AT1G62400

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
23089610 .. 23091732
2123 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G62400.1

Sequence Viewer

Length: 1173 bp
ATGTCTGGTTTATGTTTCAATCCGTTTCGTCTACGTTGGTCTCTAAGATCCAAATTACCTTTAGAGCCGTCCCTCCCGAATTTACCCTGTAACCCATCTTCCTCCAAAACCAACCGGTATGCAGAAGCAGAGACGATGGAGAAGAAGAGATTTGACAGTATGGAATCTTGGTCGATGATCCTCGAGTCCGAGAACGTGGAGACATGGGAAGCTTCTAAAGGCGAAAGAGAGGAATGGACCGCAGATCTTTCGCAGCTATTTATCGGAAACAAATTTGCTTCCGGAGCACACTCTAGAATATACAGAGGGATCTACAAACAAAGAGCCGTTGCCGTGAAGATGGTGAGGATCCCAACACACAAGGAAGAGACAAGGGCTAAGCTTGAACAACAGTTTAAGTCCGAGGTTGCTCTGCTTTCTCGTCTCTTTCACCCTAACATCGTTCAGTTCATTGCGGCGTGCAAGAAACCGCCGGTGTACTGCATTATAACAGAGTACATGTCACAAGGAAACCTCCGAATGTACCTAAACAAGAAAGAGCCTTACTCGCTTTCGATCGAGACCGTACTAAGGCTGGCTCTAGACATCTCAAGAGGAATGGAGTATCTTCACTCGCAAGGTGTTATCCACAGAGACCTAAAGTCCAACAATTTGCTTTTGAACGACGAGATGAGAGTTAAAGTTGCAGACTTTGGGACATCTTGTCTTGAGACGCAATGCAGAGAGGCCAAGGGTAACATGGGAACTTATAGATGGATGGCTCCAGAGATGATCAAGGAGAAGCCTTATACCAGAAAAGTCGATGTTTATAGCTTTGGCATCGTTCTATGGGAACTCACCACCGCGTTGCTTCCGTTCCAAGGCATGACTCCTGTGCAAGCCGCATTCGCAGTCGCTGAAAAGAACGAAAGACCACCATTGCCGGCGAGCTGTCAACCAGCGCTAGCTCATCTAATCAAGAGGTGTTGGTCAGAGAATCCGTCGAAGCGGCCAGACTTCTCAAACATAGTGGCGGTGCTAGAGAAGTACGACGAGTGTGTCAAAGAAGGACTGCCTTTGACGTCACACGCAAGCCTAACGAAGACAAAGAAAGCTATTCTTGATCACCTTAAAGGCTGTGTCACATCCATTAGCTCACCATTTTCTTCCTCCTCTGTTCCTGTAAATGCCTAG

Protein Analysis

390

Amino Acids

44.28

Weight (kDa)

9.08

Isoelectric Point (pI)

51.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 89 - 339 7e-67 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 94 - 337 8.4e-56 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014397)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62400
fragaria_vesca FvH4_3g01140
malus_domestica MD05G1356400.v1.1 MD10G1329500.v1.1
prunus_persica Prupe.4G012600_v2.0.a1
pyrus_communis pycom10g27930
rosa_chinensis RchiOBHm_Chr5g0001701
rosa_laevigata RLG00000030960
rosa_multiflora Rmu_ssc0000237.1_g000023
rosa_roxburghii Rroxscaffold_1G00071160 Rroxscaffold_1G00074620
rosa_rugosa Rorug04G0392000
rosa_samantha Rh5AG013400 Rh5BG016800 Rh5CG014400 Rh5DG014800
rosa_wichuraiana Rw5G001300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 488
AasI GACNNNNNNGTC 1 cut(s) 1037
AatII GACGTC 1 cut(s) 1064
AccI GTMKAC 1 cut(s) 31
AccII CGCG 1 cut(s) 845
AccIII TCCGGA 1 cut(s) 281
AciI CCGC 7 cut(s) 240, 455, 470, 843, 882, 988, 1013
AclWI GGATC 5 cut(s) 42, 172, 317, 343, 356
AcoI YGGCCR 1 cut(s) 989
AcsI RAATTY 2 cut(s) 79, 272
AcyI GRCGYC 1 cut(s) 1061
AfaI GTAC 5 cut(s) 479, 497, 524, 567, 1028
AfeI AGCGCT 1 cut(s) 942
AfiI CCNNNNNNNGG 2 cut(s) 570, 860
AflIII ACRYGT 1 cut(s) 498
AgeI ACCGGT 1 cut(s) 114
AgsI TTSAA 3 cut(s) 19, 386, 661
AhdI GACNNNNNGTC 2 cut(s) 640, 702
AluBI AGCT 8 cut(s) 212, 256, 382, 813, 930, 947, 1094, 1134
AluI AGCT 8 cut(s) 212, 256, 382, 813, 930, 947, 1094, 1134
Alw21I GWGCWC 1 cut(s) 289
Alw26I GTCTC 8 cut(s) 45, 125, 194, 362, 428, 554, 627, 704
AlwI GGATC 5 cut(s) 42, 172, 317, 343, 356
AlwNI CAGNNNCTG 1 cut(s) 896
Ama87I CYCGRG 1 cut(s) 182
Aor13HI TCCGGA 1 cut(s) 281
Aor51HI AGCGCT 1 cut(s) 942
AoxI GGCC 2 cut(s) 726, 989
ApeKI GCWGC 1 cut(s) 253
ApoI RAATTY 2 cut(s) 79, 272
AsiGI ACCGGT 1 cut(s) 114
AspLEI GCGC 1 cut(s) 943
AspS9I GGNCC 1 cut(s) 237
AsuHPI GGTGA 5 cut(s) 355, 422, 829, 1097, 1128
AsuNHI GCTAGC 1 cut(s) 943
AvaI CYCGRG 1 cut(s) 182
AvaII GGWCC 1 cut(s) 237
BamHI GGATCC 1 cut(s) 348
BarI GAAGNNNNNNTAC 2 cut(s) 82, 114
BbsI GAAGAC 1 cut(s) 1088
Bbv12I GWGCWC 1 cut(s) 289
BbvI GCAGC 1 cut(s) 265
BccI CCATC 5 cut(s) 103, 130, 334, 747, 751
BceAI ACGGC 3 cut(s) 52, 311, 317
BcgI CGANNNNNNTGC 2 cut(s) 231, 265
BclI TGATCA 2 cut(s) 771, 1102
BcoDI GTCTC 8 cut(s) 45, 125, 194, 362, 428, 554, 627, 704
BfaI CTAG 5 cut(s) 294, 581, 944, 1019, 1171
BfoI RGCGCY 1 cut(s) 944
BglII AGATCT 1 cut(s) 244
BisI GCNGC 4 cut(s) 254, 456, 882, 989
BlpI GCTNAGC 1 cut(s) 378
BlsI GCNGC 4 cut(s) 255, 457, 883, 990
Bme18I GGWCC 1 cut(s) 237
BmeRI GACNNNNNGTC 2 cut(s) 640, 702
BmeT110I CYCGRG 1 cut(s) 182
BmgT120I GGNCC 1 cut(s) 237
BmiI GGNNCC 2 cut(s) 350, 762
BmsI GCATC 1 cut(s) 828
BmtI GCTAGC 1 cut(s) 947
BpiI GAAGAC 1 cut(s) 1088
BplI GAGNNNNNCTC 2 cut(s) 530, 562
BpmI CTGGAG 1 cut(s) 747
Bpu1102I GCTNAGC 1 cut(s) 378
BpuEI CTTGAG 2 cut(s) 574, 728
BsaHI GRCGYC 1 cut(s) 1061
BsaI GGTCTC 3 cut(s) 45, 554, 627
BsaJI CCNNGG 3 cut(s) 402, 729, 859
BsaWI WCCGGW 2 cut(s) 114, 281
Bsc4I CCNNNNNNNGG 2 cut(s) 570, 860
Bse118I RCCGGY 3 cut(s) 114, 472, 922
Bse3DI GCAATG 3 cut(s) 450, 722, 917
BseAI TCCGGA 1 cut(s) 281
BseDI CCNNGG 3 cut(s) 402, 729, 859
BseGI GGATG 2 cut(s) 762, 1124
BseLI CCNNNNNNNGG 2 cut(s) 570, 860
BseMI GCAATG 3 cut(s) 450, 722, 917
BseRI GAGGAG 1 cut(s) 1141
BseXI GCAGC 1 cut(s) 265
Bsh1236I CGCG 1 cut(s) 845
Bsh1285I CGRYCG 1 cut(s) 558
BshFI GGCC 2 cut(s) 728, 991
BshTI ACCGGT 1 cut(s) 114
BsiEI CGRYCG 1 cut(s) 558
BsiHKAI GWGCWC 1 cut(s) 289
BsiHKCI CYCGRG 1 cut(s) 182
BsiSI CCGG 4 cut(s) 115, 282, 473, 923
BslFI GGGAC 2 cut(s) 55, 709
BslI CCNNNNNNNGG 2 cut(s) 570, 860
BsmAI GTCTC 8 cut(s) 45, 125, 194, 362, 428, 554, 627, 704
BsmBI CGTCTC 3 cut(s) 125, 428, 704
BsmFI GGGAC 2 cut(s) 55, 709
BsmI GAATGC 1 cut(s) 884
BsnI GGCC 2 cut(s) 728, 991
Bso31I GGTCTC 3 cut(s) 45, 554, 627
BsoBI CYCGRG 1 cut(s) 182
Bsp1286I GDGCHC 1 cut(s) 289
Bsp13I TCCGGA 1 cut(s) 281
Bsp143I GATC 8 cut(s) 47, 177, 244, 309, 348, 555, 771, 1102
Bsp1720I GCTNAGC 1 cut(s) 378
BspACI CCGC 7 cut(s) 240, 455, 470, 843, 882, 988, 1013
BspANI GGCC 2 cut(s) 728, 991
BspEI TCCGGA 1 cut(s) 281
BspFNI CGCG 1 cut(s) 845
BspLI GGNNCC 2 cut(s) 350, 762
BspOI GCTAGC 1 cut(s) 947
BspPI GGATC 5 cut(s) 42, 172, 317, 343, 356
BspTNI GGTCTC 3 cut(s) 45, 554, 627
BsrDI GCAATG 3 cut(s) 450, 722, 917
BsrFI RCCGGY 3 cut(s) 114, 472, 922
BssAI RCCGGY 3 cut(s) 114, 472, 922
BssECI CCNNGG 3 cut(s) 402, 729, 859
BssMI GATC 8 cut(s) 47, 177, 244, 309, 348, 555, 771, 1102
BssNI GRCGYC 1 cut(s) 1061
BssT1I CCWWGG 2 cut(s) 729, 859
Bst4CI ACNGT 3 cut(s) 158, 393, 565
Bst6I CTCTTC 2 cut(s) 140, 360
BstACI GRCGYC 1 cut(s) 1061
BstC8I GCNNGC 7 cut(s) 460, 576, 879, 924, 928, 945, 1072
BstDEI CTNAG 3 cut(s) 44, 378, 569
BstF5I GGATG 2 cut(s) 762, 1124
BstFNI CGCG 1 cut(s) 845
BstH2I RGCGCY 1 cut(s) 944
BstHHI GCGC 1 cut(s) 943
BstKTI GATC 8 cut(s) 50, 180, 247, 312, 351, 558, 774, 1105
BstMAI GTCTC 8 cut(s) 45, 125, 194, 362, 428, 554, 627, 704
BstMBI GATC 8 cut(s) 47, 177, 244, 309, 348, 555, 771, 1102
BstMCI CGRYCG 1 cut(s) 558
BstMWI GCNNNNNNNGC 3 cut(s) 284, 547, 887
BstNSI RCATGY 1 cut(s) 502
BstUI CGCG 1 cut(s) 845
BstV1I GCAGC 1 cut(s) 265
BstV2I GAAGAC 1 cut(s) 1088
BstX2I RGATCY 4 cut(s) 47, 244, 309, 348
BstYI RGATCY 4 cut(s) 47, 244, 309, 348
BsuRI GGCC 2 cut(s) 728, 991
BtsCI GGATG 2 cut(s) 762, 1124
Cac8I GCNNGC 7 cut(s) 460, 576, 879, 924, 928, 945, 1072
CaiI CAGNNNCTG 1 cut(s) 896
CfoI GCGC 1 cut(s) 943
Cfr10I RCCGGY 3 cut(s) 114, 472, 922
Cfr13I GGNCC 1 cut(s) 237
CseI GACGC 1 cut(s) 721
Csp6I GTAC 5 cut(s) 478, 496, 523, 566, 1027
CspAI ACCGGT 1 cut(s) 114
CspCI CAANNNNNGTGG 2 cut(s) 990, 1025
CviAII CATG 4 cut(s) 204, 499, 739, 865
CviQI GTAC 5 cut(s) 478, 496, 523, 566, 1027
DdeI CTNAG 3 cut(s) 44, 378, 569
DpnI GATC 8 cut(s) 49, 179, 246, 311, 350, 557, 773, 1104
DpnII GATC 8 cut(s) 47, 177, 244, 309, 348, 555, 771, 1102
DrdI GACNNNNNNGTC 1 cut(s) 1037
DriI GACNNNNNGTC 2 cut(s) 640, 702
DseDI GACNNNNNNGTC 1 cut(s) 1037
EaeI YGGCCR 1 cut(s) 989
Eam1104I CTCTTC 2 cut(s) 140, 360
Eam1105I GACNNNNNGTC 2 cut(s) 640, 702
EarI CTCTTC 2 cut(s) 140, 360
Eco130I CCWWGG 2 cut(s) 729, 859
Eco31I GGTCTC 3 cut(s) 45, 554, 627
Eco47I GGWCC 1 cut(s) 237
Eco47III AGCGCT 1 cut(s) 942
Eco88I CYCGRG 1 cut(s) 182
EcoT14I CCWWGG 2 cut(s) 729, 859
ErhI CCWWGG 2 cut(s) 729, 859
Esp3I CGTCTC 3 cut(s) 125, 428, 704
FaeI CATG 4 cut(s) 207, 502, 742, 868
FalI AAGNNNNNCTT 2 cut(s) 1083, 1115
FaqI GGGAC 2 cut(s) 55, 709
FatI CATG 4 cut(s) 203, 498, 738, 864
FbaI TGATCA 2 cut(s) 771, 1102
FblI GTMKAC 1 cut(s) 31
Fnu4HI GCNGC 4 cut(s) 254, 456, 882, 989
FokI GGATG 2 cut(s) 769, 1111
Fsp4HI GCNGC 4 cut(s) 254, 456, 882, 989
FspBI CTAG 5 cut(s) 294, 581, 944, 1019, 1171
GlaI GCGC 1 cut(s) 942
GluI GCNGC 4 cut(s) 254, 456, 882, 989
GsuI CTGGAG 1 cut(s) 747
HaeII RGCGCY 1 cut(s) 944
HaeIII GGCC 2 cut(s) 728, 991
HapII CCGG 4 cut(s) 115, 282, 473, 923
HgaI GACGC 1 cut(s) 721
HhaI GCGC 1 cut(s) 943
Hin1I GRCGYC 1 cut(s) 1061
Hin1II CATG 4 cut(s) 207, 502, 742, 868
Hin6I GCGC 1 cut(s) 941
HinP1I GCGC 1 cut(s) 941
HincII GTYRAC 1 cut(s) 935
HindII GTYRAC 1 cut(s) 935
HindIII AAGCTT 2 cut(s) 210, 380
HinfI GANTC 4 cut(s) 164, 185, 868, 976
HpaII CCGG 4 cut(s) 115, 282, 473, 923
HphI GGTGA 5 cut(s) 355, 422, 829, 1097, 1128
Hpy166II GTNNAC 3 cut(s) 32, 478, 935
Hpy188I TCNGA 5 cut(s) 190, 266, 403, 518, 973
Hpy8I GTNNAC 3 cut(s) 32, 478, 935
Hpy99I CGWCG 3 cut(s) 668, 985, 1034
HpyAV CCTTC 1 cut(s) 1040
HpyCH4III ACNGT 3 cut(s) 158, 393, 565
HpyCH4IV ACGT 3 cut(s) 34, 195, 1061
HpyCH4V TGCA 6 cut(s) 122, 462, 483, 686, 720, 877
HpyF10VI GCNNNNNNNGC 3 cut(s) 284, 547, 887
HpyF3I CTNAG 3 cut(s) 44, 378, 569
HpySE526I ACGT 3 cut(s) 34, 195, 1061
Hsp92I GRCGYC 1 cut(s) 1061
Hsp92II CATG 4 cut(s) 207, 502, 742, 868
HspAI GCGC 1 cut(s) 941
Kpn2I TCCGGA 1 cut(s) 281
KroI GCCGGC 1 cut(s) 922
KroNI GCCGGC 1 cut(s) 924
Ksp22I TGATCA 2 cut(s) 771, 1102
Kzo9I GATC 8 cut(s) 47, 177, 244, 309, 348, 555, 771, 1102
LmnI GCTCC 2 cut(s) 284, 766
Lsp1109I GCAGC 1 cut(s) 265
LweI GCATC 1 cut(s) 828
MaeI CTAG 5 cut(s) 294, 581, 944, 1019, 1171
MaeII ACGT 3 cut(s) 34, 195, 1061
MaeIII GTNAC 5 cut(s) 89, 501, 734, 1062, 1120
MalI GATC 8 cut(s) 49, 179, 246, 311, 350, 557, 773, 1104
MboI GATC 8 cut(s) 47, 177, 244, 309, 348, 555, 771, 1102
MboII GAAGA 8 cut(s) 90, 154, 157, 349, 377, 599, 1093, 1137
MflI RGATCY 4 cut(s) 47, 244, 309, 348
MhlI GDGCHC 1 cut(s) 289
MluCI AATT 4 cut(s) 53, 79, 272, 649
MlyI GAGTC 2 cut(s) 194, 862
MmeI TCCRAC 1 cut(s) 669
MroI TCCGGA 1 cut(s) 281
MroNI GCCGGC 1 cut(s) 922
MseI TTAA 3 cut(s) 396, 678, 1110
MspI CCGG 4 cut(s) 115, 282, 473, 923
Mva1269I GAATGC 1 cut(s) 884
MvnI CGCG 1 cut(s) 845
MwoI GCNNNNNNNGC 3 cut(s) 284, 547, 887
NaeI GCCGGC 1 cut(s) 924
NdeII GATC 8 cut(s) 47, 177, 244, 309, 348, 555, 771, 1102
NgoMIV GCCGGC 1 cut(s) 922
NheI GCTAGC 1 cut(s) 943
NlaIII CATG 4 cut(s) 207, 502, 742, 868
NlaIV GGNNCC 2 cut(s) 350, 762
NmuCI GTSAC 3 cut(s) 501, 1062, 1120
NspI RCATGY 1 cut(s) 502
PaeR7I CTCGAG 1 cut(s) 182
PciI ACATGT 1 cut(s) 498
PctI GAATGC 1 cut(s) 884
PdiI GCCGGC 1 cut(s) 924
PfeI GAWTC 2 cut(s) 164, 976
PinAI ACCGGT 1 cut(s) 114
PkrI GCNGC 4 cut(s) 255, 457, 883, 990
Ple19I CGATCG 1 cut(s) 558
PleI GAGTC 2 cut(s) 193, 862
PpsI GAGTC 2 cut(s) 193, 862
PscI ACATGT 1 cut(s) 498
PsiI TTATAA 1 cut(s) 488
PspN4I GGNNCC 2 cut(s) 350, 762
PspPI GGNCC 1 cut(s) 237
PspXI VCTCGAGB 1 cut(s) 182
PstNI CAGNNNCTG 1 cut(s) 896
PsuI RGATCY 4 cut(s) 47, 244, 309, 348
PvuI CGATCG 1 cut(s) 558
RsaI GTAC 5 cut(s) 479, 497, 524, 567, 1028
RsaNI GTAC 5 cut(s) 478, 496, 523, 566, 1027
SaqAI TTAA 3 cut(s) 396, 678, 1110
SatI GCNGC 4 cut(s) 254, 456, 882, 989
Sau3AI GATC 8 cut(s) 47, 177, 244, 309, 348, 555, 771, 1102
Sau96I GGNCC 1 cut(s) 237
SchI GAGTC 2 cut(s) 194, 862
SduI GDGCHC 1 cut(s) 289
SfaNI GCATC 1 cut(s) 828
Sfr274I CTCGAG 1 cut(s) 182
SgrAI CRCCGGYG 1 cut(s) 472
SinI GGWCC 1 cut(s) 237
SlaI CTCGAG 1 cut(s) 182
SmlI CTYRAG 3 cut(s) 182, 589, 707
SmoI CTYRAG 3 cut(s) 182, 589, 707
Sse9I AATT 4 cut(s) 53, 79, 272, 649
SsiI CCGC 7 cut(s) 240, 455, 470, 843, 882, 988, 1013
SspMI CTAG 5 cut(s) 294, 581, 944, 1019, 1171
StyI CCWWGG 2 cut(s) 729, 859
TaaI ACNGT 3 cut(s) 158, 393, 565
TaiI ACGT 3 cut(s) 37, 198, 1064
TaqI TCGA 6 cut(s) 173, 183, 554, 558, 801, 983
TasI AATT 4 cut(s) 53, 79, 272, 649
TatI WGTACW 2 cut(s) 477, 495
TauI GCSGC 3 cut(s) 458, 884, 991
TfiI GAWTC 2 cut(s) 164, 976
Tru1I TTAA 3 cut(s) 396, 678, 1110
Tru9I TTAA 3 cut(s) 396, 678, 1110
TseFI GTSAC 3 cut(s) 501, 1062, 1120
TseI GCWGC 1 cut(s) 253
Tsp45I GTSAC 3 cut(s) 501, 1062, 1120
TspDTI ATGAA 1 cut(s) 439
TspGWI ACGGA 3 cut(s) 12, 843, 969
VpaK11BI GGWCC 1 cut(s) 237
XapI RAATTY 2 cut(s) 79, 272
XbaI TCTAGA 2 cut(s) 293, 580
XceI RCATGY 1 cut(s) 502
XcmI CCANNNNNNNNNTGG 1 cut(s) 736
XhoI CTCGAG 1 cut(s) 182
XmiI GTMKAC 1 cut(s) 31
XspI CTAG 5 cut(s) 294, 581, 944, 1019, 1171
ZraI GACGTC 1 cut(s) 1062
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.