Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003669

Physical Location & Seq

Genomic Coordinates Reverse (-)

20840091 .. 20845899

Gene Structure 5809 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G55750.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGGCTGGTGGGCAAATAGAGAAGCTAGTCAAATACAAGAGCACTGTCAAGGATCCAGGAACTCCTGGATTTCTCAGAATTAGAGAAGGGATGTTGCTCTTCGTCCCTAATGATCCCAAATCAGATTCTAAGCTCAAAGTACTTACTCAGAACATCAAAAGTCAAAAATATACCAAAGAAGGATCAAATAAACCTCCTTGGCTCAATCTCACCAACAAGCAGGCAAAGAGTCATATCTTTGAGTTTGAAAATTATCCCGACATGCATGCTTGCCGTGATTTCATCACTAAGGCCCTTGCTAAATGTGAATTGGAGCCTAATAAATCCGTTGTCTCGACATCTTCCGAGCAACTCAGTATTAAGGAATTGGAGCTGCGCTTCAAGCTTCTGAGAGAAAATAGTGAGCTGCAGAGATTGCATAAGCAATTTGTGGAAAGTAAAGTACTGACTGAAGATGAATTCTGGGCTACAAGAAAGAAATTACTTGGTAAAGATTCCATCAGAAAGTCAAAACAGCAGCTCGGGCTTAAGAGCATGATGGTTTCTGGCATCAAACCATCTACTGATGGGCGGACTAATAGAGTGACGTTTAACTTGACACCTGAGATAATTTTTCAGATTTTTGCTGAGAAGCCAGCTGTTCGGCAGGCATTCATCAATTATGTTCCGAGTAAGATGACAGAAAAAGACTTCTGGACAAAATATTTTAGAGCAGAATATCTTTACAGCACCAAAAATACAGCAGTAGCTGCAGCAGAAGCTGCTGAGGACGAGGAACTCGCTGTCTTTCTGAAGCCTGATGAGATATTGGCTCGGGAAACTCGTCACAAGATTAGACGGGTTGATCCAACTCTTGACATGGAGGCTGACCAGGGAGACGACTACACTCATCTTATGGACCACGGGATCCAGCGTGATGGCACCATGGATGTTGTTGAACCACAAAATGATCAGTTTAAACGATCACTTTTGCAAGATCTTAATCGTCATGCTGCTGTTGTATTGGAAGGCAGAAGCATTGATGTTGAGTCAGAAGATACAAGGATTGTTGCAGAGGCTCTCACACGGGTTAAACAAGTAAGCAAAGCTGATGGTGAAACCACCAAGGACGCTAATCAGGAGAGATTGGAAAGAATGTCCCGGGTAGCAGGAATGGAGGATCTTCAAGCACCACAAAATTTCCCATTGGCGCCGCTTTCTATCAAGGATCCTCGTGATTACTTTGAATCTCAACAAGGAAACGTCCTCAATGTACCCAGAGGAGCAAAGGGCTTGAAGAGAAATGTCCATGAAGCTTATGGATTACTAAAGGAATCCATTTTAGAGATTAGAGCTACAGGATTAAGTGATCCGTTGATTAAGCCTGAAGTTTCTTTCGAGGTTTTCAGTTCGTTAACCCGAACCATTGCAACTGCTAAAAATATTAATGGGAAGAACCCACGAGAGAGCTTTCTGGACAGATTACCAAAGTCCACTAAGGATGAAGTTCTACACCATTGGACATCAATACAAGAATTACTGAAACATTTTTGGTCATCTTATCCGATAACAACCACATATCTTCATACCAAGGTTGGTAAACTGAAGGATGCAATGTCCAATACATATTCAAAACTTGAGGCAATGAAAGAGTCGGTGCAATCTGATCTCCGGCATCAGGTTTCTCTACTGGTTCGTCCAATGCAACAGGCTCTTGACGCTGCGTTCCATCACTACGAAGTGGATCTGCAGAGAAGAACAGCTAAGAGCGGCGAAAGACCAAACGGCTACGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0000439 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005675 GO:0006139 GO:0006259 GO:0006281 GO:0006351 GO:0006355 GO:0006357 GO:0006360 GO:0006366 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016310 GO:0016591 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032774 GO:0032806 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070816 GO:0071704 GO:0080090 GO:0090304 GO:0090575 GO:0097659 GO:1901360 GO:1901362 GO:1901564 GO:1901576 GO:1902494 GO:1902554 GO:1902911 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03022 ko03420 ko05203 map03022 map03420 map05203

Pfam Domains

Protein Families

BSD PH_TFIIH

Protein Analysis

591

Amino Acids

67.51

Weight (kDa)

8.98

Isoelectric Point (pI)

36.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH_TFIIH	PF08567	21 - 99	3.1e-07	TFIIH p62 subunit, N-terminal domain
BSD	PF03909	196 - 245	2.5e-12	BSD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003669)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55750 AT1G55750 AT1G55750 AT1G55750 AT1G55750 AT1G55750 AT3G61420 AT3G61420
fragaria_vesca	FvH4_5g28910 FvH4_5g28910 FvH4_5g28910 FvH4_5g28910 FvH4_5g28910 FvH4_5g28910 FvH4_5g28910 FvH4_6g25000
malus_domestica	MD08G1246300.v1.1 MD15G1441400.v1.1
prunus_persica	Prupe.1G583500_v2.0.a1 Prupe.1G583500_v2.0.a1 Prupe.1G583500_v2.0.a1 Prupe.1G583500_v2.0.a1
pyrus_communis	pycom08g21370 pycom15g38940
rosa_chinensis	RchiOBHm_Chr7g0221221
rosa_laevigata	RLG00000002169
rosa_multiflora	Rmu_sc0000324.1_g000015
rosa_roxburghii	Rroxscaffold_3G00238550
rosa_rugosa	Rorug07G0201400 Rorug07G0201500
rosa_samantha	Rh7AG340400 Rh7BG331500 Rh7CG358300 Rh7DG339100
rosa_wichuraiana	Rw7G028970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	920, 1189
AccBSI	CCGCTC	1 cut(s)	1749
AciI	CCGC	3 cut(s)	571, 1193, 1749
AcsI	RAATTY	2 cut(s)	458, 1177
AcuI	CTGAAG	4 cut(s)	471, 812, 1386, 1604
AcyI	GRCGYC	1 cut(s)	1190
AfaI	GTAC	3 cut(s)	141, 444, 1254
AfiI	CCNNNNNNNGG	1 cut(s)	1657
AflII	CTTAAG	1 cut(s)	527
AgsI	TTSAA	7 cut(s)	248, 382, 938, 1166, 1226, 1276, 1611
AjnI	CCWGG	3 cut(s)	55, 64, 870
Alw21I	GWGCWC	1 cut(s)	44
Alw26I	GTCTC	2 cut(s)	337, 870
AlwNI	CAGNNNCTG	2 cut(s)	749, 761
Ama87I	CYCGRG	3 cut(s)	521, 813, 1140
AoxI	GGCC	1 cut(s)	291
ApeKI	GCWGC	8 cut(s)	373, 406, 517, 749, 752, 761, 992, 1700
ApoI	RAATTY	2 cut(s)	458, 1177
AseI	ATTAAT	1 cut(s)	1425
AspLEI	GCGC	2 cut(s)	378, 1192
AspS9I	GGNCC	2 cut(s)	292, 898
AsuC2I	CCSGG	2 cut(s)	1141, 1142
AsuHPI	GGTGA	2 cut(s)	202, 1106
AvaI	CYCGRG	3 cut(s)	521, 813, 1140
AvaII	GGWCC	1 cut(s)	898
BamHI	GGATCC	3 cut(s)	52, 906, 1207
BanI	GGYRCC	2 cut(s)	920, 1189
BauI	CACGAG	2 cut(s)	1212, 1440
Bbv12I	GWGCWC	1 cut(s)	44
BbvCI	CCTCAGC	1 cut(s)	765
BbvI	GCAGC	8 cut(s)	360, 393, 529, 736, 748, 764, 979, 1687
BccI	CCATC	7 cut(s)	506, 532, 560, 565, 911, 1085, 1716
BceAI	ACGGC	1 cut(s)	258
BcgI	CGANNNNNNTGC	2 cut(s)	248, 282
BciT130I	CCWGG	3 cut(s)	57, 66, 872
BclI	TGATCA	1 cut(s)	949
BcnI	CCSGG	2 cut(s)	1141, 1142
BcoDI	GTCTC	2 cut(s)	337, 870
BfaI	CTAG	1 cut(s)	26
BfmI	CTRYAG	4 cut(s)	407, 750, 1335, 1727
BfoI	RGCGCY	1 cut(s)	1193
BfrI	CTTAAG	1 cut(s)	527
BglII	AGATCT	1 cut(s)	976
BmcAI	AGTACT	2 cut(s)	141, 444
Bme1390I	CCNGG	5 cut(s)	57, 66, 872, 1141, 1142
Bme18I	GGWCC	1 cut(s)	898
BmeT110I	CYCGRG	3 cut(s)	521, 813, 1140
BmgT120I	GGNCC	2 cut(s)	292, 898
BmiI	GGNNCC	6 cut(s)	54, 315, 908, 922, 1191, 1209
BmrFI	CCNGG	5 cut(s)	57, 66, 872, 1141, 1142
BmsI	GCATC	3 cut(s)	558, 1579, 1663
Bpu10I	CCTNAGC	1 cut(s)	765
BpuEI	CTTGAG	1 cut(s)	1637
BpuMI	CCSGG	2 cut(s)	1141, 1142
BsaAI	YACGTR	1 cut(s)	1771
BsaBI	GATNNNNATC	1 cut(s)	981
BsaHI	GRCGYC	1 cut(s)	1190
BsaJI	CCNNGG	7 cut(s)	197, 871, 901, 924, 1104, 1140, 1569
Bsc4I	CCNNNNNNNGG	1 cut(s)	1657
Bse1I	ACTGG	1 cut(s)	1674
Bse3DI	GCAATG	3 cut(s)	1404, 1599, 1629
Bse8I	GATNNNNATC	1 cut(s)	981
BseBI	CCWGG	3 cut(s)	57, 66, 872
BseDI	CCNNGG	7 cut(s)	197, 871, 901, 924, 1104, 1140, 1569
BseGI	GGATG	4 cut(s)	96, 934, 1486, 1594
BseJI	GATNNNNATC	1 cut(s)	981
BseLI	CCNNNNNNNGG	1 cut(s)	1657
BseMI	GCAATG	3 cut(s)	1404, 1599, 1629
BseMII	CTCAG	7 cut(s)	88, 161, 367, 380, 594, 618, 756
BseNI	ACTGG	1 cut(s)	1674
BseRI	GAGGAG	1 cut(s)	1275
BseXI	GCAGC	8 cut(s)	360, 393, 529, 736, 748, 764, 979, 1687
BshFI	GGCC	1 cut(s)	293
BshNI	GGYRCC	2 cut(s)	920, 1189
BsiHKAI	GWGCWC	1 cut(s)	44
BsiHKCI	CYCGRG	3 cut(s)	521, 813, 1140
BsiSI	CCGG	2 cut(s)	1141, 1651
BslFI	GGGAC	2 cut(s)	89, 1123
BslI	CCNNNNNNNGG	1 cut(s)	1657
BsmAI	GTCTC	2 cut(s)	337, 870
BsmBI	CGTCTC	1 cut(s)	870
BsmFI	GGGAC	2 cut(s)	89, 1123
BsmI	GAATGC	1 cut(s)	650
BsnI	GGCC	1 cut(s)	293
BsoBI	CYCGRG	3 cut(s)	521, 813, 1140
Bsp1286I	GDGCHC	1 cut(s)	44
Bsp19I	CCATGG	1 cut(s)	924
BspACI	CCGC	3 cut(s)	571, 1193, 1749
BspANI	GGCC	1 cut(s)	293
BspCNI	CTCAG	7 cut(s)	87, 160, 366, 381, 595, 619, 757
BspLI	GGNNCC	6 cut(s)	54, 315, 908, 922, 1191, 1209
BspMAI	CTGCAG	3 cut(s)	411, 754, 1731
BspQI	GCTCTTC	1 cut(s)	104
BspT107I	GGYRCC	2 cut(s)	920, 1189
BspTI	CTTAAG	1 cut(s)	527
BsrBI	CCGCTC	1 cut(s)	1749
BsrDI	GCAATG	3 cut(s)	1404, 1599, 1629
BsrI	ACTGG	1 cut(s)	1674
BssECI	CCNNGG	7 cut(s)	197, 871, 901, 924, 1104, 1140, 1569
BssNI	GRCGYC	1 cut(s)	1190
BssSI	CACGAG	2 cut(s)	1212, 1440
BssT1I	CCWWGG	4 cut(s)	197, 924, 1104, 1569
Bst2BI	CACGAG	2 cut(s)	1212, 1440
Bst2UI	CCWGG	3 cut(s)	57, 66, 872
Bst4CI	ACNGT	1 cut(s)	46
Bst6I	CTCTTC	2 cut(s)	104, 1271
BstACI	GRCGYC	1 cut(s)	1190
BstAFI	CTTAAG	1 cut(s)	527
BstAPI	GCANNNNNTGC	3 cut(s)	415, 749, 761
BstBAI	YACGTR	1 cut(s)	1771
BstC8I	GCNNGC	5 cut(s)	222, 267, 271, 636, 648
BstDSI	CCRYGG	2 cut(s)	901, 924
BstF5I	GGATG	4 cut(s)	96, 934, 1486, 1594
BstH2I	RGCGCY	1 cut(s)	1193
BstHHI	GCGC	2 cut(s)	378, 1192
BstMAI	GTCTC	2 cut(s)	337, 870
BstMWI	GCNNNNNNNGC	7 cut(s)	382, 415, 523, 749, 758, 761, 1697
BstNI	CCWGG	3 cut(s)	57, 66, 872
BstNSI	RCATGY	2 cut(s)	265, 269
BstSCI	CCNGG	5 cut(s)	55, 64, 870, 1139, 1140
BstSFI	CTRYAG	4 cut(s)	407, 750, 1335, 1727
BstSNI	TACGTA	1 cut(s)	1771
BstV1I	GCAGC	8 cut(s)	360, 393, 529, 736, 748, 764, 979, 1687
BstX2I	RGATCY	6 cut(s)	52, 906, 976, 1159, 1207, 1723
BstXI	CCANNNNNNTGG	1 cut(s)	917
BstYI	RGATCY	6 cut(s)	52, 906, 976, 1159, 1207, 1723
BsuRI	GGCC	1 cut(s)	293
BtgI	CCRYGG	2 cut(s)	901, 924
BtsCI	GGATG	4 cut(s)	96, 934, 1486, 1594
BtsIMutI	CAGTG	1 cut(s)	42
Cac8I	GCNNGC	5 cut(s)	222, 267, 271, 636, 648
CaiI	CAGNNNCTG	2 cut(s)	749, 761
CfoI	GCGC	2 cut(s)	378, 1192
Cfr13I	GGNCC	2 cut(s)	292, 898
Cfr9I	CCCGGG	1 cut(s)	1140
CseI	GACGC	2 cut(s)	1118, 1706
Csp6I	GTAC	3 cut(s)	140, 443, 1253
CviAII	CATG	7 cut(s)	262, 266, 535, 859, 925, 989, 1289
CviQI	GTAC	3 cut(s)	140, 443, 1253
DinI	GGCGCC	1 cut(s)	1191
DraI	TTTAAA	1 cut(s)	958
Eam1104I	CTCTTC	2 cut(s)	104, 1271
EarI	CTCTTC	2 cut(s)	104, 1271
EciI	GGCGGA	1 cut(s)	586
Eco105I	TACGTA	1 cut(s)	1771
Eco130I	CCWWGG	4 cut(s)	197, 924, 1104, 1569
Eco47I	GGWCC	1 cut(s)	898
Eco57I	CTGAAG	4 cut(s)	471, 812, 1386, 1604
Eco88I	CYCGRG	3 cut(s)	521, 813, 1140
EcoO109I	RGGNCCY	1 cut(s)	292
EcoRI	GAATTC	1 cut(s)	458
EcoRII	CCWGG	3 cut(s)	55, 64, 870
EcoT14I	CCWWGG	4 cut(s)	197, 924, 1104, 1569
EcoT22I	ATGCAT	1 cut(s)	267
EgeI	GGCGCC	1 cut(s)	1191
EheI	GGCGCC	1 cut(s)	1191
ErhI	CCWWGG	4 cut(s)	197, 924, 1104, 1569
Esp3I	CGTCTC	1 cut(s)	870
FaeI	CATG	7 cut(s)	265, 269, 538, 862, 928, 992, 1292
FaqI	GGGAC	2 cut(s)	89, 1123
FatI	CATG	7 cut(s)	261, 265, 534, 858, 924, 988, 1288
FbaI	TGATCA	1 cut(s)	949
FokI	GGATG	4 cut(s)	103, 941, 1493, 1601
FspBI	CTAG	1 cut(s)	26
GlaI	GCGC	2 cut(s)	377, 1191
HaeII	RGCGCY	1 cut(s)	1193
HaeIII	GGCC	1 cut(s)	293
HapII	CCGG	2 cut(s)	1141, 1651
HgaI	GACGC	2 cut(s)	1118, 1706
HhaI	GCGC	2 cut(s)	378, 1192
Hin1I	GRCGYC	1 cut(s)	1190
Hin1II	CATG	7 cut(s)	265, 269, 538, 862, 928, 992, 1292
Hin6I	GCGC	2 cut(s)	376, 1190
HinP1I	GCGC	2 cut(s)	376, 1190
HincII	GTYRAC	1 cut(s)	1395
HindII	GTYRAC	1 cut(s)	1395
HindIII	AAGCTT	2 cut(s)	383, 1293
HinfI	GANTC	7 cut(s)	125, 229, 494, 1028, 1226, 1313, 1631
HpaI	GTTAAC	1 cut(s)	1395
HpaII	CCGG	2 cut(s)	1141, 1651
HphI	GGTGA	2 cut(s)	202, 1106
Hpy166II	GTNNAC	3 cut(s)	1395, 1473, 1580
Hpy188III	TCNNGA	9 cut(s)	257, 334, 694, 815, 854, 1118, 1214, 1454, 1694
Hpy8I	GTNNAC	3 cut(s)	1395, 1473, 1580
HpyAV	CCTTC	4 cut(s)	80, 173, 1001, 1579
HpyCH4III	ACNGT	1 cut(s)	46
HpyCH4IV	ACGT	3 cut(s)	587, 1242, 1770
HpyF10VI	GCNNNNNNNGC	7 cut(s)	382, 415, 523, 749, 758, 761, 1697
HpySE526I	ACGT	3 cut(s)	587, 1242, 1770
Hsp92I	GRCGYC	1 cut(s)	1190
Hsp92II	CATG	7 cut(s)	265, 269, 538, 862, 928, 992, 1292
HspAI	GCGC	2 cut(s)	376, 1190
KasI	GGCGCC	1 cut(s)	1189
Ksp22I	TGATCA	1 cut(s)	949
KspAI	GTTAAC	1 cut(s)	1395
LguI	GCTCTTC	1 cut(s)	104
LmnI	GCTCC	3 cut(s)	313, 370, 1262
Lsp1109I	GCAGC	8 cut(s)	360, 393, 529, 736, 748, 764, 979, 1687
LweI	GCATC	3 cut(s)	558, 1579, 1663
MaeI	CTAG	1 cut(s)	26
MaeII	ACGT	3 cut(s)	587, 1242, 1770
MaeIII	GTNAC	2 cut(s)	583, 824
MbiI	CCGCTC	1 cut(s)	1749
MboII	GAAGA	9 cut(s)	91, 333, 464, 1046, 1154, 1288, 1444, 1553, 1746
MflI	RGATCY	6 cut(s)	52, 906, 976, 1159, 1207, 1723
MhlI	GDGCHC	1 cut(s)	44
Mly113I	GGCGCC	1 cut(s)	1190
MlyI	GAGTC	3 cut(s)	238, 1037, 1640
MmeI	TCCRAC	1 cut(s)	872
Mph1103I	ATGCAT	1 cut(s)	267
MspA1I	CMGCKG	1 cut(s)	638
MspCI	CTTAAG	1 cut(s)	527
MspI	CCGG	2 cut(s)	1141, 1651
MspR9I	CCNGG	5 cut(s)	57, 66, 872, 1141, 1142
MssI	GTTTAAAC	1 cut(s)	958
Mva1269I	GAATGC	1 cut(s)	650
MvaI	CCWGG	3 cut(s)	57, 66, 872
MwoI	GCNNNNNNNGC	7 cut(s)	382, 415, 523, 749, 758, 761, 1697
NarI	GGCGCC	1 cut(s)	1190
NciI	CCSGG	2 cut(s)	1141, 1142
NcoI	CCATGG	1 cut(s)	924
NlaIII	CATG	7 cut(s)	265, 269, 538, 862, 928, 992, 1292
NlaIV	GGNNCC	6 cut(s)	54, 315, 908, 922, 1191, 1209
NmuCI	GTSAC	2 cut(s)	583, 824
NsiI	ATGCAT	1 cut(s)	267
NspI	RCATGY	2 cut(s)	265, 269
PaeI	GCATGC	1 cut(s)	269
PciSI	GCTCTTC	1 cut(s)	104
PcsI	WCGNNNNNNNCGW	1 cut(s)	820
PctI	GAATGC	1 cut(s)	650
PfeI	GAWTC	4 cut(s)	125, 494, 1226, 1313
PfoI	TCCNGGA	2 cut(s)	55, 64
PleI	GAGTC	3 cut(s)	237, 1036, 1639
PluTI	GGCGCC	1 cut(s)	1193
PmeI	GTTTAAAC	1 cut(s)	958
PpsI	GAGTC	3 cut(s)	237, 1036, 1639
Ppu21I	YACGTR	1 cut(s)	1771
PshBI	ATTAAT	1 cut(s)	1425
Psp6I	CCWGG	3 cut(s)	55, 64, 870
PspGI	CCWGG	3 cut(s)	55, 64, 870
PspN4I	GGNNCC	6 cut(s)	54, 315, 908, 922, 1191, 1209
PspPI	GGNCC	2 cut(s)	292, 898
PstI	CTGCAG	3 cut(s)	411, 754, 1731
PstNI	CAGNNNCTG	2 cut(s)	749, 761
PsuI	RGATCY	6 cut(s)	52, 906, 976, 1159, 1207, 1723
PvuII	CAGCTG	1 cut(s)	638
RsaI	GTAC	3 cut(s)	141, 444, 1254
RsaNI	GTAC	3 cut(s)	140, 443, 1253
SapI	GCTCTTC	1 cut(s)	104
Sau96I	GGNCC	2 cut(s)	292, 898
ScaI	AGTACT	2 cut(s)	141, 444
SchI	GAGTC	3 cut(s)	238, 1037, 1640
ScrFI	CCNGG	5 cut(s)	57, 66, 872, 1141, 1142
SduI	GDGCHC	1 cut(s)	44
SfaNI	GCATC	3 cut(s)	558, 1579, 1663
SfcI	CTRYAG	4 cut(s)	407, 750, 1335, 1727
SfoI	GGCGCC	1 cut(s)	1191
SinI	GGWCC	1 cut(s)	898
SmaI	CCCGGG	1 cut(s)	1142
SmlI	CTYRAG	2 cut(s)	527, 1616
SmoI	CTYRAG	2 cut(s)	527, 1616
SnaBI	TACGTA	1 cut(s)	1771
SphI	GCATGC	1 cut(s)	269
SsiI	CCGC	3 cut(s)	571, 1193, 1749
SspDI	GGCGCC	1 cut(s)	1189
SspI	AATATT	2 cut(s)	704, 1423
SspMI	CTAG	1 cut(s)	26
StyD4I	CCNGG	5 cut(s)	55, 64, 870, 1139, 1140
StyI	CCWWGG	4 cut(s)	197, 924, 1104, 1569
TaaI	ACNGT	1 cut(s)	46
TaiI	ACGT	3 cut(s)	590, 1245, 1773
TaqI	TCGA	2 cut(s)	335, 1377
TatI	WGTACW	2 cut(s)	139, 442
TauI	GCSGC	2 cut(s)	1195, 1752
TfiI	GAWTC	4 cut(s)	125, 494, 1226, 1313
TscAI	CASTG	1 cut(s)	49
TseFI	GTSAC	2 cut(s)	583, 824
TseI	GCWGC	8 cut(s)	373, 406, 517, 749, 752, 761, 992, 1700
Tsp45I	GTSAC	2 cut(s)	583, 824
TspDTI	ATGAA	7 cut(s)	271, 471, 643, 1305, 1497, 1553, 1640
TspGWI	ACGGA	2 cut(s)	316, 1341
TspMI	CCCGGG	1 cut(s)	1140
TspRI	CASTG	1 cut(s)	49
Vha464I	CTTAAG	1 cut(s)	527
VpaK11BI	GGWCC	1 cut(s)	898
VspI	ATTAAT	1 cut(s)	1425
XapI	RAATTY	2 cut(s)	458, 1177
XceI	RCATGY	2 cut(s)	265, 269
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1295
XmaI	CCCGGG	1 cut(s)	1140
XspI	CTAG	1 cut(s)	26
ZrmI	AGTACT	2 cut(s)	141, 444
Zsp2I	ATGCAT	1 cut(s)	267

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.