FvH4_2g36020

Aspartate aminotransferase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
26459860 .. 26464056
4197 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g36020.t1

Sequence Viewer

Length: 1350 bp
ATGACAGTTTATCTCCGGTTGAGCGTGCCAAACTTCTGCGACACCGAGAGACTTGCCGGTGAAAACCAACTGAAAGACAAAGCTTCTCCGAACTCAAAACTGCCACTTATGGAGTCTCCGGAGCCACAAGACGGCGATTCTGTATTCGCACACATTCCTCATGTTCCTGAAGTCCCAATTTATGCGATGATGGTTGCTTTCAGCAAAGACCCAAGTCCACTCAAGCTGAATTTAGGCATTGGTGTTTATAGAACTGAGGATGGGCAGCCTTTTCAATTGAATGTAGTTAGACGAGTGGAGCGGTTACTAGTTGATGACATGTCCACTTCCAAGGAGTATCTTCCTATTACTGGAATTGCAGAGTTTAATAGATTGAGTGCTAAGCTCATTTTGGGTGCCGACAGCCCTGCTATTAAGGAGAATAGAGTGACTACTGTCCAGTGCTTGTCTGGTAGTGGATCGCTGAGGATTGGAGCTGAGTTTCTAGCAAACCATTACCACCATCATACAGTCTACATGTCCCAGCCAACATATACAGCCCACCCAGTTTTCTTCTCTGCAGCCGGGCTAGCTATCAAGACTTACCGCTACTATGACCCAGGAACATGTGGTCTGGACTTCCAAGGAATGTTAGAAGATCTTTTGTCTGCTCCATCAGGAGCTATTGTGCTTCTCCAAGCATGTGCACATAACCCTACAGGTGTTGATCCAACTCTTCCACAGTGGGAGCAGATTAGGCAGTTGATTAGAGCAAAAGGGTTGTTTCCTTTCTTTGACACTGCTTATCAGGGTCTTGTCAGCGGAAATCTGGATGAGGATGCCCAAGCTATTCGCCTGTTTGTTACTGATGGTGGTGAGTGCCTTGTAGCTCAGTCATATTCTAAGATTATGGGACTTTATGGAGAACGTGTTGGTGCCCTCAGCATTGTTTGCAAGACAGCAGAAGTGGCTAGCCATGTTGAAAGCCAGCTGAAACTTCTGATCCGGCCCATGTATTCTAGCCCACCCATTCATGGGGCATCCATAGCGGCCACTATCTTAAAGGATAGGGATATGTATGAGGAATGGAGTATTGAAGTGAAGGCAATGACTGACCGCCTTATTAGCACGCGCCGACAACTATTTGATGCTCTTCGTGATAGAGGTACTCCTGGGGACTGGGGGCACATTATCAGGCATGGTGGATTGTTTACTTTCTCAGGCTTGAACTCTGAACAAGTCGCCTTCATGAATAAAGAGTACCATATCTACATGCCATCTGATGGGAGGATCAACATGGCAGGTCTAGGTCCGAAGACAGTTCCTTGTCTTGCAGATGCAATACATGCAGCTGTTACCATGGGTGTATAA

Protein Analysis

450

Amino Acids

49.39

Weight (kDa)

5.97

Isoelectric Point (pI)

46.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 75 - 441 1.6e-85 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011825)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1271
AccB1I GGYRCC 2 cut(s) 395, 914
AccB7I CCANNNNNTGG 1 cut(s) 1262
AccBSI CCGCTC 1 cut(s) 301
AccI GTMKAC 1 cut(s) 513
AccII CGCG 1 cut(s) 1111
AccIII TCCGGA 1 cut(s) 118
AciI CCGC 5 cut(s) 301, 586, 801, 1028, 1096
AclWI GGATC 4 cut(s) 466, 701, 976, 1277
AcoI YGGCCR 1 cut(s) 1029
AcsI RAATTY 1 cut(s) 229
AcuI CTGAAG 1 cut(s) 189
AfaI GTAC 2 cut(s) 1147, 1241
AfiI CCNNNNNNNGG 5 cut(s) 131, 350, 1013, 1014, 1262
AflIII ACRYGT 4 cut(s) 318, 516, 605, 907
AgsI TTSAA 5 cut(s) 275, 280, 962, 1076, 1207
AhlI ACTAGT 1 cut(s) 307
AjnI CCWGG 2 cut(s) 598, 1150
Alw21I GWGCWC 1 cut(s) 688
Alw26I GTCTC 2 cut(s) 43, 120
Alw44I GTGCAC 1 cut(s) 684
AlwI GGATC 4 cut(s) 466, 701, 976, 1277
Aor13HI TCCGGA 1 cut(s) 118
AoxI GGCC 2 cut(s) 986, 1029
ApaLI GTGCAC 1 cut(s) 684
ApeKI GCWGC 3 cut(s) 265, 560, 1328
ApoI RAATTY 1 cut(s) 229
AspLEI GCGC 1 cut(s) 1113
AspS9I GGNCC 2 cut(s) 987, 1289
AsuC2I CCSGG 1 cut(s) 565
AsuHPI GGTGA 2 cut(s) 71, 866
AsuNHI GCTAGC 2 cut(s) 568, 950
AvaII GGWCC 1 cut(s) 1289
BaeGI GKGCMC 3 cut(s) 688, 919, 1167
BanI GGYRCC 2 cut(s) 395, 914
BbsI GAAGAC 1 cut(s) 1301
Bbv12I GWGCWC 1 cut(s) 688
BbvCI CCTCAGC 2 cut(s) 464, 920
BbvI GCAGC 3 cut(s) 277, 572, 1340
BccI CCATC 7 cut(s) 184, 254, 510, 661, 842, 1256, 1264
BceAI ACGGC 1 cut(s) 148
BcgI CGANNNNNNTGC 4 cut(s) 35, 69, 389, 423
BciT130I CCWGG 2 cut(s) 600, 1152
BcnI CCSGG 1 cut(s) 565
BcoDI GTCTC 2 cut(s) 43, 120
BcuI ACTAGT 1 cut(s) 307
BfaI CTAG 6 cut(s) 308, 485, 569, 951, 999, 1286
BfmI CTRYAG 2 cut(s) 558, 696
BfuAI ACCTGC 1 cut(s) 1271
BglII AGATCT 1 cut(s) 637
BisI GCNGC 4 cut(s) 266, 561, 1029, 1329
BlpI GCTNAGC 1 cut(s) 381
BlsI GCNGC 4 cut(s) 267, 562, 1030, 1330
Bme1390I CCNGG 3 cut(s) 565, 600, 1152
Bme18I GGWCC 1 cut(s) 1289
BmgT120I GGNCC 2 cut(s) 987, 1289
BmiI GGNNCC 3 cut(s) 123, 397, 916
BmrFI CCNGG 3 cut(s) 565, 600, 1152
BmrI ACTGGG 2 cut(s) 539, 1168
BmsI GCATC 4 cut(s) 808, 1028, 1117, 1306
BmtI GCTAGC 2 cut(s) 572, 954
BmuI ACTGGG 2 cut(s) 539, 1168
BoxI GACNNNNGTC 2 cut(s) 213, 434
BpiI GAAGAC 1 cut(s) 1301
Bpu10I CCTNAGC 2 cut(s) 464, 920
Bpu1102I GCTNAGC 1 cut(s) 381
BpuEI CTTGAG 1 cut(s) 206
BpuMI CCSGG 1 cut(s) 565
BsaJI CCNNGG 5 cut(s) 330, 598, 622, 1151, 1338
BsaWI WCCGGW 2 cut(s) 15, 118
BsaXI ACNNNNNCTCC 4 cut(s) 651, 681, 894, 924
Bsc4I CCNNNNNNNGG 5 cut(s) 131, 350, 1013, 1014, 1262
Bse118I RCCGGY 1 cut(s) 56
Bse1I ACTGG 4 cut(s) 355, 439, 545, 1163
Bse3DI GCAATG 1 cut(s) 1092
BseAI TCCGGA 1 cut(s) 118
BseBI CCWGG 2 cut(s) 600, 1152
BseDI CCNNGG 5 cut(s) 330, 598, 622, 1151, 1338
BseGI GGATG 4 cut(s) 265, 817, 823, 1019
BseLI CCNNNNNNNGG 5 cut(s) 131, 350, 1013, 1014, 1262
BseMI GCAATG 1 cut(s) 1092
BseMII CTCAG 6 cut(s) 246, 455, 468, 884, 934, 1212
BseNI ACTGG 4 cut(s) 355, 439, 545, 1163
BseSI GKGCMC 3 cut(s) 688, 919, 1167
BseXI GCAGC 3 cut(s) 277, 572, 1340
BseYI CCCAGC 1 cut(s) 522
Bsh1236I CGCG 1 cut(s) 1111
BshFI GGCC 2 cut(s) 988, 1031
BshNI GGYRCC 2 cut(s) 395, 914
BsiHKAI GWGCWC 1 cut(s) 688
BsiSI CCGG 5 cut(s) 16, 57, 119, 564, 985
BslFI GGGAC 4 cut(s) 158, 505, 906, 1169
BslI CCNNNNNNNGG 5 cut(s) 131, 350, 1013, 1014, 1262
BsmAI GTCTC 2 cut(s) 43, 120
BsmFI GGGAC 4 cut(s) 158, 505, 906, 1169
BsnI GGCC 2 cut(s) 988, 1031
Bsp1286I GDGCHC 3 cut(s) 688, 919, 1167
Bsp13I TCCGGA 1 cut(s) 118
Bsp143I GATC 5 cut(s) 458, 637, 706, 981, 1269
Bsp1720I GCTNAGC 1 cut(s) 381
Bsp19I CCATGG 1 cut(s) 1338
BspACI CCGC 5 cut(s) 301, 586, 801, 1028, 1096
BspANI GGCC 2 cut(s) 988, 1031
BspCNI CTCAG 6 cut(s) 247, 456, 469, 883, 933, 1211
BspEI TCCGGA 1 cut(s) 118
BspFNI CGCG 1 cut(s) 1111
BspHI TCATGA 1 cut(s) 1227
BspLI GGNNCC 3 cut(s) 123, 397, 916
BspMAI CTGCAG 1 cut(s) 562
BspMI ACCTGC 1 cut(s) 1271
BspOI GCTAGC 2 cut(s) 572, 954
BspPI GGATC 4 cut(s) 466, 701, 976, 1277
BspQI GCTCTTC 1 cut(s) 1137
BspT107I GGYRCC 2 cut(s) 395, 914
BsrBI CCGCTC 1 cut(s) 301
BsrDI GCAATG 1 cut(s) 1092
BsrFI RCCGGY 1 cut(s) 56
BsrI ACTGG 4 cut(s) 355, 439, 545, 1163
BssAI RCCGGY 1 cut(s) 56
BssECI CCNNGG 5 cut(s) 330, 598, 622, 1151, 1338
BssMI GATC 5 cut(s) 458, 637, 706, 981, 1269
BssT1I CCWWGG 3 cut(s) 330, 622, 1338
Bst2UI CCWGG 2 cut(s) 600, 1152
Bst4CI ACNGT 5 cut(s) 7, 436, 511, 723, 1300
Bst6I CTCTTC 2 cut(s) 720, 1137
BstAPI GCANNNNNTGC 2 cut(s) 930, 1325
BstC8I GCNNGC 5 cut(s) 26, 570, 952, 968, 1109
BstDEI CTNAG 8 cut(s) 255, 381, 464, 477, 870, 882, 920, 1198
BstDSI CCRYGG 1 cut(s) 1338
BstF5I GGATG 4 cut(s) 265, 817, 823, 1019
BstFNI CGCG 1 cut(s) 1111
BstHHI GCGC 1 cut(s) 1113
BstKTI GATC 5 cut(s) 461, 640, 709, 984, 1272
BstMAI GTCTC 2 cut(s) 43, 120
BstMBI GATC 5 cut(s) 458, 637, 706, 981, 1269
BstMWI GCNNNNNNNGC 7 cut(s) 569, 736, 930, 947, 1025, 1104, 1325
BstNI CCWGG 2 cut(s) 600, 1152
BstNSI RCATGY 6 cut(s) 322, 520, 609, 684, 1255, 1328
BstPAI GACNNNNGTC 2 cut(s) 213, 434
BstSCI CCNGG 3 cut(s) 563, 598, 1150
BstSFI CTRYAG 2 cut(s) 558, 696
BstSLI GKGCMC 3 cut(s) 688, 919, 1167
BstUI CGCG 1 cut(s) 1111
BstV1I GCAGC 3 cut(s) 277, 572, 1340
BstV2I GAAGAC 1 cut(s) 1301
BstX2I RGATCY 1 cut(s) 637
BstYI RGATCY 1 cut(s) 637
BsuRI GGCC 2 cut(s) 988, 1031
BtgI CCRYGG 1 cut(s) 1338
BtgZI GCGATG 1 cut(s) 200
BtsCI GGATG 4 cut(s) 265, 817, 823, 1019
BtsI GCAGTG 1 cut(s) 777
BtsIMutI CAGTG 3 cut(s) 446, 728, 777
BveI ACCTGC 1 cut(s) 1271
Cac8I GCNNGC 5 cut(s) 26, 570, 952, 968, 1109
CciI TCATGA 1 cut(s) 1227
CfoI GCGC 1 cut(s) 1113
Cfr10I RCCGGY 1 cut(s) 56
Cfr13I GGNCC 2 cut(s) 987, 1289
Csp6I GTAC 2 cut(s) 1146, 1240
CviQI GTAC 2 cut(s) 1146, 1240
DdeI CTNAG 8 cut(s) 255, 381, 464, 477, 870, 882, 920, 1198
DpnI GATC 5 cut(s) 460, 639, 708, 983, 1271
DpnII GATC 5 cut(s) 458, 637, 706, 981, 1269
EaeI YGGCCR 1 cut(s) 1029
Eam1104I CTCTTC 2 cut(s) 720, 1137
EarI CTCTTC 2 cut(s) 720, 1137
Eco130I CCWWGG 3 cut(s) 330, 622, 1338
Eco47I GGWCC 1 cut(s) 1289
Eco57I CTGAAG 1 cut(s) 189
EcoRII CCWGG 2 cut(s) 598, 1150
EcoT14I CCWWGG 3 cut(s) 330, 622, 1338
ErhI CCWWGG 3 cut(s) 330, 622, 1338
FaqI GGGAC 4 cut(s) 158, 505, 906, 1169
FblI GTMKAC 1 cut(s) 513
Fnu4HI GCNGC 4 cut(s) 266, 561, 1029, 1329
FokI GGATG 4 cut(s) 272, 824, 830, 1006
Fsp4HI GCNGC 4 cut(s) 266, 561, 1029, 1329
FspBI CTAG 6 cut(s) 308, 485, 569, 951, 999, 1286
GlaI GCGC 1 cut(s) 1112
GluI GCNGC 4 cut(s) 266, 561, 1029, 1329
GsaI CCCAGC 1 cut(s) 526
HaeIII GGCC 2 cut(s) 988, 1031
HapII CCGG 5 cut(s) 16, 57, 119, 564, 985
HhaI GCGC 1 cut(s) 1113
Hin6I GCGC 1 cut(s) 1111
HinP1I GCGC 1 cut(s) 1111
HindIII AAGCTT 1 cut(s) 81
HinfI GANTC 2 cut(s) 113, 137
HpaII CCGG 5 cut(s) 16, 57, 119, 564, 985
HphI GGTGA 2 cut(s) 71, 866
Hpy166II GTNNAC 5 cut(s) 218, 324, 514, 686, 1191
Hpy188I TCNGA 5 cut(s) 90, 981, 1213, 1261, 1293
Hpy188III TCNNGA 8 cut(s) 119, 167, 577, 614, 657, 809, 1136, 1228
Hpy8I GTNNAC 5 cut(s) 218, 324, 514, 686, 1191
HpyAV CCTTC 2 cut(s) 1075, 1234
HpyCH4III ACNGT 5 cut(s) 7, 436, 511, 723, 1300
HpyCH4IV ACGT 1 cut(s) 907
HpyCH4V TGCA 7 cut(s) 359, 560, 686, 933, 1313, 1319, 1328
HpyF10VI GCNNNNNNNGC 7 cut(s) 569, 736, 930, 947, 1025, 1104, 1325
HpyF3I CTNAG 8 cut(s) 255, 381, 464, 477, 870, 882, 920, 1198
HpySE526I ACGT 1 cut(s) 907
HspAI GCGC 1 cut(s) 1111
Kpn2I TCCGGA 1 cut(s) 118
Kzo9I GATC 5 cut(s) 458, 637, 706, 981, 1269
LguI GCTCTTC 1 cut(s) 1137
LmnI GCTCC 6 cut(s) 121, 298, 473, 655, 659, 727
Lsp1109I GCAGC 3 cut(s) 277, 572, 1340
LweI GCATC 4 cut(s) 808, 1028, 1117, 1306
MaeI CTAG 6 cut(s) 308, 485, 569, 951, 999, 1286
MaeII ACGT 1 cut(s) 907
MaeIII GTNAC 4 cut(s) 303, 427, 841, 1333
MalI GATC 5 cut(s) 460, 639, 708, 983, 1271
MbiI CCGCTC 1 cut(s) 301
MboI GATC 5 cut(s) 458, 637, 706, 981, 1269
MboII GAAGA 6 cut(s) 332, 544, 647, 707, 1124, 1306
MfeI CAATTG 1 cut(s) 275
MflI RGATCY 1 cut(s) 637
MhlI GDGCHC 3 cut(s) 688, 919, 1167
MluCI AATT 4 cut(s) 177, 229, 275, 354
MlyI GAGTC 1 cut(s) 122
MmeI TCCRAC 1 cut(s) 734
MnlI CCTC 8 cut(s) 168, 250, 459, 808, 929, 1054, 1136, 1260
MroI TCCGGA 1 cut(s) 118
MseI TTAA 3 cut(s) 366, 414, 1040
MspA1I CMGCKG 3 cut(s) 801, 970, 1331
MspI CCGG 5 cut(s) 16, 57, 119, 564, 985
MspR9I CCNGG 3 cut(s) 565, 600, 1152
MunI CAATTG 1 cut(s) 275
MvaI CCWGG 2 cut(s) 600, 1152
MvnI CGCG 1 cut(s) 1111
MwoI GCNNNNNNNGC 7 cut(s) 569, 736, 930, 947, 1025, 1104, 1325
NciI CCSGG 1 cut(s) 565
NcoI CCATGG 1 cut(s) 1338
NdeII GATC 5 cut(s) 458, 637, 706, 981, 1269
NheI GCTAGC 2 cut(s) 568, 950
NlaIV GGNNCC 3 cut(s) 123, 397, 916
NmuCI GTSAC 1 cut(s) 427
NspI RCATGY 6 cut(s) 322, 520, 609, 684, 1255, 1328
PagI TCATGA 1 cut(s) 1227
PciI ACATGT 3 cut(s) 318, 516, 605
PciSI GCTCTTC 1 cut(s) 1137
PfeI GAWTC 1 cut(s) 137
PflMI CCANNNNNTGG 1 cut(s) 1262
PkrI GCNGC 4 cut(s) 267, 562, 1030, 1330
PleI GAGTC 1 cut(s) 121
PpsI GAGTC 1 cut(s) 121
PscI ACATGT 3 cut(s) 318, 516, 605
PshAI GACNNNNGTC 2 cut(s) 213, 434
Psp6I CCWGG 2 cut(s) 598, 1150
PspFI CCCAGC 1 cut(s) 522
PspGI CCWGG 2 cut(s) 598, 1150
PspN4I GGNNCC 3 cut(s) 123, 397, 916
PspPI GGNCC 2 cut(s) 987, 1289
PstI CTGCAG 1 cut(s) 562
PsuI RGATCY 1 cut(s) 637
PvuII CAGCTG 2 cut(s) 970, 1331
RsaI GTAC 2 cut(s) 1147, 1241
RsaNI GTAC 2 cut(s) 1146, 1240
SapI GCTCTTC 1 cut(s) 1137
SaqAI TTAA 3 cut(s) 366, 414, 1040
SatI GCNGC 4 cut(s) 266, 561, 1029, 1329
Sau3AI GATC 5 cut(s) 458, 637, 706, 981, 1269
Sau96I GGNCC 2 cut(s) 987, 1289
SchI GAGTC 1 cut(s) 122
ScrFI CCNGG 3 cut(s) 565, 600, 1152
SduI GDGCHC 3 cut(s) 688, 919, 1167
SfaNI GCATC 4 cut(s) 808, 1028, 1117, 1306
SfcI CTRYAG 2 cut(s) 558, 696
SinI GGWCC 1 cut(s) 1289
SmlI CTYRAG 1 cut(s) 221
SmoI CTYRAG 1 cut(s) 221
SpeI ACTAGT 1 cut(s) 307
Sse9I AATT 4 cut(s) 177, 229, 275, 354
SsiI CCGC 5 cut(s) 301, 586, 801, 1028, 1096
SspMI CTAG 6 cut(s) 308, 485, 569, 951, 999, 1286
StyD4I CCNGG 3 cut(s) 563, 598, 1150
StyI CCWWGG 3 cut(s) 330, 622, 1338
TaaI ACNGT 5 cut(s) 7, 436, 511, 723, 1300
TaiI ACGT 1 cut(s) 910
TasI AATT 4 cut(s) 177, 229, 275, 354
TauI GCSGC 1 cut(s) 1031
TfiI GAWTC 1 cut(s) 137
Tru1I TTAA 3 cut(s) 366, 414, 1040
Tru9I TTAA 3 cut(s) 366, 414, 1040
TscAI CASTG 3 cut(s) 446, 728, 784
TseFI GTSAC 1 cut(s) 427
TseI GCWGC 3 cut(s) 265, 560, 1328
Tsp45I GTSAC 1 cut(s) 427
TspDTI ATGAA 3 cut(s) 1001, 1216, 1244
TspRI CASTG 3 cut(s) 446, 728, 784
Van91I CCANNNNNTGG 1 cut(s) 1262
VneI GTGCAC 1 cut(s) 684
VpaK11BI GGWCC 1 cut(s) 1289
XapI RAATTY 1 cut(s) 229
XceI RCATGY 6 cut(s) 322, 520, 609, 684, 1255, 1328
XcmI CCANNNNNNNNNTGG 1 cut(s) 446
XmiI GTMKAC 1 cut(s) 513
XspI CTAG 6 cut(s) 308, 485, 569, 951, 999, 1286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.