Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0003669

Physical Location & Seq

Genomic Coordinates Forward (+)

44379877 .. 44389104

Gene Structure 9228 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG358300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1653 bp

ATGTCGACCCCGCAAGTGATTAAGCGTGCAAAATACAAGACTTCAATTAAAGACCCGGGAACTCCTGGTCTTCTAACTATGGATGGGAGTTACATTTTTGAGTTTGAGAGTTATCCTGATCTTCATGCATGCCGAGAAATTATTGCCAACGCCCTTGAGGCTGCAAAAGGTTCTTCCGCTGCAACAATTTCTTCTACAGCAAAAGCTTCTTCTTCTACAAATGAACAATATAGTACAGCAGAGTTAGAGCTCCGGATGAAGCTTATGCAAGAAGACAGTGAACTGCAGAAACTTCACAAGCAGTTTGTAGGCAGTGGTGTCTTGACAGAATCTGAGTTCTGGGCAACCAGGAAGAAGTTGCTTGATGGAGATAGCCGTAAAAAGTCAAAACAACGGGTTGGTTTTAAAAGTTCGATGATACTGGACATCAAACCTATGACTGATGGTCGGATGAACAAGGTTACATTCAATTTGACTGATGAGATTAAATATCAGATTTTCGCCCTGAAACCAGCTGTTCACCAGGCATATATTGATCTCGTTCCCAGTAAGATGACAGAGAAGGACTTCTGGAACAAATATTTTCGAGCCGAATACCTCCACAGTACAAAAAATGTTGTAGCAGCTGCAGCAGAAGCTGCTGAGGATGAGGAACTGGCGATTTTTTTAAAGGAAGATGAAATATTGGCAAGGGAAGCTCGGCAGAAGATTCAGCGGGTTGATCCAACTTTGGATATGGAAGCTGATCAAGGGGATGACTATATACATCTTCCGGATCATGGGATCTTTCGTGATGGCACCAAGGACATAACTGAACTACAGAATGATCAATACAGGAGGACTCTATCGCAAGACCTTAACAGACAAGGCGCTGTTGTTCTTCAAGGAAGAAATCTCGATGTGGACCCAGAAGATCCAAGAACTATAGCAGAGGCACTTATGCGGTCAAGACAGGAACCTAGTGACAGTGCTGTACAGGAGAGACTTGATAGGCTTACTCGGATGACTGAGATAGACGACCTTCGAGAATCTCATGATCATCCAGTTGCTCCATTATGTATCAAGGATCCTCGAGACTACTTTGATACACAACAAGCTAATGCACTTAGAACTTTGGATGACTCGCGTACTGGTACTGAGCAGACAAAACGCAAGCTGACTACTGAGGAAGCATATGGCGCCTTAAAGGAGTCTATATCTAAAATTAAGAGCATTGGATTGAGCAATTCCACAGTTAAACCAGAAGTTGCTCTTACGGTTTTTAATGGGCTGACCCAGAATATTTCAAGTACCAAATATCAACTTGGAAAGAATCCTCGAGAGAGTATTCTGGATGGCTTGCCAAACAGAACCAAAGAGGAACTCTTACATCATTGGATGTCCATTCAAGAACTGCTGAGGCATTTTTGGTCTTCATATCCAATTACAACTTCTTCTTTGTATACTAAGGTAGGCAGACTGAAGGATGCCATGTCACAAATTTATCGACAGCTAGAGGAGATAAAGGAAGCTGTGCAGTCAGACTTCAGGCACCAGGTCTCCCTCCTTGTTCGTCCAATGCATCAGGCTCTAGATGCTGCTTTTCAGCATTATGAAGCAGACTTACAGAAAAGAGCTGCAAAGAGTGGAGAGTTGCCAAATGGGAATGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0000439 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005675 GO:0006139 GO:0006259 GO:0006281 GO:0006351 GO:0006355 GO:0006357 GO:0006360 GO:0006366 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016310 GO:0016591 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032774 GO:0032806 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070816 GO:0071704 GO:0080090 GO:0090304 GO:0090575 GO:0097659 GO:1901360 GO:1901362 GO:1901564 GO:1901576 GO:1902494 GO:1902554 GO:1902911 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03022 ko03420 ko05203 map03022 map03420 map05203

Pfam Domains

Protein Families

BSD PH_TFIIH

Protein Analysis

550

Amino Acids

62.44

Weight (kDa)

6.03

Isoelectric Point (pI)

42.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BSD	PF03909	153 - 204	6.6e-13	BSD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003669)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55750 AT1G55750 AT1G55750 AT1G55750 AT1G55750 AT1G55750 AT3G61420 AT3G61420
fragaria_vesca	FvH4_5g28910 FvH4_5g28910 FvH4_5g28910 FvH4_5g28910 FvH4_5g28910 FvH4_5g28910 FvH4_5g28910 FvH4_6g25000
malus_domestica	MD08G1246300.v1.1 MD15G1441400.v1.1
prunus_persica	Prupe.1G583500_v2.0.a1 Prupe.1G583500_v2.0.a1 Prupe.1G583500_v2.0.a1 Prupe.1G583500_v2.0.a1
pyrus_communis	pycom08g21370 pycom15g38940
rosa_chinensis	RchiOBHm_Chr7g0221221
rosa_laevigata	RLG00000002169
rosa_multiflora	Rmu_sc0000324.1_g000015
rosa_roxburghii	Rroxscaffold_3G00238550
rosa_rugosa	Rorug07G0201400 Rorug07G0201500
rosa_samantha	Rh7AG340400 Rh7BG331500 Rh7CG358300 Rh7DG339100
rosa_wichuraiana	Rw7G028970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	797, 1178, 1530
AccI	GTMKAC	2 cut(s)	5, 1442
AccII	CGCG	1 cut(s)	1126
AccIII	TCCGGA	2 cut(s)	252, 772
AciI	CCGC	4 cut(s)	11, 177, 715, 943
AclWI	GGATC	6 cut(s)	716, 783, 791, 908, 1061, 1074
AcsI	RAATTY	1 cut(s)	1479
AcuI	CTGAAG	2 cut(s)	1481, 1510
AcyI	GRCGYC	1 cut(s)	1179
AfaI	GTAC	6 cut(s)	235, 607, 975, 1129, 1135, 1291
AfiI	CCNNNNNNNGG	1 cut(s)	779
AgsI	TTSAA	5 cut(s)	45, 469, 884, 1287, 1388
AhdI	GACNNNNNGTC	1 cut(s)	444
AjnI	CCWGG	4 cut(s)	64, 347, 522, 1533
AjuI	GAANNNNNNNTTGG	2 cut(s)	1414, 1446
Alw21I	GWGCWC	1 cut(s)	252
Alw26I	GTCTC	3 cut(s)	976, 1068, 1543
AlwI	GGATC	6 cut(s)	716, 783, 791, 908, 1061, 1074
AlwNI	CAGNNNCTG	2 cut(s)	332, 638
Ama87I	CYCGRG	3 cut(s)	55, 1071, 1317
Aor13HI	TCCGGA	2 cut(s)	252, 772
ApeKI	GCWGC	8 cut(s)	161, 179, 623, 626, 629, 638, 1577, 1616
ApoI	RAATTY	1 cut(s)	1479
Asp700I	GAANNNNTTC	1 cut(s)	566
AspLEI	GCGC	2 cut(s)	872, 1181
AspS9I	GGNCC	1 cut(s)	904
AsuC2I	CCSGG	2 cut(s)	56, 57
AsuHPI	GGTGA	1 cut(s)	512
AvaI	CYCGRG	3 cut(s)	55, 1071, 1317
AvaII	GGWCC	1 cut(s)	904
BamHI	GGATCC	1 cut(s)	1066
BanI	GGYRCC	3 cut(s)	797, 1178, 1530
BanII	GRGCYC	1 cut(s)	252
BarI	GAAGNNNNNNTAC	2 cut(s)	1587, 1619
BbsI	GAAGAC	3 cut(s)	62, 279, 1404
Bbv12I	GWGCWC	1 cut(s)	252
BbvCI	CCTCAGC	2 cut(s)	642, 1397
BbvI	GCAGC	8 cut(s)	148, 166, 613, 625, 635, 641, 1564, 1603
BccI	CCATC	5 cut(s)	77, 359, 437, 788, 1328
BceAI	ACGGC	1 cut(s)	360
BciT130I	CCWGG	4 cut(s)	66, 349, 524, 1535
BclI	TGATCA	3 cut(s)	745, 826, 1036
BcnI	CCSGG	2 cut(s)	56, 57
BcoDI	GTCTC	3 cut(s)	976, 1068, 1543
BfaI	CTAG	3 cut(s)	960, 1493, 1571
BfmI	CTRYAG	5 cut(s)	195, 284, 627, 818, 924
BfoI	RGCGCY	2 cut(s)	873, 1182
BglI	GCCNNNNNGGC	1 cut(s)	158
BisI	GCNGC	8 cut(s)	162, 180, 624, 627, 630, 639, 1578, 1617
BlsI	GCNGC	8 cut(s)	163, 181, 625, 628, 631, 640, 1579, 1618
Bme1390I	CCNGG	6 cut(s)	56, 57, 66, 349, 524, 1535
Bme18I	GGWCC	1 cut(s)	904
BmeRI	GACNNNNNGTC	1 cut(s)	444
BmeT110I	CYCGRG	3 cut(s)	55, 1071, 1317
BmgT120I	GGNCC	1 cut(s)	904
BmiI	GGNNCC	6 cut(s)	799, 906, 957, 1068, 1180, 1532
BmrFI	CCNGG	6 cut(s)	56, 57, 66, 349, 524, 1535
BmrI	ACTGGG	1 cut(s)	540
BmsI	GCATC	3 cut(s)	1456, 1564, 1570
BmuI	ACTGGG	1 cut(s)	540
BpiI	GAAGAC	3 cut(s)	62, 279, 1404
Bpu10I	CCTNAGC	2 cut(s)	642, 1397
BpuEI	CTTGAG	1 cut(s)	176
BpuMI	CCSGG	2 cut(s)	56, 57
BsaHI	GRCGYC	1 cut(s)	1179
BsaI	GGTCTC	1 cut(s)	1543
BsaJI	CCNNGG	2 cut(s)	55, 801
BsaWI	WCCGGW	2 cut(s)	252, 772
BsaXI	ACNNNNNCTCC	2 cut(s)	1523, 1553
Bsc4I	CCNNNNNNNGG	1 cut(s)	779
Bse1I	ACTGG	5 cut(s)	426, 546, 660, 1043, 1135
BseAI	TCCGGA	2 cut(s)	252, 772
BseBI	CCWGG	4 cut(s)	66, 349, 524, 1535
BseDI	CCNNGG	2 cut(s)	55, 801
BseLI	CCNNNNNNNGG	1 cut(s)	779
BseMII	CTCAG	6 cut(s)	324, 633, 999, 1128, 1155, 1388
BseNI	ACTGG	5 cut(s)	426, 546, 660, 1043, 1135
BseRI	GAGGAG	1 cut(s)	1511
BseXI	GCAGC	8 cut(s)	148, 166, 613, 625, 635, 641, 1564, 1603
BsgI	GTGCAG	1 cut(s)	1535
Bsh1236I	CGCG	1 cut(s)	1126
BshNI	GGYRCC	3 cut(s)	797, 1178, 1530
BsiHKAI	GWGCWC	1 cut(s)	252
BsiHKCI	CYCGRG	3 cut(s)	55, 1071, 1317
BsiSI	CCGG	3 cut(s)	56, 253, 773
BslI	CCNNNNNNNGG	1 cut(s)	779
BsmAI	GTCTC	3 cut(s)	976, 1068, 1543
Bso31I	GGTCTC	1 cut(s)	1543
BsoBI	CYCGRG	3 cut(s)	55, 1071, 1317
Bsp1286I	GDGCHC	1 cut(s)	252
Bsp13I	TCCGGA	2 cut(s)	252, 772
Bsp1407I	TGTACA	1 cut(s)	973
BspACI	CCGC	4 cut(s)	11, 177, 715, 943
BspCNI	CTCAG	6 cut(s)	325, 634, 1000, 1129, 1156, 1389
BspEI	TCCGGA	2 cut(s)	252, 772
BspFNI	CGCG	1 cut(s)	1126
BspHI	TCATGA	1 cut(s)	1033
BspLI	GGNNCC	6 cut(s)	799, 906, 957, 1068, 1180, 1532
BspMAI	CTGCAG	2 cut(s)	288, 631
BspPI	GGATC	6 cut(s)	716, 783, 791, 908, 1061, 1074
BspT107I	GGYRCC	3 cut(s)	797, 1178, 1530
BspTNI	GGTCTC	1 cut(s)	1543
BsrGI	TGTACA	1 cut(s)	973
BsrI	ACTGG	5 cut(s)	426, 546, 660, 1043, 1135
BssECI	CCNNGG	2 cut(s)	55, 801
BssNAI	GTATAC	1 cut(s)	1443
BssNI	GRCGYC	1 cut(s)	1179
BssT1I	CCWWGG	1 cut(s)	801
Bst1107I	GTATAC	1 cut(s)	1443
Bst2UI	CCWGG	4 cut(s)	66, 349, 524, 1535
Bst4CI	ACNGT	5 cut(s)	278, 605, 968, 1234, 1258
BstACI	GRCGYC	1 cut(s)	1179
BstAPI	GCANNNNNTGC	1 cut(s)	638
BstAUI	TGTACA	1 cut(s)	973
BstC8I	GCNNGC	4 cut(s)	27, 130, 1154, 1340
BstDEI	CTNAG	8 cut(s)	333, 642, 1008, 1106, 1137, 1164, 1397, 1446
BstFNI	CGCG	1 cut(s)	1126
BstH2I	RGCGCY	2 cut(s)	873, 1182
BstHHI	GCGC	2 cut(s)	872, 1181
BstMAI	GTCTC	3 cut(s)	976, 1068, 1543
BstMWI	GCNNNNNNNGC	7 cut(s)	158, 629, 635, 638, 695, 1178, 1574
BstNI	CCWGG	4 cut(s)	66, 349, 524, 1535
BstNSI	RCATGY	1 cut(s)	132
BstSCI	CCNGG	6 cut(s)	54, 55, 64, 347, 522, 1533
BstSFI	CTRYAG	5 cut(s)	195, 284, 627, 818, 924
BstUI	CGCG	1 cut(s)	1126
BstV1I	GCAGC	8 cut(s)	148, 166, 613, 625, 635, 641, 1564, 1603
BstV2I	GAAGAC	3 cut(s)	62, 279, 1404
BstX2I	RGATCY	3 cut(s)	783, 913, 1066
BstYI	RGATCY	3 cut(s)	783, 913, 1066
BstZ17I	GTATAC	1 cut(s)	1443
BtsI	GCAGTG	1 cut(s)	319
BtsIMutI	CAGTG	3 cut(s)	283, 319, 973
Cac8I	GCNNGC	4 cut(s)	27, 130, 1154, 1340
CaiI	CAGNNNCTG	2 cut(s)	332, 638
CciI	TCATGA	1 cut(s)	1033
CfoI	GCGC	2 cut(s)	872, 1181
Cfr13I	GGNCC	1 cut(s)	904
Cfr9I	CCCGGG	1 cut(s)	55
CsiI	ACCWGGT	1 cut(s)	1533
Csp6I	GTAC	6 cut(s)	234, 606, 974, 1128, 1134, 1290
CviAII	CATG	5 cut(s)	125, 129, 779, 1034, 1471
CviQI	GTAC	6 cut(s)	234, 606, 974, 1128, 1134, 1290
DdeI	CTNAG	8 cut(s)	333, 642, 1008, 1106, 1137, 1164, 1397, 1446
DinI	GGCGCC	1 cut(s)	1180
DraI	TTTAAA	2 cut(s)	406, 669
DriI	GACNNNNNGTC	1 cut(s)	444
Eam1105I	GACNNNNNGTC	1 cut(s)	444
Ecl136II	GAGCTC	1 cut(s)	250
Eco130I	CCWWGG	1 cut(s)	801
Eco24I	GRGCYC	1 cut(s)	252
Eco31I	GGTCTC	1 cut(s)	1543
Eco47I	GGWCC	1 cut(s)	904
Eco53kI	GAGCTC	1 cut(s)	250
Eco57I	CTGAAG	2 cut(s)	1481, 1510
Eco88I	CYCGRG	3 cut(s)	55, 1071, 1317
EcoICRI	GAGCTC	1 cut(s)	250
EcoRII	CCWGG	4 cut(s)	64, 347, 522, 1533
EcoT14I	CCWWGG	1 cut(s)	801
EcoT22I	ATGCAT	2 cut(s)	130, 1563
EcoT38I	GRGCYC	1 cut(s)	252
EgeI	GGCGCC	1 cut(s)	1180
EheI	GGCGCC	1 cut(s)	1180
ErhI	CCWWGG	1 cut(s)	801
FaeI	CATG	5 cut(s)	128, 132, 782, 1037, 1474
FalI	AAGNNNNNCTT	2 cut(s)	1236, 1268
FatI	CATG	5 cut(s)	124, 128, 778, 1033, 1470
FauI	CCCGC	2 cut(s)	18, 708
FauNDI	CATATG	1 cut(s)	1174
FbaI	TGATCA	3 cut(s)	745, 826, 1036
FblI	GTMKAC	2 cut(s)	5, 1442
Fnu4HI	GCNGC	8 cut(s)	162, 180, 624, 627, 630, 639, 1578, 1617
FriOI	GRGCYC	1 cut(s)	252
Fsp4HI	GCNGC	8 cut(s)	162, 180, 624, 627, 630, 639, 1578, 1617
FspBI	CTAG	3 cut(s)	960, 1493, 1571
GlaI	GCGC	2 cut(s)	871, 1180
GluI	GCNGC	8 cut(s)	162, 180, 624, 627, 630, 639, 1578, 1617
HaeII	RGCGCY	2 cut(s)	873, 1182
HapII	CCGG	3 cut(s)	56, 253, 773
HhaI	GCGC	2 cut(s)	872, 1181
Hin1I	GRCGYC	1 cut(s)	1179
Hin1II	CATG	5 cut(s)	128, 132, 782, 1037, 1474
Hin6I	GCGC	2 cut(s)	870, 1179
HinP1I	GCGC	2 cut(s)	870, 1179
HincII	GTYRAC	1 cut(s)	6
HindII	GTYRAC	1 cut(s)	6
HindIII	AAGCTT	2 cut(s)	204, 260
HinfI	GANTC	7 cut(s)	329, 709, 841, 1028, 1121, 1190, 1312
HpaII	CCGG	3 cut(s)	56, 253, 773
HphI	GGTGA	1 cut(s)	512
Hpy166II	GTNNAC	5 cut(s)	6, 281, 520, 904, 1443
Hpy188I	TCNGA	5 cut(s)	334, 450, 495, 1002, 1522
Hpy8I	GTNNAC	5 cut(s)	6, 281, 520, 904, 1443
HpyAV	CCTTC	3 cut(s)	556, 1031, 1456
HpyCH4III	ACNGT	5 cut(s)	278, 605, 968, 1234, 1258
HpyF10VI	GCNNNNNNNGC	7 cut(s)	158, 629, 635, 638, 695, 1178, 1574
HpyF3I	CTNAG	8 cut(s)	333, 642, 1008, 1106, 1137, 1164, 1397, 1446
Hsp92I	GRCGYC	1 cut(s)	1179
Hsp92II	CATG	5 cut(s)	128, 132, 782, 1037, 1474
HspAI	GCGC	2 cut(s)	870, 1179
KasI	GGCGCC	1 cut(s)	1178
Kpn2I	TCCGGA	2 cut(s)	252, 772
Ksp22I	TGATCA	3 cut(s)	745, 826, 1036
LmnI	GCTCC	2 cut(s)	255, 1054
Lsp1109I	GCAGC	8 cut(s)	148, 166, 613, 625, 635, 641, 1564, 1603
LweI	GCATC	3 cut(s)	1456, 1564, 1570
MabI	ACCWGGT	1 cut(s)	1533
MaeI	CTAG	3 cut(s)	960, 1493, 1571
MaeIII	GTNAC	4 cut(s)	89, 460, 962, 1473
MflI	RGATCY	3 cut(s)	783, 913, 1066
MhlI	GDGCHC	1 cut(s)	252
MluCI	AATT	8 cut(s)	45, 138, 186, 469, 1203, 1225, 1422, 1479
Mly113I	GGCGCC	1 cut(s)	1179
MlyI	GAGTC	3 cut(s)	835, 1115, 1199
MmeI	TCCRAC	2 cut(s)	428, 749
Mph1103I	ATGCAT	2 cut(s)	130, 1563
MroI	TCCGGA	2 cut(s)	252, 772
MroXI	GAANNNNTTC	1 cut(s)	566
MspA1I	CMGCKG	4 cut(s)	179, 515, 626, 715
MspI	CCGG	3 cut(s)	56, 253, 773
MspR9I	CCNGG	6 cut(s)	56, 57, 66, 349, 524, 1535
MvaI	CCWGG	4 cut(s)	66, 349, 524, 1535
MvnI	CGCG	1 cut(s)	1126
MwoI	GCNNNNNNNGC	7 cut(s)	158, 629, 635, 638, 695, 1178, 1574
NarI	GGCGCC	1 cut(s)	1179
NciI	CCSGG	2 cut(s)	56, 57
NdeI	CATATG	1 cut(s)	1174
NlaIII	CATG	5 cut(s)	128, 132, 782, 1037, 1474
NlaIV	GGNNCC	6 cut(s)	799, 906, 957, 1068, 1180, 1532
NmeAIII	GCCGAG	2 cut(s)	158, 679
NmuCI	GTSAC	2 cut(s)	962, 1473
NsiI	ATGCAT	2 cut(s)	130, 1563
NspI	RCATGY	1 cut(s)	132
PaeI	GCATGC	1 cut(s)	132
PaeR7I	CTCGAG	2 cut(s)	1071, 1317
PagI	TCATGA	1 cut(s)	1033
PdmI	GAANNNNTTC	1 cut(s)	566
PfeI	GAWTC	4 cut(s)	329, 709, 1028, 1312
PkrI	GCNGC	8 cut(s)	163, 181, 625, 628, 631, 640, 1579, 1618
PleI	GAGTC	3 cut(s)	835, 1115, 1198
PluTI	GGCGCC	1 cut(s)	1182
PpsI	GAGTC	3 cut(s)	835, 1115, 1198
Psp124BI	GAGCTC	1 cut(s)	252
Psp6I	CCWGG	4 cut(s)	64, 347, 522, 1533
PspGI	CCWGG	4 cut(s)	64, 347, 522, 1533
PspN4I	GGNNCC	6 cut(s)	799, 906, 957, 1068, 1180, 1532
PspPI	GGNCC	1 cut(s)	904
PstI	CTGCAG	2 cut(s)	288, 631
PstNI	CAGNNNCTG	2 cut(s)	332, 638
PsuI	RGATCY	3 cut(s)	783, 913, 1066
PvuII	CAGCTG	2 cut(s)	515, 626
RsaI	GTAC	6 cut(s)	235, 607, 975, 1129, 1135, 1291
RsaNI	GTAC	6 cut(s)	234, 606, 974, 1128, 1134, 1290
SacI	GAGCTC	1 cut(s)	252
SalI	GTCGAC	1 cut(s)	4
SatI	GCNGC	8 cut(s)	162, 180, 624, 627, 630, 639, 1578, 1617
Sau96I	GGNCC	1 cut(s)	904
SchI	GAGTC	3 cut(s)	835, 1115, 1199
ScrFI	CCNGG	6 cut(s)	56, 57, 66, 349, 524, 1535
SduI	GDGCHC	1 cut(s)	252
SexAI	ACCWGGT	1 cut(s)	1533
SfaNI	GCATC	3 cut(s)	1456, 1564, 1570
SfcI	CTRYAG	5 cut(s)	195, 284, 627, 818, 924
SfoI	GGCGCC	1 cut(s)	1180
Sfr274I	CTCGAG	2 cut(s)	1071, 1317
SinI	GGWCC	1 cut(s)	904
SlaI	CTCGAG	2 cut(s)	1071, 1317
SmaI	CCCGGG	1 cut(s)	57
SmlI	CTYRAG	3 cut(s)	155, 1071, 1317
SmoI	CTYRAG	3 cut(s)	155, 1071, 1317
SphI	GCATGC	1 cut(s)	132
Sse9I	AATT	8 cut(s)	45, 138, 186, 469, 1203, 1225, 1422, 1479
SsiI	CCGC	4 cut(s)	11, 177, 715, 943
SspDI	GGCGCC	1 cut(s)	1178
SspI	AATATT	3 cut(s)	581, 684, 1282
SspMI	CTAG	3 cut(s)	960, 1493, 1571
SstI	GAGCTC	1 cut(s)	252
StyD4I	CCNGG	6 cut(s)	54, 55, 64, 347, 522, 1533
StyI	CCWWGG	1 cut(s)	801
TaaI	ACNGT	5 cut(s)	278, 605, 968, 1234, 1258
TaqI	TCGA	8 cut(s)	5, 413, 586, 897, 1024, 1072, 1318, 1486
TasI	AATT	8 cut(s)	45, 138, 186, 469, 1203, 1225, 1422, 1479
TatI	WGTACW	3 cut(s)	233, 605, 973
TfiI	GAWTC	4 cut(s)	329, 709, 1028, 1312
TscAI	CASTG	3 cut(s)	283, 319, 973
TseFI	GTSAC	2 cut(s)	962, 1473
TseI	GCWGC	8 cut(s)	161, 179, 623, 626, 629, 638, 1577, 1616
Tsp45I	GTSAC	2 cut(s)	962, 1473
TspDTI	ATGAA	7 cut(s)	113, 237, 272, 467, 693, 1404, 1608
TspMI	CCCGGG	1 cut(s)	55
TspRI	CASTG	3 cut(s)	283, 319, 973
VpaK11BI	GGWCC	1 cut(s)	904
XapI	RAATTY	1 cut(s)	1479
XbaI	TCTAGA	1 cut(s)	1570
XceI	RCATGY	1 cut(s)	132
XhoI	CTCGAG	2 cut(s)	1071, 1317
XmaI	CCCGGG	1 cut(s)	55
XmiI	GTMKAC	2 cut(s)	5, 1442
XmnI	GAANNNNTTC	1 cut(s)	566
XspI	CTAG	3 cut(s)	960, 1493, 1571
Zsp2I	ATGCAT	2 cut(s)	130, 1563

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.