FvH4_3g01140

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
560225 .. 562805
2581 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g01140.t1

Sequence Viewer

Length: 1125 bp
ATGGCGACCTCATGTTTCCATTCACTTCGTCTCCGAAAGTCGAAGGGCAAGTCGTTGCCAAATCCGTCGTCGTCTTCGAAATACCAGTACAATTCAGACATGGACAACATGGAGAGGAAGAGATTTGATAGCTTGGAGTCATGGTCTATGATATTGGAGTCGGAAAATGTGGAGACTTGGGAGGTGGCCAAGGAGGACCAGGAGGAGTGGACTGCTGATCTTTCTCAGCTGTTCATTGGTAACAAATTTGCTTCAGGAGCACACAGTCGGATTTACCGTGGGATTTACAAGCAGAGAGCTGTTGCTGTGAAAATGGTGAGGATTCCAAACCAGAGGGAGGAGACCAGAACCTTACTTGAGCAGCAATTCAAGTCTGAAGTTGCTCTACTTTCGCGGCTCTTTCATCCCAACATAGTGCAGTTTCTTGCAGCTTGTAAAAAGCCACCTGTGTACTGTATCATCACAGAGTATATGTCACAAGGAACATTGAGGATGTATCTCAACAAGAAAGAGCCATATTCGCTTTCGACAGAGACGATTCTGAGGTTAGCGCTTGACATATCCCGGGGAATGGAGTATCTTCATTCTCAAGGTGTGATCCATAGAGACCTAAAGTCAAATAACTTGCTACTCAATGATGATATGAGGGTGAAGGTGGCAGATTTTGGCACATCGTGCCTTGAAACACAGTGCCAGGAGACGAAAGGAAACAAGGGGACTTATCGCTGGATGGCGCCAGAGATGATCAAGGAGAAACCTTGTTCTAGGAAAGTTGATGTTTATAGCTTTGGGATTGTGCTGTGGGAGCTGACAACATCTTTGCTTCCTTTTCAAGGAATGACTCCTGTGCAGGCTGCATTTGCTGTGGCTGAGAAGAATGAACGGCCTCCACTGCCGGCGAGTTGTCAACCAGCACTTGCACACCTCATCAAGCGCTGTTGGGCACCGAACCCCTCGAAGCGACCAGATTTTAGCGACATTGTGTCTGCTTTGGAGAAGTATGATGAGTGTGTGAAGGAAGGTCTTCCTCTCACACATCACTCGAGGCTGGTAAGTCGAAATGCCATCCTCGAACGCTTGAAAGGTTGTGTATCCTTGAGCTCTTCCATACCTGTACATGCCTGA

Protein Analysis

375

Amino Acids

42.66

Weight (kDa)

8.96

Isoelectric Point (pI)

46.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 80 - 331 5.7e-66 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 85 - 328 3.8e-55 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014397)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62400
fragaria_vesca FvH4_3g01140
malus_domestica MD05G1356400.v1.1 MD10G1329500.v1.1
prunus_persica Prupe.4G012600_v2.0.a1
pyrus_communis pycom10g27930
rosa_chinensis RchiOBHm_Chr5g0001701
rosa_laevigata RLG00000030960
rosa_multiflora Rmu_ssc0000237.1_g000023
rosa_roxburghii Rroxscaffold_1G00071160 Rroxscaffold_1G00074620
rosa_rugosa Rorug04G0392000
rosa_samantha Rh5AG013400 Rh5BG016800 Rh5CG014400 Rh5DG014800
rosa_wichuraiana Rw5G001300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 733, 943
AccII CGCG 1 cut(s) 394
AciI CCGC 1 cut(s) 394
AclWI GGATC 1 cut(s) 592
AcoI YGGCCR 1 cut(s) 186
AcsI RAATTY 1 cut(s) 245
AcuI CTGAAG 2 cut(s) 237, 396
AcyI GRCGYC 1 cut(s) 734
AdeI CACNNNGTG 1 cut(s) 675
AfaI GTAC 3 cut(s) 89, 452, 1116
AfeI AGCGCT 2 cut(s) 552, 935
AfiI CCNNNNNNNGG 3 cut(s) 337, 571, 833
AgsI TTSAA 4 cut(s) 370, 683, 833, 1081
AhdI GACNNNNNGTC 2 cut(s) 613, 982
AjnI CCWGG 2 cut(s) 198, 693
AluBI AGCT 7 cut(s) 132, 229, 299, 431, 786, 808, 1101
AluI AGCT 7 cut(s) 132, 229, 299, 431, 786, 808, 1101
Alw21I GWGCWC 2 cut(s) 262, 1103
Alw26I GTCTC 6 cut(s) 35, 167, 335, 527, 600, 692
AlwI GGATC 1 cut(s) 592
Ama87I CYCGRG 2 cut(s) 564, 1042
Aor51HI AGCGCT 2 cut(s) 552, 935
AoxI GGCC 2 cut(s) 186, 884
ApeKI GCWGC 3 cut(s) 361, 428, 854
ApoI RAATTY 1 cut(s) 245
ArsI GACNNNNNNTTYG 6 cut(s) 35, 53, 67, 85, 802, 834
Asp700I GAANNNNTTC 1 cut(s) 1023
AspLEI GCGC 3 cut(s) 553, 736, 936
AspS9I GGNCC 1 cut(s) 196
AsuC2I CCSGG 2 cut(s) 565, 566
AsuHPI GGTGA 2 cut(s) 328, 661
AsuII TTCGAA 1 cut(s) 77
AvaI CYCGRG 2 cut(s) 564, 1042
AvaII GGWCC 1 cut(s) 196
BaeGI GKGCMC 1 cut(s) 946
BalI TGGCCA 1 cut(s) 188
BanI GGYRCC 2 cut(s) 733, 943
BanII GRGCYC 1 cut(s) 1103
BarI GAAGNNNNNNTAC 2 cut(s) 369, 401
BbsI GAAGAC 2 cut(s) 66, 1016
Bbv12I GWGCWC 2 cut(s) 262, 1103
BbvI GCAGC 3 cut(s) 373, 440, 841
BccI CCATC 2 cut(s) 724, 1073
BceAI ACGGC 1 cut(s) 899
BciT130I CCWGG 2 cut(s) 200, 695
BciVI GTATCC 1 cut(s) 1102
BclI TGATCA 1 cut(s) 744
BcnI CCSGG 2 cut(s) 565, 566
BcoDI GTCTC 6 cut(s) 35, 167, 335, 527, 600, 692
BfaI CTAG 1 cut(s) 765
BfoI RGCGCY 3 cut(s) 554, 737, 937
BfuI GTATCC 1 cut(s) 1102
BisI GCNGC 4 cut(s) 362, 395, 429, 855
BlsI GCNGC 4 cut(s) 363, 396, 430, 856
Bme1390I CCNGG 4 cut(s) 200, 565, 566, 695
Bme18I GGWCC 1 cut(s) 196
BmeRI GACNNNNNGTC 2 cut(s) 613, 982
BmeT110I CYCGRG 2 cut(s) 564, 1042
BmgT120I GGNCC 1 cut(s) 196
BmiI GGNNCC 2 cut(s) 735, 945
BmrFI CCNGG 4 cut(s) 200, 565, 566, 695
BpiI GAAGAC 2 cut(s) 66, 1016
Bpu14I TTCGAA 1 cut(s) 77
BpuEI CTTGAG 3 cut(s) 377, 573, 1117
BpuMI CCSGG 2 cut(s) 565, 566
BsaHI GRCGYC 1 cut(s) 734
BsaI GGTCTC 2 cut(s) 335, 600
BsaJI CCNNGG 4 cut(s) 189, 277, 564, 565
BsaXI ACNNNNNCTCC 4 cut(s) 15, 45, 128, 158
Bsc4I CCNNNNNNNGG 3 cut(s) 337, 571, 833
Bse118I RCCGGY 1 cut(s) 895
Bse1I ACTGG 1 cut(s) 85
BseBI CCWGG 2 cut(s) 200, 695
BseDI CCNNGG 4 cut(s) 189, 277, 564, 565
BseGI GGATG 4 cut(s) 403, 498, 735, 1065
BseLI CCNNNNNNNGG 3 cut(s) 337, 571, 833
BseMII CTCAG 3 cut(s) 239, 533, 861
BseNI ACTGG 1 cut(s) 85
BseRI GAGGAG 2 cut(s) 218, 353
BseSI GKGCMC 1 cut(s) 946
BseXI GCAGC 3 cut(s) 373, 440, 841
BsgI GTGCAG 2 cut(s) 437, 869
Bsh1236I CGCG 1 cut(s) 394
BshFI GGCC 2 cut(s) 188, 886
BshNI GGYRCC 2 cut(s) 733, 943
BsiHKAI GWGCWC 2 cut(s) 262, 1103
BsiHKCI CYCGRG 2 cut(s) 564, 1042
BsiSI CCGG 2 cut(s) 565, 896
BslFI GGGAC 1 cut(s) 730
BslI CCNNNNNNNGG 3 cut(s) 337, 571, 833
BsmAI GTCTC 6 cut(s) 35, 167, 335, 527, 600, 692
BsmBI CGTCTC 3 cut(s) 35, 527, 692
BsmFI GGGAC 1 cut(s) 730
BsnI GGCC 2 cut(s) 188, 886
Bso31I GGTCTC 2 cut(s) 335, 600
BsoBI CYCGRG 2 cut(s) 564, 1042
Bsp119I TTCGAA 1 cut(s) 77
Bsp1286I GDGCHC 3 cut(s) 262, 946, 1103
Bsp1407I TGTACA 1 cut(s) 1114
Bsp143I GATC 3 cut(s) 217, 597, 744
BspACI CCGC 1 cut(s) 394
BspANI GGCC 2 cut(s) 188, 886
BspCNI CTCAG 3 cut(s) 238, 534, 862
BspFNI CGCG 1 cut(s) 394
BspLI GGNNCC 2 cut(s) 735, 945
BspPI GGATC 1 cut(s) 592
BspQI GCTCTTC 1 cut(s) 1108
BspT104I TTCGAA 1 cut(s) 77
BspT107I GGYRCC 2 cut(s) 733, 943
BspTNI GGTCTC 2 cut(s) 335, 600
BsrFI RCCGGY 1 cut(s) 895
BsrGI TGTACA 1 cut(s) 1114
BsrI ACTGG 1 cut(s) 85
BssAI RCCGGY 1 cut(s) 895
BssECI CCNNGG 4 cut(s) 189, 277, 564, 565
BssMI GATC 3 cut(s) 217, 597, 744
BssNI GRCGYC 1 cut(s) 734
BssT1I CCWWGG 1 cut(s) 189
Bst2UI CCWGG 2 cut(s) 200, 695
Bst4CI ACNGT 4 cut(s) 266, 278, 455, 690
Bst6I CTCTTC 2 cut(s) 113, 1108
BstACI GRCGYC 1 cut(s) 734
BstAPI GCANNNNNTGC 1 cut(s) 675
BstAUI TGTACA 1 cut(s) 1114
BstBI TTCGAA 1 cut(s) 77
BstC8I GCNNGC 2 cut(s) 852, 897
BstDEI CTNAG 3 cut(s) 225, 542, 870
BstDSI CCRYGG 1 cut(s) 277
BstENI CCTNNNNNAGG 1 cut(s) 831
BstF5I GGATG 4 cut(s) 403, 498, 735, 1065
BstFNI CGCG 1 cut(s) 394
BstH2I RGCGCY 3 cut(s) 554, 737, 937
BstHHI GCGC 3 cut(s) 553, 736, 936
BstKTI GATC 3 cut(s) 220, 600, 747
BstMAI GTCTC 6 cut(s) 35, 167, 335, 527, 600, 692
BstMBI GATC 3 cut(s) 217, 597, 744
BstMWI GCNNNNNNNGC 6 cut(s) 257, 520, 675, 805, 860, 892
BstNI CCWGG 2 cut(s) 200, 695
BstNSI RCATGY 1 cut(s) 1121
BstSCI CCNGG 4 cut(s) 198, 563, 564, 693
BstSLI GKGCMC 1 cut(s) 946
BstUI CGCG 1 cut(s) 394
BstV1I GCAGC 3 cut(s) 373, 440, 841
BstV2I GAAGAC 2 cut(s) 66, 1016
BsuI GTATCC 1 cut(s) 1102
BsuRI GGCC 2 cut(s) 188, 886
BtgI CCRYGG 1 cut(s) 277
BtsCI GGATG 4 cut(s) 403, 498, 735, 1065
BtsI GCAGTG 1 cut(s) 890
BtsIMutI CAGTG 2 cut(s) 695, 890
Cac8I GCNNGC 2 cut(s) 852, 897
CfoI GCGC 3 cut(s) 553, 736, 936
Cfr10I RCCGGY 1 cut(s) 895
Cfr13I GGNCC 1 cut(s) 196
Cfr9I CCCGGG 1 cut(s) 564
Csp6I GTAC 3 cut(s) 88, 451, 1115
CviAII CATG 5 cut(s) 12, 100, 109, 141, 1118
CviQI GTAC 3 cut(s) 88, 451, 1115
DdeI CTNAG 3 cut(s) 225, 542, 870
DinI GGCGCC 1 cut(s) 735
DpnI GATC 3 cut(s) 219, 599, 746
DpnII GATC 3 cut(s) 217, 597, 744
DraIII CACNNNGTG 1 cut(s) 675
DriI GACNNNNNGTC 2 cut(s) 613, 982
EaeI YGGCCR 1 cut(s) 186
Eam1104I CTCTTC 2 cut(s) 113, 1108
Eam1105I GACNNNNNGTC 2 cut(s) 613, 982
EarI CTCTTC 2 cut(s) 113, 1108
Ecl136II GAGCTC 1 cut(s) 1101
Eco130I CCWWGG 1 cut(s) 189
Eco24I GRGCYC 1 cut(s) 1103
Eco31I GGTCTC 2 cut(s) 335, 600
Eco47I GGWCC 1 cut(s) 196
Eco47III AGCGCT 2 cut(s) 552, 935
Eco53kI GAGCTC 1 cut(s) 1101
Eco57I CTGAAG 2 cut(s) 237, 396
Eco88I CYCGRG 2 cut(s) 564, 1042
EcoICRI GAGCTC 1 cut(s) 1101
EcoNI CCTNNNNNAGG 1 cut(s) 831
EcoRII CCWGG 2 cut(s) 198, 693
EcoT14I CCWWGG 1 cut(s) 189
EcoT38I GRGCYC 1 cut(s) 1103
EgeI GGCGCC 1 cut(s) 735
EheI GGCGCC 1 cut(s) 735
ErhI CCWWGG 1 cut(s) 189
Esp3I CGTCTC 3 cut(s) 35, 527, 692
FaeI CATG 5 cut(s) 15, 103, 112, 144, 1121
FaqI GGGAC 1 cut(s) 730
FatI CATG 5 cut(s) 11, 99, 108, 140, 1117
FbaI TGATCA 1 cut(s) 744
Fnu4HI GCNGC 4 cut(s) 362, 395, 429, 855
FokI GGATG 4 cut(s) 390, 505, 742, 1052
FriOI GRGCYC 1 cut(s) 1103
Fsp4HI GCNGC 4 cut(s) 362, 395, 429, 855
FspBI CTAG 1 cut(s) 765
GlaI GCGC 3 cut(s) 552, 735, 935
GluI GCNGC 4 cut(s) 362, 395, 429, 855
HaeII RGCGCY 3 cut(s) 554, 737, 937
HaeIII GGCC 2 cut(s) 188, 886
HapII CCGG 2 cut(s) 565, 896
HhaI GCGC 3 cut(s) 553, 736, 936
Hin1I GRCGYC 1 cut(s) 734
Hin1II CATG 5 cut(s) 15, 103, 112, 144, 1121
Hin6I GCGC 3 cut(s) 551, 734, 934
HinP1I GCGC 3 cut(s) 551, 734, 934
HincII GTYRAC 1 cut(s) 908
HindII GTYRAC 1 cut(s) 908
HinfI GANTC 5 cut(s) 137, 158, 322, 538, 841
HpaII CCGG 2 cut(s) 565, 896
HphI GGTGA 2 cut(s) 328, 661
Hpy166II GTNNAC 3 cut(s) 210, 451, 908
Hpy188I TCNGA 6 cut(s) 35, 97, 163, 270, 376, 543
Hpy188III TCNNGA 1 cut(s) 255
Hpy8I GTNNAC 3 cut(s) 210, 451, 908
Hpy99I CGWCG 2 cut(s) 70, 73
HpyAV CCTTC 4 cut(s) 37, 646, 1009, 1013
HpyCH4III ACNGT 4 cut(s) 266, 278, 455, 690
HpyCH4V TGCA 5 cut(s) 418, 428, 850, 857, 920
HpyF10VI GCNNNNNNNGC 6 cut(s) 257, 520, 675, 805, 860, 892
HpyF3I CTNAG 3 cut(s) 225, 542, 870
Hsp92I GRCGYC 1 cut(s) 734
Hsp92II CATG 5 cut(s) 15, 103, 112, 144, 1121
HspAI GCGC 3 cut(s) 551, 734, 934
KasI GGCGCC 1 cut(s) 733
KroI GCCGGC 1 cut(s) 895
KroNI GCCGGC 1 cut(s) 897
Ksp22I TGATCA 1 cut(s) 744
Kzo9I GATC 3 cut(s) 217, 597, 744
LguI GCTCTTC 1 cut(s) 1108
LmnI GCTCC 2 cut(s) 257, 805
Lsp1109I GCAGC 3 cut(s) 373, 440, 841
MaeI CTAG 1 cut(s) 765
MaeIII GTNAC 2 cut(s) 239, 474
MalI GATC 3 cut(s) 219, 599, 746
MboI GATC 3 cut(s) 217, 597, 744
MboII GAAGA 6 cut(s) 66, 130, 572, 886, 1016, 1095
MhlI GDGCHC 3 cut(s) 262, 946, 1103
MlsI TGGCCA 1 cut(s) 188
MluCI AATT 3 cut(s) 91, 245, 365
MluNI TGGCCA 1 cut(s) 188
Mly113I GGCGCC 1 cut(s) 734
MlyI GAGTC 3 cut(s) 146, 167, 835
MmeI TCCRAC 2 cut(s) 141, 248
Mox20I TGGCCA 1 cut(s) 188
MroNI GCCGGC 1 cut(s) 895
MroXI GAANNNNTTC 1 cut(s) 1023
MscI TGGCCA 1 cut(s) 188
Msp20I TGGCCA 1 cut(s) 188
MspA1I CMGCKG 1 cut(s) 229
MspI CCGG 2 cut(s) 565, 896
MspR9I CCNGG 4 cut(s) 200, 565, 566, 695
MvaI CCWGG 2 cut(s) 200, 695
MvnI CGCG 1 cut(s) 394
MwoI GCNNNNNNNGC 6 cut(s) 257, 520, 675, 805, 860, 892
NaeI GCCGGC 1 cut(s) 897
NarI GGCGCC 1 cut(s) 734
NciI CCSGG 2 cut(s) 565, 566
NdeII GATC 3 cut(s) 217, 597, 744
NgoMIV GCCGGC 1 cut(s) 895
NlaIII CATG 5 cut(s) 15, 103, 112, 144, 1121
NlaIV GGNNCC 2 cut(s) 735, 945
NmuCI GTSAC 1 cut(s) 474
NspI RCATGY 1 cut(s) 1121
NspV TTCGAA 1 cut(s) 77
PaeR7I CTCGAG 1 cut(s) 1042
PciSI GCTCTTC 1 cut(s) 1108
PcsI WCGNNNNNNNCGW 3 cut(s) 74, 274, 533
PdiI GCCGGC 1 cut(s) 897
PdmI GAANNNNTTC 1 cut(s) 1023
PfeI GAWTC 2 cut(s) 322, 538
PkrI GCNGC 4 cut(s) 363, 396, 430, 856
PleI GAGTC 3 cut(s) 145, 166, 835
PluTI GGCGCC 1 cut(s) 737
PpsI GAGTC 3 cut(s) 145, 166, 835
Psp124BI GAGCTC 1 cut(s) 1103
Psp6I CCWGG 2 cut(s) 198, 693
PspGI CCWGG 2 cut(s) 198, 693
PspN4I GGNNCC 2 cut(s) 735, 945
PspPI GGNCC 1 cut(s) 196
PspXI VCTCGAGB 1 cut(s) 1042
PvuII CAGCTG 1 cut(s) 229
RsaI GTAC 3 cut(s) 89, 452, 1116
RsaNI GTAC 3 cut(s) 88, 451, 1115
SacI GAGCTC 1 cut(s) 1103
SapI GCTCTTC 1 cut(s) 1108
SatI GCNGC 4 cut(s) 362, 395, 429, 855
Sau3AI GATC 3 cut(s) 217, 597, 744
Sau96I GGNCC 1 cut(s) 196
SchI GAGTC 3 cut(s) 146, 167, 835
ScrFI CCNGG 4 cut(s) 200, 565, 566, 695
SduI GDGCHC 3 cut(s) 262, 946, 1103
SfoI GGCGCC 1 cut(s) 735
Sfr274I CTCGAG 1 cut(s) 1042
SfuI TTCGAA 1 cut(s) 77
SinI GGWCC 1 cut(s) 196
SlaI CTCGAG 1 cut(s) 1042
SmaI CCCGGG 1 cut(s) 566
SmlI CTYRAG 4 cut(s) 356, 588, 1042, 1096
SmoI CTYRAG 4 cut(s) 356, 588, 1042, 1096
Sse9I AATT 3 cut(s) 91, 245, 365
SsiI CCGC 1 cut(s) 394
SspDI GGCGCC 1 cut(s) 733
SspMI CTAG 1 cut(s) 765
SstI GAGCTC 1 cut(s) 1103
StyD4I CCNGG 4 cut(s) 198, 563, 564, 693
StyI CCWWGG 1 cut(s) 189
TaaI ACNGT 4 cut(s) 266, 278, 455, 690
TaqI TCGA 7 cut(s) 41, 77, 527, 956, 1043, 1057, 1071
TasI AATT 3 cut(s) 91, 245, 365
TatI WGTACW 3 cut(s) 87, 450, 1114
TauI GCSGC 1 cut(s) 397
TfiI GAWTC 2 cut(s) 322, 538
TscAI CASTG 2 cut(s) 695, 897
TseFI GTSAC 1 cut(s) 474
TseI GCWGC 3 cut(s) 361, 428, 854
Tsp45I GTSAC 1 cut(s) 474
TspDTI ATGAA 4 cut(s) 223, 392, 572, 894
TspGWI ACGGA 1 cut(s) 54
TspMI CCCGGG 1 cut(s) 564
TspRI CASTG 2 cut(s) 695, 897
VpaK11BI GGWCC 1 cut(s) 196
XagI CCTNNNNNAGG 1 cut(s) 831
XapI RAATTY 1 cut(s) 245
XceI RCATGY 1 cut(s) 1121
XhoI CTCGAG 1 cut(s) 1042
XmaI CCCGGG 1 cut(s) 564
XmnI GAANNNNTTC 1 cut(s) 1023
XspI CTAG 1 cut(s) 765
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.