AT1G61050

alpha 1,4-glycosyltransferase family protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
22486657 .. 22488361
1705 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G61050.1

Sequence Viewer

Length: 1308 bp
ATGGAACAGAGCAGAAGAACAGAACAAGTTCTGTTAGTGCAGAGATTAAAAAGATTGATAGTCTCCTTTGTTTTTTGTCTTCCCATGTCTCTTCTTGGTCTCCTTCTCATGCTTCTCTTAATCTATAACAGCTTCTCTGTTTTCTCTCTTCATCTTGTTCCCAACCAACCTATTCAATCCACTCTTTCACCAACTCATCTTCAGATTCTTCATCACCAGACATCAACATCATCATCTGTGTCAGATTCTTCATTGTTACTTGTGGTGAAAGAAACCTCTTTAGGGTTCATACAGAAGCAGAACGTTTCGTCGACGAGGATAGAGAAAAAGACGAGGAGATTCAAGAGAAGTACCGAGTTAACTCCTGCGATAACACAGCGGTTACAAGTCAAATCAAGACAAAGATTCCAGACGAGGGTCAAGTCTTTGTTGTCCAAATCTTCTTGTGAGTCACTCTTCTTCATGACTTGGATCTCCTCCATAGAATCTTTCGGTGATCGAGAGCGATTCACTATAGAAAGTCTCTTCAAATTTCACCCAAATGGCTGTTTGATCTTGGTCTCAAACTCATTTGACTGTGACAGAGGAACCTTAATCTTGAAACCCTTTACAGATAAAGGGCTTAAAGTGCTTCCAATCAAACCTGATTTTGCTTACATCTTCAAAGATACATCAGCAGAGAAATGGTTTGAAAGATTGAAGAAAGGAACACTCAGTCCAGGAGTGATTCCATTAGAGCAAAACCTCTCAAACCTTCTAAGATTAGTCCTGCTCTACAAATACGGCGGAATCTACTTAGACACAGACGTTATAATCCTCAAATCTCTCAGCAATCTCCACAACGTAATCGGAGCACAAACAGTTGACCCGGTTACAAAAAAATGGAGTAGGCTCAACAACGCGGTGCTCATCTTCGACAAGAACCATCCTTTGCTTAAAAGGTTCATCGACGAATTCTCAAGAACCTTTAACGGTAACAAATGGGGACACAACGGTCCCTACTTAGTGTCGAGAGTCATTACAAGAATCAAGATATCATCCTCTTCAGATTTGGGATTCTCTGTTCTTCCACCATCTGCATTTTATCCGGTGGACTGGACTAGAATCAAAGGATTCTACAGAGCGCCCACGAATGAGAGCGATGCTTGGTTGCGGAAGAGGCTTACGCATTTACGCAAAAATACATTCGCTGTTCATCTTTGGAACAGAGAGAGTAAGAAACTCAGGATTGAAGAAGGAAGCATCATTCATCAACTCATGTCTCATTCTTGCATCTTTTGTAACTCTTCTTCTTTACATTTAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

435

Amino Acids

49.96

Weight (kDa)

10.07

Isoelectric Point (pI)

47.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gly_transf_sug PF04488 166 - 286 1e-22 Glycosyltransferase sugar-binding region containing DXD motif
Gb3_synth PF04572 305 - 429 2.3e-31 Alpha 1,4-glycosyltransferase conserved region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015496)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61050 AT1G61050
fragaria_vesca FvH4_3g04760
malus_domestica MD05G1317900.v1.1
prunus_persica Prupe.4G042800_v2.0.a1
pyrus_communis pycom05g29440
rosa_chinensis RchiOBHm_Chr5g0007781
rosa_laevigata RLG00000031488
rosa_multiflora Rmu_sc0005098.1_g000017
rosa_roxburghii Rroxscaffold_1G00068630
rosa_rugosa Rorug04G0430400
rosa_samantha Rh5AG058800 Rh5BG055500 Rh5CG065300 Rh5DG054500
rosa_wichuraiana Rw5G006100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 812
AasI GACNNNNNNGTC 1 cut(s) 993
AccI GTMKAC 1 cut(s) 311
AccII CGCG 1 cut(s) 902
AciI CCGC 4 cut(s) 379, 786, 902, 1153
AclI AACGTT 1 cut(s) 303
AclWI GGATC 1 cut(s) 479
AcsI RAATTY 2 cut(s) 530, 953
AcuI CTGAAG 2 cut(s) 185, 1029
AfaI GTAC 1 cut(s) 352
AfiI CCNNNNNNNGG 2 cut(s) 282, 415
AgsI TTSAA 8 cut(s) 176, 343, 529, 601, 664, 692, 700, 1232
AjnI CCWGG 1 cut(s) 718
AloI GAACNNNNNNTCC 4 cut(s) 700, 732, 1047, 1079
AluBI AGCT 1 cut(s) 132
AluI AGCT 1 cut(s) 132
Alw21I GWGCWC 2 cut(s) 856, 909
Alw26I GTCTC 6 cut(s) 67, 93, 104, 527, 565, 1266
AlwI GGATC 1 cut(s) 479
ApoI RAATTY 2 cut(s) 530, 953
Asp700I GAANNNNTTC 1 cut(s) 27
AspLEI GCGC 1 cut(s) 1126
AspS9I GGNCC 1 cut(s) 995
AsuC2I CCSGG 1 cut(s) 869
AsuHPI GGTGA 5 cut(s) 180, 206, 277, 506, 527
AvaII GGWCC 1 cut(s) 995
BarI GAAGNNNNNNTAC 2 cut(s) 1273, 1305
BbsI GAAGAC 1 cut(s) 71
Bbv12I GWGCWC 2 cut(s) 856, 909
BccI CCATC 2 cut(s) 933, 1081
BceAI ACGGC 1 cut(s) 799
BciT130I CCWGG 1 cut(s) 720
BcnI CCSGG 1 cut(s) 869
BcoDI GTCTC 6 cut(s) 67, 93, 104, 527, 565, 1266
BfaI CTAG 1 cut(s) 1101
BfmI CTRYAG 2 cut(s) 513, 1117
BfoI RGCGCY 1 cut(s) 1127
Bme1390I CCNGG 2 cut(s) 720, 869
Bme18I GGWCC 1 cut(s) 995
BmgT120I GGNCC 1 cut(s) 995
BmiI GGNNCC 2 cut(s) 589, 997
BmrFI CCNGG 2 cut(s) 720, 869
BmsI GCATC 3 cut(s) 1132, 1251, 1281
BoxI GACNNNNGTC 1 cut(s) 416
BpiI GAAGAC 1 cut(s) 71
BpuEI CTTGAG 1 cut(s) 943
BpuMI CCSGG 1 cut(s) 869
BsaI GGTCTC 2 cut(s) 104, 565
BsaWI WCCGGW 1 cut(s) 1087
Bsc4I CCNNNNNNNGG 2 cut(s) 282, 415
Bse1I ACTGG 1 cut(s) 1100
BseBI CCWGG 1 cut(s) 720
BseGI GGATG 2 cut(s) 925, 1037
BseLI CCNNNNNNNGG 2 cut(s) 282, 415
BseMII CTCAG 3 cut(s) 727, 841, 1237
BseNI ACTGG 1 cut(s) 1100
BseRI GAGGAG 2 cut(s) 349, 466
BsgI GTGCAG 1 cut(s) 59
Bsh1236I CGCG 1 cut(s) 902
BsiHKAI GWGCWC 2 cut(s) 856, 909
BsiSI CCGG 2 cut(s) 869, 1088
BslFI GGGAC 2 cut(s) 981, 999
BslI CCNNNNNNNGG 2 cut(s) 282, 415
BsmAI GTCTC 6 cut(s) 67, 93, 104, 527, 565, 1266
BsmFI GGGAC 2 cut(s) 981, 999
Bso31I GGTCTC 2 cut(s) 104, 565
Bsp1286I GDGCHC 2 cut(s) 856, 909
Bsp143I GATC 3 cut(s) 471, 496, 552
BspACI CCGC 4 cut(s) 379, 786, 902, 1153
BspCNI CTCAG 3 cut(s) 726, 840, 1236
BspFNI CGCG 1 cut(s) 902
BspHI TCATGA 1 cut(s) 462
BspLI GGNNCC 2 cut(s) 589, 997
BspPI GGATC 1 cut(s) 479
BspTNI GGTCTC 2 cut(s) 104, 565
BsrI ACTGG 1 cut(s) 1100
BssMI GATC 3 cut(s) 471, 496, 552
Bst2UI CCWGG 1 cut(s) 720
Bst4CI ACNGT 4 cut(s) 578, 862, 974, 995
Bst6I CTCTTC 7 cut(s) 96, 153, 461, 530, 1048, 1151, 1291
BstDEI CTNAG 6 cut(s) 713, 758, 796, 827, 1003, 1223
BstF5I GGATG 2 cut(s) 925, 1037
BstFNI CGCG 1 cut(s) 902
BstH2I RGCGCY 1 cut(s) 1127
BstHHI GCGC 1 cut(s) 1126
BstKTI GATC 3 cut(s) 474, 499, 555
BstMAI GTCTC 6 cut(s) 67, 93, 104, 527, 565, 1266
BstMBI GATC 3 cut(s) 471, 496, 552
BstMWI GCNNNNNNNGC 2 cut(s) 628, 1159
BstNI CCWGG 1 cut(s) 720
BstPAI GACNNNNGTC 1 cut(s) 416
BstSCI CCNGG 2 cut(s) 718, 867
BstSFI CTRYAG 2 cut(s) 513, 1117
BstUI CGCG 1 cut(s) 902
BstV2I GAAGAC 1 cut(s) 71
BstX2I RGATCY 1 cut(s) 471
BstYI RGATCY 1 cut(s) 471
BtgZI GCGATG 1 cut(s) 1155
BtsCI GGATG 2 cut(s) 925, 1037
CciI TCATGA 1 cut(s) 462
CfoI GCGC 1 cut(s) 1126
Cfr13I GGNCC 1 cut(s) 995
Csp6I GTAC 1 cut(s) 351
CviAII CATG 4 cut(s) 85, 109, 463, 1258
CviJI RGCY 5 cut(s) 132, 546, 622, 892, 1162
CviKI_1 RGCY 5 cut(s) 132, 546, 622, 892, 1162
CviQI GTAC 1 cut(s) 351
DdeI CTNAG 6 cut(s) 713, 758, 796, 827, 1003, 1223
DpnI GATC 3 cut(s) 473, 498, 554
DpnII GATC 3 cut(s) 471, 496, 552
DrdI GACNNNNNNGTC 1 cut(s) 993
DseDI GACNNNNNNGTC 1 cut(s) 993
Eam1104I CTCTTC 7 cut(s) 96, 153, 461, 530, 1048, 1151, 1291
EarI CTCTTC 7 cut(s) 96, 153, 461, 530, 1048, 1151, 1291
EciI GGCGGA 1 cut(s) 801
Eco31I GGTCTC 2 cut(s) 104, 565
Eco32I GATATC 1 cut(s) 1035
Eco47I GGWCC 1 cut(s) 995
Eco57I CTGAAG 2 cut(s) 185, 1029
EcoRI GAATTC 1 cut(s) 953
EcoRII CCWGG 1 cut(s) 718
EcoRV GATATC 1 cut(s) 1035
FaeI CATG 4 cut(s) 88, 112, 466, 1261
FaiI YATR 9 cut(s) 86, 110, 126, 290, 464, 482, 515, 812, 1259
FaqI GGGAC 2 cut(s) 981, 999
FatI CATG 4 cut(s) 84, 108, 462, 1257
FblI GTMKAC 1 cut(s) 311
FokI GGATG 2 cut(s) 912, 1024
FspBI CTAG 1 cut(s) 1101
GlaI GCGC 1 cut(s) 1125
HaeII RGCGCY 1 cut(s) 1127
HapII CCGG 2 cut(s) 869, 1088
HhaI GCGC 1 cut(s) 1126
Hin1II CATG 4 cut(s) 88, 112, 466, 1261
Hin6I GCGC 1 cut(s) 1124
HinP1I GCGC 1 cut(s) 1124
HincII GTYRAC 3 cut(s) 312, 360, 865
HindII GTYRAC 3 cut(s) 312, 360, 865
HpaI GTTAAC 1 cut(s) 360
HpaII CCGG 2 cut(s) 869, 1088
HphI GGTGA 5 cut(s) 180, 206, 277, 506, 527
Hpy166II GTNNAC 4 cut(s) 312, 360, 865, 1093
Hpy188I TCNGA 4 cut(s) 204, 244, 851, 1048
Hpy8I GTNNAC 4 cut(s) 312, 360, 865, 1093
Hpy99I CGWCG 3 cut(s) 313, 316, 953
HpyAV CCTTC 3 cut(s) 113, 764, 1229
HpyCH4III ACNGT 4 cut(s) 578, 862, 974, 995
HpyCH4IV ACGT 3 cut(s) 303, 807, 843
HpyCH4V TGCA 3 cut(s) 40, 1079, 1272
HpyF10VI GCNNNNNNNGC 2 cut(s) 628, 1159
HpyF3I CTNAG 6 cut(s) 713, 758, 796, 827, 1003, 1223
HpySE526I ACGT 3 cut(s) 303, 807, 843
Hsp92II CATG 4 cut(s) 88, 112, 466, 1261
HspAI GCGC 1 cut(s) 1124
KspAI GTTAAC 1 cut(s) 360
Kzo9I GATC 3 cut(s) 471, 496, 552
LmnI GCTCC 1 cut(s) 851
LweI GCATC 3 cut(s) 1132, 1251, 1281
MaeI CTAG 1 cut(s) 1101
MaeII ACGT 3 cut(s) 303, 807, 843
MaeIII GTNAC 7 cut(s) 255, 381, 450, 578, 871, 974, 1280
MalI GATC 3 cut(s) 473, 498, 554
MboI GATC 3 cut(s) 471, 496, 552
MflI RGATCY 1 cut(s) 471
MhlI GDGCHC 2 cut(s) 856, 909
MluCI AATT 2 cut(s) 530, 953
MlyI GAGTC 2 cut(s) 458, 1023
MroXI GAANNNNTTC 1 cut(s) 27
MseI TTAA 9 cut(s) 47, 119, 359, 593, 624, 936, 969, 1301, 1306
MslI CAYNNNNRTG 1 cut(s) 540
MspA1I CMGCKG 1 cut(s) 379
MspI CCGG 2 cut(s) 869, 1088
MspR9I CCNGG 2 cut(s) 720, 869
MvaI CCWGG 1 cut(s) 720
MvnI CGCG 1 cut(s) 902
MwoI GCNNNNNNNGC 2 cut(s) 628, 1159
NciI CCSGG 1 cut(s) 869
NdeII GATC 3 cut(s) 471, 496, 552
NlaIII CATG 4 cut(s) 88, 112, 466, 1261
NlaIV GGNNCC 2 cut(s) 589, 997
NmuCI GTSAC 2 cut(s) 450, 578
PagI TCATGA 1 cut(s) 462
PdmI GAANNNNTTC 1 cut(s) 27
PfoI TCCNGGA 1 cut(s) 718
PleI GAGTC 2 cut(s) 457, 1022
PpsI GAGTC 2 cut(s) 457, 1022
PshAI GACNNNNGTC 1 cut(s) 416
PsiI TTATAA 1 cut(s) 812
Psp1406I AACGTT 1 cut(s) 303
Psp6I CCWGG 1 cut(s) 718
PspGI CCWGG 1 cut(s) 718
PspN4I GGNNCC 2 cut(s) 589, 997
PspPI GGNCC 1 cut(s) 995
PsuI RGATCY 1 cut(s) 471
RsaI GTAC 1 cut(s) 352
RsaNI GTAC 1 cut(s) 351
RseI CAYNNNNRTG 1 cut(s) 540
SalI GTCGAC 1 cut(s) 310
SaqAI TTAA 9 cut(s) 47, 119, 359, 593, 624, 936, 969, 1301, 1306
Sau3AI GATC 3 cut(s) 471, 496, 552
Sau96I GGNCC 1 cut(s) 995
SchI GAGTC 2 cut(s) 458, 1023
ScrFI CCNGG 2 cut(s) 720, 869
SduI GDGCHC 2 cut(s) 856, 909
SfaNI GCATC 3 cut(s) 1132, 1251, 1281
SfcI CTRYAG 2 cut(s) 513, 1117
SgrDI CGTCGACG 1 cut(s) 310
SinI GGWCC 1 cut(s) 995
SmiMI CAYNNNNRTG 1 cut(s) 540
SmlI CTYRAG 1 cut(s) 958
SmoI CTYRAG 1 cut(s) 958
Sse9I AATT 2 cut(s) 530, 953
SsiI CCGC 4 cut(s) 379, 786, 902, 1153
SspMI CTAG 1 cut(s) 1101
StyD4I CCNGG 2 cut(s) 718, 867
TaaI ACNGT 4 cut(s) 578, 862, 974, 995
TaiI ACGT 3 cut(s) 306, 810, 846
TaqI TCGA 5 cut(s) 311, 499, 915, 948, 1010
TasI AATT 2 cut(s) 530, 953
Tru1I TTAA 9 cut(s) 47, 119, 359, 593, 624, 936, 969, 1301, 1306
Tru9I TTAA 9 cut(s) 47, 119, 359, 593, 624, 936, 969, 1301, 1306
TseFI GTSAC 2 cut(s) 450, 578
Tsp45I GTSAC 2 cut(s) 450, 578
TspDTI ATGAA 8 cut(s) 140, 200, 240, 277, 451, 934, 1184, 1238
VpaK11BI GGWCC 1 cut(s) 995
XapI RAATTY 2 cut(s) 530, 953
XmiI GTMKAC 1 cut(s) 311
XmnI GAANNNNTTC 1 cut(s) 27
XspI CTAG 1 cut(s) 1101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.