pycom10g27930

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
28750586 .. 28752287
1702 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g27930.2

Sequence Viewer

Length: 1125 bp
ATGGCGACGTCATGCTTCCATAAGCTCCGTCTGCGAAAGTCGAAGAGCAAACCTTTGCCAAACCCTTCCTCGTCAAAGAAATCCCAGTTCAATTCCGAAATGAACAGCATGGAAAGGAAGAGGTTTGACAGCTTGGATTCATGGTCTATGATACTGGAGTCAGAAAATGTGGAAACTTGGGAGGTTTCAAAGGAGGACCAGGAGGAGTGGACTGCTGATCGATCTCAGCTGTTTATTGGTAACAAGTTTGCGTCTGGTGCGCACAGTAGGATTTATCGTGGAATCTACAAGCAGAGAGCTGTTGCTGTGAAAATGGTGAGGATTCCAAACCAGAGGGAGGAGACCAGAAGCTTACTTGAGCAGCAATTCAAGTCCGAAGTTGCCCTGCTTTCGCGCCTCTTTCATCCCAACATAGTGCAGTTTATTGCAGCTTGTAAAAAGCCTCCTGTGTACTGTATAATCACAGAATATATGTCACAAGGAACATTGAGGATGTATCTCAACAAGAAGGAGCCCTATTCTCTGTCCACAGAAACAATTCTGAGGTTAGCTCTCGACATATCCCGCGGAATGGAGTATCTTCATTCACAAGGGGTGATCCACAGGGACCTCAAATCAAATAACTTGCTTCTGAATGATGATATGAGGGTTAAGGTGGCGGATTTTGGTACATCGTGTCTTGAAACGCAGTGCCAGGAAACCAAGGGAAACAAGGGGACTTATCGTTGGATGGCACCGGAGATGATCAAGGAGAAACCTTGTTCTCGGAAGGTTGATGTTTACAGTTTCGGGATTGTGCTATGGGAGCTGACAACAGCTTTGCTTCCCTTCCAAGGAATGACCCCTGTGCAGGCTGCATTTGCTGTGGCTGAGAAGAATGAACGGCCTCCAATGCCGGCTAGTTGTCAACCGGCACTGGCACACCTGATCAAGCGCTGCTGGGCGGAAAACCCTGCGAAGCGGCCAGATTTCAGCAATATTGTGTCTACTTTGGAGAAGTATGATGAGTGTGTGAAGGAGGGTCTTCCTCTCACGCACCACTCCGGATTGGTAAGCAGAAATGTAATTCTTGAACGTTTGAAAGGCTGTGTATCCTTGAGCTCCTCCGTAACTGTACAGGCCTGA

Protein Analysis

375

Amino Acids

42.67

Weight (kDa)

9.17

Isoelectric Point (pI)

49.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014397)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62400
fragaria_vesca FvH4_3g01140
malus_domestica MD05G1356400.v1.1 MD10G1329500.v1.1
prunus_persica Prupe.4G012600_v2.0.a1
pyrus_communis pycom10g27930
rosa_chinensis RchiOBHm_Chr5g0001701
rosa_laevigata RLG00000030960
rosa_multiflora Rmu_ssc0000237.1_g000023
rosa_roxburghii Rroxscaffold_1G00071160 Rroxscaffold_1G00074620
rosa_rugosa Rorug04G0392000
rosa_samantha Rh5AG013400 Rh5BG016800 Rh5CG014400 Rh5DG014800
rosa_wichuraiana Rw5G001300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 11
Acc16I TGCGCA 1 cut(s) 261
AccB1I GGYRCC 1 cut(s) 733
AccI GTMKAC 1 cut(s) 986
AccII CGCG 2 cut(s) 394, 567
AccIII TCCGGA 1 cut(s) 1043
AciI CCGC 5 cut(s) 565, 567, 659, 944, 961
AclI AACGTT 1 cut(s) 1075
AclWI GGATC 1 cut(s) 592
AcoI YGGCCR 1 cut(s) 962
AcyI GRCGYC 1 cut(s) 8
AfaI GTAC 3 cut(s) 452, 670, 1116
AfeI AGCGCT 1 cut(s) 935
AfiI CCNNNNNNNGG 4 cut(s) 337, 571, 833, 850
AgsI TTSAA 6 cut(s) 91, 189, 370, 683, 1073, 1081
AjnI CCWGG 2 cut(s) 198, 693
Alw21I GWGCWC 1 cut(s) 1103
Alw26I GTCTC 1 cut(s) 335
AlwI GGATC 1 cut(s) 592
Aor13HI TCCGGA 1 cut(s) 1043
Aor51HI AGCGCT 1 cut(s) 935
AoxI GGCC 3 cut(s) 884, 962, 1119
ApeKI GCWGC 4 cut(s) 361, 428, 854, 936
ArsI GACNNNNNNTTYG 2 cut(s) 802, 834
Asp700I GAANNNNTTC 1 cut(s) 537
AspLEI GCGC 3 cut(s) 262, 396, 936
AspS9I GGNCC 2 cut(s) 196, 607
AsuHPI GGTGA 2 cut(s) 328, 607
AvaII GGWCC 2 cut(s) 196, 607
BaeI ACNNNNGTAYC 2 cut(s) 143, 176
BanI GGYRCC 1 cut(s) 733
BanII GRGCYC 2 cut(s) 516, 1103
BbsI GAAGAC 1 cut(s) 1016
Bbv12I GWGCWC 1 cut(s) 1103
BbvI GCAGC 4 cut(s) 373, 440, 841, 923
BccI CCATC 1 cut(s) 724
BceAI ACGGC 1 cut(s) 899
BciT130I CCWGG 2 cut(s) 200, 695
BciVI GTATCC 1 cut(s) 1102
BclI TGATCA 2 cut(s) 744, 927
BcoDI GTCTC 1 cut(s) 335
BfaI CTAG 1 cut(s) 900
BfoI RGCGCY 1 cut(s) 937
BfuI GTATCC 1 cut(s) 1102
BisI GCNGC 5 cut(s) 362, 429, 855, 937, 962
BlsI GCNGC 5 cut(s) 363, 430, 856, 938, 963
Bme1390I CCNGG 2 cut(s) 200, 695
Bme18I GGWCC 2 cut(s) 196, 607
BmgT120I GGNCC 2 cut(s) 196, 607
BmiI GGNNCC 3 cut(s) 513, 608, 735
BmrFI CCNGG 2 cut(s) 200, 695
BmrI ACTGGG 1 cut(s) 79
BmuI ACTGGG 1 cut(s) 79
BpiI GAAGAC 1 cut(s) 1016
BplI GAGNNNNNCTC 2 cut(s) 535, 567
BpmI CTGGAG 1 cut(s) 176
BpuEI CTTGAG 2 cut(s) 377, 1117
Bsa29I ATCGAT 1 cut(s) 220
BsaHI GRCGYC 1 cut(s) 8
BsaI GGTCTC 1 cut(s) 335
BsaJI CCNNGG 3 cut(s) 565, 702, 832
BsaWI WCCGGW 2 cut(s) 736, 1043
Bsc4I CCNNNNNNNGG 4 cut(s) 337, 571, 833, 850
Bse118I RCCGGY 2 cut(s) 895, 910
Bse1I ACTGG 3 cut(s) 85, 159, 921
BseAI TCCGGA 1 cut(s) 1043
BseBI CCWGG 2 cut(s) 200, 695
BseCI ATCGAT 1 cut(s) 220
BseDI CCNNGG 3 cut(s) 565, 702, 832
BseGI GGATG 3 cut(s) 403, 498, 735
BseLI CCNNNNNNNGG 4 cut(s) 337, 571, 833, 850
BseMII CTCAG 3 cut(s) 239, 533, 861
BseNI ACTGG 3 cut(s) 85, 159, 921
BseRI GAGGAG 3 cut(s) 218, 353, 1093
BseXI GCAGC 4 cut(s) 373, 440, 841, 923
BseYI CCCAGC 1 cut(s) 939
BsgI GTGCAG 2 cut(s) 437, 869
Bsh1236I CGCG 2 cut(s) 394, 567
BshFI GGCC 3 cut(s) 886, 964, 1121
BshNI GGYRCC 1 cut(s) 733
BshVI ATCGAT 1 cut(s) 220
BsiHKAI GWGCWC 1 cut(s) 1103
BsiSI CCGG 4 cut(s) 737, 896, 911, 1044
BslFI GGGAC 2 cut(s) 620, 730
BslI CCNNNNNNNGG 4 cut(s) 337, 571, 833, 850
BsmAI GTCTC 1 cut(s) 335
BsmFI GGGAC 2 cut(s) 620, 730
BsnI GGCC 3 cut(s) 886, 964, 1121
Bso31I GGTCTC 1 cut(s) 335
Bsp1286I GDGCHC 2 cut(s) 516, 1103
Bsp13I TCCGGA 1 cut(s) 1043
Bsp1407I TGTACA 1 cut(s) 1114
Bsp143I GATC 5 cut(s) 217, 221, 597, 744, 927
BspACI CCGC 5 cut(s) 565, 567, 659, 944, 961
BspANI GGCC 3 cut(s) 886, 964, 1121
BspCNI CTCAG 3 cut(s) 238, 534, 862
BspDI ATCGAT 1 cut(s) 220
BspEI TCCGGA 1 cut(s) 1043
BspFNI CGCG 2 cut(s) 394, 567
BspLI GGNNCC 3 cut(s) 513, 608, 735
BspPI GGATC 1 cut(s) 592
BspQI GCTCTTC 1 cut(s) 38
BspT107I GGYRCC 1 cut(s) 733
BspTNI GGTCTC 1 cut(s) 335
BsrFI RCCGGY 2 cut(s) 895, 910
BsrGI TGTACA 1 cut(s) 1114
BsrI ACTGG 3 cut(s) 85, 159, 921
BssAI RCCGGY 2 cut(s) 895, 910
BssECI CCNNGG 3 cut(s) 565, 702, 832
BssMI GATC 5 cut(s) 217, 221, 597, 744, 927
BssNI GRCGYC 1 cut(s) 8
BssT1I CCWWGG 2 cut(s) 702, 832
Bst2UI CCWGG 2 cut(s) 200, 695
Bst4CI ACNGT 4 cut(s) 266, 455, 785, 1114
Bst6I CTCTTC 2 cut(s) 38, 113
BstACI GRCGYC 1 cut(s) 8
BstAUI TGTACA 1 cut(s) 1114
BstC8I GCNNGC 2 cut(s) 852, 897
BstDEI CTNAG 3 cut(s) 225, 542, 870
BstDSI CCRYGG 1 cut(s) 565
BstF5I GGATG 3 cut(s) 403, 498, 735
BstFNI CGCG 2 cut(s) 394, 567
BstH2I RGCGCY 1 cut(s) 937
BstHHI GCGC 3 cut(s) 262, 396, 936
BstKTI GATC 5 cut(s) 220, 224, 600, 747, 930
BstMAI GTCTC 1 cut(s) 335
BstMBI GATC 5 cut(s) 217, 221, 597, 744, 927
BstMWI GCNNNNNNNGC 5 cut(s) 31, 257, 805, 860, 892
BstNI CCWGG 2 cut(s) 200, 695
BstSCI CCNGG 2 cut(s) 198, 693
BstUI CGCG 2 cut(s) 394, 567
BstV1I GCAGC 4 cut(s) 373, 440, 841, 923
BstV2I GAAGAC 1 cut(s) 1016
Bsu15I ATCGAT 1 cut(s) 220
BsuI GTATCC 1 cut(s) 1102
BsuRI GGCC 3 cut(s) 886, 964, 1121
BsuTUI ATCGAT 1 cut(s) 220
BtgI CCRYGG 1 cut(s) 565
BtsCI GGATG 3 cut(s) 403, 498, 735
BtsI GCAGTG 1 cut(s) 695
BtsIMutI CAGTG 2 cut(s) 695, 914
Cac8I GCNNGC 2 cut(s) 852, 897
CfoI GCGC 3 cut(s) 262, 396, 936
Cfr10I RCCGGY 2 cut(s) 895, 910
Cfr13I GGNCC 2 cut(s) 196, 607
Cfr42I CCGCGG 1 cut(s) 568
ClaI ATCGAT 1 cut(s) 220
CseI GACGC 1 cut(s) 240
Csp6I GTAC 3 cut(s) 451, 669, 1115
CviAII CATG 3 cut(s) 12, 109, 141
CviQI GTAC 3 cut(s) 451, 669, 1115
DdeI CTNAG 3 cut(s) 225, 542, 870
DpnI GATC 5 cut(s) 219, 223, 599, 746, 929
DpnII GATC 5 cut(s) 217, 221, 597, 744, 927
EaeI YGGCCR 1 cut(s) 962
Eam1104I CTCTTC 2 cut(s) 38, 113
EarI CTCTTC 2 cut(s) 38, 113
EciI GGCGGA 2 cut(s) 674, 959
Ecl136II GAGCTC 1 cut(s) 1101
Eco130I CCWWGG 2 cut(s) 702, 832
Eco147I AGGCCT 1 cut(s) 1121
Eco24I GRGCYC 2 cut(s) 516, 1103
Eco31I GGTCTC 1 cut(s) 335
Eco47I GGWCC 2 cut(s) 196, 607
Eco47III AGCGCT 1 cut(s) 935
Eco53kI GAGCTC 1 cut(s) 1101
EcoICRI GAGCTC 1 cut(s) 1101
EcoO109I RGGNCCY 1 cut(s) 607
EcoRII CCWGG 2 cut(s) 198, 693
EcoT14I CCWWGG 2 cut(s) 702, 832
EcoT38I GRGCYC 2 cut(s) 516, 1103
ErhI CCWWGG 2 cut(s) 702, 832
FaeI CATG 3 cut(s) 15, 112, 144
FaqI GGGAC 2 cut(s) 620, 730
FatI CATG 3 cut(s) 11, 108, 140
FauI CCCGC 1 cut(s) 572
FbaI TGATCA 2 cut(s) 744, 927
FblI GTMKAC 1 cut(s) 986
Fnu4HI GCNGC 5 cut(s) 362, 429, 855, 937, 962
FokI GGATG 3 cut(s) 390, 505, 742
FriOI GRGCYC 2 cut(s) 516, 1103
Fsp4HI GCNGC 5 cut(s) 362, 429, 855, 937, 962
FspAI RTGCGCAY 1 cut(s) 261
FspBI CTAG 1 cut(s) 900
FspI TGCGCA 1 cut(s) 261
GlaI GCGC 3 cut(s) 261, 395, 935
GluI GCNGC 5 cut(s) 362, 429, 855, 937, 962
GsaI CCCAGC 1 cut(s) 943
GsuI CTGGAG 1 cut(s) 176
HaeII RGCGCY 1 cut(s) 937
HaeIII GGCC 3 cut(s) 886, 964, 1121
HapII CCGG 4 cut(s) 737, 896, 911, 1044
HgaI GACGC 1 cut(s) 240
HhaI GCGC 3 cut(s) 262, 396, 936
Hin1I GRCGYC 1 cut(s) 8
Hin1II CATG 3 cut(s) 15, 112, 144
Hin6I GCGC 3 cut(s) 260, 394, 934
HinP1I GCGC 3 cut(s) 260, 394, 934
HincII GTYRAC 1 cut(s) 908
HindII GTYRAC 1 cut(s) 908
HindIII AAGCTT 1 cut(s) 349
HinfI GANTC 4 cut(s) 137, 158, 282, 322
HpaII CCGG 4 cut(s) 737, 896, 911, 1044
HphI GGTGA 2 cut(s) 328, 607
Hpy166II GTNNAC 6 cut(s) 210, 451, 528, 781, 908, 987
Hpy188I TCNGA 6 cut(s) 97, 163, 376, 543, 633, 768
Hpy188III TCNNGA 5 cut(s) 554, 680, 790, 1044, 1070
Hpy8I GTNNAC 6 cut(s) 210, 451, 528, 781, 908, 987
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 5 cut(s) 75, 502, 763, 838, 1009
HpyCH4III ACNGT 4 cut(s) 266, 455, 785, 1114
HpyCH4IV ACGT 2 cut(s) 8, 1075
HpyCH4V TGCA 4 cut(s) 418, 428, 850, 857
HpyF10VI GCNNNNNNNGC 5 cut(s) 31, 257, 805, 860, 892
HpyF3I CTNAG 3 cut(s) 225, 542, 870
HpySE526I ACGT 2 cut(s) 8, 1075
Hsp92I GRCGYC 1 cut(s) 8
Hsp92II CATG 3 cut(s) 15, 112, 144
HspAI GCGC 3 cut(s) 260, 394, 934
Kpn2I TCCGGA 1 cut(s) 1043
KroI GCCGGC 1 cut(s) 895
KroNI GCCGGC 1 cut(s) 897
Ksp22I TGATCA 2 cut(s) 744, 927
KspI CCGCGG 1 cut(s) 568
Kzo9I GATC 5 cut(s) 217, 221, 597, 744, 927
LguI GCTCTTC 1 cut(s) 38
LmnI GCTCC 4 cut(s) 30, 511, 805, 1106
Lsp1109I GCAGC 4 cut(s) 373, 440, 841, 923
MaeI CTAG 1 cut(s) 900
MaeII ACGT 2 cut(s) 8, 1075
MaeIII GTNAC 3 cut(s) 239, 474, 1108
MalI GATC 5 cut(s) 219, 223, 599, 746, 929
MboI GATC 5 cut(s) 217, 221, 597, 744, 927
MboII GAAGA 5 cut(s) 55, 130, 572, 886, 1016
MhlI GDGCHC 2 cut(s) 516, 1103
MluCI AATT 4 cut(s) 91, 365, 537, 1065
MlyI GAGTC 1 cut(s) 167
MmeI TCCRAC 1 cut(s) 707
MroI TCCGGA 1 cut(s) 1043
MroNI GCCGGC 1 cut(s) 895
MroXI GAANNNNTTC 1 cut(s) 537
MseI TTAA 1 cut(s) 651
MspA1I CMGCKG 2 cut(s) 229, 567
MspI CCGG 4 cut(s) 737, 896, 911, 1044
MspR9I CCNGG 2 cut(s) 200, 695
MvaI CCWGG 2 cut(s) 200, 695
MvnI CGCG 2 cut(s) 394, 567
MwoI GCNNNNNNNGC 5 cut(s) 31, 257, 805, 860, 892
NaeI GCCGGC 1 cut(s) 897
NdeII GATC 5 cut(s) 217, 221, 597, 744, 927
NgoMIV GCCGGC 1 cut(s) 895
NlaIII CATG 3 cut(s) 15, 112, 144
NlaIV GGNNCC 3 cut(s) 513, 608, 735
NmuCI GTSAC 1 cut(s) 474
NsbI TGCGCA 1 cut(s) 261
PceI AGGCCT 1 cut(s) 1121
PciSI GCTCTTC 1 cut(s) 38
PdiI GCCGGC 1 cut(s) 897
PdmI GAANNNNTTC 1 cut(s) 537
PfeI GAWTC 3 cut(s) 137, 282, 322
PkrI GCNGC 5 cut(s) 363, 430, 856, 938, 963
PleI GAGTC 1 cut(s) 166
PpsI GAGTC 1 cut(s) 166
PpuMI RGGWCCY 1 cut(s) 607
Psp124BI GAGCTC 1 cut(s) 1103
Psp1406I AACGTT 1 cut(s) 1075
Psp5II RGGWCCY 1 cut(s) 607
Psp6I CCWGG 2 cut(s) 198, 693
PspFI CCCAGC 1 cut(s) 939
PspGI CCWGG 2 cut(s) 198, 693
PspN4I GGNNCC 3 cut(s) 513, 608, 735
PspPI GGNCC 2 cut(s) 196, 607
PspPPI RGGWCCY 1 cut(s) 607
PvuII CAGCTG 1 cut(s) 229
RsaI GTAC 3 cut(s) 452, 670, 1116
RsaNI GTAC 3 cut(s) 451, 669, 1115
SacI GAGCTC 1 cut(s) 1103
SacII CCGCGG 1 cut(s) 568
SapI GCTCTTC 1 cut(s) 38
SaqAI TTAA 1 cut(s) 651
SatI GCNGC 5 cut(s) 362, 429, 855, 937, 962
Sau3AI GATC 5 cut(s) 217, 221, 597, 744, 927
Sau96I GGNCC 2 cut(s) 196, 607
SchI GAGTC 1 cut(s) 167
ScrFI CCNGG 2 cut(s) 200, 695
SduI GDGCHC 2 cut(s) 516, 1103
Sfr303I CCGCGG 1 cut(s) 568
SgrBI CCGCGG 1 cut(s) 568
SinI GGWCC 2 cut(s) 196, 607
SmlI CTYRAG 2 cut(s) 356, 1096
SmoI CTYRAG 2 cut(s) 356, 1096
Sse9I AATT 4 cut(s) 91, 365, 537, 1065
SseBI AGGCCT 1 cut(s) 1121
SsiI CCGC 5 cut(s) 565, 567, 659, 944, 961
SspI AATATT 1 cut(s) 979
SspMI CTAG 1 cut(s) 900
SstI GAGCTC 1 cut(s) 1103
StuI AGGCCT 1 cut(s) 1121
StyD4I CCNGG 2 cut(s) 198, 693
StyI CCWWGG 2 cut(s) 702, 832
TaaI ACNGT 4 cut(s) 266, 455, 785, 1114
TaiI ACGT 2 cut(s) 11, 1078
TaqI TCGA 3 cut(s) 41, 220, 555
TasI AATT 4 cut(s) 91, 365, 537, 1065
TatI WGTACW 2 cut(s) 450, 1114
TauI GCSGC 1 cut(s) 964
TfiI GAWTC 3 cut(s) 137, 282, 322
Tru1I TTAA 1 cut(s) 651
Tru9I TTAA 1 cut(s) 651
TscAI CASTG 2 cut(s) 695, 921
TseFI GTSAC 1 cut(s) 474
TseI GCWGC 4 cut(s) 361, 428, 854, 936
Tsp45I GTSAC 1 cut(s) 474
TspDTI ATGAA 5 cut(s) 116, 129, 392, 572, 894
TspGWI ACGGA 2 cut(s) 17, 1096
TspRI CASTG 2 cut(s) 695, 921
VpaK11BI GGWCC 2 cut(s) 196, 607
XmiI GTMKAC 1 cut(s) 986
XmnI GAANNNNTTC 1 cut(s) 537
XspI CTAG 1 cut(s) 900
ZraI GACGTC 1 cut(s) 9
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.