Alpha 1,4-glycosyltransferase conserved region
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G61050 AT1G61050 |
| fragaria_vesca | FvH4_3g04760 |
| malus_domestica | MD05G1317900.v1.1 |
| prunus_persica | Prupe.4G042800_v2.0.a1 |
| pyrus_communis | pycom05g29440 |
| rosa_chinensis | RchiOBHm_Chr5g0007781 |
| rosa_laevigata | RLG00000031488 |
| rosa_multiflora | Rmu_sc0005098.1_g000017 |
| rosa_roxburghii | Rroxscaffold_1G00068630 |
| rosa_rugosa | Rorug04G0430400 |
| rosa_samantha | Rh5AG058800 Rh5BG055500 Rh5CG065300 Rh5DG054500 |
| rosa_wichuraiana | Rw5G006100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1148 |
| AccI | GTMKAC | 2 cut(s) | 138, 1242 |
| AciI | CCGC | 5 cut(s) | 180, 191, 201, 215, 228 |
| AclWI | GGATC | 1 cut(s) | 1136 |
| AcsI | RAATTY | 2 cut(s) | 667, 1055 |
| AcuI | CTGAAG | 5 cut(s) | 272, 362, 722, 1289, 1349 |
| AfaI | GTAC | 1 cut(s) | 878 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 247, 984, 1148 |
| AgsI | TTSAA | 6 cut(s) | 403, 631, 695, 997, 1125, 1407 |
| AjnI | CCWGG | 2 cut(s) | 820, 1147 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 611, 643 |
| AluBI | AGCT | 7 cut(s) | 147, 286, 451, 614, 1267, 1290, 1410 |
| AluI | AGCT | 7 cut(s) | 147, 286, 451, 614, 1267, 1290, 1410 |
| Alw21I | GWGCWC | 1 cut(s) | 350 |
| Alw26I | GTCTC | 7 cut(s) | 227, 464, 492, 667, 811, 835, 1114 |
| AlwI | GGATC | 1 cut(s) | 1136 |
| AoxI | GGCC | 2 cut(s) | 249, 360 |
| ApaI | GGGCCC | 1 cut(s) | 253 |
| ApeKI | GCWGC | 1 cut(s) | 1255 |
| ApoI | RAATTY | 2 cut(s) | 667, 1055 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 275, 307 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 535 |
| AspLEI | GCGC | 1 cut(s) | 447 |
| AspS9I | GGNCC | 4 cut(s) | 249, 250, 1097, 1226 |
| AsuHPI | GGTGA | 3 cut(s) | 37, 325, 1204 |
| AvaII | GGWCC | 2 cut(s) | 1097, 1226 |
| BaeGI | GKGCMC | 1 cut(s) | 253 |
| BanII | GRGCYC | 2 cut(s) | 253, 958 |
| BbsI | GAAGAC | 3 cut(s) | 148, 285, 1330 |
| Bbv12I | GWGCWC | 1 cut(s) | 350 |
| BbvCI | CCTCAGC | 1 cut(s) | 780 |
| BbvI | GCAGC | 1 cut(s) | 1242 |
| BccI | CCATC | 2 cut(s) | 1067, 1385 |
| BceAI | ACGGC | 2 cut(s) | 691, 1188 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1237, 1271 |
| BciT130I | CCWGG | 2 cut(s) | 822, 1149 |
| BclI | TGATCA | 1 cut(s) | 1354 |
| BcoDI | GTCTC | 7 cut(s) | 227, 464, 492, 667, 811, 835, 1114 |
| BfaI | CTAG | 1 cut(s) | 99 |
| BglII | AGATCT | 1 cut(s) | 1280 |
| BisI | GCNGC | 3 cut(s) | 215, 228, 1256 |
| BlsI | GCNGC | 3 cut(s) | 216, 229, 1257 |
| Bme1390I | CCNGG | 2 cut(s) | 822, 1149 |
| Bme18I | GGWCC | 2 cut(s) | 1097, 1226 |
| BmgT120I | GGNCC | 4 cut(s) | 249, 250, 1097, 1226 |
| BmiI | GGNNCC | 5 cut(s) | 198, 251, 252, 989, 1202 |
| BmrFI | CCNGG | 2 cut(s) | 822, 1149 |
| BpiI | GAAGAC | 3 cut(s) | 148, 285, 1330 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1229, 1261 |
| Bpu10I | CCTNAGC | 2 cut(s) | 780, 860 |
| BpuEI | CTTGAG | 2 cut(s) | 544, 1096 |
| BsaI | GGTCTC | 2 cut(s) | 811, 1114 |
| BsaJI | CCNNGG | 2 cut(s) | 1147, 1176 |
| BsaWI | WCCGGW | 1 cut(s) | 1189 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 611, 641 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 247, 984, 1148 |
| Bse118I | RCCGGY | 1 cut(s) | 977 |
| Bse3DI | GCAATG | 2 cut(s) | 817, 1295 |
| BseBI | CCWGG | 2 cut(s) | 822, 1149 |
| BseDI | CCNNGG | 2 cut(s) | 1147, 1176 |
| BseGI | GGATG | 2 cut(s) | 581, 1027 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 247, 984, 1148 |
| BseMI | GCAATG | 2 cut(s) | 817, 1295 |
| BseMII | CTCAG | 4 cut(s) | 46, 503, 771, 971 |
| BseSI | GKGCMC | 1 cut(s) | 253 |
| BseXI | GCAGC | 1 cut(s) | 1242 |
| BshFI | GGCC | 2 cut(s) | 251, 362 |
| BsiHKAI | GWGCWC | 1 cut(s) | 350 |
| BsiSI | CCGG | 3 cut(s) | 194, 978, 1190 |
| BslFI | GGGAC | 2 cut(s) | 21, 702 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 247, 984, 1148 |
| BsmAI | GTCTC | 7 cut(s) | 227, 464, 492, 667, 811, 835, 1114 |
| BsmBI | CGTCTC | 2 cut(s) | 464, 492 |
| BsmFI | GGGAC | 2 cut(s) | 21, 702 |
| BsnI | GGCC | 2 cut(s) | 251, 362 |
| Bso31I | GGTCTC | 2 cut(s) | 811, 1114 |
| Bsp120I | GGGCCC | 1 cut(s) | 249 |
| Bsp1286I | GDGCHC | 3 cut(s) | 253, 350, 958 |
| Bsp1407I | TGTACA | 1 cut(s) | 876 |
| Bsp143I | GATC | 4 cut(s) | 68, 1128, 1280, 1354 |
| BspACI | CCGC | 5 cut(s) | 180, 191, 201, 215, 228 |
| BspANI | GGCC | 2 cut(s) | 251, 362 |
| BspCNI | CTCAG | 4 cut(s) | 45, 502, 772, 970 |
| BspHI | TCATGA | 1 cut(s) | 567 |
| BspLI | GGNNCC | 5 cut(s) | 198, 251, 252, 989, 1202 |
| BspPI | GGATC | 1 cut(s) | 1136 |
| BspQI | GCTCTTC | 1 cut(s) | 338 |
| BspTNI | GGTCTC | 2 cut(s) | 811, 1114 |
| BsrDI | GCAATG | 2 cut(s) | 817, 1295 |
| BsrFI | RCCGGY | 1 cut(s) | 977 |
| BsrGI | TGTACA | 1 cut(s) | 876 |
| BssAI | RCCGGY | 1 cut(s) | 977 |
| BssECI | CCNNGG | 2 cut(s) | 1147, 1176 |
| BssMI | GATC | 4 cut(s) | 68, 1128, 1280, 1354 |
| BssNAI | GTATAC | 1 cut(s) | 1243 |
| Bst1107I | GTATAC | 1 cut(s) | 1243 |
| Bst2UI | CCWGG | 2 cut(s) | 822, 1149 |
| Bst4CI | ACNGT | 1 cut(s) | 1165 |
| Bst6I | CTCTTC | 4 cut(s) | 111, 338, 541, 1043 |
| BstAUI | TGTACA | 1 cut(s) | 876 |
| BstC8I | GCNNGC | 2 cut(s) | 449, 867 |
| BstDEI | CTNAG | 7 cut(s) | 32, 89, 408, 489, 780, 860, 957 |
| BstF5I | GGATG | 2 cut(s) | 581, 1027 |
| BstHHI | GCGC | 1 cut(s) | 447 |
| BstKTI | GATC | 4 cut(s) | 71, 1131, 1283, 1357 |
| BstMAI | GTCTC | 7 cut(s) | 227, 464, 492, 667, 811, 835, 1114 |
| BstMBI | GATC | 4 cut(s) | 68, 1128, 1280, 1354 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 987, 1264 |
| BstNI | CCWGG | 2 cut(s) | 822, 1149 |
| BstSCI | CCNGG | 2 cut(s) | 820, 1147 |
| BstSLI | GKGCMC | 1 cut(s) | 253 |
| BstV1I | GCAGC | 1 cut(s) | 1242 |
| BstV2I | GAAGAC | 3 cut(s) | 148, 285, 1330 |
| BstX2I | RGATCY | 1 cut(s) | 1280 |
| BstYI | RGATCY | 1 cut(s) | 1280 |
| BstZ17I | GTATAC | 1 cut(s) | 1243 |
| BsuRI | GGCC | 2 cut(s) | 251, 362 |
| BtsCI | GGATG | 2 cut(s) | 581, 1027 |
| BtsIMutI | CAGTG | 1 cut(s) | 1138 |
| Cac8I | GCNNGC | 2 cut(s) | 449, 867 |
| CciI | TCATGA | 1 cut(s) | 567 |
| CfoI | GCGC | 1 cut(s) | 447 |
| Cfr10I | RCCGGY | 1 cut(s) | 977 |
| Cfr13I | GGNCC | 4 cut(s) | 249, 250, 1097, 1226 |
| CsiI | ACCWGGT | 1 cut(s) | 820 |
| Csp6I | GTAC | 1 cut(s) | 877 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 868, 903 |
| CviAII | CATG | 2 cut(s) | 334, 568 |
| CviQI | GTAC | 1 cut(s) | 877 |
| DdeI | CTNAG | 7 cut(s) | 32, 89, 408, 489, 780, 860, 957 |
| DpnI | GATC | 4 cut(s) | 70, 1130, 1282, 1356 |
| DpnII | GATC | 4 cut(s) | 68, 1128, 1280, 1354 |
| Eam1104I | CTCTTC | 4 cut(s) | 111, 338, 541, 1043 |
| EarI | CTCTTC | 4 cut(s) | 111, 338, 541, 1043 |
| Eco24I | GRGCYC | 2 cut(s) | 253, 958 |
| Eco31I | GGTCTC | 2 cut(s) | 811, 1114 |
| Eco47I | GGWCC | 2 cut(s) | 1097, 1226 |
| Eco57I | CTGAAG | 5 cut(s) | 272, 362, 722, 1289, 1349 |
| EcoO109I | RGGNCCY | 1 cut(s) | 250 |
| EcoRII | CCWGG | 2 cut(s) | 820, 1147 |
| EcoT38I | GRGCYC | 2 cut(s) | 253, 958 |
| Esp3I | CGTCTC | 2 cut(s) | 464, 492 |
| FaeI | CATG | 2 cut(s) | 337, 571 |
| FaqI | GGGAC | 2 cut(s) | 21, 702 |
| FatI | CATG | 2 cut(s) | 333, 567 |
| FauI | CCCGC | 3 cut(s) | 187, 198, 208 |
| FbaI | TGATCA | 1 cut(s) | 1354 |
| FblI | GTMKAC | 2 cut(s) | 138, 1242 |
| Fnu4HI | GCNGC | 3 cut(s) | 215, 228, 1256 |
| FokI | GGATG | 2 cut(s) | 568, 1014 |
| FriOI | GRGCYC | 2 cut(s) | 253, 958 |
| Fsp4HI | GCNGC | 3 cut(s) | 215, 228, 1256 |
| FspBI | CTAG | 1 cut(s) | 99 |
| GlaI | GCGC | 1 cut(s) | 446 |
| GluI | GCNGC | 3 cut(s) | 215, 228, 1256 |
| HaeIII | GGCC | 2 cut(s) | 251, 362 |
| HapII | CCGG | 3 cut(s) | 194, 978, 1190 |
| HhaI | GCGC | 1 cut(s) | 447 |
| Hin1II | CATG | 2 cut(s) | 337, 571 |
| Hin6I | GCGC | 1 cut(s) | 445 |
| HinP1I | GCGC | 1 cut(s) | 445 |
| HindIII | AAGCTT | 2 cut(s) | 284, 1408 |
| HinfI | GANTC | 7 cut(s) | 8, 166, 493, 589, 677, 828, 1024 |
| HpaII | CCGG | 3 cut(s) | 194, 978, 1190 |
| HphI | GGTGA | 3 cut(s) | 37, 325, 1204 |
| Hpy166II | GTNNAC | 2 cut(s) | 139, 1243 |
| Hpy188III | TCNNGA | 9 cut(s) | 340, 423, 523, 568, 674, 700, 746, 1052, 1113 |
| Hpy8I | GTNNAC | 2 cut(s) | 139, 1243 |
| HpyAV | CCTTC | 3 cut(s) | 247, 1324, 1333 |
| HpyCH4III | ACNGT | 1 cut(s) | 1165 |
| HpyCH4V | TGCA | 6 cut(s) | 55, 370, 552, 1295, 1300, 1400 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 987, 1264 |
| HpyF3I | CTNAG | 7 cut(s) | 32, 89, 408, 489, 780, 860, 957 |
| Hsp92II | CATG | 2 cut(s) | 337, 571 |
| HspAI | GCGC | 1 cut(s) | 445 |
| Ksp22I | TGATCA | 1 cut(s) | 1354 |
| Kzo9I | GATC | 4 cut(s) | 68, 1128, 1280, 1354 |
| LguI | GCTCTTC | 1 cut(s) | 338 |
| LmnI | GCTCC | 3 cut(s) | 748, 987, 1200 |
| Lsp1109I | GCAGC | 1 cut(s) | 1242 |
| MabI | ACCWGGT | 1 cut(s) | 820 |
| MaeI | CTAG | 1 cut(s) | 99 |
| MaeIII | GTNAC | 4 cut(s) | 1076, 1088, 1168, 1382 |
| MalI | GATC | 4 cut(s) | 70, 1130, 1282, 1356 |
| MboI | GATC | 4 cut(s) | 68, 1128, 1280, 1354 |
| MfeI | CAATTG | 5 cut(s) | 50, 738, 834, 963, 982 |
| MflI | RGATCY | 1 cut(s) | 1280 |
| MhlI | GDGCHC | 3 cut(s) | 253, 350, 958 |
| MlyI | GAGTC | 5 cut(s) | 2, 160, 502, 583, 837 |
| MroXI | GAANNNNTTC | 1 cut(s) | 535 |
| MseI | TTAA | 2 cut(s) | 920, 1155 |
| MslI | CAYNNNNRTG | 1 cut(s) | 642 |
| MspI | CCGG | 3 cut(s) | 194, 978, 1190 |
| MspR9I | CCNGG | 2 cut(s) | 822, 1149 |
| MunI | CAATTG | 5 cut(s) | 50, 738, 834, 963, 982 |
| MvaI | CCWGG | 2 cut(s) | 822, 1149 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 987, 1264 |
| NdeII | GATC | 4 cut(s) | 68, 1128, 1280, 1354 |
| NlaIII | CATG | 2 cut(s) | 337, 571 |
| NlaIV | GGNNCC | 5 cut(s) | 198, 251, 252, 989, 1202 |
| NmeAIII | GCCGAG | 1 cut(s) | 1157 |
| NmuCI | GTSAC | 1 cut(s) | 1088 |
| PagI | TCATGA | 1 cut(s) | 567 |
| PciSI | GCTCTTC | 1 cut(s) | 338 |
| PdmI | GAANNNNTTC | 1 cut(s) | 535 |
| PfeI | GAWTC | 2 cut(s) | 677, 1024 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1148 |
| PkrI | GCNGC | 3 cut(s) | 216, 229, 1257 |
| PleI | GAGTC | 5 cut(s) | 2, 160, 501, 583, 836 |
| PpsI | GAGTC | 5 cut(s) | 2, 160, 501, 583, 836 |
| Psp6I | CCWGG | 2 cut(s) | 820, 1147 |
| PspGI | CCWGG | 2 cut(s) | 820, 1147 |
| PspN4I | GGNNCC | 5 cut(s) | 198, 251, 252, 989, 1202 |
| PspOMI | GGGCCC | 1 cut(s) | 249 |
| PspPI | GGNCC | 4 cut(s) | 249, 250, 1097, 1226 |
| PsuI | RGATCY | 1 cut(s) | 1280 |
| RsaI | GTAC | 1 cut(s) | 878 |
| RsaNI | GTAC | 1 cut(s) | 877 |
| RseI | CAYNNNNRTG | 1 cut(s) | 642 |
| SapI | GCTCTTC | 1 cut(s) | 338 |
| SaqAI | TTAA | 2 cut(s) | 920, 1155 |
| SatI | GCNGC | 3 cut(s) | 215, 228, 1256 |
| Sau3AI | GATC | 4 cut(s) | 68, 1128, 1280, 1354 |
| Sau96I | GGNCC | 4 cut(s) | 249, 250, 1097, 1226 |
| SchI | GAGTC | 5 cut(s) | 2, 160, 502, 583, 837 |
| ScrFI | CCNGG | 2 cut(s) | 822, 1149 |
| SduI | GDGCHC | 3 cut(s) | 253, 350, 958 |
| SexAI | ACCWGGT | 1 cut(s) | 820 |
| SinI | GGWCC | 2 cut(s) | 1097, 1226 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 642 |
| SmlI | CTYRAG | 2 cut(s) | 523, 1111 |
| SmoI | CTYRAG | 2 cut(s) | 523, 1111 |
| SsiI | CCGC | 5 cut(s) | 180, 191, 201, 215, 228 |
| SspMI | CTAG | 1 cut(s) | 99 |
| StyD4I | CCNGG | 2 cut(s) | 820, 1147 |
| TaaI | ACNGT | 1 cut(s) | 1165 |
| TaqI | TCGA | 4 cut(s) | 727, 1017, 1041, 1247 |
| TatI | WGTACW | 1 cut(s) | 876 |
| TauI | GCSGC | 2 cut(s) | 217, 230 |
| TfiI | GAWTC | 2 cut(s) | 677, 1024 |
| Tru1I | TTAA | 2 cut(s) | 920, 1155 |
| Tru9I | TTAA | 2 cut(s) | 920, 1155 |
| TscAI | CASTG | 1 cut(s) | 1138 |
| TseFI | GTSAC | 1 cut(s) | 1088 |
| TseI | GCWGC | 1 cut(s) | 1255 |
| Tsp45I | GTSAC | 1 cut(s) | 1088 |
| TspDTI | ATGAA | 5 cut(s) | 267, 556, 570, 953, 1036 |
| TspGWI | ACGGA | 1 cut(s) | 474 |
| TspRI | CASTG | 1 cut(s) | 1138 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1148 |
| VpaK11BI | GGWCC | 2 cut(s) | 1097, 1226 |
| XapI | RAATTY | 2 cut(s) | 667, 1055 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 649 |
| XmiI | GTMKAC | 2 cut(s) | 138, 1242 |
| XmnI | GAANNNNTTC | 1 cut(s) | 535 |
| XspI | CTAG | 1 cut(s) | 99 |