCATC 1 cut(s) 89
BceAI ACGGC 1 cut(s) 728
BcgI CGANNNNNNTGC 2 cut(s) 779, 813
BciT130I CCWGG 1 cut(s) 1013
BciVI GTATCC 1 cut(s) 697
BclI TGATCA 1 cut(s) 741
BcoDI GTCTC 2 cut(s) 95, 634
BfaI CTAG 4 cut(s) 96, 119, 396, 678
BfoI RGCGCY 1 cut(s) 828
BfuI GTATCC 1 cut(s) 697
BglII AGATCT 2 cut(s) 569, 1039
BisI GCNGC 5 cut(s) 174, 246, 258, 432, 837
BlpI GCTNAGC 1 cut(s) 327
BlsI GCNGC 5 cut(s) 175, 247, 259, 433, 838
BmcAI AGTACT 1 cut(s) 317
Bme1390I CCNGG 1 cut(s) 1013
Bme18I GGWCC 1 cut(s) 548
BmgT120I GGNCC 1 cut(s) 548
BmiI GGNNCC 2 cut(s) 549, 934
BmrFI CCNGG 1 cut(s) 1013
BmsI GCATC 3 cut(s) 89, 835, 988
BpiI GAAGAC 1 cut(s) 663
BpmI CTGGAG 1 cut(s) 1088
Bpu1102I GCTNAGC 1 cut(s) 327
BpuEI CTTGAG 1 cut(s) 237
BsaAI YACGTR 1 cut(s) 734
BsaBI GATNNNNATC 2 cut(s) 70, 574
BsaHI GRCGYC 1 cut(s) 993
BsaJI CCNNGG 2 cut(s) 282, 332
BsaWI WCCGGW 1 cut(s) 1057
Bsc4I CCNNNNNNNGG 1 cut(s) 722
Bse1I ACTGG 4 cut(s) 87, 487, 544, 751
Bse8I GATNNNNATC 2 cut(s) 70, 574
BseBI CCWGG 1 cut(s) 1013
BseDI CCNNGG 2 cut(s) 282, 332
BseGI GGATG 1 cut(s) 268
BseJI GATNNNNATC 2 cut(s) 70, 574
BseLI CCNNNNNNNGG 1 cut(s) 722
BseMII CTCAG 6 cut(s) 11, 164, 318, 621, 647, 713
BseNI ACTGG 4 cut(s) 87, 487, 544, 751
BseRI GAGGAG 1 cut(s) 51
BseSI GKGCMC 1 cut(s) 733
BseXI GCAGC 5 cut(s) 185, 232, 244, 418, 823
BshFI GGCC 2 cut(s) 499, 715
BsiHKAI GWGCWC 3 cut(s) 28, 197, 733
BsiSI CCGG 1 cut(s) 1058
BslFI GGGAC 1 cut(s) 702
BslI CCNNNNNNNGG 1 cut(s) 722
BsmAI GTCTC 2 cut(s) 95, 634
BsmFI GGGAC 1 cut(s) 702
BsnI GGCC 2 cut(s) 499, 715
Bsp1286I GDGCHC 3 cut(s) 28, 197, 733
Bsp1407I TGTACA 1 cut(s) 524
Bsp143I GATC 9 cut(s) 65, 479, 569, 640, 718, 741, 786, 865, 1039
Bsp1720I GCTNAGC 1 cut(s) 327
BspACI CCGC 3 cut(s) 509, 545, 980
BspANI GGCC 2 cut(s) 499, 715
BspCNI CTCAG 6 cut(s) 12, 163, 319, 620, 646, 712
BspLI GGNNCC 2 cut(s) 549, 934
BspPI GGATC 1 cut(s) 487
BspQI GCTCTTC 1 cut(s) 202
BsrGI TGTACA 1 cut(s) 524
BsrI ACTGG 4 cut(s) 87, 487, 544, 751
BssECI CCNNGG 2 cut(s) 282, 332
BssMI GATC 9 cut(s) 65, 479, 569, 640, 718, 741, 786, 865, 1039
BssNI GRCGYC 1 cut(s) 993
BssSI CACGAG 1 cut(s) 831
BssT1I CCWWGG 1 cut(s) 332
Bst2BI CACGAG 1 cut(s) 831
Bst2UI CCWGG 1 cut(s) 1013
Bst4CI ACNGT 5 cut(s) 13, 157, 166, 529, 628
Bst6I CTCTTC 3 cut(s) 202, 240, 758
BstACI GRCGYC 1 cut(s) 993
BstAUI TGTACA 1 cut(s) 524
BstBAI YACGTR 1 cut(s) 734
BstC8I GCNNGC 1 cut(s) 798
BstDEI CTNAG 9 cut(s) 20, 150, 327, 475, 607, 633, 699, 946, 966
BstF5I GGATG 1 cut(s) 268
BstH2I RGCGCY 1 cut(s) 828
BstHHI GCGC 1 cut(s) 827
BstKTI GATC 9 cut(s) 68, 482, 572, 643, 721, 744, 789, 868, 1042
BstMAI GTCTC 2 cut(s) 95, 634
BstMBI GATC 9 cut(s) 65, 479, 569, 640, 718, 741, 786, 865, 1039
BstMWI GCNNNNNNNGC 7 cut(s) 56, 254, 515, 824, 833, 845, 1072
BstNI CCWGG 1 cut(s) 1013
BstSCI CCNGG 1 cut(s) 1011
BstSLI GKGCMC 1 cut(s) 733
BstV1I GCAGC 5 cut(s) 185, 232, 244, 418, 823
BstV2I GAAGAC 1 cut(s) 663
BstX2I RGATCY 3 cut(s) 479, 569, 1039
BstYI RGATCY 3 cut(s) 479, 569, 1039
BsuI GTATCC 1 cut(s) 697
BsuRI GGCC 2 cut(s) 499, 715
BtsCI GGATG 1 cut(s) 268
BtsI GCAGTG 1 cut(s) 825
BtsIMutI CAGTG 3 cut(s) 162, 744, 825
Cac8I GCNNGC 1 cut(s) 798
CfoI GCGC 1 cut(s) 827
Cfr13I GGNCC 1 cut(s) 548
CseI GACGC 1 cut(s) 1001
Csp6I GTAC 5 cut(s) 138, 162, 287, 316, 525
CviAII CATG 2 cut(s) 128, 913
CviQI GTAC 5 cut(s) 138, 162, 287, 316, 525
DdeI CTNAG 9 cut(s) 20, 150, 327, 475, 607, 633, 699, 946, 966
DpnI GATC 9 cut(s) 67, 481, 571, 642, 720, 743, 788, 867, 1041
DpnII GATC 9 cut(s) 65, 479, 569, 640, 718, 741, 786, 865, 1039
DraI TTTAAA 1 cut(s) 781
DrdI GACNNNNNNGTC 1 cut(s) 665
DseDI GACNNNNNNGTC 1 cut(s) 665
Eam1104I CTCTTC 3 cut(s) 202, 240, 758
EarI CTCTTC 3 cut(s) 202, 240, 758
Ecl136II GAGCTC 2 cut(s) 26, 195
Eco130I CCWWGG 1 cut(s) 332
Eco147I AGGCCT 1 cut(s) 499
Eco24I GRGCYC 2 cut(s) 28, 197
Eco47I GGWCC 1 cut(s) 548
Eco53kI GAGCTC 2 cut(s) 26, 195
Eco57I CTGAAG 1 cut(s) 854
Eco72I CACGTG 1 cut(s) 734
EcoICRI GAGCTC 2 cut(s) 26, 195
EcoO109I RGGNCCY 1 cut(s) 548
EcoRII CCWGG 1 cut(s) 1011
EcoT14I CCWWGG 1 cut(s) 332
EcoT22I ATGCAT 1 cut(s) 104
EcoT38I GRGCYC 2 cut(s) 28, 197
ErhI CCWWGG 1 cut(s) 332
FaeI CATG 2 cut(s) 131, 916
FaqI GGGAC 1 cut(s) 702
FatI CATG 2 cut(s) 127, 912
FauI CCCGC 2 cut(s) 502, 538
FbaI TGATCA 1 cut(s) 741
Fnu4HI GCNGC 5 cut(s) 174, 246, 258, 432, 837
FokI GGATG 1 cut(s) 255
FriOI GRGCYC 2 cut(s) 28, 197
Fsp4HI GCNGC 5 cut(s) 174, 246, 258, 432, 837
FspBI CTAG 4 cut(s) 96, 119, 396, 678
GlaI GCGC 1 cut(s) 826
GluI GCNGC 5 cut(s) 174, 246, 258, 432, 837
GsuI CTGGAG 1 cut(s) 1088
HaeII RGCGCY 1 cut(s) 828
HaeIII GGCC 2 cut(s) 499, 715
HapII CCGG 1 cut(s) 1058
HgaI GACGC 1 cut(s) 1001
HhaI GCGC 1 cut(s) 827
Hin1I GRCGYC 1 cut(s) 993
Hin1II CATG 2 cut(s) 131, 916
Hin6I GCGC 1 cut(s) 825
HinP1I GCGC 1 cut(s) 825
HincII GTYRAC 2 cut(s) 349, 561
HindII GTYRAC 2 cut(s) 349, 561
HindIII AAGCTT 2 cut(s) 794, 1073
HinfI GANTC 6 cut(s) 115, 299, 611, 662, 962, 1029
HpaII CCGG 1 cut(s) 1058
HphI GGTGA 5 cut(s) 76, 200, 580, 982, 1063
Hpy166II GTNNAC 4 cut(s) 349, 525, 561, 731
Hpy188I TCNGA 8 cut(s) 30, 114, 153, 283, 304, 484, 610, 636
Hpy188III TCNNGA 6 cut(s) 96, 239, 678, 701, 930, 1079
Hpy8I GTNNAC 4 cut(s) 349, 525, 561, 731
Hpy99I CGWCG 1 cut(s) 50
HpyAV CCTTC 2 cut(s) 282, 747
HpyCH4III ACNGT 5 cut(s) 13, 157, 166, 529, 628
HpyCH4IV ACGT 2 cut(s) 691, 733
HpyCH4V TGCA 5 cut(s) 102, 173, 731, 800, 1001
HpyF10VI GCNNNNNNNGC 7 cut(s) 56, 254, 515, 824, 833, 845, 1072
HpyF3I CTNAG 9 cut(s) 20, 150, 327, 475, 607, 633, 699, 946, 966
HpySE526I ACGT 2 cut(s) 691, 733
Hsp92I GRCGYC 1 cut(s) 993
Hsp92II CATG 2 cut(s) 131, 916
HspAI GCGC 1 cut(s) 825
Ksp22I TGATCA 1 cut(s) 741
Kzo9I GATC 9 cut(s) 65, 479, 569, 640, 718, 741, 786, 865, 1039
LguI GCTCTTC 1 cut(s) 202
LmnI GCTCC 3 cut(s) 64, 815, 932
Lsp1109I GCAGC 5 cut(s) 185, 232, 244, 418, 823
LweI GCATC 3 cut(s) 89, 835, 988
MaeI CTAG 4 cut(s) 96, 119, 396, 678
MaeII ACGT 2 cut(s) 691, 733
MaeIII GTNAC 1 cut(s) 586
MalI GATC 9 cut(s) 67, 481, 571, 642, 720, 743, 788, 867, 1041
MboI GATC 9 cut(s) 65, 479, 569, 640, 718, 741, 786, 865, 1039
MboII GAAGA 7 cut(s) 46, 189, 222, 227, 668, 775, 860
MflI RGATCY 3 cut(s) 479, 569, 1039
MhlI GDGCHC 3 cut(s) 28, 197, 733
MluCI AATT 7 cut(s) 178, 201, 308, 341, 649, 775, 954
MlyI GAGTC 3 cut(s) 620, 656, 1023
MmeI TCCRAC 1 cut(s) 1015
MnlI CCTC 7 cut(s) 61, 72, 159, 271, 277, 403, 1042
Mph1103I ATGCAT 1 cut(s) 104
MroXI GAANNNNTTC 1 cut(s) 41
MseI TTAA 3 cut(s) 780, 957, 984
MslI CAYNNNNRTG 1 cut(s) 132
MspI CCGG 1 cut(s) 1058
MspR9I CCNGG 1 cut(s) 1013
MvaI CCWGG 1 cut(s) 1013
MwoI GCNNNNNNNGC 7 cut(s) 56, 254, 515, 824, 833, 845, 1072
NdeII GATC 9 cut(s) 65, 479, 569, 640, 718, 741, 786, 865, 1039
NlaIII CATG 2 cut(s) 131, 916
NlaIV GGNNCC 2 cut(s) 549, 934
NmuCI GTSAC 1 cut(s) 586
NsiI ATGCAT 1 cut(s) 104
PceI AGGCCT 1 cut(s) 499
PciSI GCTCTTC 1 cut(s) 202
PdmI GAANNNNTTC 1 cut(s) 41
PfeI GAWTC 3 cut(s) 115, 299, 962
PflFI GACNNNGTC 1 cut(s) 665
PkrI GCNGC 5 cut(s) 175, 247, 259, 433, 838
PleI GAGTC 3 cut(s) 619, 656, 1023
PmaCI CACGTG 1 cut(s) 734
PmlI CACGTG 1 cut(s) 734
PpsI GAGTC 3 cut(s) 619, 656, 1023
Ppu21I YACGTR 1 cut(s) 734
PpuMI RGGWCCY 1 cut(s) 548
Psp124BI GAGCTC 2 cut(s) 28, 197
Psp5II RGGWCCY 1 cut(s) 548
Psp6I CCWGG 1 cut(s) 1011
PspCI CACGTG 1 cut(s) 734
PspGI CCWGG 1 cut(s) 1011
PspN4I GGNNCC 2 cut(s) 549, 934
PspPI GGNCC 1 cut(s) 548
PspPPI RGGWCCY 1 cut(s) 548
PsuI RGATCY 3 cut(s) 479, 569, 1039
PsyI GACNNNGTC 1 cut(s) 665
RsaI GTAC 5 cut(s) 139, 163, 288, 317, 526
RsaNI GTAC 5 cut(s) 138, 162, 287, 316, 525
RseI CAYNNNNRTG 1 cut(s) 132
SacI GAGCTC 2 cut(s) 28, 197
SapI GCTCTTC 1 cut(s) 202
SaqAI TTAA 3 cut(s) 780, 957, 984
SatI GCNGC 5 cut(s) 174, 246, 258, 432, 837
Sau3AI GATC 9 cut(s) 65, 479, 569, 640, 718, 741, 786, 865, 1039
Sau96I GGNCC 1 cut(s) 548
ScaI AGTACT 1 cut(s) 317
SchI GAGTC 3 cut(s) 620, 656, 1023
ScrFI CCNGG 1 cut(s) 1013
SduI GDGCHC 3 cut(s) 28, 197, 733
SfaNI GCATC 3 cut(s) 89, 835, 988
SinI GGWCC 1 cut(s) 548
SmiMI CAYNNNNRTG 1 cut(s) 132
SmlI CTYRAG 1 cut(s) 252
SmoI CTYRAG 1 cut(s) 252
Sse9I AATT 7 cut(s) 178, 201, 308, 341, 649, 775, 954
SseBI AGGCCT 1 cut(s) 499
SsiI CCGC 3 cut(s) 509, 545, 980
SspMI CTAG 4 cut(s) 96, 119, 396, 678
SstI GAGCTC 2 cut(s) 28, 197
StuI AGGCCT 1 cut(s) 499
StyD4I CCNGG 1 cut(s) 1011
StyI CCWWGG 1 cut(s) 332
TaaI ACNGT 5 cut(s) 13, 157, 166, 529, 628
TaiI ACGT 2 cut(s) 694, 736
TaqI TCGA 3 cut(s) 64, 789, 1047
TasI AATT 7 cut(s) 178, 201, 308, 341, 649, 775, 954
TatI WGTACW 3 cut(s) 161, 315, 524
TfiI GAWTC 3 cut(s) 115, 299, 962
Tru1I TTAA 3 cut(s) 780, 957, 984
Tru9I TTAA 3 cut(s) 780, 957, 984
TscAI CASTG 3 cut(s) 162, 751, 825
TseFI GTSAC 1 cut(s) 586
TseI GCWGC 5 cut(s) 173, 245, 257, 431, 836
Tsp45I GTSAC 1 cut(s) 586
TspDTI ATGAA 2 cut(s) 171, 390
TspRI CASTG 3 cut(s) 162, 751, 825
Tth111I GACNNNGTC 1 cut(s) 665
VneI GTGCAC 1 cut(s) 729
VpaK11BI GGWCC 1 cut(s) 548
XapI RAATTY 3 cut(s) 308, 649, 775
XbaI TCTAGA 2 cut(s) 95, 677
XmnI GAANNNNTTC 1 cut(s) 41
XspI CTAG 4 cut(s) 96, 119, 396, 678
ZrmI AGTACT 1 cut(s) 317
Zsp2I ATGCAT 1 cut(s) 104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.