AT1G62800

Aspartate aminotransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
23253703 .. 23257546
3844 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G62800.3

Sequence Viewer

Length: 1212 bp
ATGAATTCCATCTTGTCAAGCGTCCTTCCTGCTCCCGAAGATCCTGTTCTCAGTGTAATTTTTGCTTGTAGAGATGATCCTAGTCCGGTTAAGTTGAATTTGAGCGCAGGTACCTATCGAACTGAGGAAGGAAAGCCTCTTGTTCTTGATGTTGTGAGAAGAGCAGAGCAACAGTTAGCCAACGACCTGGACAAGGAATATCTTCCCCTCAATGGACTTCCTGAATTTAATAAATTAAGTACCAAGCTCATCTTAGGTGATGATAGTCCTGCATTGAAAGAGAATAGAGTTGTTACAACCCAATGTTTGTCTGGTACTGGTTCTTTGAGAGTTGGAGCTGAGTTTCTAGCAACACACAACAAAGAAAGTGTCATTTTCGTTCCAAACCCAACGTGGGGGAACCATCCCCGTATTTTTACTTTGGCGGGTTTGTCTGTCCAGTATTTCCGTTATTATGATCCGAAGAGCCGAGGACTCGACTTCAAAGGCATGCTCGAGGATCTTGGCGCTGCACCTCCTGGAGCTATAGTGGTACTTCAAGCTTGTGCGCATAACCCCACAGGAGTTGACCCAACATTCGAACAATGGGAAAAGATTCGACGACTAGTGAGATCGAAAAGCTTATTACCTTTCTTTGATAGTGCATATCAGGGTTTTGCTAGTGGTAGCCTTGACGCAGATGCACAAGCGGTTCGTATGTTTGTAGCCGATGGAGGTGAATGTTTGATAGCTCAAAGTTATGCCAAAAATATGGGCCTTTATGGGGAGCGTATTGGCTCTCTTACGATCGTATGCACATCAGAAGATGTCGCTAAGAAAGTTGAGAACCAAGTGCTACTTGTTGTGAGGCCTATGTATCTTACACCACCTATTCATGGTGCATCTATTGTTGCCACAATTCTAAAAAACAGTGATATGTACAATGACTGGACCATTGAGCTGAAAGGAATGGCTGACCGCATAATTAGCATGCGTCAACAGTTATATGCAGCTCTAGAAGCTAGAGGAACACCTGGTGATTGGAGTCACATTATTAAACATATTGGGATGTTTACTTTTACCGGATTGAGTGAGGAGCAAGTTCGCTTGATGGCCAAAGAATATCACATTTACATGACTTATGATGGGAGGATAAGCATGGCAAGTCTAAGTTCGAAGACAGTGCCTCAACTCGCTGATGCTATACATGCTGTTGTTACTCGCATCGCCTAA

Protein Analysis

403

Amino Acids

44.36

Weight (kDa)

6.1

Isoelectric Point (pI)

45.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 31 - 338 2e-82 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011825)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 549
Acc36I ACCTGC 1 cut(s) 98
Acc65I GGTACC 1 cut(s) 110
AccB1I GGYRCC 1 cut(s) 110
AciI CCGC 3 cut(s) 425, 689, 958
AclWI GGATC 4 cut(s) 35, 71, 452, 507
AcoI YGGCCR 1 cut(s) 1092
AcsI RAATTY 3 cut(s) 4, 97, 224
AdeI CACNNNGTG 1 cut(s) 1016
AfaI GTAC 5 cut(s) 112, 241, 316, 534, 920
AfiI CCNNNNNNNGG 6 cut(s) 193, 212, 394, 395, 763, 875
AgsI TTSAA 4 cut(s) 97, 277, 484, 539
AhlI ACTAGT 1 cut(s) 604
AjnI CCWGG 3 cut(s) 186, 517, 1012
AluBI AGCT 9 cut(s) 247, 338, 524, 542, 621, 731, 940, 992, 1001
AluI AGCT 9 cut(s) 247, 338, 524, 542, 621, 731, 940, 992, 1001
AlwI GGATC 4 cut(s) 35, 71, 452, 507
Ama87I CYCGRG 1 cut(s) 494
AoxI GGCC 3 cut(s) 754, 848, 1092
ApeKI GCWGC 2 cut(s) 509, 989
ApoI RAATTY 3 cut(s) 4, 97, 224
ArsI GACNNNNNNTTYG 4 cut(s) 354, 386, 560, 592
Asp700I GAANNNNTTC 2 cut(s) 201, 594
Asp718I GGTACC 1 cut(s) 110
AspLEI GCGC 3 cut(s) 107, 509, 550
AspS9I GGNCC 2 cut(s) 754, 930
AsuHPI GGTGA 3 cut(s) 269, 728, 1028
AsuII TTCGAA 2 cut(s) 579, 1154
AvaI CYCGRG 1 cut(s) 494
AvaII GGWCC 1 cut(s) 930
BalI TGGCCA 1 cut(s) 1094
BanI GGYRCC 1 cut(s) 110
BbsI GAAGAC 1 cut(s) 1163
BbvI GCAGC 2 cut(s) 496, 1001
BccI CCATC 5 cut(s) 17, 411, 704, 1084, 1118
BcgI CGANNNNNNTGC 2 cut(s) 1144, 1178
BciT130I CCWGG 3 cut(s) 188, 519, 1014
BcuI ACTAGT 1 cut(s) 604
BfaI CTAG 6 cut(s) 81, 347, 605, 660, 995, 1002
BfmI CTRYAG 1 cut(s) 525
BfoI RGCGCY 1 cut(s) 510
BfuAI ACCTGC 1 cut(s) 98
BisI GCNGC 2 cut(s) 510, 990
BlsI GCNGC 2 cut(s) 511, 991
Bme1390I CCNGG 3 cut(s) 188, 519, 1014
Bme18I GGWCC 1 cut(s) 930
BmeT110I CYCGRG 1 cut(s) 494
BmgT120I GGNCC 2 cut(s) 754, 930
BmiI GGNNCC 2 cut(s) 112, 401
BmrFI CCNGG 3 cut(s) 188, 519, 1014
BmsI GCATC 3 cut(s) 670, 890, 1168
BpiI GAAGAC 1 cut(s) 1163
BpmI CTGGAG 1 cut(s) 540
Bpu14I TTCGAA 2 cut(s) 579, 1154
BsaJI CCNNGG 1 cut(s) 469
BsaWI WCCGGW 2 cut(s) 85, 1061
BsaXI ACNNNNNCTCC 2 cut(s) 513, 543
Bsc4I CCNNNNNNNGG 6 cut(s) 193, 212, 394, 395, 763, 875
Bse1I ACTGG 3 cut(s) 322, 439, 932
BseBI CCWGG 3 cut(s) 188, 519, 1014
BseDI CCNNGG 1 cut(s) 469
BseGI GGATG 2 cut(s) 403, 1053
BseLI CCNNNNNNNGG 6 cut(s) 193, 212, 394, 395, 763, 875
BseMII CTCAG 3 cut(s) 64, 114, 330
BseNI ACTGG 3 cut(s) 322, 439, 932
BseRI GAGGAG 1 cut(s) 1088
BseXI GCAGC 2 cut(s) 496, 1001
BsgI GTGCAG 1 cut(s) 495
Bsh1285I CGRYCG 1 cut(s) 789
BshFI GGCC 3 cut(s) 756, 850, 1094
BshNI GGYRCC 1 cut(s) 110
BsiEI CGRYCG 1 cut(s) 789
BsiHKCI CYCGRG 1 cut(s) 494
BsiSI CCGG 2 cut(s) 86, 1062
BslI CCNNNNNNNGG 6 cut(s) 193, 212, 394, 395, 763, 875
BsnI GGCC 3 cut(s) 756, 850, 1094
BsoBI CYCGRG 1 cut(s) 494
Bsp119I TTCGAA 2 cut(s) 579, 1154
Bsp1407I TGTACA 1 cut(s) 918
Bsp143I GATC 6 cut(s) 40, 76, 457, 499, 611, 786
BspACI CCGC 3 cut(s) 425, 689, 958
BspANI GGCC 3 cut(s) 756, 850, 1094
BspCNI CTCAG 3 cut(s) 63, 115, 331
BspLI GGNNCC 2 cut(s) 112, 401
BspMI ACCTGC 1 cut(s) 98
BspPI GGATC 4 cut(s) 35, 71, 452, 507
BspQI GCTCTTC 2 cut(s) 154, 458
BspT104I TTCGAA 2 cut(s) 579, 1154
BspT107I GGYRCC 1 cut(s) 110
BsrGI TGTACA 1 cut(s) 918
BsrI ACTGG 3 cut(s) 322, 439, 932
BssECI CCNNGG 1 cut(s) 469
BssMI GATC 6 cut(s) 40, 76, 457, 499, 611, 786
Bst2UI CCWGG 3 cut(s) 188, 519, 1014
Bst4CI ACNGT 4 cut(s) 174, 911, 981, 1162
Bst6I CTCTTC 2 cut(s) 154, 458
BstAUI TGTACA 1 cut(s) 918
BstBI TTCGAA 2 cut(s) 579, 1154
BstC8I GCNNGC 2 cut(s) 491, 971
BstDEI CTNAG 6 cut(s) 50, 123, 253, 339, 813, 1148
BstENI CCTNNNNNAGG 1 cut(s) 191
BstF5I GGATG 2 cut(s) 403, 1053
BstH2I RGCGCY 1 cut(s) 510
BstHHI GCGC 3 cut(s) 107, 509, 550
BstKTI GATC 6 cut(s) 43, 79, 460, 502, 614, 789
BstMBI GATC 6 cut(s) 40, 76, 457, 499, 611, 786
BstMCI CGRYCG 1 cut(s) 789
BstMWI GCNNNNNNNGC 3 cut(s) 966, 998, 1187
BstNI CCWGG 3 cut(s) 188, 519, 1014
BstNSI RCATGY 3 cut(s) 493, 973, 1190
BstSCI CCNGG 3 cut(s) 186, 517, 1012
BstSFI CTRYAG 1 cut(s) 525
BstV1I GCAGC 2 cut(s) 496, 1001
BstV2I GAAGAC 1 cut(s) 1163
BstX2I RGATCY 2 cut(s) 40, 499
BstXI CCANNNNNNTGG 2 cut(s) 187, 751
BstYI RGATCY 2 cut(s) 40, 499
BsuRI GGCC 3 cut(s) 756, 850, 1094
BtgZI GCGATG 1 cut(s) 1189
BtsCI GGATG 2 cut(s) 403, 1053
BtsIMutI CAGTG 3 cut(s) 58, 916, 1167
BveI ACCTGC 1 cut(s) 98
Cac8I GCNNGC 2 cut(s) 491, 971
CfoI GCGC 3 cut(s) 107, 509, 550
Cfr13I GGNCC 2 cut(s) 754, 930
CseI GACGC 3 cut(s) 10, 683, 962
CsiI ACCWGGT 1 cut(s) 1012
Csp6I GTAC 5 cut(s) 111, 240, 315, 533, 919
CspCI CAANNNNNGTGG 2 cut(s) 547, 582
CviAII CATG 6 cut(s) 490, 875, 970, 1114, 1138, 1187
CviQI GTAC 5 cut(s) 111, 240, 315, 533, 919
DdeI CTNAG 6 cut(s) 50, 123, 253, 339, 813, 1148
DpnI GATC 6 cut(s) 42, 78, 459, 501, 613, 788
DpnII GATC 6 cut(s) 40, 76, 457, 499, 611, 786
DraIII CACNNNGTG 1 cut(s) 1016
EaeI YGGCCR 1 cut(s) 1092
Eam1104I CTCTTC 2 cut(s) 154, 458
EarI CTCTTC 2 cut(s) 154, 458
Eco147I AGGCCT 1 cut(s) 850
Eco47I GGWCC 1 cut(s) 930
Eco88I CYCGRG 1 cut(s) 494
EcoNI CCTNNNNNAGG 1 cut(s) 191
EcoRI GAATTC 1 cut(s) 4
EcoRII CCWGG 3 cut(s) 186, 517, 1012
FaeI CATG 6 cut(s) 493, 878, 973, 1117, 1141, 1190
FalI AAGNNNNNCTT 4 cut(s) 236, 268, 822, 854
FatI CATG 6 cut(s) 489, 874, 969, 1113, 1137, 1186
FauI CCCGC 1 cut(s) 418
Fnu4HI GCNGC 2 cut(s) 510, 990
FokI GGATG 2 cut(s) 390, 1060
Fsp4HI GCNGC 2 cut(s) 510, 990
FspAI RTGCGCAY 1 cut(s) 549
FspBI CTAG 6 cut(s) 81, 347, 605, 660, 995, 1002
FspI TGCGCA 1 cut(s) 549
GlaI GCGC 3 cut(s) 106, 508, 549
GluI GCNGC 2 cut(s) 510, 990
GsuI CTGGAG 1 cut(s) 540
HaeII RGCGCY 1 cut(s) 510
HaeIII GGCC 3 cut(s) 756, 850, 1094
HapII CCGG 2 cut(s) 86, 1062
HgaI GACGC 3 cut(s) 10, 683, 962
HhaI GCGC 3 cut(s) 107, 509, 550
Hin1II CATG 6 cut(s) 493, 878, 973, 1117, 1141, 1190
Hin6I GCGC 3 cut(s) 105, 507, 548
HinP1I GCGC 3 cut(s) 105, 507, 548
HincII GTYRAC 2 cut(s) 568, 977
HindII GTYRAC 2 cut(s) 568, 977
HindIII AAGCTT 2 cut(s) 540, 619
HinfI GANTC 3 cut(s) 474, 595, 1024
HpaII CCGG 2 cut(s) 86, 1062
HphI GGTGA 3 cut(s) 269, 728, 1028
Hpy166II GTNNAC 3 cut(s) 568, 977, 1053
Hpy188I TCNGA 2 cut(s) 462, 802
Hpy188III TCNNGA 4 cut(s) 35, 146, 221, 995
Hpy8I GTNNAC 3 cut(s) 568, 977, 1053
Hpy99I CGWCG 1 cut(s) 603
HpyAV CCTTC 2 cut(s) 35, 122
HpyCH4III ACNGT 4 cut(s) 174, 911, 981, 1162
HpyCH4IV ACGT 1 cut(s) 392
HpyCH4V TGCA 7 cut(s) 272, 512, 644, 683, 795, 881, 989
HpyF10VI GCNNNNNNNGC 3 cut(s) 966, 998, 1187
HpyF3I CTNAG 6 cut(s) 50, 123, 253, 339, 813, 1148
HpySE526I ACGT 1 cut(s) 392
Hsp92II CATG 6 cut(s) 493, 878, 973, 1117, 1141, 1190
HspAI GCGC 3 cut(s) 105, 507, 548
KpnI GGTACC 1 cut(s) 114
Kzo9I GATC 6 cut(s) 40, 76, 457, 499, 611, 786
LguI GCTCTTC 2 cut(s) 154, 458
LmnI GCTCC 5 cut(s) 37, 335, 521, 766, 1075
Lsp1109I GCAGC 2 cut(s) 496, 1001
LweI GCATC 3 cut(s) 670, 890, 1168
MabI ACCWGGT 1 cut(s) 1012
MaeI CTAG 6 cut(s) 81, 347, 605, 660, 995, 1002
MaeII ACGT 1 cut(s) 392
MaeIII GTNAC 3 cut(s) 292, 1025, 1195
MalI GATC 6 cut(s) 42, 78, 459, 501, 613, 788
MboI GATC 6 cut(s) 40, 76, 457, 499, 611, 786
MboII GAAGA 6 cut(s) 50, 171, 194, 475, 815, 1168
MflI RGATCY 2 cut(s) 40, 499
MlsI TGGCCA 1 cut(s) 1094
MluCI AATT 7 cut(s) 4, 57, 97, 224, 233, 897, 963
MluNI TGGCCA 1 cut(s) 1094
MlyI GAGTC 2 cut(s) 468, 1033
MmeI TCCRAC 1 cut(s) 313
Mox20I TGGCCA 1 cut(s) 1094
MroXI GAANNNNTTC 2 cut(s) 201, 594
MscI TGGCCA 1 cut(s) 1094
MseI TTAA 4 cut(s) 90, 228, 236, 1035
MslI CAYNNNNRTG 1 cut(s) 1112
Msp20I TGGCCA 1 cut(s) 1094
MspI CCGG 2 cut(s) 86, 1062
MspR9I CCNGG 3 cut(s) 188, 519, 1014
MvaI CCWGG 3 cut(s) 188, 519, 1014
MwoI GCNNNNNNNGC 3 cut(s) 966, 998, 1187
NdeII GATC 6 cut(s) 40, 76, 457, 499, 611, 786
NlaIII CATG 6 cut(s) 493, 878, 973, 1117, 1141, 1190
NlaIV GGNNCC 2 cut(s) 112, 401
NmeAIII GCCGAG 1 cut(s) 494
NmuCI GTSAC 1 cut(s) 1025
NsbI TGCGCA 1 cut(s) 549
NspI RCATGY 3 cut(s) 493, 973, 1190
NspV TTCGAA 2 cut(s) 579, 1154
PaeI GCATGC 2 cut(s) 493, 973
PaeR7I CTCGAG 1 cut(s) 494
PceI AGGCCT 1 cut(s) 850
PciSI GCTCTTC 2 cut(s) 154, 458
PdmI GAANNNNTTC 2 cut(s) 201, 594
PfeI GAWTC 1 cut(s) 595
PfoI TCCNGGA 1 cut(s) 517
PkrI GCNGC 2 cut(s) 511, 991
Ple19I CGATCG 1 cut(s) 789
PleI GAGTC 2 cut(s) 468, 1032
PpsI GAGTC 2 cut(s) 468, 1032
Psp6I CCWGG 3 cut(s) 186, 517, 1012
PspGI CCWGG 3 cut(s) 186, 517, 1012
PspN4I GGNNCC 2 cut(s) 112, 401
PspPI GGNCC 2 cut(s) 754, 930
PspXI VCTCGAGB 1 cut(s) 494
PsuI RGATCY 2 cut(s) 40, 499
PvuI CGATCG 1 cut(s) 789
RsaI GTAC 5 cut(s) 112, 241, 316, 534, 920
RsaNI GTAC 5 cut(s) 111, 240, 315, 533, 919
RseI CAYNNNNRTG 1 cut(s) 1112
SapI GCTCTTC 2 cut(s) 154, 458
SaqAI TTAA 4 cut(s) 90, 228, 236, 1035
SatI GCNGC 2 cut(s) 510, 990
Sau3AI GATC 6 cut(s) 40, 76, 457, 499, 611, 786
Sau96I GGNCC 2 cut(s) 754, 930
SchI GAGTC 2 cut(s) 468, 1033
ScrFI CCNGG 3 cut(s) 188, 519, 1014
SexAI ACCWGGT 1 cut(s) 1012
SfaNI GCATC 3 cut(s) 670, 890, 1168
SfcI CTRYAG 1 cut(s) 525
Sfr274I CTCGAG 1 cut(s) 494
SfuI TTCGAA 2 cut(s) 579, 1154
SinI GGWCC 1 cut(s) 930
SlaI CTCGAG 1 cut(s) 494
SmiMI CAYNNNNRTG 1 cut(s) 1112
SmlI CTYRAG 1 cut(s) 494
SmoI CTYRAG 1 cut(s) 494
SpeI ACTAGT 1 cut(s) 604
SphI GCATGC 2 cut(s) 493, 973
Sse9I AATT 7 cut(s) 4, 57, 97, 224, 233, 897, 963
SseBI AGGCCT 1 cut(s) 850
SsiI CCGC 3 cut(s) 425, 689, 958
SspMI CTAG 6 cut(s) 81, 347, 605, 660, 995, 1002
StuI AGGCCT 1 cut(s) 850
StyD4I CCNGG 3 cut(s) 186, 517, 1012
TaaI ACNGT 4 cut(s) 174, 911, 981, 1162
TaiI ACGT 1 cut(s) 395
TaqI TCGA 7 cut(s) 118, 477, 495, 579, 598, 614, 1154
TasI AATT 7 cut(s) 4, 57, 97, 224, 233, 897, 963
TatI WGTACW 1 cut(s) 918
TfiI GAWTC 1 cut(s) 595
Tru1I TTAA 4 cut(s) 90, 228, 236, 1035
Tru9I TTAA 4 cut(s) 90, 228, 236, 1035
TscAI CASTG 3 cut(s) 58, 916, 1167
TseFI GTSAC 1 cut(s) 1025
TseI GCWGC 2 cut(s) 509, 989
Tsp45I GTSAC 1 cut(s) 1025
TspDTI ATGAA 2 cut(s) 17, 863
TspGWI ACGGA 1 cut(s) 437
TspRI CASTG 3 cut(s) 58, 916, 1167
VpaK11BI GGWCC 1 cut(s) 930
XagI CCTNNNNNAGG 1 cut(s) 191
XapI RAATTY 3 cut(s) 4, 97, 224
XbaI TCTAGA 1 cut(s) 994
XceI RCATGY 3 cut(s) 493, 973, 1190
XcmI CCANNNNNNNNNTGG 2 cut(s) 308, 390
XhoI CTCGAG 1 cut(s) 494
XmnI GAANNNNTTC 2 cut(s) 201, 594
XspI CTAG 6 cut(s) 81, 347, 605, 660, 995, 1002
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.