Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0014613

Physical Location & Seq

Genomic Coordinates Forward (+)

12827387 .. 12831444

Gene Structure 4058 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G205700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1083 bp

ATGGCAAGTGTAGCTGCAATAAGAGCCTTGAGGAAACGAATCAGTCCTTCCCTCACGTCACGAATTATCGCTTCCACCTCCAATTCTCGATCCATTAGCACACTGGTGTTAGCTGAACACCAAGGTGGTGCTATCAAGCCCCAATCAGTGAGCGCGGTAAAGGCTGCAAAATCTTTAAGCAACGACAATCCTATTTCATTGCTATTGGGCAGGCTCCGGCTCTGCCCTTCACGAAGCCGCAGCAAACGCCGCTCATGTGACCCTTCAGTTTCTGAGGTTCTTGTCGCTGATTCTGATGAATTTAGTCATCCTCTAGCAGAGCCTTGGGCTAAACTGATCCATTTGGTTCAGCAGAAAGGCGGGTACTCACATGTAATCACTGCTTCAGGTTCGTTTGGCAAGAACATACTGCCAAGGGCAGCTGCCCTTTTAGATGTTTCTCCGATCACGGATGTGATTGAAATTTCAGACCCTCATCTATTTGTCAGGCCAATATATGCTGGAAATGCACTTTGTACTGTTCGATACACTGGTGCTGGACCTTGTTTGTTGACAGTTAGATCAACATCCTTTCCAGTGTCCCCCATCTTAGCTGATTCAAAATCAAATGAAGCTCCTATCACCCAGGTTGATCTCTCCACCTTTGGTGAAGATTCTGTTGGTAAATCTCGATACGTAAAGCACACATCACAGGATACAGAACGCCCTGATCTTGGGAATGCTCGTGTTGTGGTTACTGGGGGCCGTGCATTGAAAAGTGCTGAAAACTTCAAAATGATAGAAAAACTTGCTGAGAAACTTGGTGCAGCTGTTGGAGCTACTCGTGCTGCTGTTGATGCAGGATATGTTCCCAATGACCTTCAGGTTGGCCAAACTGGAAAGATAGTTGCCCCAGAGTTGTACATGGCTTTTGGTGTTTCTGGAGCCATTCAACACTTAGCAGGCATGAGAGATTCCAAGGTCATTGTTGCTGTGAACAAAGATGCAGAGGCCCCCATATTCCAGGTTGCTGACTATGGACTTGTAGGCGATATTTTTGAAGTGATACCAGAGTTGCTAGAGAAGCTTCCTGAGAATAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005507 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006091 GO:0006629 GO:0006631 GO:0006635 GO:0008150 GO:0008152 GO:0009055 GO:0009056 GO:0009062 GO:0009987 GO:0016042 GO:0016054 GO:0016491 GO:0019395 GO:0019752 GO:0022900 GO:0030258 GO:0032787 GO:0033539 GO:0034440 GO:0036094 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0046872 GO:0046914 GO:0048037 GO:0050660 GO:0050662 GO:0055114 GO:0071704 GO:0072329 GO:0097159 GO:1901265 GO:1901363 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ETF ETF_alpha

Protein Analysis

361

Amino Acids

38.26

Weight (kDa)

9.07

Isoelectric Point (pI)

44.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014613)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50940
fragaria_vesca	FvH4_3g22000 FvH4_3g22000
malus_domestica	MD03G1209400.v1.1
prunus_persica	Prupe.4G205700_v2.0.a1
pyrus_communis	pycom03g15820
rosa_chinensis	RchiOBHm_Chr5g0037851
rosa_laevigata	RLG00000033817
rosa_multiflora	Rmu_sc0003735.1_g000010 Rmu_sc0005416.1_g000017
rosa_roxburghii	Rroxscaffold_1G00043070
rosa_rugosa	Rorug05G0168100
rosa_samantha	Rh5AG257000 Rh5BG259400 Rh5CG292400 Rh5DG269300
rosa_wichuraiana	Rw5G023830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	252
AccII	CGCG	1 cut(s)	155
AciI	CCGC	4 cut(s)	155, 238, 250, 360
AclWI	GGATC	2 cut(s)	84, 331
AcoI	YGGCCR	1 cut(s)	868
AcsI	RAATTY	2 cut(s)	299, 462
AcuI	CTGAAG	3 cut(s)	249, 369, 845
AfaI	GTAC	3 cut(s)	365, 517, 902
AfiI	CCNNNNNNNGG	1 cut(s)	713
AflIII	ACRYGT	1 cut(s)	370
AgsI	TTSAA	6 cut(s)	461, 600, 754, 772, 932, 1040
AjiI	CACGTC	1 cut(s)	57
AjnI	CCWGG	2 cut(s)	624, 1002
AjuI	GAANNNNNNNTTGG	2 cut(s)	642, 674
AleI	CACNNNNGTG	3 cut(s)	104, 123, 452
AluBI	AGCT	8 cut(s)	14, 113, 422, 593, 614, 809, 818, 1066
AluI	AGCT	8 cut(s)	14, 113, 422, 593, 614, 809, 818, 1066
AlwI	GGATC	2 cut(s)	84, 331
AlwNI	CAGNNNCTG	1 cut(s)	272
AoxI	GGCC	4 cut(s)	488, 742, 868, 990
ApeKI	GCWGC	7 cut(s)	14, 164, 240, 419, 422, 806, 827
ApoI	RAATTY	2 cut(s)	299, 462
AspLEI	GCGC	1 cut(s)	155
AspS9I	GGNCC	3 cut(s)	539, 742, 991
AsuHPI	GGTGA	2 cut(s)	613, 659
AvaII	GGWCC	1 cut(s)	539
BaeI	ACNNNNGTAYC	4 cut(s)	517, 550, 1037, 1070
BalI	TGGCCA	1 cut(s)	870
BauI	CACGAG	2 cut(s)	723, 822
BbvI	GCAGC	6 cut(s)	151, 252, 409, 431, 814, 818
BccI	CCATC	1 cut(s)	593
BceAI	ACGGC	1 cut(s)	729
BciT130I	CCWGG	2 cut(s)	626, 1004
BciVI	GTATCC	1 cut(s)	688
BfaI	CTAG	2 cut(s)	314, 1058
BfuI	GTATCC	1 cut(s)	688
BisI	GCNGC	9 cut(s)	15, 165, 238, 241, 250, 420, 423, 807, 828
BlsI	GCNGC	9 cut(s)	16, 166, 239, 242, 251, 421, 424, 808, 829
Bme1390I	CCNGG	2 cut(s)	626, 1004
Bme18I	GGWCC	1 cut(s)	539
BmgBI	CACGTC	1 cut(s)	57
BmgT120I	GGNCC	3 cut(s)	539, 742, 991
BmiI	GGNNCC	4 cut(s)	215, 743, 925, 993
BmrFI	CCNGG	2 cut(s)	626, 1004
BmrI	ACTGGG	1 cut(s)	747
BmsI	GCATC	2 cut(s)	826, 973
BmuI	ACTGGG	1 cut(s)	747
BpmI	CTGGAG	1 cut(s)	942
BpuEI	CTTGAG	1 cut(s)	49
BsaAI	YACGTR	1 cut(s)	676
BsaBI	GATNNNNATC	1 cut(s)	565
BsaJI	CCNNGG	5 cut(s)	121, 323, 413, 624, 957
Bsc4I	CCNNNNNNNGG	1 cut(s)	713
Bse1I	ACTGG	5 cut(s)	108, 535, 575, 742, 880
Bse3DI	GCAATG	1 cut(s)	197
Bse8I	GATNNNNATC	1 cut(s)	565
BseBI	CCWGG	2 cut(s)	626, 1004
BseDI	CCNNGG	5 cut(s)	121, 323, 413, 624, 957
BseGI	GGATG	3 cut(s)	307, 457, 566
BseJI	GATNNNNATC	1 cut(s)	565
BseLI	CCNNNNNNNGG	1 cut(s)	713
BseMI	GCAATG	1 cut(s)	197
BseMII	CTCAG	3 cut(s)	264, 783, 1062
BseNI	ACTGG	5 cut(s)	108, 535, 575, 742, 880
BseXI	GCAGC	6 cut(s)	151, 252, 409, 431, 814, 818
BsgI	GTGCAG	1 cut(s)	825
Bsh1236I	CGCG	1 cut(s)	155
BshFI	GGCC	4 cut(s)	490, 744, 870, 992
BsiSI	CCGG	1 cut(s)	217
BslFI	GGGAC	1 cut(s)	565
BslI	CCNNNNNNNGG	1 cut(s)	713
BsmFI	GGGAC	1 cut(s)	565
BsmI	GAATGC	1 cut(s)	724
BsnI	GGCC	4 cut(s)	490, 744, 870, 992
Bsp1407I	TGTACA	1 cut(s)	900
Bsp143I	GATC	6 cut(s)	89, 336, 444, 560, 631, 709
BspACI	CCGC	4 cut(s)	155, 238, 250, 360
BspANI	GGCC	4 cut(s)	490, 744, 870, 992
BspCNI	CTCAG	3 cut(s)	265, 784, 1063
BspFNI	CGCG	1 cut(s)	155
BspLI	GGNNCC	4 cut(s)	215, 743, 925, 993
BspPI	GGATC	2 cut(s)	84, 331
BsrBI	CCGCTC	1 cut(s)	252
BsrDI	GCAATG	1 cut(s)	197
BsrGI	TGTACA	1 cut(s)	900
BsrI	ACTGG	5 cut(s)	108, 535, 575, 742, 880
BssECI	CCNNGG	5 cut(s)	121, 323, 413, 624, 957
BssMI	GATC	6 cut(s)	89, 336, 444, 560, 631, 709
BssSI	CACGAG	2 cut(s)	723, 822
BssT1I	CCWWGG	4 cut(s)	121, 323, 413, 957
Bst2BI	CACGAG	2 cut(s)	723, 822
Bst2UI	CCWGG	2 cut(s)	626, 1004
Bst4CI	ACNGT	2 cut(s)	520, 556
BstAUI	TGTACA	1 cut(s)	900
BstBAI	YACGTR	1 cut(s)	676
BstC8I	GCNNGC	2 cut(s)	212, 943
BstDEI	CTNAG	5 cut(s)	273, 589, 792, 937, 1071
BstF5I	GGATG	3 cut(s)	307, 457, 566
BstFNI	CGCG	1 cut(s)	155
BstHHI	GCGC	1 cut(s)	155
BstKTI	GATC	6 cut(s)	92, 339, 447, 563, 634, 712
BstMBI	GATC	6 cut(s)	89, 336, 444, 560, 631, 709
BstNI	CCWGG	2 cut(s)	626, 1004
BstNSI	RCATGY	1 cut(s)	374
BstSCI	CCNGG	2 cut(s)	624, 1002
BstSNI	TACGTA	1 cut(s)	676
BstUI	CGCG	1 cut(s)	155
BstV1I	GCAGC	6 cut(s)	151, 252, 409, 431, 814, 818
BsuI	GTATCC	1 cut(s)	688
BsuRI	GGCC	4 cut(s)	490, 744, 870, 992
BtrI	CACGTC	1 cut(s)	57
BtsCI	GGATG	3 cut(s)	307, 457, 566
BtsI	GCAGTG	1 cut(s)	378
BtsIMutI	CAGTG	5 cut(s)	101, 153, 378, 528, 582
Cac8I	GCNNGC	2 cut(s)	212, 943
CaiI	CAGNNNCTG	1 cut(s)	272
CfoI	GCGC	1 cut(s)	155
Cfr13I	GGNCC	3 cut(s)	539, 742, 991
Csp6I	GTAC	3 cut(s)	364, 516, 901
CviAII	CATG	4 cut(s)	255, 371, 904, 946
CviQI	GTAC	3 cut(s)	364, 516, 901
DdeI	CTNAG	5 cut(s)	273, 589, 792, 937, 1071
DpnI	GATC	6 cut(s)	91, 338, 446, 562, 633, 711
DpnII	GATC	6 cut(s)	89, 336, 444, 560, 631, 709
EaeI	YGGCCR	1 cut(s)	868
Eco105I	TACGTA	1 cut(s)	676
Eco130I	CCWWGG	4 cut(s)	121, 323, 413, 957
Eco47I	GGWCC	1 cut(s)	539
Eco57I	CTGAAG	3 cut(s)	249, 369, 845
EcoO109I	RGGNCCY	1 cut(s)	991
EcoRII	CCWGG	2 cut(s)	624, 1002
EcoT14I	CCWWGG	4 cut(s)	121, 323, 413, 957
ErhI	CCWWGG	4 cut(s)	121, 323, 413, 957
FaeI	CATG	4 cut(s)	258, 374, 907, 949
FaqI	GGGAC	1 cut(s)	565
FatI	CATG	4 cut(s)	254, 370, 903, 945
FauI	CCCGC	1 cut(s)	353
Fnu4HI	GCNGC	9 cut(s)	15, 165, 238, 241, 250, 420, 423, 807, 828
FokI	GGATG	3 cut(s)	294, 464, 553
Fsp4HI	GCNGC	9 cut(s)	15, 165, 238, 241, 250, 420, 423, 807, 828
FspBI	CTAG	2 cut(s)	314, 1058
GlaI	GCGC	1 cut(s)	154
GluI	GCNGC	9 cut(s)	15, 165, 238, 241, 250, 420, 423, 807, 828
GsuI	CTGGAG	1 cut(s)	942
HaeIII	GGCC	4 cut(s)	490, 744, 870, 992
HapII	CCGG	1 cut(s)	217
HhaI	GCGC	1 cut(s)	155
Hin1II	CATG	4 cut(s)	258, 374, 907, 949
Hin6I	GCGC	1 cut(s)	153
HinP1I	GCGC	1 cut(s)	153
HincII	GTYRAC	1 cut(s)	552
HindII	GTYRAC	1 cut(s)	552
HindIII	AAGCTT	1 cut(s)	1064
HinfI	GANTC	5 cut(s)	39, 290, 596, 653, 953
HpaII	CCGG	1 cut(s)	217
HphI	GGTGA	2 cut(s)	613, 659
Hpy166II	GTNNAC	2 cut(s)	552, 976
Hpy188I	TCNGA	4 cut(s)	274, 295, 444, 469
Hpy188III	TCNNGA	6 cut(s)	60, 87, 231, 669, 921, 1070
Hpy8I	GTNNAC	2 cut(s)	552, 976
HpyAV	CCTTC	4 cut(s)	57, 237, 273, 869
HpyCH4III	ACNGT	2 cut(s)	520, 556
HpyCH4IV	ACGT	2 cut(s)	56, 675
HpyCH4V	TGCA	7 cut(s)	17, 167, 509, 749, 806, 839, 986
HpyF3I	CTNAG	5 cut(s)	273, 589, 792, 937, 1071
HpySE526I	ACGT	2 cut(s)	56, 675
Hsp92II	CATG	4 cut(s)	258, 374, 907, 949
HspAI	GCGC	1 cut(s)	153
Kzo9I	GATC	6 cut(s)	89, 336, 444, 560, 631, 709
LmnI	GCTCC	4 cut(s)	219, 619, 815, 923
Lsp1109I	GCAGC	6 cut(s)	151, 252, 409, 431, 814, 818
LweI	GCATC	2 cut(s)	826, 973
MaeI	CTAG	2 cut(s)	314, 1058
MaeII	ACGT	2 cut(s)	56, 675
MaeIII	GTNAC	3 cut(s)	57, 257, 733
MalI	GATC	6 cut(s)	91, 338, 446, 562, 633, 711
MbiI	CCGCTC	1 cut(s)	252
MboI	GATC	6 cut(s)	89, 336, 444, 560, 631, 709
MboII	GAAGA	1 cut(s)	662
MlsI	TGGCCA	1 cut(s)	870
MluCI	AATT	4 cut(s)	63, 82, 299, 462
MluNI	TGGCCA	1 cut(s)	870
MmeI	TCCRAC	1 cut(s)	793
MnlI	CCTC	7 cut(s)	24, 62, 88, 268, 321, 483, 982
Mox20I	TGGCCA	1 cut(s)	870
MscI	TGGCCA	1 cut(s)	870
MseI	TTAA	1 cut(s)	176
MslI	CAYNNNNRTG	3 cut(s)	104, 123, 452
Msp20I	TGGCCA	1 cut(s)	870
MspA1I	CMGCKG	2 cut(s)	422, 809
MspI	CCGG	1 cut(s)	217
MspR9I	CCNGG	2 cut(s)	626, 1004
Mva1269I	GAATGC	1 cut(s)	724
MvaI	CCWGG	2 cut(s)	626, 1004
MvnI	CGCG	1 cut(s)	155
NdeII	GATC	6 cut(s)	89, 336, 444, 560, 631, 709
NlaIII	CATG	4 cut(s)	258, 374, 907, 949
NlaIV	GGNNCC	4 cut(s)	215, 743, 925, 993
NmuCI	GTSAC	2 cut(s)	57, 257
NspI	RCATGY	1 cut(s)	374
OliI	CACNNNNGTG	3 cut(s)	104, 123, 452
PciI	ACATGT	1 cut(s)	370
PctI	GAATGC	1 cut(s)	724
PfeI	GAWTC	5 cut(s)	39, 290, 596, 653, 953
PkrI	GCNGC	9 cut(s)	16, 166, 239, 242, 251, 421, 424, 808, 829
Ppu21I	YACGTR	1 cut(s)	676
PscI	ACATGT	1 cut(s)	370
Psp6I	CCWGG	2 cut(s)	624, 1002
PspGI	CCWGG	2 cut(s)	624, 1002
PspN4I	GGNNCC	4 cut(s)	215, 743, 925, 993
PspPI	GGNCC	3 cut(s)	539, 742, 991
PstNI	CAGNNNCTG	1 cut(s)	272
PvuII	CAGCTG	2 cut(s)	422, 809
RsaI	GTAC	3 cut(s)	365, 517, 902
RsaNI	GTAC	3 cut(s)	364, 516, 901
RseI	CAYNNNNRTG	3 cut(s)	104, 123, 452
SaqAI	TTAA	1 cut(s)	176
SatI	GCNGC	9 cut(s)	15, 165, 238, 241, 250, 420, 423, 807, 828
Sau3AI	GATC	6 cut(s)	89, 336, 444, 560, 631, 709
Sau96I	GGNCC	3 cut(s)	539, 742, 991
ScrFI	CCNGG	2 cut(s)	626, 1004
SfaNI	GCATC	2 cut(s)	826, 973
SinI	GGWCC	1 cut(s)	539
SmiMI	CAYNNNNRTG	3 cut(s)	104, 123, 452
SmlI	CTYRAG	1 cut(s)	28
SmoI	CTYRAG	1 cut(s)	28
SnaBI	TACGTA	1 cut(s)	676
Sse9I	AATT	4 cut(s)	63, 82, 299, 462
SsiI	CCGC	4 cut(s)	155, 238, 250, 360
SspMI	CTAG	2 cut(s)	314, 1058
StyD4I	CCNGG	2 cut(s)	624, 1002
StyI	CCWWGG	4 cut(s)	121, 323, 413, 957
TaaI	ACNGT	2 cut(s)	520, 556
TaiI	ACGT	2 cut(s)	59, 678
TaqI	TCGA	3 cut(s)	88, 523, 670
TasI	AATT	4 cut(s)	63, 82, 299, 462
TatI	WGTACW	2 cut(s)	515, 900
TauI	GCSGC	2 cut(s)	240, 252
TfiI	GAWTC	5 cut(s)	39, 290, 596, 653, 953
Tru1I	TTAA	1 cut(s)	176
Tru9I	TTAA	1 cut(s)	176
TscAI	CASTG	5 cut(s)	108, 153, 385, 535, 582
TseFI	GTSAC	2 cut(s)	57, 257
TseI	GCWGC	7 cut(s)	14, 164, 240, 419, 422, 806, 827
Tsp45I	GTSAC	2 cut(s)	57, 257
TspDTI	ATGAA	3 cut(s)	186, 312, 624
TspGWI	ACGGA	1 cut(s)	464
TspRI	CASTG	5 cut(s)	108, 153, 385, 535, 582
VpaK11BI	GGWCC	1 cut(s)	539
XapI	RAATTY	2 cut(s)	299, 462
XceI	RCATGY	1 cut(s)	374
XcmI	CCANNNNNNNNNTGG	1 cut(s)	100
XspI	CTAG	2 cut(s)	314, 1058

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.